View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7294_high_15 (Length: 344)
Name: NF7294_high_15
Description: NF7294
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7294_high_15 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 32 - 344
Target Start/End: Complemental strand, 31077401 - 31077090
Alignment:
| Q |
32 |
acacatgcacatattcctaatgcactcttggtgtaaaggaggggagcacatatattttggacaatgagagtttcttttgcaaaggatggaaactgctgtt |
131 |
Q |
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| T |
31077401 |
acacatgcacatattcctaatgcactcttggtgtaaaggaggggagcacatatattttggacaatgagagtttcttttgcaaaggatggaaactgctgtt |
31077302 |
T |
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| Q |
132 |
aaataagaacaaacaagttttactaaaacatgatgaaatattgtgtataagataaaattgaaactttaaaatggtgcaaaaaattacataccgctgttgg |
231 |
Q |
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| T |
31077301 |
aaataagaacaaacaagttttactaaaacatgatgaaatattgtgtataagataaaattcaaactttaaaatggtgca-aaaatgacataccgctgttgg |
31077203 |
T |
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| Q |
232 |
taacaacaagaaagataaaacgaaagataatcagaacgtaaaataaacttgagatttgaaccatatttttattcatttccatgtgataaataacatttta |
331 |
Q |
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| T |
31077202 |
tggtaacaagaaagataaaacgaaagatgatcagaacataaaataaacttgagatttgaaccatatttttcttcatttccatgtgataaatataaattta |
31077103 |
T |
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| Q |
332 |
ttttaccacactt |
344 |
Q |
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| T |
31077102 |
ttttaccacactt |
31077090 |
T |
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