View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7293_low_21 (Length: 257)
Name: NF7293_low_21
Description: NF7293
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7293_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 77; Significance: 8e-36; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 89 - 165
Target Start/End: Original strand, 34402762 - 34402838
Alignment:
| Q |
89 |
gtgagatggcattcatatcaaacacaaacaatcaacgccatttacaaaaaccaatttttacatcataattaagaact |
165 |
Q |
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| T |
34402762 |
gtgagatggcattcatatcaaacacaaacaatcaacgccatttacaaaaaccaatttttacatcataattaagaact |
34402838 |
T |
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Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 34402872 - 34402921
Alignment:
| Q |
197 |
gaactaacattgccacccctccaaacttgataaagcctccttggtttcat |
246 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34402872 |
gaactaacattgccacccctccaaacttgataaagcctccttggtttcat |
34402921 |
T |
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