View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7293_low_31 (Length: 229)
Name: NF7293_low_31
Description: NF7293
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7293_low_31 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 7 - 229
Target Start/End: Complemental strand, 17155252 - 17155030
Alignment:
| Q |
7 |
aaatcatatgtcctaaagacaatttttatttttacaaaatgacctaaagacatatttaaaaagtgagttgagggatcgtatagattttcatacaaaaggt |
106 |
Q |
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| T |
17155252 |
aaatcatatgtcctaaagacaatttttatttttacaaaatgacctaaagacatatttaaaaagtgagttgagggatcgtatagattttcatacaaaaggt |
17155153 |
T |
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| Q |
107 |
gttatagttccattaatgatgaatctattcaattatagactacattaatcatatacattttcaaacaaaaggtgtaatagttctgtcaaaaataaaatgt |
206 |
Q |
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| T |
17155152 |
gttatagttccattaatggtgaacctattccattatagactacattaatcatatacattttcaaacaaaaggtgtaatagttctgtcaaaaataaaatgt |
17155053 |
T |
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| Q |
207 |
aatagttccattattcgtgaatc |
229 |
Q |
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||||||||||||||||||||||| |
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| T |
17155052 |
aatagttccattattcgtgaatc |
17155030 |
T |
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