View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7292_low_17 (Length: 253)
Name: NF7292_low_17
Description: NF7292
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7292_low_17 |
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Alignment Details
Target: chr1 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 16 - 250
Target Start/End: Complemental strand, 25575079 - 25574845
Alignment:
| Q |
16 |
aatatctgtattgtgattccatttctcccatccatcaaaaccttctttcctttctctttcgcccaatctgtcaaaaatcctcttaccttgcaactcatag |
115 |
Q |
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| T |
25575079 |
aatatctgtattgtgattccatttctcccatccatcaaaaccttctttcctttctctttcgcccaatttgtcaaaaatcctcttaccttgcaactcatag |
25574980 |
T |
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| Q |
116 |
gtatttccttttctttcaccacccctatcaaattttgcaaaatgtgactccggttgttgtttggaccacatcaaagtcaacagttccccacatatctttc |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25574979 |
gtatttccttttctttcaccacccctatcaaattttgcaaaatgtgactccggttgttgtttggaccacatcaaagtcaacagttccccacatatctttg |
25574880 |
T |
|
| Q |
216 |
tacctttcaattctctcaaagctttctccgcatcc |
250 |
Q |
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||||||||||||| ||||||||||||||||||||| |
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| T |
25574879 |
tacctttcaattccctcaaagctttctccgcatcc |
25574845 |
T |
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