View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7292_low_9 (Length: 364)
Name: NF7292_low_9
Description: NF7292
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7292_low_9 |
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Alignment Details
Target: chr4 (Bit Score: 315; Significance: 1e-177; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 14 - 348
Target Start/End: Original strand, 37159023 - 37159357
Alignment:
| Q |
14 |
atatactaaacactgtgaaggatatacataattgtttcatgaaagtataatgatttatattccttaatgactcaaagatcctagaagttacatggctttt |
113 |
Q |
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| T |
37159023 |
atatactaaacactgtgaaggatatacataattgtttcatgaaagtataatgatttatattccttaatgactcaaagatcctagaagttacatggctttt |
37159122 |
T |
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| Q |
114 |
attttgtagtcttagcaaccaacttaccacggcaggatgtgtcaaacattttctatgtcaaaacatgcagtacattttatcttctgaacaactaaacata |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |
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| T |
37159123 |
attttgtagtcttagcaaccaacttaccacggcaggatgtgtcaaacattttctatgtcaaaacatgcagtacattttatcgtcttaacaactaaacata |
37159222 |
T |
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| Q |
214 |
gaagcatgtcttaaaaggccacaataaagtattactgatttgtgccagaagctaaatccttaaagcaaagtaaagataaaaacctttgataaagggaaaa |
313 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||| |
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| T |
37159223 |
gaagcatgtcttaaaaggccacaataaagtattactgatttgtgccagaagctaaatccttaaatcaaagtacagataaacacctttgataaagggaaaa |
37159322 |
T |
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| Q |
314 |
ctagacaataatctaaagttttttaccattgttag |
348 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
37159323 |
ctagacaataatctaaagttttttaccattgttag |
37159357 |
T |
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