View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7291_low_4 (Length: 609)

Name: NF7291_low_4
Description: NF7291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7291_low_4
NF7291_low_4
[»] chr3 (26 HSPs)
chr3 (132-387)||(21093899-21094153)
chr3 (72-387)||(19978042-19978356)
chr3 (418-511)||(13825658-13825751)
chr3 (151-328)||(10711338-10711516)
chr3 (419-509)||(21287866-21287956)
chr3 (416-512)||(12148780-12148876)
chr3 (419-514)||(4127751-4127846)
chr3 (419-511)||(25874992-25875084)
chr3 (183-313)||(16018457-16018587)
chr3 (148-308)||(21663381-21663541)
chr3 (429-501)||(5294981-5295053)
chr3 (419-510)||(27926909-27927000)
chr3 (429-492)||(36584157-36584220)
chr3 (419-514)||(48251929-48252024)
chr3 (153-225)||(17385501-17385572)
chr3 (267-311)||(17385644-17385688)
chr3 (156-257)||(6809078-6809177)
chr3 (151-207)||(17759890-17759945)
chr3 (419-489)||(29839198-29839268)
chr3 (149-207)||(33370316-33370373)
chr3 (149-207)||(38377268-38377325)
chr3 (281-314)||(2547788-2547821)
chr3 (415-488)||(6418723-6418796)
chr3 (151-208)||(19061209-19061265)
chr3 (419-488)||(26897979-26898048)
chr3 (266-311)||(27050520-27050565)
[»] chr8 (27 HSPs)
chr8 (137-347)||(15062592-15062802)
chr8 (73-295)||(15550223-15550445)
chr8 (424-511)||(7987511-7987598)
chr8 (419-509)||(31005767-31005857)
chr8 (150-328)||(16216541-16216719)
chr8 (440-511)||(7968719-7968790)
chr8 (419-512)||(8227512-8227605)
chr8 (422-511)||(11481187-11481276)
chr8 (235-403)||(24270938-24271101)
chr8 (419-511)||(36583174-36583266)
chr8 (129-258)||(28932803-28932931)
chr8 (19-117)||(15062436-15062536)
chr8 (452-511)||(9765287-9765346)
chr8 (57-162)||(16724537-16724641)
chr8 (22-87)||(16216370-16216436)
chr8 (149-207)||(45560670-45560727)
chr8 (149-204)||(21199628-21199682)
chr8 (149-204)||(23148547-23148601)
chr8 (149-204)||(25294620-25294674)
chr8 (149-204)||(25756609-25756663)
chr8 (149-204)||(31195739-31195793)
chr8 (149-207)||(11543169-11543226)
chr8 (164-214)||(15662365-15662414)
chr8 (419-492)||(6870791-6870864)
chr8 (267-308)||(15932127-15932168)
chr8 (266-314)||(18179093-18179141)
chr8 (151-207)||(19333081-19333136)
[»] chr7 (41 HSPs)
chr7 (129-389)||(17998996-17999256)
chr7 (137-381)||(17492539-17492783)
chr7 (137-381)||(17560431-17560675)
chr7 (129-341)||(33291268-33291478)
chr7 (110-248)||(11621995-11622132)
chr7 (112-313)||(6010558-6010759)
chr7 (416-505)||(38440732-38440821)
chr7 (422-511)||(7766814-7766903)
chr7 (419-509)||(5972731-5972821)
chr7 (150-228)||(14973984-14974062)
chr7 (150-228)||(15403460-15403538)
chr7 (422-511)||(23809963-23810052)
chr7 (419-511)||(11039472-11039564)
chr7 (148-289)||(14279808-14279950)
chr7 (419-512)||(27336693-27336786)
chr7 (419-511)||(33189144-33189236)
chr7 (416-511)||(22519476-22519571)
chr7 (149-203)||(17150889-17150943)
chr7 (436-513)||(1053363-1053440)
chr7 (153-257)||(13487956-13488058)
chr7 (438-511)||(30541766-30541839)
chr7 (73-307)||(19312741-19312961)
chr7 (149-203)||(16175288-16175342)
chr7 (149-310)||(17910631-17910792)
chr7 (550-591)||(8807490-8807531)
chr7 (418-505)||(47924739-47924826)
chr7 (149-207)||(9322517-9322574)
chr7 (151-208)||(16382214-16382270)
chr7 (149-205)||(13388622-13388677)
chr7 (423-510)||(2944355-2944442)
chr7 (136-203)||(6210422-6210488)
chr7 (266-309)||(17150770-17150813)
chr7 (19-57)||(8807427-8807465)
chr7 (453-499)||(15954928-15954974)
chr7 (266-308)||(17225264-17225306)
chr7 (419-509)||(25501894-25501984)
chr7 (149-203)||(26427278-26427331)
chr7 (149-207)||(28719111-28719168)
chr7 (144-204)||(13376323-13376382)
chr7 (449-497)||(31457128-31457176)
chr7 (268-308)||(48354144-48354184)
[»] chr6 (26 HSPs)
chr6 (129-403)||(13122062-13122336)
chr6 (57-313)||(22541953-22542207)
chr6 (152-387)||(15482146-15482385)
chr6 (96-311)||(23090075-23090293)
chr6 (418-513)||(10409217-10409312)
chr6 (419-511)||(7622115-7622207)
chr6 (432-511)||(5999306-5999385)
chr6 (235-326)||(14486981-14487073)
chr6 (419-511)||(32292666-32292758)
chr6 (418-511)||(8576500-8576593)
chr6 (22-124)||(22442588-22442691)
chr6 (137-295)||(23845569-23845727)
chr6 (419-511)||(34435084-34435176)
chr6 (235-303)||(22786217-22786283)
chr6 (267-339)||(14874801-14874873)
chr6 (423-511)||(28581903-28581991)
chr6 (424-511)||(10788326-10788415)
chr6 (151-207)||(16375041-16375096)
chr6 (259-389)||(22457203-22457328)
chr6 (419-511)||(35167997-35168089)
chr6 (266-308)||(25649952-25649994)
chr6 (266-311)||(5485677-5485722)
chr6 (149-205)||(18383139-18383194)
chr6 (158-202)||(19728819-19728862)
chr6 (151-207)||(29161966-29162021)
chr6 (151-207)||(31162344-31162399)
[»] chr2 (24 HSPs)
chr2 (57-295)||(28579259-28579497)
chr2 (129-311)||(23154178-23154362)
chr2 (129-311)||(23565435-23565619)
chr2 (145-310)||(18331709-18331875)
chr2 (164-328)||(39668573-39668737)
chr2 (417-511)||(13807321-13807415)
chr2 (423-510)||(45151508-45151595)
chr2 (419-512)||(42625299-42625391)
chr2 (429-511)||(13626582-13626664)
chr2 (422-511)||(5938489-5938578)
chr2 (419-509)||(5109959-5110048)
chr2 (153-203)||(22576696-22576745)
chr2 (449-510)||(31604613-31604674)
chr2 (149-207)||(24276541-24276598)
chr2 (149-205)||(25304223-25304278)
chr2 (149-205)||(45619497-45619552)
chr2 (149-204)||(22137281-22137335)
chr2 (149-204)||(23822974-23823028)
chr2 (149-204)||(23824918-23824972)
chr2 (149-204)||(23832053-23832107)
chr2 (149-207)||(19434922-19434979)
chr2 (149-207)||(24562326-24562383)
chr2 (463-511)||(5704398-5704446)
chr2 (151-207)||(6093508-6093563)
[»] chr4 (37 HSPs)
chr4 (139-384)||(13908353-13908599)
chr4 (129-388)||(13933404-13933661)
chr4 (137-381)||(1919720-1919964)
chr4 (133-387)||(12407549-12407804)
chr4 (151-389)||(16028583-16028822)
chr4 (22-343)||(12459186-12459512)
chr4 (96-311)||(11923444-11923663)
chr4 (216-399)||(17378595-17378777)
chr4 (420-513)||(51356934-51357027)
chr4 (136-388)||(20847541-20847794)
chr4 (419-492)||(23626606-23626679)
chr4 (419-511)||(41039084-41039176)
chr4 (419-510)||(22278061-22278152)
chr4 (419-511)||(36465098-36465190)
chr4 (423-511)||(8819586-8819674)
chr4 (419-510)||(42555082-42555171)
chr4 (439-510)||(19841513-19841584)
chr4 (110-229)||(20881701-20881820)
chr4 (419-492)||(40715150-40715223)
chr4 (429-489)||(24912927-24912987)
chr4 (429-489)||(24916611-24916671)
chr4 (149-208)||(19557987-19558045)
chr4 (149-207)||(17376936-17376993)
chr4 (422-492)||(38951375-38951445)
chr4 (416-489)||(42595816-42595889)
chr4 (429-512)||(40572178-40572259)
chr4 (149-204)||(34197625-34197679)
chr4 (149-204)||(37958517-37958571)
chr4 (149-207)||(5372151-5372208)
chr4 (266-308)||(18275617-18275659)
chr4 (149-207)||(24237545-24237602)
chr4 (149-207)||(41257806-41257863)
chr4 (149-207)||(54365027-54365084)
chr4 (19-67)||(12407858-12407907)
chr4 (267-311)||(10115709-10115753)
chr4 (454-514)||(17120565-17120625)
chr4 (266-302)||(38763582-38763618)
[»] scaffold0171 (2 HSPs)
scaffold0171 (22-259)||(3264-3500)
scaffold0171 (293-389)||(3507-3603)
[»] scaffold0086 (1 HSPs)
scaffold0086 (133-314)||(10798-10979)
[»] chr5 (17 HSPs)
chr5 (137-328)||(17301558-17301748)
chr5 (423-511)||(35188881-35188969)
chr5 (432-511)||(42836746-42836825)
chr5 (419-512)||(39800688-39800781)
chr5 (421-511)||(39207383-39207473)
chr5 (434-511)||(3925977-3926054)
chr5 (419-512)||(40056734-40056827)
chr5 (267-328)||(24851792-24851853)
chr5 (419-511)||(23428985-23429077)
chr5 (144-205)||(13793783-13793843)
chr5 (419-493)||(26621224-26621298)
chr5 (149-205)||(19860891-19860946)
chr5 (149-204)||(32967628-32967682)
chr5 (419-511)||(33743005-33743089)
chr5 (149-207)||(24226920-24226977)
chr5 (419-489)||(35505720-35505790)
chr5 (151-207)||(21108213-21108268)
[»] scaffold0070 (1 HSPs)
scaffold0070 (72-315)||(46827-47067)
[»] chr1 (19 HSPs)
chr1 (419-511)||(29678603-29678695)
chr1 (419-512)||(25294208-25294301)
chr1 (418-511)||(48379375-48379468)
chr1 (418-492)||(19884710-19884784)
chr1 (434-511)||(47140554-47140631)
chr1 (419-511)||(25987142-25987233)
chr1 (418-511)||(2192071-2192164)
chr1 (418-510)||(17563069-17563161)
chr1 (422-510)||(31585516-31585604)
chr1 (419-511)||(38264606-38264698)
chr1 (429-510)||(31293040-31293121)
chr1 (443-511)||(36729036-36729104)
chr1 (149-205)||(13378216-13378271)
chr1 (443-510)||(11894077-11894144)
chr1 (149-204)||(36357793-36357847)
chr1 (149-207)||(5471836-5471893)
chr1 (266-308)||(17607737-17607779)
chr1 (151-207)||(33396002-33396057)
chr1 (266-302)||(52399427-52399463)
[»] scaffold0115 (1 HSPs)
scaffold0115 (416-512)||(21812-21908)
[»] scaffold0691 (1 HSPs)
scaffold0691 (416-512)||(7665-7761)
[»] scaffold0155 (1 HSPs)
scaffold0155 (419-512)||(7161-7253)
[»] scaffold0057 (1 HSPs)
scaffold0057 (421-510)||(66350-66439)
[»] scaffold0126 (1 HSPs)
scaffold0126 (262-377)||(34157-34271)
[»] scaffold0243 (1 HSPs)
scaffold0243 (149-204)||(3751-3805)
[»] scaffold0138 (1 HSPs)
scaffold0138 (149-204)||(23882-23936)
[»] scaffold0111 (1 HSPs)
scaffold0111 (262-297)||(29079-29114)
[»] scaffold1869 (1 HSPs)
scaffold1869 (153-203)||(955-1004)
[»] scaffold0412 (1 HSPs)
scaffold0412 (153-203)||(1804-1853)
[»] scaffold0357 (1 HSPs)
scaffold0357 (266-308)||(6540-6582)
[»] scaffold0107 (1 HSPs)
scaffold0107 (266-308)||(12238-12280)
[»] scaffold0080 (1 HSPs)
scaffold0080 (149-207)||(25065-25122)
[»] scaffold0031 (1 HSPs)
scaffold0031 (266-308)||(98510-98552)
[»] scaffold0025 (1 HSPs)
scaffold0025 (266-308)||(52096-52138)
[»] scaffold0004 (1 HSPs)
scaffold0004 (149-207)||(85076-85133)
[»] scaffold1204 (1 HSPs)
scaffold1204 (151-207)||(1668-1723)
[»] scaffold0013 (2 HSPs)
scaffold0013 (151-207)||(10817-10872)
scaffold0013 (149-205)||(34127-34182)
[»] scaffold0009 (1 HSPs)
scaffold0009 (160-203)||(221988-222029)


Alignment Details
Target: chr3 (Bit Score: 124; Significance: 2e-63; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 132 - 387
Target Start/End: Complemental strand, 21094153 - 21093899
Alignment:
Q  132 attatgttcttcaccaaaagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaattca-caacactatattatataatc 230  Q
    |||||||||||||||||||||||||| ||||  ||||||||||| |||| ||||||||||||| ||||||||||| ||| |||  |||||||||| |||     
T  21094153 attatgttcttcaccaaaagactcaacatgaacatgaatgcatggactttcaagtaaagactcgacaatgcaaaaatcaccaattctatattatacaatt 21094054  T
Q  231 cagcccatcatataatatcttcaccaaaactcaccattgcatcatcaagcatttacatccatacaa-tcaacaagtcataatcaacgaaagagtcatcaa 329  Q
    ||  ||||||| ||||||||||| ||||| |||||||||||| |||||||||||||||  |||||| |||||||||||||||||   | |||||||||||    
T  21094053 cactccatcatttaatatcttcatcaaaattcaccattgcattatcaagcatttacattgatacaattcaacaagtcataatca---atagagtcatcaa 21093957  T
Q  330 cataatcatcataaacaattatcacaactagaaaacaacatcgtttcacaaagcacaa 387  Q
    |||| ||||||| |||||||||||| || || || |||||||||||||||||||||||    
T  21093956 catattcatcattaacaattatcaccacaaggaagcaacatcgtttcacaaagcacaa 21093899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 72 - 387
Target Start/End: Complemental strand, 19978356 - 19978042
Alignment:
Q  72 aatccactaacgtaatccc-cttcgattacgttcttcatcaactaacataatcctcctccaattatgttcttcaccaaaagactcaatatgactatgaat 170  Q
    ||||||||||||||||  | || ||||||||||||||| ||| ||||||| |    |||| | |||||||||||||||  ||||| | |||||||||||     
T  19978356 aatccactaacgtaatttctctccgattacgttcttcaccaa-taacatagtttctctccgactatgttcttcaccaa--gactcgacatgactatgaag 19978260  T
Q  171 gcatgaacttacaagtaaagactcaacaatgcaaaattcacaacactatattatataatccagcccatcatataatatcttcaccaaaactcaccattgc 270  Q
    ||||| || ||||||||||||| | |||||||| ||    |||  |||||||||| ||  ||  ||||||||||||||||||||||||| |||||||| |    
T  19978259 gcatggacatacaagtaaagacccgacaatgcacaaacaccaattctatattatacaactcactccatcatataatatcttcaccaaaattcaccattac 19978160  T
Q  271 atcatcaagcatttacatccataca-atcaacaagtcataatcaacgaaagagtcatcaacataatcatc-ataaacaattatcacaactagaaaacaac 368  Q
    || ||||||||||||||||||||||  ||||||||||||||| ||  ||||||||||||||||| ||||| || |||| ||| ||| || || ||||||     
T  19978159 attatcaagcatttacatccatacatttcaacaagtcataattaa-taaagagtcatcaacatattcatcaatcaacagttaccaccacaaggaaacaat 19978061  T
Q  369 atcgtttcacaaagcacaa 387  Q
     ||||||||||||||||||    
T  19978060 gtcgtttcacaaagcacaa 19978042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 418 - 511
Target Start/End: Original strand, 13825658 - 13825751
Alignment:
Q  418 atagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    |||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||    
T  13825658 atagggatgtaaatggatatccatggatgcggatagtgtgatatatgtgtccgctccgttagataaatatgaaatccgtaccctatccatatcc 13825751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 151 - 328
Target Start/End: Complemental strand, 10711516 - 10711338
Alignment:
Q  151 gactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaattcac-aacactatattatataatccagcccatcatataatatc 249  Q
    ||||| ||||||| ||||||||||| |||| ||||||||||||| |||||||| |  |||| ||   ||||||||| ||| ||  |||||||||||||||    
T  10711516 gactcgatatgacaatgaatgcatggactttcaagtaaagactcgacaatgcacatatcaccaattatatattatacaattcacaccatcatataatatc 10711417  T
Q  250 ttcaccaaaactcacca-ttgcatcatcaagcatttacatccatacaatcaacaagtcataatcaacgaaagagtcatca 328  Q
    ||||||| |  |||||| |||||| |||||| ||||| ||||| |||||||||||||||||||| || ||||||||||||    
T  10711416 ttcaccatat-tcaccacttgcattatcaagtatttagatccacacaatcaacaagtcataatcgacaaaagagtcatca 10711338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 419 - 509
Target Start/End: Original strand, 21287866 - 21287956
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatat 509  Q
    ||||||||| |||| |||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||| ||| |||||||||||    
T  21287866 tagggatgtaaatggatatccatggatgcagatagtgtgatatctgtgtcccctccgttagataaatatgaaatccgtaccctatccatat 21287956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 416 - 512
Target Start/End: Original strand, 12148780 - 12148876
Alignment:
Q  416 aaatagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcca 512  Q
    |||||||||||| |||  |||||||||||||| |||||||||||||  |||||| ||||||| ||||||||||||||| ||| ||||||||||||||    
T  12148780 aaatagggatgtaaatcgatatccatggatgcggatagtgtgatatccgtgtccactccgttagataaatatgaaatccgtaccctatccatatcca 12148876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 419 - 514
Target Start/End: Original strand, 4127751 - 4127846
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatccacg 514  Q
    ||||||||| |||| |||||||||||||| |||||||||||||  ||||||| |||||||||||||||||||||| | | ||||||||||| ||||    
T  4127751 tagggatgtaaatggatatccatggatgcggatagtgtgatatccgtgtccgttccgttggataaatatgaaatccgaaccctatccatattcacg 4127846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 419 - 511
Target Start/End: Complemental strand, 25875084 - 25874992
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    ||||||||| |||| |||| ||||||||  |||||||||||||  |||||||||||||| |||||| |||||||| ||| |||||||||||||    
T  25875084 tagggatgtaaatggatatacatggatgtggatagtgtgatatccgtgtccgctccgttagataaagatgaaatccgtaccctatccatatcc 25874992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 183 - 313
Target Start/End: Complemental strand, 16018587 - 16018457
Alignment:
Q  183 aagtaaagactcaacaatgcaaaattcacaacactatattatataatccagcccatcatataatatcttcaccaaaactcacca-ttgcatcatcaagca 281  Q
    ||||||| ||||||||||||| || ||||||  |||||||||||||   |  |||||||||||||||||||||||||  ||||| |||||| |||||| |    
T  16018587 aagtaaaaactcaacaatgcacaaatcacaattctatattatataaattacaccatcatataatatcttcaccaaaatccaccatttgcattatcaagta 16018488  T
Q  282 tttacatccatacaatcaacaagtcataatca 313  Q
    |||||||||| || || |||||||||| ||||    
T  16018487 tttacatccacac-ataaacaagtcatcatca 16018457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 148 - 308
Target Start/End: Original strand, 21663381 - 21663541
Alignment:
Q  148 aaagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaattcacaacactatattatataatccagcccatcatataata 247  Q
    |||||||| | ||||| || ||||||| ||| ||||||||||||| | ||||||| | | | ||| || ||||||||||||||||  |||||||||||||    
T  21663381 aaagactcgacatgacaattaatgcataaacatacaagtaaagacccgacaatgcgacaataacatcattatattatataatcca-tccatcatataata 21663479  T
Q  248 tcttca-ccaaaactcaccattgcatcatcaagcatttacatccatacaatcaacaagtcat 308  Q
    |  ||| ||||||  |  |||||||| |||||| ||||||||||| |||||||| |||||||    
T  21663480 ttctcacccaaaatccttcattgcattatcaagaatttacatccacacaatcaaaaagtcat 21663541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 429 - 501
Target Start/End: Original strand, 5294981 - 5295053
Alignment:
Q  429 aatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcct 501  Q
    |||| |||| ||||||||| |||||||||||||  |||||| ||||||| |||||||||||||||| ||||||    
T  5294981 aatggatattcatggatgcggatagtgtgatatccgtgtcccctccgttagataaatatgaaatctatatcct 5295053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 419 - 510
Target Start/End: Complemental strand, 27927000 - 27926909
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatc 510  Q
    ||||||| | |||| |||| |||||||| ||||||||| ||||  |||||||||||||| |||||||||||||| ||||  ||||| |||||    
T  27927000 tagggatataaatggatattcatggatgtagatagtgtcatatccgtgtccgctccgttagataaatatgaaatatgtactctatctatatc 27926909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 429 - 492
Target Start/End: Original strand, 36584157 - 36584220
Alignment:
Q  429 aatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaat 492  Q
    |||| ||||||||||||||||||||| |||||| ||| || ||||| |||||||||||||||||    
T  36584157 aatggatatccatggatgcagatagtatgatatctgtatctgctccattggataaatatgaaat 36584220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 419 - 514
Target Start/End: Complemental strand, 48252024 - 48251929
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatccacg 514  Q
    ||||||||| |||| ||||||||| |||  |||||||||||||   | |||| |||||||||||||||||||||  ||| |||||| |||||||||    
T  48252024 tagggatgtaaatggatatccatgaatgtggatagtgtgatatccatatccgttccgttggataaatatgaaattcgtaccctatcgatatccacg 48251929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 225
Target Start/End: Original strand, 17385501 - 17385572
Alignment:
Q  153 ctcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaattcacaacactatattata 225  Q
    ||||| ||||||||||||||||| ||||| |||||||||||| |||||||| || |||| | |||||||||||    
T  17385501 ctcaacatgactatgaatgcatggactta-aagtaaagactcgacaatgcacaagtcaccaaactatattata 17385572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 311
Target Start/End: Original strand, 17385644 - 17385688
Alignment:
Q  267 ttgcatcatcaagcatttacatccatacaatcaacaagtcataat 311  Q
    |||||| |||||| |||||||||||||||||||||||||||||||    
T  17385644 ttgcattatcaagtatttacatccatacaatcaacaagtcataat 17385688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 156 - 257
Target Start/End: Original strand, 6809078 - 6809177
Alignment:
Q  156 aatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaattcacaacactatattatataatccagcccatcatataatatcttcacc 255  Q
    |||||||||||||||||||| | || || |||||||||| |||||||| || || | | ||||||||||| ||| || |  |||||||||||||||||||    
T  6809078 aatatgactatgaatgcatggaatt-cacgtaaagactcgacaatgcacaactcgccaaactatattatacaattca-cagatcatataatatcttcacc 6809175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 17759945 - 17759890
Alignment:
Q  151 gactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaat 207  Q
    ||||||||||||||||| ||||||| || |||||| |||||||||| ||||||||||    
T  17759945 gactcaatatgactatg-atgcatggacatacaagcaaagactcaataatgcaaaat 17759890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 419 - 489
Target Start/End: Original strand, 29839198 - 29839268
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatga 489  Q
    |||||||||||||| ||| |||||||  | |||||| |||||   ||||||||||||||||||||| ||||    
T  29839198 tagggatgtcaatggatacccatggacacggatagtatgatacccgtgtccgctccgttggataaacatga 29839268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 33370373 - 33370316
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaat 207  Q
    ||||||||| |||||||||| |||||| || |||||| |||||||| ||||||||||||    
T  33370373 aagactcaacatgactatga-tgcatggacatacaagcaaagactcgacaatgcaaaat 33370316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 38377325 - 38377268
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaat 207  Q
    ||||||||| |||||||||| |||||| || |||||| |||||||| ||||||||||||    
T  38377325 aagactcaacatgactatga-tgcatggacatacaagcaaagactcgacaatgcaaaat 38377268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 314
Target Start/End: Complemental strand, 2547821 - 2547788
Alignment:
Q  281 atttacatccatacaatcaacaagtcataatcaa 314  Q
    |||||||||||||||||||||||||||| |||||    
T  2547821 atttacatccatacaatcaacaagtcatcatcaa 2547788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 488
Target Start/End: Original strand, 6418723 - 6418796
Alignment:
Q  415 gaaatagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatg 488  Q
    ||||||||||||||||||  ||||||||| | |||||||| ||||||  ||  |||| ||||| ||||||||||    
T  6418723 gaaatagggatgtcaatgggtatccatgggtacagatagtatgatattcgtcaccgccccgttcgataaatatg 6418796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 208
Target Start/End: Complemental strand, 19061265 - 19061209
Alignment:
Q  151 gactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaatt 208  Q
    |||||||||||||||||| |||||| || |||||| ||||| |||| |||||||||||    
T  19061265 gactcaatatgactatga-tgcatggacatacaagcaaagattcaataatgcaaaatt 19061209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 488
Target Start/End: Complemental strand, 26898048 - 26897979
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatg 488  Q
    |||||| |||||||  ||||||||| | | |||||| ||||||||||  |||| ||||||||||||||||    
T  26898048 tagggaagtcaatgggtatccatggttacggatagtatgatatatgtccccgccccgttggataaatatg 26897979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 311
Target Start/End: Original strand, 27050520 - 27050565
Alignment:
Q  266 attgcatcatcaagcatttacatccatacaatcaacaagtcataat 311  Q
    ||||||| |||||| |||||| |||| |||||||||||||||||||    
T  27050520 attgcattatcaagtatttacgtccacacaatcaacaagtcataat 27050565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 1e-58; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 137 - 347
Target Start/End: Original strand, 15062592 - 15062802
Alignment:
Q  137 gttcttcaccaaaagactcaatatgactatgaatgcatgaacttacaagtaaagact-caacaatgcaaaattcacaacactatattatataatccagcc 235  Q
    ||||||||||||| ||||||| ||||||||||||||||| |||| ||| |||||||| | |||||||| || ||||||| |||||||||| |||  |  |    
T  15062592 gttcttcaccaaa-gactcaacatgactatgaatgcatggactttcaaataaagacttcgacaatgcacaaatcacaactctatattatacaatttacac 15062690  T
Q  236 catcatataatatcttcaccaaaactcaccattgcatcatcaagcatttacatccatacaatcaacaagtcataatcaacgaaagagtcatcaacataat 335  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||  |||||||||||||||||||||||| |||||||||||| ||||||    
T  15062691 catcatataatatcttcaccaaaactcatcattgcattatcaagcatttacatctgtacaatcaacaagtcataatcaacaaaagagtcatcatcataat 15062790  T
Q  336 catcataaacaa 347  Q
    |||||| |||||    
T  15062791 catcatcaacaa 15062802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 73 - 295
Target Start/End: Complemental strand, 15550445 - 15550223
Alignment:
Q  73 atccactaacgtaatccccttcgattacgttcttcatcaactaacataatcctcctccaattatgttcttcaccaaaagactcaatatgactatgaatgc 172  Q
    |||||||||| |||||| |  | ||||||||||||| |||||||| |||||| || ||||||| ||||||||||||||||||||| ||||||||||||||    
T  15550445 atccactaacataatcctcaccaattacgttcttcaccaactaacgtaatcc-ccaccaattacgttcttcaccaaaagactcaacatgactatgaatgc 15550347  T
Q  173 atgaacttacaagtaaagactcaacaatgcaaaattcacaacactatattatataatccagcccatcatataatatcttcaccaaaactcacca-ttgca 271  Q
    ||| |||| ||||||||||||| | |||||| |||||||||| |||| ||||| |||     ||||||||||||||||||||||||||  |||| |||||    
T  15550346 atggactttcaagtaaagactcgagaatgcataattcacaactctatgttatacaatttccaccatcatataatatcttcaccaaaacctaccatttgca 15550247  T
Q  272 tcatcaagcatttacatccataca 295  Q
    |||||||| |||||||||||||||    
T  15550246 tcatcaagtatttacatccataca 15550223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 424 - 511
Target Start/End: Complemental strand, 7987598 - 7987511
Alignment:
Q  424 atgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    |||| |||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  7987598 atgtaaatggatatccatggatgcagatattgtgatatctgtgtccgctccgttggataaatatgaaatccgtaccctatccatatcc 7987511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 419 - 509
Target Start/End: Original strand, 31005767 - 31005857
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatat 509  Q
    ||||||||| |||| ||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||| ||  |||||||||||    
T  31005767 tagggatgtaaatgtatatccatggatgcagatagtgtgatatccgtgtccgctccgttggacaaatatgaaatccgtgccctatccatat 31005857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 150 - 328
Target Start/End: Original strand, 16216541 - 16216719
Alignment:
Q  150 agactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaattcac-aacactatattatataatccagcccatcatataatat 248  Q
    ||||||||||| |||||||||||||| |||| ||||||||||||| |||||||| || |||| ||  || ||||||| |||     ||||||||||||||    
T  16216541 agactcaatat-actatgaatgcatggactttcaagtaaagactcgacaatgcacaaatcaccaattctctattatacaattttcaccatcatataatat 16216639  T
Q  249 cttcaccaaaactcaccattgcatcatcaagcatttacatccatacaa-tcaacaagtcataatcaacgaaagagtcatca 328  Q
    ||||||| ||| |||||||||||| || ||  |||||||||||||||| |  |||||||||||| ||| ||||||||||||    
T  16216640 cttcacc-aaattcaccattgcattataaacaatttacatccatacaattttacaagtcataattaacaaaagagtcatca 16216719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 440 - 511
Target Start/End: Complemental strand, 7968790 - 7968719
Alignment:
Q  440 atggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||| |||||||||||||    
T  7968790 atggatgcagatagtgtgatatccgtgtccgctccgttggataaatatgaaatccgtaccctatccatatcc 7968719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 419 - 512
Target Start/End: Complemental strand, 8227605 - 8227512
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcca 512  Q
    ||||||||| |||| |||||||||||||  |||||||||||||  |||||||||||||| ||||||||||||||| |||  |||||||||||||    
T  8227605 tagggatgtaaatggatatccatggatgtggatagtgtgatatccgtgtccgctccgttagataaatatgaaatccgtactctatccatatcca 8227512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 422 - 511
Target Start/End: Original strand, 11481187 - 11481276
Alignment:
Q  422 ggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    |||||| |||| |||||||| ||||| ||||||||||||| ||||||||||||  | ||||||||||||||  |||||||||||||||||    
T  11481187 ggatgtaaatggatatccatagatgcggatagtgtgatatttgtgtccgctccaatagataaatatgaaattcgtatcctatccatatcc 11481276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 235 - 403
Target Start/End: Original strand, 24270938 - 24271101
Alignment:
Q  235 ccatcatataatatcttcaccaaaactcaccattgcatcatcaagcatttacatccatacaatcaacaagtcataatcaacgaaagagtcatcaacataa 334  Q
    |||||||||||||||||||||||   |||| ||||||| |||||| |||||||||||||||   | ||||| ||||| ||  || |||||| ||| ||||    
T  24270938 ccatcatataatatcttcaccaat--tcacaattgcattatcaagtatttacatccataca---accaagtaataat-aaaaaacgagtcaacaatataa 24271031  T
Q  335 tcatcataaacaattatcacaactagaaaacaacatcgtttcacaaagcacaattgaca-aatagacgga 403  Q
    ||||||| |||| ||||||| |  || |||||||||| |||||||||| | |||| ||| ||||||||||    
T  24271032 tcatcatcaacagttatcactagaaggaaacaacatcttttcacaaagaaaaattcacataatagacgga 24271101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 419 - 511
Target Start/End: Complemental strand, 36583266 - 36583174
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    ||||||||| |||| ||||||||||||||  ||||| ||||||  ||||||| |||||| ||||||||||||||| ||| ||||| |||||||    
T  36583266 tagggatgtaaatggatatccatggatgcgtatagtatgatatccgtgtccgttccgttagataaatatgaaatccgtaccctattcatatcc 36583174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 129 - 258
Target Start/End: Original strand, 28932803 - 28932931
Alignment:
Q  129 ccaattatgttcttcaccaaaagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaattcacaacactatattatataa 228  Q
    |||||||  |||||||||||| |||  ||||||| |||||||||||| |||  ||||||||||||| |||||||| || |||  | ||||||||||||||    
T  28932803 ccaattacattcttcaccaaa-gaccgaatatgattatgaatgcatggactctcaagtaaagactcgacaatgcacaaatcatcaaactatattatataa 28932901  T
Q  229 tccagcccatcatataatatcttcaccaaa 258  Q
    |     |||||||||||||| |||||||||    
T  28932902 ttttcaccatcatataatattttcaccaaa 28932931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 15062436 - 15062536
Alignment:
Q  19 acttctacatacatgtggtatcaatttt-ggattcagatataatt-ttaccaagtaatccactaacgtaatccccttcgattacgttcttcatcaactaa 116  Q
    |||||||||| ||||||||| ||||||| |||||| || |||||| ||||| |||||||||||||||||||||||  | |||| |||||||| ||| |||    
T  15062436 acttctacatgcatgtggtaccaatttttggattcggagataattattaccgagtaatccactaacgtaatccccaccaattaagttcttcaccaagtaa 15062535  T
Q  117 c 117  Q
    |    
T  15062536 c 15062536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 452 - 511
Target Start/End: Complemental strand, 9765346 - 9765287
Alignment:
Q  452 agtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    ||||||||||||||||||||| |||| ||||||||| ||||| ||| |||||||||||||    
T  9765346 agtgtgatatatgtgtccgcttcgttagataaatattaaatccgtaccctatccatatcc 9765287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 57 - 162
Target Start/End: Original strand, 16724537 - 16724641
Alignment:
Q  57 ataattttaccaagtaatccactaacgtaatccccttcgattacgttcttcatcaactaacataatcctcctccaattatgttcttcaccaaaagactca 156  Q
    ||||| ||||| ||| ||||| |||||||| ||||  | |||| |||||||| |||||||||||||||  | || |||| ||||||||||||||||||||    
T  16724537 ataatcttaccgagtgatccattaacgtaacccccaccaattatgttcttcaccaactaacataatcc-gcaccgattacgttcttcaccaaaagactca 16724635  T
Q  157 atatga 162  Q
    | ||||    
T  16724636 acatga 16724641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 16216370 - 16216436
Alignment:
Q  22 tctacatacatgtggtatcaa-ttttggattcagatataattttaccaagtaatccactaacgtaat 87  Q
    ||||||| ||||||||| | | ||||||||||||| ||||||||||| |||||||||| ||||||||    
T  16216370 tctacatgcatgtggtaccgagttttggattcagacataattttaccgagtaatccacgaacgtaat 16216436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 45560727 - 45560670
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaat 207  Q
    |||||||||||||||||||| |||||| || |||||| |||||||| ||||||||||||    
T  45560727 aagactcaatatgactatga-tgcatggacatacaagcaaagactcgacaatgcaaaat 45560670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 21199682 - 21199628
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaa 204  Q
    ||||||||| |||||||||| |||||| || ||||||||| |||||||||||||||    
T  21199682 aagactcaacatgactatga-tgcatggacatacaagtaaggactcaacaatgcaa 21199628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 23148547 - 23148601
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaa 204  Q
    ||||||||| |||||||||| |||||| || ||||||||||||||| |||||||||    
T  23148547 aagactcaacatgactatga-tgcatggacatacaagtaaagactcgacaatgcaa 23148601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 25294620 - 25294674
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaa 204  Q
    ||||||||| |||||||||| |||||| || |||||| ||||||||||||||||||    
T  25294620 aagactcaacatgactatga-tgcatggacatacaagcaaagactcaacaatgcaa 25294674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 25756609 - 25756663
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaa 204  Q
    ||||||||| |||||||||| |||||| || |||||| ||||||||||||||||||    
T  25756609 aagactcaacatgactatga-tgcatggacatacaagcaaagactcaacaatgcaa 25756663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 31195793 - 31195739
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaa 204  Q
    ||||||||| |||||||||| |||||| || ||||||||| |||||||||||||||    
T  31195793 aagactcaacatgactatga-tgcatggacatacaagtaaggactcaacaatgcaa 31195739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 11543169 - 11543226
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaat 207  Q
    ||||||||| |||||||||| |||||| || |||||| |||||||| ||||||||||||    
T  11543169 aagactcaacatgactatga-tgcatggacatacaagcaaagactcgacaatgcaaaat 11543226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 15662414 - 15662365
Alignment:
Q  164 tatgaatgcatgaacttacaagtaaagactcaacaatgcaaaattcacaac 214  Q
    ||||||||||||||||| ||||||||||||| |||||||| || |||||||    
T  15662414 tatgaatgcatgaactt-caagtaaagactcgacaatgcataactcacaac 15662365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 492
Target Start/End: Complemental strand, 6870864 - 6870791
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaat 492  Q
    ||||||||| |||  |||||||||||||| |||| ||| ||||  ||||| |||  ||||||||||||||||||    
T  6870864 tagggatgtaaatatatatccatggatgcggataatgtaatatccgtgtctgctatgttggataaatatgaaat 6870791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 308
Target Start/End: Original strand, 15932127 - 15932168
Alignment:
Q  267 ttgcatcatcaagcatttacatccatacaatcaacaagtcat 308  Q
    |||||| |||||||||||||||||| |||||||||| |||||    
T  15932127 ttgcattatcaagcatttacatccacacaatcaacatgtcat 15932168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 266 - 314
Target Start/End: Original strand, 18179093 - 18179141
Alignment:
Q  266 attgcatcatcaagcatttacatccatacaatcaacaagtcataatcaa 314  Q
    ||||||| |||||  | |||||||||||||||||||||||||| |||||    
T  18179093 attgcattatcaaatacttacatccatacaatcaacaagtcatcatcaa 18179141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 19333136 - 19333081
Alignment:
Q  151 gactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaat 207  Q
    ||||||||||||||||| ||||||| || ||| || |||||||||| ||||||||||    
T  19333136 gactcaatatgactatg-atgcatggacatacgagcaaagactcaataatgcaaaat 19333081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 102; Significance: 2e-50; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 129 - 389
Target Start/End: Complemental strand, 17999256 - 17998996
Alignment:
Q  129 ccaattatgttcttcaccaaaagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaattcacaacactatattatataa 228  Q
    |||||||  ||||||||||||| ||||||| ||||||||||||||||||||| ||| ||| ||| | |||||||| || |||||| ||||||||||||||    
T  17999256 ccaattacattcttcaccaaaaaactcaatgtgactatgaatgcatgaactttcaattaaggacccgacaatgcacaaatcacaaaactatattatataa 17999157  T
Q  229 tccagcccatcatataatatcttcaccaaaactcacca-ttgcatcatcaagcatttacatccatacaatcaacaagtcataatcaacgaaagagtcatc 327  Q
    |  |  ||||||||||||||||||||||||   ||||| |||||| || ||| |||||||| ||||||| |||||||||||||| ||| |||||||||||    
T  17999156 tttacaccatcatataatatcttcaccaaacaccaccatttgcattattaagtatttacattcatacaaacaacaagtcataattaacaaaagagtcatc 17999057  T
Q  328 aacataatcatcataaacaattatcacaactagaaaacaacatcgtttcacaaagcacaatt 389  Q
    | |||| | ||||| |||||||||||| || ||  | |||||||||||| |||| |||||||    
T  17999056 atcatatttatcatcaacaattatcaccacaag-gagcaacatcgtttctcaaaacacaatt 17998996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 137 - 381
Target Start/End: Complemental strand, 17492783 - 17492539
Alignment:
Q  137 gttcttcaccaaaagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaattcac-aacactatattatataatccagcc 235  Q
    ||||||||||||  ||||| | ||||||||||||||||| |||||||||||||||||| ||| |||| || |||| ||  |||||||||| ||| ||  |    
T  17492783 gttcttcaccaag-gactcgacatgactatgaatgcatggacttacaagtaaagactcgaca-tgcacaaatcactaattctatattatacaattcacac 17492686  T
Q  236 catcatataatatcttcaccaaaactcaccattgcatcatcaagcatttacatccatacaa-tcaacaagtcataatcaacgaaagagtcatcaacataa 334  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| | || |||||||||||||  |||||||||||||||||     
T  17492685 catcatataatatcttcatcaaaattcaccattgcatcatcaagcatttacatccatacaatttaaaaagtcataatcaa-taaagagtcatcaacatat 17492587  T
Q  335 tcatcataaacaattatcacaactagaaaacaac-atcgtttcacaaa 381  Q
    ||| ||| | ||| |||||| || || ||||||| |||||||||||||    
T  17492586 tcaccatcatcaactatcaccacaaggaaacaacaatcgtttcacaaa 17492539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 137 - 381
Target Start/End: Original strand, 17560431 - 17560675
Alignment:
Q  137 gttcttcaccaaaagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaattcac-aacactatattatataatccagcc 235  Q
    ||||||||||||  ||||| | ||||||||||||||||| |||||||||||||||||| ||| |||| || |||| ||  |||||||||| ||| ||  |    
T  17560431 gttcttcaccaag-gactcgacatgactatgaatgcatggacttacaagtaaagactcgaca-tgcacaaatcactaattctatattatacaattcacac 17560528  T
Q  236 catcatataatatcttcaccaaaactcaccattgcatcatcaagcatttacatccatacaa-tcaacaagtcataatcaacgaaagagtcatcaacataa 334  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| | || |||||||||||||  |||||||||||||||||     
T  17560529 catcatataatatcttcatcaaaattcaccattgcatcatcaagcatttacatccatacaatttaaaaagtcataatcaa-taaagagtcatcaacatat 17560627  T
Q  335 tcatcataaacaattatcacaactagaaaacaac-atcgtttcacaaa 381  Q
    ||| ||| | ||| |||||| || || ||||||| |||||||||||||    
T  17560628 tcaccatcatcaactatcaccacaaggaaacaacaatcgtttcacaaa 17560675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 129 - 341
Target Start/End: Complemental strand, 33291478 - 33291268
Alignment:
Q  129 ccaattatgttcttcaccaaaagactcaat-atgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaattcacaacactatattatata 227  Q
    ||||||| ||||||||||||| |||||||| ||||||||||||||||  |||  || |||||||||| |||||||| |||| | ||| |||| |||||||    
T  33291478 ccaattacgttcttcaccaaa-gactcaatgatgactatgaatgcatcgactatcacgtaaagactcgacaatgcataatttataactctatgttatata 33291380  T
Q  228 atccagcccatcatataatatcttcaccaaaactcacca-ttgcatcatcaagcatttacatccatacaatcaacaagtcataatcaacgaaagagtcat 326  Q
    || |   |||||||||||||| ||||||||||| || || ||||||||||||| |||||||| ||||| ||||||||||||| |||| |  || | ||||    
T  33291379 attcccaccatcatataatatattcaccaaaacccatcatttgcatcatcaagtatttacattcatac-atcaacaagtcatcatcacc--aaaaatcat 33291283  T
Q  327 caacataatcatcat 341  Q
    || ||||||||||||    
T  33291282 catcataatcatcat 33291268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 110 - 248
Target Start/End: Complemental strand, 11622132 - 11621995
Alignment:
Q  110 caactaacataatcctcctccaattatgttcttcaccaaaagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaattc 209  Q
    |||||||| |||||| || ||||||| ||| || ||||||||||| || ||||||||||||||||||| || ||||||||||||| |||||||| |||||    
T  11622132 caactaacgtaatcc-ccaccaattacgttatttaccaaaagactaaacatgactatgaatgcatgaattttcaagtaaagactcgacaatgcataattc 11622034  T
Q  210 acaacactatattatataatccagcccatcatataatat 248  Q
    || || | |||||||||||| |   ||||||||||||||    
T  11622033 accactcaatattatataattcccaccatcatataatat 11621995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 112 - 313
Target Start/End: Complemental strand, 6010759 - 6010558
Alignment:
Q  112 actaacataatcctcctccaattatgttcttcaccaaaagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaattcac 211  Q
    |||||| |||||| || ||||||| |||||||| |||||||||||| |||    |||||  ||| |||| ||||||||||||| ||||||||   |||||    
T  6010759 actaacgtaatcc-ccaccaattacgttcttcatcaaaagactcaacatggacgtgaatt-atggactttcaagtaaagactcgacaatgcatggttcac 6010662  T
Q  212 aaca--ctatattatataatccagcccatcatataatatcttcaccaaaactcacca-ttgcatcatcaagcatttacatccatacaatcaacaagtcat 308  Q
    |||   |||||||||||||| |   | ||||||||||||||||||||| || ||||| ||||||||||||| ||||| |||||||| |||||||||||||    
T  6010661 aactttctatattatataattcccactatcatataatatcttcaccaagacccaccatttgcatcatcaagtatttatatccatac-atcaacaagtcat 6010563  T
Q  309 aatca 313  Q
    |||||    
T  6010562 aatca 6010558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 416 - 505
Target Start/End: Complemental strand, 38440821 - 38440732
Alignment:
Q  416 aaatagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatcc 505  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||  ||||||||| |||||||||||||||||||  ||||| |||||    
T  38440821 aaatagggatgtaaatgaatatccatggatgcggatagtgtgatattcgtgtccgcttcgttggataaatatgaaattcgtatcatatcc 38440732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 422 - 511
Target Start/End: Original strand, 7766814 - 7766903
Alignment:
Q  422 ggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    |||||| |||| |||| ||||||||| |||||||||||||   |||||||||||||||||||||||||||| |||||| |||||||||||    
T  7766814 ggatgtaaatggatatacatggatgcggatagtgtgatattcatgtccgctccgttggataaatatgaaatatgtatcttatccatatcc 7766903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 419 - 509
Target Start/End: Original strand, 5972731 - 5972821
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatat 509  Q
    ||||||||| |||| ||||||||| |||| |||||||||||||  ||||| |||||||| ||||||||||||||| ||| |||||||||||    
T  5972731 tagggatgtaaatggatatccatgaatgcggatagtgtgatatccgtgtctgctccgttagataaatatgaaatccgtaccctatccatat 5972821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 150 - 228
Target Start/End: Complemental strand, 14974062 - 14973984
Alignment:
Q  150 agactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaattcacaacactatattatataa 228  Q
    |||||| | ||||||||||||||||| ||  ||| |||||||||||||||||| |||||||||||||||||||||||||    
T  14974062 agactcgacatgactatgaatgcatggacagacacgtaaagactcaacaatgctaaattcacaacactatattatataa 14973984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 150 - 228
Target Start/End: Complemental strand, 15403538 - 15403460
Alignment:
Q  150 agactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaattcacaacactatattatataa 228  Q
    |||||| | ||||||||||||||||| ||  ||| |||||||||||||||||| |||||||||||||||||||||||||    
T  15403538 agactcgacatgactatgaatgcatggacagacacgtaaagactcaacaatgctaaattcacaacactatattatataa 15403460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 422 - 511
Target Start/End: Complemental strand, 23810052 - 23809963
Alignment:
Q  422 ggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    |||||| |||| |||||||||||||| ||||||| |||||  |||||| ||||||| ||||||||||||||| ||| |||||||||||||    
T  23810052 ggatgtaaatggatatccatggatgcggatagtgcgatatccgtgtccactccgttagataaatatgaaatccgtaccctatccatatcc 23809963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 419 - 511
Target Start/End: Complemental strand, 11039564 - 11039472
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    ||||||||| |||  ||||||||||||||||||| | ||||||  |||||| |||||||||||||||||||||| |||| | |||||||||||    
T  11039564 tagggatgtaaatagatatccatggatgcagataatatgatatccgtgtccactccgttggataaatatgaaatttgtaccatatccatatcc 11039472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 148 - 289
Target Start/End: Complemental strand, 14279950 - 14279808
Alignment:
Q  148 aaagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaattca-caacactatattatataatccagcccatcatataat 246  Q
    |||||||||| ||||||||||||||||| ||||  | ||||||||||||||||||  || ||| |||  | |||||||| |||  |  ||||||||||||    
T  14279950 aaagactcaacatgactatgaatgcatgtactttaacgtaaagactcaacaatgctcaaatcaccaattccatattatacaatttacaccatcatataat 14279851  T
Q  247 atcttcaccaaaactcacc-attgcatcatcaagcatttacatc 289  Q
    ||||||||| ||| ||||| |||||||||||||| |||||||||    
T  14279850 atcttcacc-aaattcaccaattgcatcatcaagtatttacatc 14279808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 419 - 512
Target Start/End: Original strand, 27336693 - 27336786
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcca 512  Q
    ||||||||| |||| || |||||||||||||||||||||||||  |||||| || |||| |||||||||||||||   | ||||||||||||||    
T  27336693 tagggatgtaaatggatgtccatggatgcagatagtgtgatatccgtgtccacttcgttagataaatatgaaatccagaccctatccatatcca 27336786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 419 - 511
Target Start/End: Original strand, 33189144 - 33189236
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    ||||||||| |||| ||||| ||||||||||||||| ||||||  |||||| ||||||| |||||||||||||| |||  |||||| ||||||    
T  33189144 tagggatgtaaatggatatctatggatgcagatagtttgatatccgtgtccactccgtttgataaatatgaaatatgtgccctatcaatatcc 33189236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 416 - 511
Target Start/End: Complemental strand, 22519571 - 22519476
Alignment:
Q  416 aaatagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    |||||||||||| |||| |||||||||||| | |||||||| |||| | |||| |||| ||||||||| ||||||||| ||| ||||||| |||||    
T  22519571 aaatagggatgtaaatggatatccatggatacggatagtgtaatatttttgtctgctcggttggataattatgaaatccgtaccctatccgtatcc 22519476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 17150943 - 17150889
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgca 203  Q
    ||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||    
T  17150943 aagactcaacatgactaagaatgcatgaactttcaagtaaagactcaacaatgca 17150889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 436 - 513
Target Start/End: Complemental strand, 1053440 - 1053363
Alignment:
Q  436 atccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatccac 513  Q
    ||||||||||||||||||||||||||  ||||||||||| || || |||||||||||||||  | ||| |||||||||    
T  1053440 atccatggatgcagatagtgtgatatccgtgtccgctccattagacaaatatgaaatctgtgccttattcatatccac 1053363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 153 - 257
Target Start/End: Original strand, 13487956 - 13488058
Alignment:
Q  153 ctcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaattcacaacactatattatataa--tccagcccatcatataatatct 250  Q
    ||||| |||||||||| ||||||||||| ||||||||||||| |||||||| || |||| | ||||||||||| ||  ||||   |||||||||||||||    
T  13487956 ctcaacatgactatgattgcatgaactt-caagtaaagactcgacaatgcacaactcaccaaactatattatacaatttcca---catcatataatatct 13488051  T
Q  251 tcaccaa 257  Q
    |||||||    
T  13488052 tcaccaa 13488058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 438 - 511
Target Start/End: Complemental strand, 30541839 - 30541766
Alignment:
Q  438 ccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    |||||||||| |||||| ||||||  || ||||||||||||||| ||||||||||| ||| |||||||||||||    
T  30541839 ccatggatgcggatagtatgatattcgtatccgctccgttggattaatatgaaatccgtaccctatccatatcc 30541766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 73 - 307
Target Start/End: Original strand, 19312741 - 19312961
Alignment:
Q  73 atccactaacgtaatccccttcgattacgttcttcatcaactaacataatcctcctccaattatgttcttcaccaaaagactcaatatgactatgaatgc 172  Q
    ||||| |||| ||||||||  | ||||| ||||||| |||||||  |||||| |  ||||||| ||||||||||||||||||||| ||||||||          
T  19312741 atccaataacataatccccaccaattacattcttcaccaactaatgtaatcc-cgaccaattacgttcttcaccaaaagactcaacatgactat------ 19312833  T
Q  173 atgaacttacaagtaaagactcaacaatgcaaaattcacaacactatattatataatccagcccatcatataatatcttcaccaaaactcacca-ttgca 271  Q
           | |||| ||||| ||||||||||| |||| ||||| || ||||||| ||| |   ||||||| ||||||||||| || ||| ||||| ||| |    
T  19312834 -------ttcaagcaaagattcaacaatgcataattgacaactctgtattatacaattcccaccatcatttaatatcttcaacacaacccaccatttgta 19312926  T
Q  272 tcatcaagcatttacatccatacaatcaacaagtca 307  Q
    |||||||  |||||||||||||| ||||||||||||    
T  19312927 tcatcaaatatttacatccatac-atcaacaagtca 19312961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 16175288 - 16175342
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgca 203  Q
    ||||||||  |||||||||||||||||||||| ||||||||||||| ||||||||    
T  16175288 aagactcagcatgactatgaatgcatgaacttccaagtaaagactcgacaatgca 16175342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 149 - 310
Target Start/End: Original strand, 17910631 - 17910792
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaattcacaacactatattatataatccagcccatcatataatat 248  Q
    ||||||| | ||||| ||||||||||| |||| |||| ||||| || |||||||| |  |||| | ||||||||||| |||     ||||||||||| ||    
T  17910631 aagactcgacatgaccatgaatgcatggactt-caagcaaagattccacaatgcacatatcaccaaactatattatacaattttcaccatcatataacat 17910729  T
Q  249 cttcaccaaaactc-accattgcatcatcaagcatttacatccatacaatcaacaagtcataa 310  Q
     ||||||||  | | |||||||||| |||||| ||||||||||| ||||||||||||| ||||    
T  17910730 attcaccaattcaccaccattgcattatcaagtatttacatccacacaatcaacaagttataa 17910792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 550 - 591
Target Start/End: Original strand, 8807490 - 8807531
Alignment:
Q  550 tcctttgctaaaataagaatgatgtgtttctctctttgttct 591  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  8807490 tcctttgctaaaataagaatgatgtgtctctctctttgttct 8807531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 418 - 505
Target Start/End: Original strand, 47924739 - 47924826
Alignment:
Q  418 atagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatcc 505  Q
    |||||||| | |||| |||| |||||||| ||||||| | ||||| ||||||| | | |||||||||||||||||| ||| |||||||    
T  47924739 atagggatataaatggatattcatggatgtagatagtctaatatacgtgtccgtttcattggataaatatgaaatccgtaccctatcc 47924826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 9322574 - 9322517
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaat 207  Q
    ||||||||| |||||||||| |||||| || ||||||||||||||| ||||||||||||    
T  9322574 aagactcaacatgactatga-tgcatggacatacaagtaaagactcgacaatgcaaaat 9322517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 151 - 208
Target Start/End: Original strand, 16382214 - 16382270
Alignment:
Q  151 gactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaatt 208  Q
    |||||||||||||||||| |||||| || |||||| |||||||||| |||||||||||    
T  16382214 gactcaatatgactatga-tgcatggacatacaagcaaagactcaataatgcaaaatt 16382270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 13388622 - 13388677
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaa 205  Q
    ||||||||| |||||||||| |||||| || ||||||||| ||||||||||||||||    
T  13388622 aagactcaacatgactatga-tgcatggacatacaagtaaggactcaacaatgcaaa 13388677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 510
Target Start/End: Complemental strand, 2944442 - 2944355
Alignment:
Q  423 gatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatc 510  Q
    ||||| |||| | |||||||||||  ||| |||||||||  |||||||||| |||| |||| ||||||| ||||| ||||| ||||||    
T  2944442 gatgtaaatggacatccatggatgtggatggtgtgatatccgtgtccgctctgttgtataagtatgaaaactgtaccctattcatatc 2944355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 6210488 - 6210422
Alignment:
Q  136 tgttcttcaccaaaagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgca 203  Q
    |||||||||||| | ||||| ||||||||||||||||||||||   ||||||||||||  ||||||||    
T  6210488 tgttcttcaccata-gactcgatatgactatgaatgcatgaaccctcaagtaaagacttgacaatgca 6210422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 309
Target Start/End: Complemental strand, 17150813 - 17150770
Alignment:
Q  266 attgcatcatcaagcatttacatccatacaatcaacaagtcata 309  Q
    ||||||| |||||  |||||||||||||||||||||||||||||    
T  17150813 attgcattatcaactatttacatccatacaatcaacaagtcata 17150770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 8807427 - 8807465
Alignment:
Q  19 acttctacatacatgtggtatcaattttggattcagata 57  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  8807427 acttctacatacatgtggtaccaattttggattcggata 8807465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 453 - 499
Target Start/End: Complemental strand, 15954974 - 15954928
Alignment:
Q  453 gtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatc 499  Q
    ||||||||| |||||||| |||||||||||||||| |||| ||||||    
T  15954974 gtgtgatatctgtgtccgttccgttggataaatataaaatttgtatc 15954928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 308
Target Start/End: Complemental strand, 17225306 - 17225264
Alignment:
Q  266 attgcatcatcaagcatttacatccatacaatcaacaagtcat 308  Q
    ||||||| |||||||||||||||||| |||||||||| |||||    
T  17225306 attgcattatcaagcatttacatccacacaatcaacatgtcat 17225264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 419 - 509
Target Start/End: Original strand, 25501894 - 25501984
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatat 509  Q
    ||||||||| |||| ||||||||| |||  || ||||||||||   ||| ||||||||| |||||||||||||| | || ||||| |||||    
T  25501894 tagggatgtaaatggatatccatgaatgttgaaagtgtgatatccatgttcgctccgttagataaatatgaaatttataccctattcatat 25501984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 26427278 - 26427331
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgca 203  Q
    ||||||||||||||||||||||||||  ||||  |||||||||||| ||||||||    
T  26427278 aagactcaatatgactatgaatgcatagactt-taagtaaagactcgacaatgca 26427331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 28719111 - 28719168
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaat 207  Q
    ||||||||| |||||||||| |||||| || |||||| |||||||| ||||||||||||    
T  28719111 aagactcaacatgactatga-tgcatggacatacaagcaaagactcgacaatgcaaaat 28719168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 13376323 - 13376382
Alignment:
Q  144 accaaaagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaa 204  Q
    |||| |||||| ||||||||||||| |||||| || | ||||||| |||||||||||||||    
T  13376323 accataagactaaatatgactatga-tgcatggacatgcaagtaaggactcaacaatgcaa 13376382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 449 - 497
Target Start/End: Original strand, 31457128 - 31457176
Alignment:
Q  449 gatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgta 497  Q
    ||||||||||||| |||||||| |  |||||||||||||||||| ||||    
T  31457128 gatagtgtgatatttgtgtccgttttgttggataaatatgaaatatgta 31457176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 48354144 - 48354184
Alignment:
Q  268 tgcatcatcaagcatttacatccatacaatcaacaagtcat 308  Q
    ||||| |||||||||||||||||| |||||||||| |||||    
T  48354144 tgcattatcaagcatttacatccacacaatcaacatgtcat 48354184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 9e-50; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 129 - 403
Target Start/End: Complemental strand, 13122336 - 13122062
Alignment:
Q  129 ccaattatgttcttcaccaaaagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaattcacaacactatattatataa 228  Q
    ||||||| ||||||||||||| ||||||| ||||||| ||||||||| |||| ||  ||| ||||| |||||||| |||||||||| |||||||||||||    
T  13122336 ccaattacgttcttcaccaaa-gactcaacatgactacgaatgcatggactttcacataacgactcgacaatgcataattcacaactctatattatataa 13122238  T
Q  229 tccagcccatcatataatatcttcaccaaaactcaccattgcatcatcaagcatttacatccatacaa-tcaacaagtcataatcaacgaaagagtcatc 327  Q
    |     ||||||| ||||| |||||||| ||| ||||||||||| |||||||||||||||||||| || |||||||||| |||||||| |||||  ||||    
T  13122237 ttttcaccatcatgtaataccttcaccataacacaccattgcattatcaagcatttacatccatataattcaacaagtcgtaatcaac-aaagaaccatc 13122139  T
Q  328 aacataatcatcataaacaattatcacaactagaaaacaacatcgtttcacaaagcacaattgaca-aatagacgga 403  Q
    | |||||||||||  |||||||| |||  | || ||||||||||||| |||||||||||| | ||| ||||||||||    
T  13122138 atcataatcatcaccaacaattagcacctcaaggaaacaacatcgttccacaaagcacaagtcacataatagacgga 13122062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 57 - 313
Target Start/End: Original strand, 22541953 - 22542207
Alignment:
Q  57 ataattttaccaagtaatccactaacgtaatccccttcgattacgttcttcatcaactaacataatcctcctccaattatgttcttcaccaaaagactca 156  Q
    ||||| ||| ||||| |||||||||  ||||| ||  | |||||||||||||  ||||||| ||||||  | ||||||| |||||||||||||| ||| |    
T  22541953 ataatattaacaagtgatccactaatataatctccaccaattacgttcttcactaactaacgtaatcc--caccaattacgttcttcaccaaaaaactaa 22542050  T
Q  157 atatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaattcacaacactatattatataatccagcccatcatataatatcttcacca 256  Q
    | ||||||||| ||||||| ||| |||||||||||||| |||||||| |||||||||| |||||| ||||||| |    ||||||||||||||||||| |    
T  22542051 acatgactatgcatgcatggactaacaagtaaagactcgacaatgcataattcacaactctatataatataattctcatcatcatataatatcttcacta 22542150  T
Q  257 aaactcacca-ttgcatcatcaagcatttacatccatacaatcaacaagtcataatca 313  Q
    ||||  |||| ||||||||||||| |||||||||||||| ||||||||||||| ||||    
T  22542151 aaacctaccatttgcatcatcaagtatttacatccatac-atcaacaagtcatcatca 22542207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 152 - 387
Target Start/End: Complemental strand, 15482385 - 15482146
Alignment:
Q  152 actcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaattcacaacactatattatataatccagcccatcatataatatctt 251  Q
    |||||||||||||||||||||||| |||| ||||||||||||| |||||||| |  |||| | |||||||||||||||  |  |||||||||||||||||    
T  15482385 actcaatatgactatgaatgcatggactttcaagtaaagactcgacaatgcacatatcacca-actatattatataatttacaccatcatataatatctt 15482287  T
Q  252 caccaaaactcaccattgcatc-----atcaagcatttacatccatacaatcaacaagtcataatcaacgaaagagtcatcaacataatcatcataaaca 346  Q
     ||| ||| ||||||||||||      || ||||||||||||||| | ||||||||||||||||||||| ||||||||| ||  ||||||||||  ||||    
T  15482286 aaccgaaattcaccattgcattgcattataaagcatttacatccacataatcaacaagtcataatcaacaaaagagtcaacactataatcatcaccaaca 15482187  T
Q  347 attatcacaactagaaaacaacatcgtttcacaaagcacaa 387  Q
     ||||||| || || ||||||||  |||||| ||| |||||    
T  15482186 tttatcaccacaaggaaacaacaatgtttcagaaaacacaa 15482146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 96 - 311
Target Start/End: Complemental strand, 23090293 - 23090075
Alignment:
Q  96 attacgttcttcatcaactaacataatc--ctcctccaattatgttcttcaccaaaagactcaatatgactatgaatgcatgaacttacaagtaaagact 193  Q
    |||||||||||||||||||||  ||||   | || |||||||  |||||||||||||||||| | |||||||||||||||| || ||||||| ||| |||    
T  23090293 attacgttcttcatcaactaatgtaataaacaccaccaattaaattcttcaccaaaagactcgacatgactatgaatgcattaatttacaagcaaacact 23090194  T
Q  194 caacaatgcaaaattcacaacactatattatataatccagcccatcatataatatcttcaccaaaactcacca-ttgcatcatcaagcatttacatccat 292  Q
    | |||||||| |||| || | |||| ||||||||||| |  ||||||||||||||||||||||||   ||| | ||| || ||||||||||||||||||     
T  23090193 cgacaatgcacaatttaccaaactagattatataatctacaccatcatataatatcttcaccaaacaccacaatttgaattatcaagcatttacatccac 23090094  T
Q  293 acaatcaacaagtcataat 311  Q
    |||||||||||||||||||    
T  23090093 acaatcaacaagtcataat 23090075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 418 - 513
Target Start/End: Complemental strand, 10409312 - 10409217
Alignment:
Q  418 atagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatccac 513  Q
    |||||||| |||||| |||| ||||||||  ||||||||||||||||||| ||||||||||||||||||| ||||| ||| |||||||||||||||    
T  10409312 atagggatatcaatggatattcatggatgatgatagtgtgatatatgtgttcgctccgttggataaatataaaatccgtaccctatccatatccac 10409217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 419 - 511
Target Start/End: Original strand, 7622115 - 7622207
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    ||||||||| |||| |||||||  ||||||||||||||||||| |||||||| ||||||| |||||||||||||||||| | |||||||||||    
T  7622115 tagggatgtaaatggatatccacagatgcagatagtgtgatatctgtgtccgttccgttgaataaatatgaaatctgtaccttatccatatcc 7622207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 432 - 511
Target Start/End: Original strand, 5999306 - 5999385
Alignment:
Q  432 gaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    |||||||||||||||| |||||||||||||  |||||||||||||| ||||||||||||||| ||| |||||||||||||    
T  5999306 gaatatccatggatgcggatagtgtgatatccgtgtccgctccgttagataaatatgaaatccgtaccctatccatatcc 5999385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 235 - 326
Target Start/End: Complemental strand, 14487073 - 14486981
Alignment:
Q  235 ccatcatataatatcttcaccaaaactcaccattgcatcatcaagcatttacatccata-caatcaacaagtcataatcaacgaaagagtcat 326  Q
    ||||||||||||||||||||||||| ||| |||||||| ||||| |||||||||||||| || | |||||||| |||||||| ||||||||||    
T  14487073 ccatcatataatatcttcaccaaaattcatcattgcattatcaaacatttacatccataccatttaacaagtcgtaatcaacaaaagagtcat 14486981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 419 - 511
Target Start/End: Complemental strand, 32292758 - 32292666
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    ||||||||| |||| ||||| |||||||| |||||| ||||||  ||||||||||||||||||||||||||||||  || |||||||||||||    
T  32292758 tagggatgtaaatggatatcgatggatgcggatagtatgatatccgtgtccgctccgttggataaatatgaaatccataccctatccatatcc 32292666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 418 - 511
Target Start/End: Original strand, 8576500 - 8576593
Alignment:
Q  418 atagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    |||||||||| |||| |||||||||||||| |||||||||||||  ||||||| ||||||  |||||||||||||| |||  ||||||||||||    
T  8576500 atagggatgtaaatggatatccatggatgcggatagtgtgatatccgtgtccgttccgttaaataaatatgaaatccgtactctatccatatcc 8576593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 22442588 - 22442691
Alignment:
Q  22 tctacatacatgtggtatcaattttggatt-cagatataattttaccaagtaatccactaacgtaatccccttcgattacgttcttcatcaactaacata 120  Q
    ||||||| ||||||||| ||| |||||||| | ||  |||| ||||||||| ||||||||||||||| |||| | ||||||||||||| |||||||||||    
T  22442588 tctacatgcatgtggtaccaagtttggatttcggaggtaatcttaccaagttatccactaacgtaataccctccaattacgttcttcaccaactaacata 22442687  T
Q  121 atcc 124  Q
    ||||    
T  22442688 atcc 22442691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 137 - 295
Target Start/End: Complemental strand, 23845727 - 23845569
Alignment:
Q  137 gttcttcaccaaaagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaattcacaacactatattatataatccagccc 236  Q
    ||||||||||||| ||||||| |||||  |||||||||| |||| ||| ||||||||| ||||| || || ||||||| ||||||||||||||  |   |    
T  23845727 gttcttcaccaaa-gactcaacatgacattgaatgcatggactttcaattaaagactcgacaatacacaaatcacaactctatattatataatttacatc 23845629  T
Q  237 atcatataatatcttcaccaaaactcacc-attgcatcatcaagcatttacatccataca 295  Q
    ||||||||||||||||| |||||  ||||  |||||| |||||| ||||| || ||||||    
T  23845628 atcatataatatcttcatcaaaatccaccgtttgcattatcaagtatttatattcataca 23845569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 419 - 511
Target Start/End: Complemental strand, 34435176 - 34435084
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    ||||||||| |||| |||| ||||||||| |||||||||||||  || |||||||| || |||||||||||||||| || |||||| ||||||    
T  34435176 tagggatgtaaatggatattcatggatgcggatagtgtgatatccgtatccgctccattagataaatatgaaatctctaccctatctatatcc 34435084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 303
Target Start/End: Complemental strand, 22786283 - 22786217
Alignment:
Q  235 ccatcatataatatcttcaccaaaactcaccattgcatcatcaagcatttacatccatacaatcaacaa 303  Q
    |||||||||||||||||||||||   |||||||||||| |||||  |||||||||||||||||||||||    
T  22786283 ccatcatataatatcttcaccaat--tcaccattgcattatcaataatttacatccatacaatcaacaa 22786217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 339
Target Start/End: Complemental strand, 14874873 - 14874801
Alignment:
Q  267 ttgcatcatcaagcatttacatccatacaatcaacaagtcataatcaacgaaagagtcatcaacataatcatc 339  Q
    |||||| |||||| ||||||||||| ||||||| ||| |||| |||||| ||||||||||||  |||||||||    
T  14874873 ttgcattatcaagtatttacatccacacaatcatcaaatcatgatcaacaaaagagtcatcattataatcatc 14874801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 511
Target Start/End: Original strand, 28581903 - 28581991
Alignment:
Q  423 gatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    ||||| |||| |||||||||||||  |||||||||||||   |||| |||||||| |||||||||||||||  || ||||| |||||||    
T  28581903 gatgtaaatggatatccatggatgtggatagtgtgatatccatgtctgctccgttagataaatatgaaatccataccctattcatatcc 28581991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 511
Target Start/End: Original strand, 10788326 - 10788415
Alignment:
Q  424 atgtcaatgaatatccatggatgcagatagtgtgatata--tgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    |||| |||| |||| |||| |||| |||||||||||||   ||||||||||||||| |||||| ||||||||  || |||||||||||||    
T  10788326 atgtaaatggatattcatgtatgcggatagtgtgatatccgtgtgtccgctccgttagataaacatgaaatccataccctatccatatcc 10788415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 207
Target Start/End: Original strand, 16375041 - 16375096
Alignment:
Q  151 gactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaat 207  Q
    |||||||||||||||||| ||||||||| || ||| |||||||| ||||||||||||    
T  16375041 gactcaatatgactatga-tgcatgaacatataagcaaagactcgacaatgcaaaat 16375096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 259 - 389
Target Start/End: Original strand, 22457203 - 22457328
Alignment:
Q  259 actcaccattgcatcatcaagcatttacatccatacaatcaacaagtcataatcaa-cgaaagagtcatcaacataatcatcataaacaattatcacaac 357  Q
    ||||| |||||||| |||||  |||||||| || |||||||||||||| |||||||   ||| ||||| ||||||||||||      ||| || ||| ||    
T  22457203 actcaacattgcattatcaaatatttacatgcacacaatcaacaagtcttaatcaataaaaacagtcaacaacataatcat------caagtaccaccac 22457296  T
Q  358 tagaaaacaacatcgtttcacaaagcacaatt 389  Q
     || |||||| |||||||||||||||||||||    
T  22457297 aaggaaacaatatcgtttcacaaagcacaatt 22457328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 419 - 511
Target Start/End: Complemental strand, 35168089 - 35167997
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    ||||||||| |||| ||||||||||||||  ||||| ||||||  || ||| |||| || ||||||||| ||||| ||| ||||| |||||||    
T  35168089 tagggatgtaaatggatatccatggatgcgaatagtatgatatccgtatccactccattagataaatataaaatccgtaccctattcatatcc 35167997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 25649952 - 25649994
Alignment:
Q  266 attgcatcatcaagcatttacatccatacaatcaacaagtcat 308  Q
    ||||||| |||||||||||||||||| |||||||||| |||||    
T  25649952 attgcattatcaagcatttacatccacacaatcaacatgtcat 25649994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 311
Target Start/End: Complemental strand, 5485722 - 5485677
Alignment:
Q  266 attgcatcatcaagcatttacatccatacaatcaacaagtcataat 311  Q
    ||||||| |||||| |||||| |||| |||||||||||||||||||    
T  5485722 attgcattatcaagtatttacgtccacacaatcaacaagtcataat 5485677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 18383194 - 18383139
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaa 205  Q
    ||||||||| |||||||||| ||| || || ||||||||| ||||||||||||||||    
T  18383194 aagactcaacatgactatga-tgcttggacatacaagtaaggactcaacaatgcaaa 18383139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 158 - 202
Target Start/End: Complemental strand, 19728862 - 19728819
Alignment:
Q  158 tatgactatgaatgcatgaacttacaagtaaagactcaacaatgc 202  Q
    ||||||||||||||||||||||| ||||||| ||||| |||||||    
T  19728862 tatgactatgaatgcatgaactt-caagtaaggactccacaatgc 19728819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 29162021 - 29161966
Alignment:
Q  151 gactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaat 207  Q
    ||||||||||||||||| ||||||| || |||||| ||||||| || ||||||||||    
T  29162021 gactcaatatgactatg-atgcatggacatacaagcaaagacttaataatgcaaaat 29161966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 31162399 - 31162344
Alignment:
Q  151 gactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaat 207  Q
    ||||||||||||||||| ||||||| || |||||| |||||||| |||| |||||||    
T  31162399 gactcaatatgactatg-atgcatggacatacaagcaaagactcgacaaagcaaaat 31162344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 4e-49; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 57 - 295
Target Start/End: Complemental strand, 28579497 - 28579259
Alignment:
Q  57 ataattttaccaagtaatccactaacgtaatccccttcgattacgttcttcatcaactaacataatcctcctccaattatgttcttcaccaaaagactca 156  Q
    ||||| ||||| ||| |||||||||| |||||| |  | ||||||||||||| |||||||| |||||| |  ||||||| ||||||||||||||| || |    
T  28579497 ataatattaccgagtgatccactaacataatcctcaccaattacgttcttcaccaactaacgtaatcc-ctaccaattacgttcttcaccaaaaggctaa 28579399  T
Q  157 atatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaattcacaacactatattatataatccagcccatcatataatatcttcacca 256  Q
    | ||||||||||||||||| |||| ||||||||||||| |||||| | |||||||||| ||||||||||||||     ||||||||||||||||||||||    
T  28579398 acatgactatgaatgcatggacttccaagtaaagactcgacaatgaataattcacaactctatattatataattaccaccatcatataatatcttcacca 28579299  T
Q  257 aaactcacca-ttgcatcatcaagcatttacatccataca 295  Q
    ||||  |||| ||||||||||||| |||||||| ||||||    
T  28579298 aaaccaaccatttgcatcatcaagtatttacattcataca 28579259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 129 - 311
Target Start/End: Complemental strand, 23154362 - 23154178
Alignment:
Q  129 ccaattatgttcttcaccaaaagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaattcacaaca-ctatattatata 227  Q
    |||||||  ||||||||||||||||||    |||||| ||||||||| | ||||||| ||| ||||||||||||| |||||| || | ||||||||||||    
T  23154362 ccaattacattcttcaccaaaagactcggcttgactacgaatgcatggaattacaagcaaaaactcaacaatgcacaattcaaaaaaactatattatata 23154263  T
Q  228 atccagcccatcatataatatcttcaccaaa-actcaccattgcatcatcaagcatttacatccatacaatcaacaagtcataat 311  Q
    ||| |  |||||||||||||||||||| ||| || | |  |||||| |||||| ||||||||||||| |||||||||||||||||    
T  23154262 atctacaccatcatataatatcttcacgaaacacccccgtttgcattatcaagtatttacatccataaaatcaacaagtcataat 23154178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 129 - 311
Target Start/End: Complemental strand, 23565619 - 23565435
Alignment:
Q  129 ccaattatgttcttcaccaaaagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaattcacaaca-ctatattatata 227  Q
    |||||||  ||||||||||||||||||    |||||| ||||||||| | ||||||| ||| ||||||||||||| |||||| || | ||||||||||||    
T  23565619 ccaattacattcttcaccaaaagactcggcttgactacgaatgcatggaattacaagcaaaaactcaacaatgcacaattcaaaaaaactatattatata 23565520  T
Q  228 atccagcccatcatataatatcttcaccaaa-actcaccattgcatcatcaagcatttacatccatacaatcaacaagtcataat 311  Q
    ||| |  |||||||||||||||||||| ||| || | |  |||||| |||||| ||||||||||||| |||||||||||||||||    
T  23565519 atctacaccatcatataatatcttcacgaaacacccccgtttgcattatcaagtatttacatccataaaatcaacaagtcataat 23565435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 145 - 310
Target Start/End: Complemental strand, 18331875 - 18331709
Alignment:
Q  145 ccaaaagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaattcacaacactatattatataatccagcccatcatata 244  Q
    ||||||||||||| ||||||||| ||||||| |||| ||||||||||||| |||||||| || |||| | |||||||||||||||  |  ||||||||||    
T  18331875 ccaaaagactcaacatgactatggatgcatggactttcaagtaaagactcgacaatgcacaaatcaccaaactatattatataatttacaccatcatata 18331776  T
Q  245 atatcttcaccaaaactcacca-ttgcatcatcaagcatttacatccatacaatcaacaagtcataa 310  Q
    ||||||||| ||||   ||||| |||||| || |||  |||||||||| ||||||||||| ||||||    
T  18331775 atatcttcatcaaacaccaccatttgcattattaagtgtttacatccacacaatcaacaattcataa 18331709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 164 - 328
Target Start/End: Complemental strand, 39668737 - 39668573
Alignment:
Q  164 tatgaatgcatgaacttacaagtaaagactcaacaatgcaaaattca-caacactatattatataatccagcccatcatataatatcttcaccaaaactc 262  Q
    |||||||||||| |||| ||||||||||||| |||||||| || ||| |||  | |||||||| ||| ||  ||||||||||||||||||| || |  ||    
T  39668737 tatgaatgcatggactttcaagtaaagactcgacaatgcacaaatcagcaattccatattatacaattcacaccatcatataatatcttcatcatat-tc 39668639  T
Q  263 accatt-gcatcatcaagcatttacatccatacaatcaacaagtcataatcaacgaaagagtcatca 328  Q
    |||||| |||| ||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||    
T  39668638 accatttgcattatcaagcatttacatccatacaatcaacaggtcataattaac-aaagagtcatca 39668573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 417 - 511
Target Start/End: Original strand, 13807321 - 13807415
Alignment:
Q  417 aatagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    ||||||||||| |||| ||||||||||| || ||||||||||||| |||||||||  |||| || |||||||||||| |||||||||||||||||    
T  13807321 aatagggatgtaaatggatatccatggacgcggatagtgtgatatctgtgtccgcctcgttagaaaaatatgaaatccgtatcctatccatatcc 13807415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 423 - 510
Target Start/End: Complemental strand, 45151595 - 45151508
Alignment:
Q  423 gatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatc 510  Q
    ||||| |||| ||||||||| |||| |||||||||||||  |||||||||| ||| ||||||||||||||||||||||||| ||||||    
T  45151595 gatgtaaatggatatccatgcatgcggatagtgtgatatccgtgtccgctctgttagataaatatgaaatctgtatcctattcatatc 45151508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 419 - 512
Target Start/End: Complemental strand, 42625391 - 42625299
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcca 512  Q
    ||||||||| |||| |||||||||||||| || ||||||||||  |||||| ||| ||| ||||||||||||||| ||| ||||||||||||||    
T  42625391 tagggatgtaaatggatatccatggatgcggagagtgtgatatccgtgtccactc-gttagataaatatgaaatccgtaccctatccatatcca 42625299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 429 - 511
Target Start/End: Complemental strand, 13626664 - 13626582
Alignment:
Q  429 aatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    |||| |||||||| ||||| |||||||||||||  ||||||| | |||| ||||||||||||||| ||| |||||||||||||    
T  13626664 aatggatatccatagatgcggatagtgtgatattcgtgtccgtttcgttagataaatatgaaatccgtaccctatccatatcc 13626582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 422 - 511
Target Start/End: Original strand, 5938489 - 5938578
Alignment:
Q  422 ggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    |||||| |||| |||||||||||||   ||||||||||||  |||||| ||||||| ||||||||||||||  ||| |||||||||||||    
T  5938489 ggatgtaaatggatatccatggatgtgaatagtgtgatatccgtgtccactccgttagataaatatgaaattcgtaccctatccatatcc 5938578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 419 - 509
Target Start/End: Original strand, 5109959 - 5110048
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatat 509  Q
    ||||||||| |||  ||||||||| |||| ||||||||||||| ||||| ||||| ||  ||||||||||||||| |||| ||||||||||    
T  5109959 tagggatgtaaatagatatccatg-atgcggatagtgtgatatttgtgtgcgctctgtcagataaatatgaaatccgtattctatccatat 5110048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 153 - 203
Target Start/End: Original strand, 22576696 - 22576745
Alignment:
Q  153 ctcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgca 203  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  22576696 ctcaatatgactatgaatgcatgaactt-caagtaaggactcaacaatgca 22576745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 449 - 510
Target Start/End: Original strand, 31604613 - 31604674
Alignment:
Q  449 gatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatc 510  Q
    ||||||||||||| |||||| ||||||||||||||||||||||| |||| | |||| |||||    
T  31604613 gatagtgtgatatttgtgtctgctccgttggataaatatgaaatttgtaccttatctatatc 31604674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 24276541 - 24276598
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaat 207  Q
    ||||||||| |||||||||| ||||||||| |||||| |||||||| ||||||||||||    
T  24276541 aagactcaacatgactatga-tgcatgaacatacaagcaaagactcgacaatgcaaaat 24276598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 25304223 - 25304278
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaa 205  Q
    ||||||||| |||||||||| |||||| || ||||||||| ||||||||||||||||    
T  25304223 aagactcaacatgactatga-tgcatggacatacaagtaaggactcaacaatgcaaa 25304278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 45619552 - 45619497
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaa 205  Q
    ||||||||||||||||||| ||||||| || |||||| |||||||| ||||||||||    
T  45619552 aagactcaatatgactatg-atgcatggacatacaagcaaagactcgacaatgcaaa 45619497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 22137335 - 22137281
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaa 204  Q
    ||||||||| |||||||| |||||||| || |||||| ||||||||||||||||||    
T  22137335 aagactcaacatgactat-aatgcatggacatacaagcaaagactcaacaatgcaa 22137281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 23823028 - 23822974
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaa 204  Q
    ||||||||| |||||||||| |||||| || ||||||||| |||||||||||||||    
T  23823028 aagactcaaaatgactatga-tgcatggacatacaagtaaggactcaacaatgcaa 23822974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 23824972 - 23824918
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaa 204  Q
    ||||||||| |||||||||| |||||| || ||||||||| |||||||||||||||    
T  23824972 aagactcaaaatgactatga-tgcatggacatacaagtaaggactcaacaatgcaa 23824918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 23832107 - 23832053
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaa 204  Q
    ||||||||| |||||||||| |||||| || ||||||||| |||||||||||||||    
T  23832107 aagactcaaaatgactatga-tgcatggacatacaagtaaggactcaacaatgcaa 23832053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 19434979 - 19434922
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaat 207  Q
    ||||||||| |||||||||| |||||| || |||||| |||||||| ||||||||||||    
T  19434979 aagactcaacatgactatga-tgcatggacatacaagcaaagactcgacaatgcaaaat 19434922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 24562383 - 24562326
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaat 207  Q
    ||||||||| |||||||||| ||||||||| |||||| ||| |||| ||||||||||||    
T  24562383 aagactcaacatgactatga-tgcatgaacatacaagcaaatactcgacaatgcaaaat 24562326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 463 - 511
Target Start/End: Original strand, 5704398 - 5704446
Alignment:
Q  463 tgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    |||||||||||| || |||||||||||||||||||  ||||| ||||||    
T  5704398 tgtgtccgctccattagataaatatgaaatctgtactctatctatatcc 5704446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 151 - 207
Target Start/End: Original strand, 6093508 - 6093563
Alignment:
Q  151 gactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaat 207  Q
    ||||||||||||||||| ||||||| || |||||| | |||||||| ||||||||||    
T  6093508 gactcaatatgactatg-atgcatggacatacaagcacagactcaataatgcaaaat 6093563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 96; Significance: 9e-47; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 139 - 384
Target Start/End: Complemental strand, 13908599 - 13908353
Alignment:
Q  139 tcttcaccaaaagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaattca-caacactatattatataatccagccca 237  Q
    ||||||||||| ||||| | ||| |||  |||||||| |||| ||||||||||||| |||||||| || ||| | |  |||||||||| ||| ||  |||    
T  13908599 tcttcaccaaa-gactcgacatgcctacaaatgcatggactttcaagtaaagactcgacaatgcataaatcatcgattctatattatacaattcactcca 13908501  T
Q  238 tcatataatatcttcaccaaaactcaccattgcatcatcaagcatttacatccatacaatcaacaagtcataatcaacgaaagagtcatcaacataatca 337  Q
    |||||||||||||||| ||||| |||||||||||  |||||||||||||||||||||||| ||||||||||||||||| || ||||||||| |||| |||    
T  13908500 tcatataatatcttcaacaaaattcaccattgcagtatcaagcatttacatccatacaattaacaagtcataatcaaccaaggagtcatcatcatattca 13908401  T
Q  338 tc-ataaacaattatcacaactagaaaacaacatcgtttcacaaagca 384  Q
    || || ||||||||||||    || |||||||||||||||||||||||    
T  13908400 tcaatcaacaattatcaccttaaggaaacaacatcgtttcacaaagca 13908353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 129 - 388
Target Start/End: Original strand, 13933404 - 13933661
Alignment:
Q  129 ccaattatgttcttcaccaaaagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaattcacaacactatattatataa 228  Q
    ||||||| ||||||||||||| ||||||| ||||||||||||||||| ||||||||| ||||||||| ||||||| || |||| | ||||||||||| ||    
T  13933404 ccaattacgttcttcaccaaa-gactcaacatgactatgaatgcatggacttacaagcaaagactcagcaatgcacaaatcacca-actatattatacaa 13933501  T
Q  229 tccagcccatcatataatatcttcaccaaaactcacca-ttgcatcatcaagcatttacatccatacaatcaacaagtcataatcaacgaaagagtcatc 327  Q
    |  |  |||||||||||||| |||||  ||   ||||| |||||| |||||| |||||||| || ||||||||||||||||||||||| |||||||||||    
T  13933502 tttacaccatcatataatatattcactgaacaccaccatttgcattatcaagtatttacattcacacaatcaacaagtcataatcaac-aaagagtcatc 13933600  T
Q  328 aacataatcatcataaacaattatcacaactagaaaacaacatcgtttcacaaagcacaat 388  Q
    | |||| |||  || || ||||||||  ||  | |||||||||||||||||||||||||||    
T  13933601 atcatattcaatatcaataattatcatcacagggaaacaacatcgtttcacaaagcacaat 13933661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 137 - 381
Target Start/End: Complemental strand, 1919964 - 1919720
Alignment:
Q  137 gttcttcaccaaaagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaattcac-aacactatattatataatccagcc 235  Q
    ||||||||||||  ||||| | ||||||||||||||||| |||||||||||||||||| ||| |||| || |||| ||  |||||||||| ||| ||  |    
T  1919964 gttcttcaccaag-gactcgacatgactatgaatgcatggacttacaagtaaagactcgaca-tgcacaaatcactaattctatattatacaattcactc 1919867  T
Q  236 catcatataatatcttcaccaaaactcaccattgcatcatcaagcatttacatccatacaa-tcaacaagtcataatcaacgaaagagtcatcaacataa 334  Q
    |||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||| | || |||||||||||||  |||||||||||||||||     
T  1919866 catcatataatatcttcatcaaagttcaccattgcatcatcaagcatttacatccatacaatttaaaaagtcataatcaa-taaagagtcatcaacatat 1919768  T
Q  335 tcatcataaacaattatcacaactagaaaacaac-atcgtttcacaaa 381  Q
    ||| ||| | ||| |||||| || || ||||||| | |||||||||||    
T  1919767 tcaccatcatcaactatcaccacaaggaaacaacaaacgtttcacaaa 1919720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 133 - 387
Target Start/End: Complemental strand, 12407804 - 12407549
Alignment:
Q  133 ttatgttcttcaccaaaagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaattcacaacactatattatataatcca 232  Q
    ||||||||||||||||| ||||| | ||||||||||||||||| || ||||||||||||||| |||||   ||||||| ||||||||||||||||||||     
T  12407804 ttatgttcttcaccaaa-gactcgacatgactatgaatgcatggacatacaagtaaagactcgacaataagaaattcataacactatattatataatccc 12407706  T
Q  233 gcc--catcatataatatcttca-ccaaaactcaccattgcatcatcaagcatttacatccatacaa-tcaacaagtcataatcaacgaaagagtcatca 328  Q
     ||  ||| ||||||||||||||   ||||||||||||||||| |||| |||||||||||||||||| ||||||||||||| | ||  | ||||||||||    
T  12407705 tccatcat-atataatatcttcataaaaaactcaccattgcattatcatgcatttacatccatacaattcaacaagtcatatttaa-tagagagtcatca 12407608  T
Q  329 acataatcatcataaacaattatcacaactagaaaacaacatcgtttcacaaagcacaa 387  Q
    |||||  |||| | ||||| ||| ||  | || |||||| ||| |||||||||||||||    
T  12407607 acatatccatcgtcaacaagtattacctcaaggaaacaaaatcatttcacaaagcacaa 12407549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 151 - 389
Target Start/End: Complemental strand, 16028822 - 16028583
Alignment:
Q  151 gactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaattcac-aacactatattatataatccagcccatcatataatatc 249  Q
    ||||||||||||| ||||||||||| |||| ||||||||||||| |||||||| || |||| ||  |||||||||| |||     | ||||||||||||     
T  16028822 gactcaatatgaccatgaatgcatggactttcaagtaaagactcgacaatgcacaaatcaccaatcctatattatacaatttttacaatcatataatata 16028723  T
Q  250 ttcaccaaaactcaccattgcatcatcaagcatttacatccatacaat-caacaagtcataatcaacgaaagagtcatcaacataatcatcataaacaat 348  Q
    |||||||||| |||||||||||| |||||| ||||||||| ||||||| ||||||||||| ||| || ||||| ||| || |||||||||||| |||||     
T  16028722 ttcaccaaaa-tcaccattgcattatcaagaatttacatctatacaattcaacaagtcatgatcgacaaaagattcaacatcataatcatcatcaacaag 16028624  T
Q  349 tatcacaactagaaaacaacatcgtttcacaaagcacaatt 389  Q
    ||| || || || |||||| || ||||||||| ||||||||    
T  16028623 tatgaccacgaggaaacaatattgtttcacaaggcacaatt 16028583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 22 - 343
Target Start/End: Original strand, 12459186 - 12459512
Alignment:
Q  22 tctacatacatgtggtatcaattttggatt-cagatataattttaccaagtaatccactaacgtaatcccct-tcgattacgttcttcatcaactaacat 119  Q
    ||||||| ||||||||| |||||||||||| | ||  |||| ||||| ||| |||||||||||||| ||| | | |||| ||||||||| |||||||| |    
T  12459186 tctacatgcatgtggtaccaattttggatttcggaggtaatcttaccgagtgatccactaacgtaaacccttatggatt-cgttcttcaccaactaacgt 12459284  T
Q  120 aatcctcctcca-attatgttcttcaccaaaagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaattcacaacacta 218  Q
    || | || | |  |||  ||||||| ||||| ||||||| ||||||||||||||||| ||||| |||||||||||| ||||| | |||||||||||||||    
T  12459285 aaac-tcttacggatttcgttcttcgccaaa-gactcaacatgactatgaatgcatggacttagaagtaaagactcgacaatacgaaattcacaacacta 12459382  T
Q  219 tattatataatccagcccatcatataata---tcttcaccaaaactcacca-ttgcatcatcaagcatttacatccatacaatcaacaagtcataatca- 313  Q
    ||||||||||| ||  |||| ||||||||   ||||||||||||| || || || ||| |||||| || ||||||||||||  ||||||||||| ||||     
T  12459383 tattatataattcacaccataatataataatgtcttcaccaaaacccatcattttcattatcaagtatctacatccatacatacaacaagtcatcatcac 12459482  T
Q  314 -acgaaagagtcatcaacataatcatcataa 343  Q
     |  ||||||||||||| || ||||||||||    
T  12459483 caaaaaagagtcatcaa-atcatcatcataa 12459512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 96 - 311
Target Start/End: Complemental strand, 11923663 - 11923444
Alignment:
Q  96 attacgttcttcatcaactaacataatc--ctcctccaattatgttcttcaccaaaagactcaatatgactatgaatgcatgaacttacaagtaaagact 193  Q
    |||||||||||||||||||||  ||||   | || | |||||  ||||||||||||| |||| | |||||| |||||||||| |||| ||||||||||||    
T  11923663 attacgttcttcatcaactaatgtaataaacaccacaaattacattcttcaccaaaaaactcgacatgactgtgaatgcatggactttcaagtaaagact 11923564  T
Q  194 caacaatgcaaaattca-caacactatattatataatccagcccatcatataatatcttcaccaaaactcacca-ttgcatcatcaagcatttacatcca 291  Q
    | |||||||| || ||| ||| |||||||||||||||  |  ||| ||||||||||||||||||||   ||||| |||||| |||||| | |||||||||    
T  11923563 cgacaatgcacaaatcaccaaaactatattatataatttacaccaccatataatatcttcaccaaacaccaccatttgcattatcaagtacttacatcca 11923464  T
Q  292 tacaatcaacaagtcataat 311  Q
     |||||||||||||||||||    
T  11923463 cacaatcaacaagtcataat 11923444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 216 - 399
Target Start/End: Original strand, 17378595 - 17378777
Alignment:
Q  216 ctatattatataatccagcccatcatataatatcttcaccaaaactcaccatt-gcatcatcaagcatttacatccatacaatcaacaagtcataatcaa 314  Q
    |||||||||| ||| ||  |||||||||||||||||| ||| |  |||||||| |||| |||||  ||||||||| | | ||||||||||||||||||||    
T  17378595 ctatattatacaattcacaccatcatataatatcttcgccatat-tcaccattagcattatcaaatatttacatcgacagaatcaacaagtcataatcaa 17378693  T
Q  315 cgaaagagtcatcaacataatcatcataaacaattatcacaactagaaaacaacatcgtttcacaaagcacaattgacaaataga 399  Q
    | ||||||||||||||| ||||||||| |||| ||||  | || || |||||||||||||||||||| ||||||| |||||||||    
T  17378694 caaaagagtcatcaacaaaatcatcatcaacatttattgccacaag-aaacaacatcgtttcacaaaacacaattcacaaataga 17378777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 420 - 513
Target Start/End: Original strand, 51356934 - 51357027
Alignment:
Q  420 agggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatccac 513  Q
    |||||||| |||| |||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||| |||  |||||||||||||||    
T  51356934 agggatgtaaatggatatccatggatgcggatagtgtgatatctgtgtccgctccgttggacaaatatgaaatttgtgccctatccatatccac 51357027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 136 - 388
Target Start/End: Original strand, 20847541 - 20847794
Alignment:
Q  136 tgttcttcaccaaaagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaattcac-aacactatattatataatccagc 234  Q
    |||||||||||| | ||||| ||||| | ||||||||||| |||| |||||||| |||| |||||||| || |||| ||   |||||||||||||         
T  20847541 tgttcttcaccata-gactcgatatgtcaatgaatgcatggacttccaagtaaaaactcgacaatgcacaaatcaccaattgtatattatataattttca 20847639  T
Q  235 ccatcatataatatcttcaccaaaactcaccattgcatcatcaagcatttacatccatacaat-caacaagtcataatc-aacgaaagagtcatcaacat 332  Q
    ||||||||||||||||||||||||  |||||||||||| |||||||||| || |||||||||| ||||||||||||| | ||| ||| |||||||| ||     
T  20847640 ccatcatataatatcttcaccaaat-tcaccattgcattatcaagcattaacgtccatacaattcaacaagtcataaaccaacaaaaaagtcatcaccaa 20847738  T
Q  333 aatcatcataaacaattatcacaactagaaaacaacatcgtttcacaaagcacaat 388  Q
    |  |||||| || | | ||||| || |  |||||| ||||||||||| ||||||||    
T  20847739 agccatcatcaatattcatcaccacaaagaaacaatatcgtttcacatagcacaat 20847794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 419 - 492
Target Start/End: Original strand, 23626606 - 23626679
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaat 492  Q
    ||||||||| |||| ||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||    
T  23626606 tagggatgtaaatggatatccatggatgcaaatagtgtgatatttgtgtccgctccgtcggataaatatgaaat 23626679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 419 - 511
Target Start/End: Original strand, 41039084 - 41039176
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    ||||||||| |||| |||||||||||||| |||| ||||||||  |||||||||||||| ||||||||||||||| ||| | |||||||||||    
T  41039084 tagggatgtaaatggatatccatggatgcggataatgtgatatccgtgtccgctccgttagataaatatgaaatccgtaccatatccatatcc 41039176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 419 - 510
Target Start/End: Original strand, 22278061 - 22278152
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatc 510  Q
    ||||||||| |||| ||||||||||||| ||||| | ||||||  ||||||| |||||||||||||||||||||| ||| |||||| |||||    
T  22278061 tagggatgtaaatggatatccatggatgtagatattatgatatccgtgtccgttccgttggataaatatgaaatccgtaccctatcaatatc 22278152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 419 - 511
Target Start/End: Complemental strand, 36465190 - 36465098
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    ||||||||| |||| ||||| | |||||| ||||||||||||| ||| |||||||||||||| ||||||||||||  | | ||||||||||||    
T  36465190 tagggatgtaaatggatatctacggatgcggatagtgtgatatttgtatccgctccgttggacaaatatgaaatcaatgttctatccatatcc 36465098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 423 - 511
Target Start/End: Complemental strand, 8819674 - 8819586
Alignment:
Q  423 gatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    ||||| |||| |||||||||||||| |||||||||||||  | |||| |||||||||| |||||||||||  ||  |||||||||||||    
T  8819674 gatgtaaatggatatccatggatgcggatagtgtgatattcgcgtccactccgttggacaaatatgaaattcgttccctatccatatcc 8819586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 419 - 510
Target Start/End: Original strand, 42555082 - 42555171
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatc 510  Q
    |||||||||  ||| |||||||||||||| ||||||||||| ||| |  |||||||||| |||||||||||||| ||||  |||||||||||    
T  42555082 tagggatgtagatggatatccatggatgcggatagtgtgatgtatat--ccgctccgtttgataaatatgaaatttgtactctatccatatc 42555171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 439 - 510
Target Start/End: Original strand, 19841513 - 19841584
Alignment:
Q  439 catggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatc 510  Q
    ||||||||| ||||||||||||| | ||||||||| || |||||||||||||||| ||| |||||| |||||    
T  19841513 catggatgcggatagtgtgatatctatgtccgctctgtcggataaatatgaaatccgtaccctatcgatatc 19841584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 110 - 229
Target Start/End: Original strand, 20881701 - 20881820
Alignment:
Q  110 caactaacataatcctcctccaa-ttatgttcttcaccaaaagac-tcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaat 207  Q
    |||||||||||||||  || ||| |||| ||||||||||||| || |||| ||||||||||||| |   | || ||||||||||||| |||||||| |||    
T  20881701 caactaacataatcc--ctacaagttattttcttcaccaaaaaacctcaacatgactatgaatgaaatgattttcaagtaaagactcgacaatgcataat 20881798  T
Q  208 tcacaacactatattatataat 229  Q
    ||||||| | ||||||||||||    
T  20881799 tcacaactcaatattatataat 20881820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 419 - 492
Target Start/End: Complemental strand, 40715223 - 40715150
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaat 492  Q
    ||||||||| |||| ||||||| ||||||||||||||||||||  ||||| | ||||||| |||| ||||||||    
T  40715223 tagggatgtaaatggatatccaaggatgcagatagtgtgatattcgtgtctgatccgttgaataagtatgaaat 40715150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 429 - 489
Target Start/End: Original strand, 24912927 - 24912987
Alignment:
Q  429 aatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatga 489  Q
    |||| ||||||||||| ||| ||||| |||||||||||||| || ||||||||||||||||    
T  24912927 aatggatatccatggacgcatatagtatgatatatgtgtccacttcgttggataaatatga 24912987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 429 - 489
Target Start/End: Original strand, 24916611 - 24916671
Alignment:
Q  429 aatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatga 489  Q
    |||| ||||||||||| ||||||||| ||||||  ||||||||| ||||||||||||||||    
T  24916611 aatggatatccatggacgcagatagtatgatatccgtgtccgcttcgttggataaatatga 24916671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 19557987 - 19558045
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaatt 208  Q
    ||||||||| |||||||||| |||||| || |||||| ||||||||||||||||||||||    
T  19557987 aagactcaacatgactatga-tgcatggacatacaagcaaagactcaacaatgcaaaatt 19558045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 17376993 - 17376936
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaat 207  Q
    ||||||||| | |||||||| ||||||||| ||||||||||||||| ||||||||||||    
T  17376993 aagactcaacacgactatga-tgcatgaacatacaagtaaagactcgacaatgcaaaat 17376936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 422 - 492
Target Start/End: Original strand, 38951375 - 38951445
Alignment:
Q  422 ggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaat 492  Q
    |||||| |||| |||||||||||||| || ||||||||||  ||||||| |||||| ||||||||| ||||    
T  38951375 ggatgtaaatggatatccatggatgcggagagtgtgatattcgtgtccgttccgttagataaatataaaat 38951445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 416 - 489
Target Start/End: Complemental strand, 42595889 - 42595816
Alignment:
Q  416 aaatagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatga 489  Q
    |||||||||||||||||  ||||||||||| | |||||| ||||||   |  ||||||||||||||||||||||    
T  42595889 aaatagggatgtcaatgggtatccatggatacggatagtatgatatccattcccgctccgttggataaatatga 42595816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 429 - 512
Target Start/End: Complemental strand, 40572259 - 40572178
Alignment:
Q  429 aatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcca 512  Q
    |||| |||||||||||||  |||||||||||||  |||||| ||||||| ||||||| |||||  | || ||||||||||||||    
T  40572259 aatggatatccatggatgtggatagtgtgatattcgtgtccactccgttagataaatgtgaaa--tttaccctatccatatcca 40572178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 34197679 - 34197625
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaa 204  Q
    ||||||||| |||||||||| |||||| || ||||||||| |||||||||||||||    
T  34197679 aagactcaacatgactatga-tgcatggacatacaagtaaggactcaacaatgcaa 34197625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 37958571 - 37958517
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaa 204  Q
    ||||||||| |||||||||| |||||| || ||||||||| |||||||||||||||    
T  37958571 aagactcaacatgactatga-tgcatggacatacaagtaaggactcaacaatgcaa 37958517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 5372208 - 5372151
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaat 207  Q
    ||||||||| |||||||||| ||||||||| |||||  |||||||| ||||||||||||    
T  5372208 aagactcaacatgactatga-tgcatgaacatacaacaaaagactcgacaatgcaaaat 5372151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 18275617 - 18275659
Alignment:
Q  266 attgcatcatcaagcatttacatccatacaatcaacaagtcat 308  Q
    ||||||| |||||||||||||||||| |||||||||| |||||    
T  18275617 attgcattatcaagcatttacatccacacaatcaacatgtcat 18275659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 24237545 - 24237602
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaat 207  Q
    ||||||||| |||||||||| |||||| || |||||| |||||||| ||||||||||||    
T  24237545 aagactcaacatgactatga-tgcatggacatacaagcaaagactcgacaatgcaaaat 24237602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 41257863 - 41257806
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaat 207  Q
    ||||||||| |||||||||| |||||| || |||||| |||||||| ||||||||||||    
T  41257863 aagactcaacatgactatga-tgcatggacatacaagcaaagactcgacaatgcaaaat 41257806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 54365084 - 54365027
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaat 207  Q
    ||||||||| |||||||||| |||||| || |||||| |||||||| ||||||||||||    
T  54365084 aagactcaacatgactatga-tgcatggacatacaagcaaagactcgacaatgcaaaat 54365027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 12407907 - 12407858
Alignment:
Q  19 acttctacatacatgtggtatcaa-ttttggattcagatataattttacc 67  Q
    |||||||||| ||||||||| ||| ||||||||||||| |||||||||||    
T  12407907 acttctacatgcatgtggtaccaagttttggattcagagataattttacc 12407858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 267 - 311
Target Start/End: Complemental strand, 10115753 - 10115709
Alignment:
Q  267 ttgcatcatcaagcatttacatccatacaatcaacaagtcataat 311  Q
    |||||| ||||||  |||||||||| |||||||||||||||||||    
T  10115753 ttgcattatcaagtttttacatccacacaatcaacaagtcataat 10115709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 454 - 514
Target Start/End: Complemental strand, 17120625 - 17120565
Alignment:
Q  454 tgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatccacg 514  Q
    ||||||||||||||| | ||| ||||| ||||||||||| |||| | ||| ||||||||||    
T  17120625 tgtgatatatgtgtctgttccattggacaaatatgaaatttgtaccatattcatatccacg 17120565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 266 - 302
Target Start/End: Original strand, 38763582 - 38763618
Alignment:
Q  266 attgcatcatcaagcatttacatccatacaatcaaca 302  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  38763582 attgcattatcaagcatttacatccacacaatcaaca 38763618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 22 - 259
Target Start/End: Original strand, 3264 - 3500
Alignment:
Q  22 tctacatacatgtggtatcaat--tttggattcagatataatt-ttaccaagtaatccactaacgtaatccccttcgattacgttcttcatcaactaaca 118  Q
    |||| |||||||||||| ||||  |||||||||||| |||| | |||||||||| |||||| ||||||||||||   |||||||||| || ||| |||||    
T  3264 tctagatacatgtggtaccaatattttggattcagagataactattaccaagta-tccactgacgtaatcccctcaaattacgttctgcaccaattaaca 3362  T
Q  119 taatcctcctccaattatgttcttcaccaaaagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaattcacaacacta 218  Q
     ||||| ||||  |||||||| ||||||||| ||||| |||||||||||||||||||  | ||||||||||||||| ||||| |  | |||| ||||||     
T  3363 caatcc-cctcagattatgttgttcaccaaa-gactcgatatgactatgaatgcatggccatacaagtaaagactcgacaatac-gatttcagaacactg 3459  T
Q  219 tattatataatccagcccatcatataatatcttcaccaaaa 259  Q
    ||||||||||| |   |||||||||||||||||||||||||    
T  3460 tattatataattccctccatcatataatatcttcaccaaaa 3500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 3507 - 3603
Alignment:
Q  293 acaatcaacaagtcataatcaacgaaagagtcatcaacataatcatcataaacaattatcacaactagaaaacaacatcgtttcacaaagcacaatt 389  Q
    ||||||||||||||||||||| | |||||||||||| |||||||||||| | |||||||||| || || ||||||||| |||||| || ||||||||    
T  3507 acaatcaacaagtcataatcatcaaaagagtcatcatcataatcatcatcatcaattatcaccacaaggaaacaacattgtttcataaggcacaatt 3603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 133 - 314
Target Start/End: Complemental strand, 10979 - 10798
Alignment:
Q  133 ttatgttcttcaccaaaagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaattcacaacactatattatataatcca 232  Q
    ||||||||||||||||| || |  | |||||||| |||||||| ||  |||||||||||||| ||||||  ||||||| ||| ||||||||||||||||     
T  10979 ttatgttcttcaccaaa-gattacacatgactataaatgcatggacaaacaagtaaagactcgacaatgtgaaattcataacgctatattatataatcc- 10882  T
Q  233 gcccatcatataatatcttcacca-aaactcaccattgcatcatcaagcatttacatccatacaa-tcaacaagtcataatcaa 314  Q
      |||||||||||||||||||||| |||| ||||||||||| ||||| |||||||||||| |||| ||||||||||||| ||||    
T  10881 ctccatcatataatatcttcaccagaaacccaccattgcattatcaaacatttacatccacacaattcaacaagtcatattcaa 10798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 7e-29; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 137 - 328
Target Start/End: Complemental strand, 17301748 - 17301558
Alignment:
Q  137 gttcttcaccaaaagactcaatatgactatgaa-tgcatgaacttacaagtaaagactcaacaatgcaaaattcac-aacactatattatataatccagc 234  Q
    ||||||||||| | ||||| |||||||||| || ||||||||||| ||||||||||||||||| |||| || |||| ||  |||||||||  |||   |     
T  17301748 gttcttcaccata-gactcgatatgactataaaatgcatgaactttcaagtaaagactcaacagtgcacaaatcaccaattctatattattaaattt-ga 17301651  T
Q  235 ccatcatataatatcttcaccaaaactcaccattgcatcatcaagcatttacatccatacaatcaacaagtcataatcaacgaaagagtcatca 328  Q
    ||||||||||||||||||| ||||  |||||||||||| |||||| ||||||||||||||||||||||||| || |||||| ||||| ||||||    
T  17301650 ccatcatataatatcttcatcaaat-tcaccattgcattatcaagtatttacatccatacaatcaacaagttatgatcaacaaaagattcatca 17301558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 423 - 511
Target Start/End: Complemental strand, 35188969 - 35188881
Alignment:
Q  423 gatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    ||||| |||| |||||||||||||| |||||||||||||  |||||||||||||| |||||||||||||||||||||||||| ||||||    
T  35188969 gatgtaaatggatatccatggatgcggatagtgtgatattcgtgtccgctccgttagataaatatgaaatctgtatcctatctatatcc 35188881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 432 - 511
Target Start/End: Original strand, 42836746 - 42836825
Alignment:
Q  432 gaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||| | |||||||||||    
T  42836746 gaatatccatggatgcggatagtgtgatatctgtgtccgctccgttagataaatatgaaatatgtaccatatccatatcc 42836825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 419 - 512
Target Start/End: Complemental strand, 39800781 - 39800688
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcca 512  Q
    ||||||||| |||| |||||||||||||| |||||||||||||  |||||| ||||||| ||||||||| ||||| ||| ||||||||||||||    
T  39800781 tagggatgtaaatggatatccatggatgcggatagtgtgatatccgtgtccactccgttagataaatataaaatccgtaccctatccatatcca 39800688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 421 - 511
Target Start/End: Complemental strand, 39207473 - 39207383
Alignment:
Q  421 gggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    ||||||| |||| |||||||||||||| |||||||||||||  ||||| |||||||| ||||||||||||||| ||| ||| |||||||||    
T  39207473 gggatgtaaatggatatccatggatgcggatagtgtgatatccgtgtctgctccgttagataaatatgaaatccgtaccctttccatatcc 39207383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 434 - 511
Target Start/End: Original strand, 3925977 - 3926054
Alignment:
Q  434 atatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    |||||||||||||  ||||||||||||| ||||||||||||||| ||||||||||||||| ||| | |||||||||||    
T  3925977 atatccatggatgtggatagtgtgatatttgtgtccgctccgttagataaatatgaaatccgtaccatatccatatcc 3926054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 419 - 512
Target Start/End: Original strand, 40056734 - 40056827
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcca 512  Q
    ||||||||| |||| |||||||||||||| |||||||||||||  || ||| ||||||| ||||||||||||||  ||| ||||||||||||||    
T  40056734 tagggatgtaaatggatatccatggatgcggatagtgtgatatccgtttccactccgttagataaatatgaaattcgtaccctatccatatcca 40056827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 267 - 328
Target Start/End: Complemental strand, 24851853 - 24851792
Alignment:
Q  267 ttgcatcatcaagcatttacatccatacaatcaacaagtcataatcaacgaaagagtcatca 328  Q
    |||||| |||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  24851853 ttgcattatcaagtatttacatccacacaatcaacaagtcataatcaacaaaagagtcatca 24851792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 419 - 511
Target Start/End: Original strand, 23428985 - 23429077
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    ||||||||| |||  |||| ||||||||| |||||||||||||   |||| |||||| | ||||||||||||||| ||| |||||||||||||    
T  23428985 tagggatgtaaatagatattcatggatgcggatagtgtgatatccttgtctgctccgatagataaatatgaaatccgtaccctatccatatcc 23429077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 144 - 205
Target Start/End: Original strand, 13793783 - 13793843
Alignment:
Q  144 accaaaagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaa 205  Q
    |||| ||||||||| |||||||||| ||||||||| ||||||||| ||||||||||||||||    
T  13793783 accacaagactcaacatgactatga-tgcatgaacatacaagtaaggactcaacaatgcaaa 13793843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 419 - 493
Target Start/End: Original strand, 26621224 - 26621298
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatc 493  Q
    ||||||||| ||||||||||  || ||||||||||||||||||  |||||| ||||| |  ||||||||||||||    
T  26621224 tagggatgtaaatgaatatctttgaatgcagatagtgtgatatccgtgtccactccgctaaataaatatgaaatc 26621298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 19860891 - 19860946
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaa 205  Q
    ||||||||| |||||||||| |||||| || ||||||||| ||||||||||||||||    
T  19860891 aagactcaacatgactatga-tgcatggacatacaagtaaggactcaacaatgcaaa 19860946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 32967682 - 32967628
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaa 204  Q
    ||||||||| |||||||||| |||||| || ||||||||| |||||||||||||||    
T  32967682 aagactcaacatgactatga-tgcatggacatacaagtaaggactcaacaatgcaa 32967628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 511
Target Start/End: Complemental strand, 33743089 - 33743005
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    ||||||||| |||| |||||||||||||| ||||||||||||        |||||||||  ||||||||| |||| ||| |||||||||||||    
T  33743089 tagggatgtaaatggatatccatggatgcggatagtgtgata--------cgctccgttacataaatatgtaatccgtaccctatccatatcc 33743005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 24226977 - 24226920
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaat 207  Q
    ||||||||| ||||| |||| ||||||||| |||||| |||||||| ||||||||||||    
T  24226977 aagactcaacatgaccatga-tgcatgaacatacaagcaaagactcgacaatgcaaaat 24226920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 419 - 489
Target Start/End: Original strand, 35505720 - 35505790
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatga 489  Q
    |||||||||||||||||||| || ||| || ||||| || ||  ||| |||| ||||||||||||||||||    
T  35505720 tagggatgtcaatgaatatctatagatacaaatagtatggtacttgtttccgttccgttggataaatatga 35505790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 151 - 207
Target Start/End: Original strand, 21108213 - 21108268
Alignment:
Q  151 gactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaat 207  Q
    ||||||||||||||||| ||||||| ||  ||||| |||||||||| ||||||||||    
T  21108213 gactcaatatgactatg-atgcatggacacacaagcaaagactcaataatgcaaaat 21108268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 72 - 315
Target Start/End: Original strand, 46827 - 47067
Alignment:
Q  72 aatccactaacgtaatccc-cttcgattacgttcttcatcaactaacataatcctcctccaattatgttcttcaccaaaagactcaatatgactatgaat 170  Q
    ||||||||||||||||  | || ||||||||||||||| ||| ||||||| |    |||| | ||||||||| |||||  ||||||| ||||||||||||    
T  46827 aatccactaacgtaatttctctccgattacgttcttcaccaa-taacatagtttctctccgactatgttcttgaccaa--gactcaacatgactatgaat 46923  T
Q  171 gcatgaacttacaagtaaagactcaacaatgcaaaattcacaacactatattatataatccagcccatcatataatatcttcaccaaaactcacca-ttg 269  Q
    ||||| |||  || |||||||| | |||||||| || |||| | | | |  |||| ||| ||  ||||||||||||||||||||||||| |||||| |||    
T  46924 gcatggactc-catgtaaagacccgacaatgcataaatcaccaaattct--tatacaattcacaccatcatataatatcttcaccaaaattcaccatttg 47020  T
Q  270 catcatcaagcatttacatccatacaa-tcaacaagtcataatcaac 315  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||    
T  47021 catcatcaagaatttacatccatacaactcaacaagtcataatcaac 47067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 3e-28; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 419 - 511
Target Start/End: Complemental strand, 29678695 - 29678603
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    ||||||||| |||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||  || |||||||||||||    
T  29678695 tagggatgtaaatggatatccattgatgcagatagtatgatatatgtgtccgctccgttggataaatatgaaatccataccctatccatatcc 29678603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 419 - 512
Target Start/End: Complemental strand, 25294301 - 25294208
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcca 512  Q
    ||||||||| |||| |||||||||||||| |||||||||||||  |||||| ||||||| ||||||||||||||||||| ||||||||||||||    
T  25294301 tagggatgtaaatggatatccatggatgcggatagtgtgatatccgtgtccactccgttagataaatatgaaatctgtaccctatccatatcca 25294208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 418 - 511
Target Start/End: Complemental strand, 48379468 - 48379375
Alignment:
Q  418 atagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    |||||||||| |||| |||||||||||||| |||||||||| ||  |||||||||||||| ||||||||||||||| ||| | |||||||||||    
T  48379468 atagggatgtaaatggatatccatggatgcggatagtgtgaaatccgtgtccgctccgttagataaatatgaaatccgtaccatatccatatcc 48379375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 418 - 492
Target Start/End: Complemental strand, 19884784 - 19884710
Alignment:
Q  418 atagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaat 492  Q
    |||||||||| |||| |||| ||||||||| ||||||||||||| |||||||||||||||||| |||||||||||    
T  19884784 atagggatgtaaatggatattcatggatgcggatagtgtgatatctgtgtccgctccgttggacaaatatgaaat 19884710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 434 - 511
Target Start/End: Original strand, 47140554 - 47140631
Alignment:
Q  434 atatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    |||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||  |||| |||| ||||||    
T  47140554 atatccatggatgcggatagtgtgatattcgtgtccgctccgttggataaatatgaaatccatatcttatctatatcc 47140631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 419 - 511
Target Start/End: Original strand, 25987142 - 25987233
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    ||||||||| |||||||| ||||| |||  |||||||||||||| |||||||||||||| ||||| |||||||| |||||| |||||||||||    
T  25987142 tagggatgtaaatgaatacccatg-atgtggatagtgtgatatacgtgtccgctccgttagataagtatgaaatatgtatcttatccatatcc 25987233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 418 - 511
Target Start/End: Complemental strand, 2192164 - 2192071
Alignment:
Q  418 atagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    |||||||||| |||| || ||||||||||| |||| ||||||||  ||||||||||| || || ||||||||||||| | ||||||||||||||    
T  2192164 atagggatgtaaatggatgtccatggatgcggataatgtgatatccgtgtccgctccattagacaaatatgaaatctatgtcctatccatatcc 2192071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 418 - 510
Target Start/End: Complemental strand, 17563161 - 17563069
Alignment:
Q  418 atagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatc 510  Q
    |||||||||| |||| |||||||||||||| |||||||| |||| | ||||||||| ||| ||||||||| |||||  || ||||||||||||    
T  17563161 atagggatgtaaatggatatccatggatgcggatagtgtaatatctttgtccgctctgttagataaatataaaatccataccctatccatatc 17563069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 422 - 510
Target Start/End: Complemental strand, 31585604 - 31585516
Alignment:
Q  422 ggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatc 510  Q
    |||||| |||| |||||||||||||| |||||||| ||||   ||||||||||||| ||||||||| ||||| ||| ||||||||||||    
T  31585604 ggatgtaaatggatatccatggatgcggatagtgtaatatccttgtccgctccgttagataaatataaaatccgtaccctatccatatc 31585516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 419 - 511
Target Start/End: Complemental strand, 38264698 - 38264606
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    ||||||||| |||| |||| ||||||| | |||| ||||||||||||||||| |||||| || |||||||||||| ||  |||||||||||||    
T  38264698 tagggatgtaaatggatattcatggatacggatactgtgatatatgtgtccgttccgttagacaaatatgaaatccgtgccctatccatatcc 38264606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 429 - 510
Target Start/End: Complemental strand, 31293121 - 31293040
Alignment:
Q  429 aatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatc 510  Q
    |||||||||| |||||||| |||| |||||||| | | ||||||||||| ||||||||||||||| | | ||||||||||||    
T  31293121 aatgaatatctatggatgcggataatgtgatatttatatccgctccgttagataaatatgaaatccgcagcctatccatatc 31293040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 443 - 511
Target Start/End: Complemental strand, 36729104 - 36729036
Alignment:
Q  443 gatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcc 511  Q
    ||||| |||||||||||||  ||||||| |||||||||||||||||||||  ||| |||||| ||||||    
T  36729104 gatgcggatagtgtgatatccgtgtccgatccgttggataaatatgaaattcgtaccctatcaatatcc 36729036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 13378271 - 13378216
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaa 205  Q
    ||||||||| |||||||||| |||||| || ||||||||| ||||||||||||||||    
T  13378271 aagactcaacatgactatga-tgcatggacatacaagtaaggactcaacaatgcaaa 13378216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 510
Target Start/End: Original strand, 11894077 - 11894144
Alignment:
Q  443 gatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatc 510  Q
    ||||| |||||||| |||| |||||| | ||| |||||||||||||||||||||| | ||| ||||||    
T  11894077 gatgcggatagtgtaatatttgtgtctgttccattggataaatatgaaatctgtaccatattcatatc 11894144  T

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Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 36357847 - 36357793
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaa 204  Q
    ||||||||| |||||||||| ||||||||  ||||||||| |||||||||||||||    
T  36357847 aagactcaacatgactatga-tgcatgaatatacaagtaaggactcaacaatgcaa 36357793  T

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Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 5471893 - 5471836
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaat 207  Q
    ||||||||| |||||||||| |||||| || |||||| |||||||| ||||||||||||    
T  5471893 aagactcaacatgactatga-tgcatggacatacaagcaaagactcgacaatgcaaaat 5471836  T

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Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 17607737 - 17607779
Alignment:
Q  266 attgcatcatcaagcatttacatccatacaatcaacaagtcat 308  Q
    ||||||| |||||||||||||||||| |||||||||| |||||    
T  17607737 attgcattatcaagcatttacatccacacaatcaacatgtcat 17607779  T

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Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 151 - 207
Target Start/End: Original strand, 33396002 - 33396057
Alignment:
Q  151 gactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaat 207  Q
    ||||||||||||||||| ||||||| || |||||| ||||| |||| ||||||||||    
T  33396002 gactcaatatgactatg-atgcatggacatacaagcaaagaatcaataatgcaaaat 33396057  T

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Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 266 - 302
Target Start/End: Original strand, 52399427 - 52399463
Alignment:
Q  266 attgcatcatcaagcatttacatccatacaatcaaca 302  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  52399427 attgcattatcaagcatttacatccacacaatcaaca 52399463  T

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Target: scaffold0115 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 416 - 512
Target Start/End: Original strand, 21812 - 21908
Alignment:
Q  416 aaatagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcca 512  Q
    |||||||||||| |||| |||||||||||||| |||||||||||||  |||||| ||||||| ||||||||||||||| ||| ||||||||||||||    
T  21812 aaatagggatgtaaatggatatccatggatgcggatagtgtgatatccgtgtccactccgttagataaatatgaaatccgtaccctatccatatcca 21908  T

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Target: scaffold0691 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0691
Description:

Target: scaffold0691; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 416 - 512
Target Start/End: Original strand, 7665 - 7761
Alignment:
Q  416 aaatagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcca 512  Q
    |||||||||||| |||  |||||||||||||| |||||||||||||  |||||| ||||||| ||||||||||||||| ||| ||||||||||||||    
T  7665 aaatagggatgtaaatcgatatccatggatgcggatagtgtgatatccgtgtccactccgttagataaatatgaaatccgtaccctatccatatcca 7761  T

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Target: scaffold0155 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 419 - 512
Target Start/End: Complemental strand, 7253 - 7161
Alignment:
Q  419 tagggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatcca 512  Q
    |||| |||| |||| |||||||||||||||||||||||||||| ||| |||||| |||| ||||||||||||||  ||| |||||| |||||||    
T  7253 taggtatgtaaatggatatccatggatgcagatagtgtgatatctgtatccgct-cgttagataaatatgaaattcgtaccctatctatatcca 7161  T

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Target: scaffold0057 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 421 - 510
Target Start/End: Original strand, 66350 - 66439
Alignment:
Q  421 gggatgtcaatgaatatccatggatgcagatagtgtgatatatgtgtccgctccgttggataaatatgaaatctgtatcctatccatatc 510  Q
    ||||||| |||| || ||||||||||| ||||||||||||| |||||| ||||| ||||| ||||||||||||||   ||||||||||||    
T  66350 gggatgtaaatggatgtccatggatgcggatagtgtgatatttgtgtcagctccattggacaaatatgaaatctgagccctatccatatc 66439  T

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Target: scaffold0126 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 377
Target Start/End: Complemental strand, 34271 - 34157
Alignment:
Q  262 caccattgcatcatcaagcatttacatccatacaatcaacaagtcataatcaacgaaagagtcatcaacataatcatcataaacaattatcacaactaga 361  Q
    ||||||| ||| ||||||  ||||| ||||  |||||||||||||||| ||||  ||||||||||||||||| ||||||| ||||||||  || || ||     
T  34271 caccatttcattatcaagtttttacgtccacgcaatcaacaagtcatattcaat-aaagagtcatcaacatattcatcatcaacaattaataccacaagg 34173  T
Q  362 aaacaacatcgtttca 377  Q
    |||||| |||||||||    
T  34172 aaacaatatcgtttca 34157  T

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Target: scaffold0243 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 3805 - 3751
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaa 204  Q
    ||||||||| |||||||||| |||||| || ||||||||||||||| |||||||||    
T  3805 aagactcaacatgactatga-tgcatggacatacaagtaaagactcgacaatgcaa 3751  T

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Target: scaffold0138 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 23936 - 23882
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaa 204  Q
    ||||||||| |||||||||| |||||| || ||||||||| |||||||||||||||    
T  23936 aagactcaacatgactatga-tgcatgtacatacaagtaaggactcaacaatgcaa 23882  T

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Target: scaffold0111 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 297
Target Start/End: Original strand, 29079 - 29114
Alignment:
Q  262 caccattgcatcatcaagcatttacatccatacaat 297  Q
    |||||||||||||||||| |||||||||||||||||    
T  29079 caccattgcatcatcaagtatttacatccatacaat 29114  T

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Target: scaffold1869 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold1869
Description:

Target: scaffold1869; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 203
Target Start/End: Original strand, 955 - 1004
Alignment:
Q  153 ctcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgca 203  Q
    ||||| ||||||||||||||||| |||| ||||||||||||| ||||||||    
T  955 ctcaaaatgactatgaatgcatggactt-caagtaaagactcgacaatgca 1004  T

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Target: scaffold0412 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 203
Target Start/End: Original strand, 1804 - 1853
Alignment:
Q  153 ctcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgca 203  Q
    |||| ||||||||||||||||||||||| ||||||| ||||| ||||||||    
T  1804 ctcattatgactatgaatgcatgaactt-caagtaaggactcgacaatgca 1853  T

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Target: scaffold0357 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 6540 - 6582
Alignment:
Q  266 attgcatcatcaagcatttacatccatacaatcaacaagtcat 308  Q
    ||||||| |||||| |||||||||||||||||||||| |||||    
T  6540 attgcattatcaagaatttacatccatacaatcaacatgtcat 6582  T

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Target: scaffold0107 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 12238 - 12280
Alignment:
Q  266 attgcatcatcaagcatttacatccatacaatcaacaagtcat 308  Q
    ||||||| |||||||||||||||||| |||||||||| |||||    
T  12238 attgcattatcaagcatttacatccacacaatcaacatgtcat 12280  T

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Target: scaffold0080 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 25122 - 25065
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaat 207  Q
    ||||||||| |||||||||| |||||| || |||||| |||||||| ||||||||||||    
T  25122 aagactcaacatgactatga-tgcatggacatacaagcaaagactcgacaatgcaaaat 25065  T

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Target: scaffold0031 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 308
Target Start/End: Complemental strand, 98552 - 98510
Alignment:
Q  266 attgcatcatcaagcatttacatccatacaatcaacaagtcat 308  Q
    ||||||| |||||||||||||||||| |||||||||| |||||    
T  98552 attgcattatcaagcatttacatccacacaatcaacatgtcat 98510  T

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Target: scaffold0025 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 52096 - 52138
Alignment:
Q  266 attgcatcatcaagcatttacatccatacaatcaacaagtcat 308  Q
    ||||||| |||||||||||||||||| |||||||||| |||||    
T  52096 attgcattatcaagcatttacatccacacaatcaacatgtcat 52138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 85076 - 85133
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaat 207  Q
    ||||||||| ||||||||||| ||||| || |||||| |||||||| ||||||||||||    
T  85076 aagactcaacatgactatgaa-gcatggacatacaagcaaagactcgacaatgcaaaat 85133  T

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Target: scaffold1204 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold1204
Description:

Target: scaffold1204; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 1723 - 1668
Alignment:
Q  151 gactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaat 207  Q
    ||||||||||||||||| ||||||| || |||||| |||||||||| ||| ||||||    
T  1723 gactcaatatgactatg-atgcatggacatacaagcaaagactcaataatacaaaat 1668  T

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Target: scaffold0013 (Bit Score: 29; Significance: 0.0000009; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 10872 - 10817
Alignment:
Q  151 gactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaaat 207  Q
    ||||||||||||||||| ||||||| || |||||| ||||| |||| ||||||||||    
T  10872 gactcaatatgactatg-atgcatggacatacaagcaaagaatcaataatgcaaaat 10817  T

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Target: scaffold0013; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 34127 - 34182
Alignment:
Q  149 aagactcaatatgactatgaatgcatgaacttacaagtaaagactcaacaatgcaaa 205  Q
    ||||||||| |||||| ||| |||||| || ||||||||| ||||||||||||||||    
T  34127 aagactcaacatgactttga-tgcatggacatacaagtaaggactcaacaatgcaaa 34182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 221988 - 222029
Alignment:
Q  160 tgactatgaatgcatgaacttacaagtaaagactcaacaatgca 203  Q
    |||| ||||||||||||||  |||||||||||||||||||||||    
T  221988 tgaccatgaatgcatgaac--acaagtaaagactcaacaatgca 222029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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