View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7294_high_33 (Length: 227)

Name: NF7294_high_33
Description: NF7294
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7294_high_33
NF7294_high_33
[»] chr8 (3 HSPs)
chr8 (81-210)||(41481532-41481661)
chr8 (81-210)||(36167531-36167660)
chr8 (94-210)||(18951274-18951390)
[»] chr3 (6 HSPs)
chr3 (81-207)||(54967367-54967493)
chr3 (81-210)||(44782678-44782807)
chr3 (81-207)||(54979999-54980125)
chr3 (90-206)||(39298729-39298844)
chr3 (85-206)||(17645715-17645831)
chr3 (143-206)||(18556460-18556523)
[»] scaffold0479 (1 HSPs)
scaffold0479 (81-210)||(2653-2782)
[»] chr7 (9 HSPs)
chr7 (81-210)||(4835727-4835856)
chr7 (81-210)||(25857282-25857411)
chr7 (81-210)||(4842802-4842931)
chr7 (81-210)||(24379432-24379561)
chr7 (92-210)||(13465110-13465228)
chr7 (81-210)||(4603594-4603721)
chr7 (113-206)||(17845803-17845896)
chr7 (90-206)||(27341089-27341203)
chr7 (85-165)||(38994237-38994317)
[»] chr4 (3 HSPs)
chr4 (81-210)||(42682985-42683114)
chr4 (81-207)||(9757370-9757496)
chr4 (90-206)||(37287038-37287155)
[»] scaffold0003 (1 HSPs)
scaffold0003 (81-210)||(342369-342498)
[»] scaffold0045 (1 HSPs)
scaffold0045 (95-206)||(26643-26754)
[»] chr2 (1 HSPs)
chr2 (81-206)||(37037848-37037973)
[»] chr5 (2 HSPs)
chr5 (81-210)||(16698413-16698539)
chr5 (148-210)||(22763967-22764029)
[»] chr1 (1 HSPs)
chr1 (90-206)||(27642044-27642160)
[»] chr6 (2 HSPs)
chr6 (145-210)||(22981494-22981559)
chr6 (145-210)||(23806849-23806914)


Alignment Details
Target: chr8 (Bit Score: 118; Significance: 2e-60; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 81 - 210
Target Start/End: Original strand, 41481532 - 41481661
Alignment:
Q  81 ttttcttgcgagagaaatagtgagccaatttgtgagagtgttccttacaaattgagaaatatattgtagtgagatccacctaagggtgaagttgttgtat 180  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  41481532 ttttcttgtgagagaaatagtgagccaatttgtgagagtgttccttacaaattgagagatatattgtagtgagatccacctaagggtgaagttgttgtat 41481631  T
Q  181 tctcattatcattatagtggaagttttaag 210  Q
    || |||||||||||||||||||||||||||    
T  41481632 tcccattatcattatagtggaagttttaag 41481661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 81 - 210
Target Start/End: Original strand, 36167531 - 36167660
Alignment:
Q  81 ttttcttgcgagagaaatagtgagccaatttgtgagagtgttccttacaaattgagaaatatattgtagtgagatccacctaagggtgaagttgttgtat 180  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  36167531 ttttcttgtgagagaaatagtgagccaatttgtgagagtgttccttacaaattgagagatatattatagtgagatccacctaagggtgaagttgttgtat 36167630  T
Q  181 tctcattatcattatagtggaagttttaag 210  Q
    || |||||||||||||||||||||||||||    
T  36167631 tcccattatcattatagtggaagttttaag 36167660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 94 - 210
Target Start/End: Complemental strand, 18951390 - 18951274
Alignment:
Q  94 gaaatagtgagccaatttgtgagagtgttccttacaaattgagaaatatattgtagtgagatccacctaagggtgaagttgttgtattctcattatcatt 193  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||| ||||||||||||||||||||||||| ||||||||||    
T  18951390 gaaataatgagccaatttgtgagagtgttccttacaaattgagagataaattatagtgagatcaacctaagggtgaagttgttgtattcccattatcatt 18951291  T
Q  194 atagtggaagttttaag 210  Q
    |||||||||||||||||    
T  18951290 atagtggaagttttaag 18951274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 115; Significance: 1e-58; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 81 - 207
Target Start/End: Complemental strand, 54967493 - 54967367
Alignment:
Q  81 ttttcttgcgagagaaatagtgagccaatttgtgagagtgttccttacaaattgagaaatatattgtagtgagatccacctaagggtgaagttgttgtat 180  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  54967493 ttttcttgtgagagaaatagtgagccaatttgtgagagtgttccttacaaattgagagatatattgtagtgagatccacctaagggtgaagttgttgtat 54967394  T
Q  181 tctcattatcattatagtggaagtttt 207  Q
    || ||||||||||||||||||||||||    
T  54967393 tcccattatcattatagtggaagtttt 54967367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 81 - 210
Target Start/End: Complemental strand, 44782807 - 44782678
Alignment:
Q  81 ttttcttgcgagagaaatagtgagccaatttgtgagagtgttccttacaaattgagaaatatattgtagtgagatccacctaagggtgaagttgttgtat 180  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  44782807 ttttcttgtgagagaaatagtgagccaatttgtgagagtgttccttgcaaattgagagatatattgtagtgagatccacctaagggtgaagttgttgtat 44782708  T
Q  181 tctcattatcattatagtggaagttttaag 210  Q
    || |||||||||||||||||||||||||||    
T  44782707 tcccattatcattatagtggaagttttaag 44782678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 81 - 207
Target Start/End: Complemental strand, 54980125 - 54979999
Alignment:
Q  81 ttttcttgcgagagaaatagtgagccaatttgtgagagtgttccttacaaattgagaaatatattgtagtgagatccacctaagggtgaagttgttgtat 180  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  54980125 ttttcttgtgagagaaatagcgagccaatttgtgagagtgttccttacaaattgagagatatattgtagtgagatccacctaagggtgaagttgttgtat 54980026  T
Q  181 tctcattatcattatagtggaagtttt 207  Q
    || ||||||||||||||||||||||||    
T  54980025 tcccattatcattatagtggaagtttt 54979999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 90 - 206
Target Start/End: Original strand, 39298729 - 39298844
Alignment:
Q  90 gagagaaatagtgagccaatttgtgagagtgttccttacaaattgagaaatatattgtagtgagatccacctaagggtgaagttgttgtattctcattat 189  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| | ||||    
T  39298729 gagagaaatagtgagccaatttgtgagagtgt-ccttacaaattgagagatatattgtagttagatccacctaagggtgaagttgttgtattccctttat 39298827  T
Q  190 cattatagtggaagttt 206  Q
    |||||||||||||||||    
T  39298828 cattatagtggaagttt 39298844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 85 - 206
Target Start/End: Original strand, 17645715 - 17645831
Alignment:
Q  85 cttgcgagagaaatagtgagccaatttgtgagagtgttccttacaaattgagaaatatattgtagtgagatccacctaagggtgaagttgttgtattctc 184  Q
    |||| |||| ||||||||||||||||||| ||||||||||||||||||||||| |||  ||||||||||||||||||| ||     ||||||||||| ||    
T  17645715 cttgtgagataaatagtgagccaatttgtaagagtgttccttacaaattgagagatacgttgtagtgagatccacctaggg-----gttgttgtattgtc 17645809  T
Q  185 attatcattatagtggaagttt 206  Q
    ||||||||||||||||||||||    
T  17645810 attatcattatagtggaagttt 17645831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 143 - 206
Target Start/End: Complemental strand, 18556523 - 18556460
Alignment:
Q  143 attgtagtgagatccacctaagggtgaagttgttgtattctcattatcattatagtggaagttt 206  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18556523 attgtaatgagatccacctaagggtgaagttgttgtattctcattgtcattatagtggaagttt 18556460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 81 - 210
Target Start/End: Original strand, 2653 - 2782
Alignment:
Q  81 ttttcttgcgagagaaatagtgagccaatttgtgagagtgttccttacaaattgagaaatatattgtagtgagatccacctaagggtgaagttgttgtat 180  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2653 ttttcttgtgagagaaatagtgagccaatttgtgagagcgttccttacaaattgagagatatattgtagtgagatccacctaagggtgaagttgttgtat 2752  T
Q  181 tctcattatcattatagtggaagttttaag 210  Q
    || |||||||||||||||||||||||||||    
T  2753 tcccattatcattatagtggaagttttaag 2782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 6e-58; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 81 - 210
Target Start/End: Complemental strand, 4835856 - 4835727
Alignment:
Q  81 ttttcttgcgagagaaatagtgagccaatttgtgagagtgttccttacaaattgagaaatatattgtagtgagatccacctaagggtgaagttgttgtat 180  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  4835856 ttttcttgtgagagaaatagtgagccaatttgtgagagtgttccttacaaattgagagatatattgtagtgagatccacctaagggtgaagttgttgcat 4835757  T
Q  181 tctcattatcattatagtggaagttttaag 210  Q
    || |||||||||||||||||||||||||||    
T  4835756 tcccattatcattatagtggaagttttaag 4835727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 81 - 210
Target Start/End: Complemental strand, 25857411 - 25857282
Alignment:
Q  81 ttttcttgcgagagaaatagtgagccaatttgtgagagtgttccttacaaattgagaaatatattgtagtgagatccacctaagggtgaagttgttgtat 180  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||    
T  25857411 ttttcttgtgagagaaatagtgagccaatttgtgagagtgttccttacaaattaagagatatattgtagtgagatccacctaaaggtgaagttgttgtat 25857312  T
Q  181 tctcattatcattatagtggaagttttaag 210  Q
    || |||||||||||||||||||||||||||    
T  25857311 tcccattatcattatagtggaagttttaag 25857282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 81 - 210
Target Start/End: Complemental strand, 4842931 - 4842802
Alignment:
Q  81 ttttcttgcgagagaaatagtgagccaatttgtgagagtgttccttacaaattgagaaatatattgtagtgagatccacctaagggtgaagttgttgtat 180  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  4842931 ttttcttgtgagagaaatattgagccaatttgtgagagtgttccttaaaaattgagagatatattgtagtgagatccacctaagggtgaagttgttgtat 4842832  T
Q  181 tctcattatcattatagtggaagttttaag 210  Q
    ||  ||||||||||||||||||||||||||    
T  4842831 tcctattatcattatagtggaagttttaag 4842802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 81 - 210
Target Start/End: Complemental strand, 24379561 - 24379432
Alignment:
Q  81 ttttcttgcgagagaaatagtgagccaatttgtgagagtgttccttacaaattgagaaatatattgtagtgagatccacctaagggtgaagttgttgtat 180  Q
    |||||||| || ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  24379561 ttttcttgtgaaagaaatagtgagccaatttatgagagtgttccttacaaattgagagatatattgtagggagatccacctaagggtgaagttgttgtat 24379462  T
Q  181 tctcattatcattatagtggaagttttaag 210  Q
    ||  ||||||||||||||||||||||||||    
T  24379461 tcctattatcattatagtggaagttttaag 24379432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 92 - 210
Target Start/End: Complemental strand, 13465228 - 13465110
Alignment:
Q  92 gagaaatagtgagccaatttgtgagagtgttccttacaaattgagaaatatattgtagtgagatccacctaagggtgaagttgttgtattctcattatca 191  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||| ||||||||||| ||||||||    
T  13465228 gagaaatagtgaaccaatttgtaagagtgttccttacaaattgagagatacattgtagtgagatccacctgagggtgaacttgttgtattcccattatca 13465129  T
Q  192 ttatagtggaagttttaag 210  Q
    |||||||||| ||||||||    
T  13465128 ttatagtggatgttttaag 13465110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 81 - 210
Target Start/End: Original strand, 4603594 - 4603721
Alignment:
Q  81 ttttcttgcgagagaaatagtgagccaatttgtgagagtgttccttacaaattgagaaatatattgtagtgagatccacctaagggtgaagttgttgtat 180  Q
    |||||||| ||||||||||| |||||||||||| ||  ||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||    
T  4603594 ttttcttgtgagagaaatagagagccaatttgtaag--tgttccttacaaattgaaagatatattgtagtgagatccacctaagggtaaagttgttgtat 4603691  T
Q  181 tctcattatcattatagtggaagttttaag 210  Q
    |  |||||||||||||||||||| ||||||    
T  4603692 ttccattatcattatagtggaaggtttaag 4603721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 113 - 206
Target Start/End: Original strand, 17845803 - 17845896
Alignment:
Q  113 tgagagtgttccttacaaattgagaaatatattgtagtgagatccacctaagggtgaagttgttgtattctcattatcattatagtggaagttt 206  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||    
T  17845803 tgagagtgttccttacaaattgagagatatattgtagtgagattcacctaagggtgaagttgttgtatttccattatcattatagtggaagttt 17845896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 90 - 206
Target Start/End: Complemental strand, 27341203 - 27341089
Alignment:
Q  90 gagagaaatagtgagccaatttgtgagagtgttccttacaaattgagaaatatattgtagtgagatccacctaagggtgaagttgttgtattctcattat 189  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||| ||||  | |||||| |||||||  ||||||    
T  27341203 gagagaaatagtgagccaacctgtgagagtgttccttacaaattgagagatatattgtagtgagatccatctaa--gagaagttattgtatttccattat 27341106  T
Q  190 cattatagtggaagttt 206  Q
    |||| |||| |||||||    
T  27341105 cattgtagtagaagttt 27341089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 85 - 165
Target Start/End: Complemental strand, 38994317 - 38994237
Alignment:
Q  85 cttgcgagagaaatagtgagccaatttgtgagagtgttccttacaaattgagaaatatattgtagtgagatccacctaagg 165  Q
    |||| |||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  38994317 cttgtgagagaaataatgagccaatttgtgatagtgttccttacaaattgagagatatattgtagtgagatccacctaagg 38994237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 110; Significance: 1e-55; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 81 - 210
Target Start/End: Complemental strand, 42683114 - 42682985
Alignment:
Q  81 ttttcttgcgagagaaatagtgagccaatttgtgagagtgttccttacaaattgagaaatatattgtagtgagatccacctaagggtgaagttgttgtat 180  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  42683114 ttttcttgtgagagaaatagtgagccaatttgtaagagtgttccttacaaattgagagatatattgtagtgagatgcacctaagggtgaagttgttgtat 42683015  T
Q  181 tctcattatcattatagtggaagttttaag 210  Q
    || |||||||||||||||||||||||||||    
T  42683014 tcccattatcattatagtggaagttttaag 42682985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 81 - 207
Target Start/End: Complemental strand, 9757496 - 9757370
Alignment:
Q  81 ttttcttgcgagagaaatagtgagccaatttgtgagagtgttccttacaaattgagaaatatattgtagtgagatccacctaagggtgaagttgttgtat 180  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  9757496 ttttcttttgagagaaatagtgagccaatttgtgagagtgttccttacaaattgagagatatattatagtgagatccacctaagggtgaagttgttgtat 9757397  T
Q  181 tctcattatcattatagtggaagtttt 207  Q
    || ||||||||||||||||||||||||    
T  9757396 tcccattatcattatagtggaagtttt 9757370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 90 - 206
Target Start/End: Complemental strand, 37287155 - 37287038
Alignment:
Q  90 gagagaaatagtgagccaatttgtgagagtgttccttacaaattgagaaatatattgtagtgagatccacctaagggtg-aagttgttgtattctcatta 188  Q
    |||||||| |||||||| |||||||  | ||||||||||||||||||| ||||||||||||||| |||| ||||||||| ||||||||||||||| ||||    
T  37287155 gagagaaacagtgagccgatttgtgttaatgttccttacaaattgagagatatattgtagtgagctccatctaagggtgaaagttgttgtattcttatta 37287056  T
Q  189 tcattatagtggaagttt 206  Q
    | ||||||||||||||||    
T  37287055 ttattatagtggaagttt 37287038  T

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Target: scaffold0003 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 81 - 210
Target Start/End: Complemental strand, 342498 - 342369
Alignment:
Q  81 ttttcttgcgagagaaatagtgagccaatttgtgagagtgttccttacaaattgagaaatatattgtagtgagatccacctaagggtgaagttgttgtat 180  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||| |||||||||    
T  342498 ttttcttgtgagagaaatagtgagccaatttgtgagagtgttccttacaaattgagagatatattgtagtcagatacacctaagggtgaaattgttgtat 342399  T
Q  181 tctcattatcattatagtggaagttttaag 210  Q
    || |||||||||||||||||||||||||||    
T  342398 tcccattatcattatagtggaagttttaag 342369  T

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Target: scaffold0045 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 95 - 206
Target Start/End: Complemental strand, 26754 - 26643
Alignment:
Q  95 aaatagtgagccaatttgtgagagtgttccttacaaattgagaaatatattgtagtgagatccacctaagggtgaagttgttgtattctcattatcatta 194  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||| ||||||||||| |||||||||    
T  26754 aaatagtgagccaatttgtgagagtgttccttacaaattgagagataaattgtagtgagatccacctaagggtggagtagttgtattctcgttatcatta 26655  T
Q  195 tagtggaagttt 206  Q
     |||||||||||    
T  26654 gagtggaagttt 26643  T

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Target: chr2 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 81 - 206
Target Start/End: Original strand, 37037848 - 37037973
Alignment:
Q  81 ttttcttgcgagagaaatagtgagccaatttgtgagagtgttccttacaaattgagaaatatattgtagtgagatccacctaagggtgaagttgttgtat 180  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||   | |||||| ||||||||||||||| |||||||||||||||    
T  37037848 ttttcttgtgagagaaatagtgagccaatttgtgagagtgtttcttataaattgagagtcagattgtaatgagatccacctaagagtgaagttgttgtat 37037947  T
Q  181 tctcattatcattatagtggaagttt 206  Q
    |||||||||| |||||||| ||||||    
T  37037948 tctcattatcgttatagtgaaagttt 37037973  T

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Target: chr5 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 81 - 210
Target Start/End: Original strand, 16698413 - 16698539
Alignment:
Q  81 ttttcttgcgagagaaatagtgagccaatttgtgagagtgttccttacaaattgagaaatatattgtagtgagatccacctaagggtgaagttgttgtat 180  Q
    |||||||| | ||||||||| || |||||| ||||||||||| |||||||||||||| ||| ||||||||||||||||| ||||||||||   |||||||    
T  16698413 ttttcttgtgggagaaatagggacccaattcgtgagagtgtttcttacaaattgagagatacattgtagtgagatccacataagggtgaa---gttgtat 16698509  T
Q  181 tctcattatcattatagtggaagttttaag 210  Q
    || |||||||||||||||||||||||||||    
T  16698510 tcccattatcattatagtggaagttttaag 16698539  T

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Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 148 - 210
Target Start/End: Complemental strand, 22764029 - 22763967
Alignment:
Q  148 agtgagatccacctaagggtgaagttgttgtattctcattatcattatagtggaagttttaag 210  Q
    |||||||| |||||||| ||||||||||||||||| ||||||||||||||   ||||||||||    
T  22764029 agtgagattcacctaagagtgaagttgttgtattcccattatcattatagcataagttttaag 22763967  T

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Target: chr1 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 90 - 206
Target Start/End: Original strand, 27642044 - 27642160
Alignment:
Q  90 gagagaaatagtgagccaatttgtgagagtgttccttacaaattgagaaatatattgtagtgagatccacctaagggtgaagttgttgtattctcattat 189  Q
    |||||||||||  || ||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||| | |||||||||| ||||| ||||||    
T  27642044 gagagaaataggaagtcaatttgtgagagtgttccttacaaatagagagatatattgtagtgagatccacttaaagatgaagttgttttattcccattat 27642143  T
Q  190 cattatagtggaagttt 206  Q
     ||||||||||||||||    
T  27642144 tattatagtggaagttt 27642160  T

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Target: chr6 (Bit Score: 58; Significance: 1e-24; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 145 - 210
Target Start/End: Original strand, 22981494 - 22981559
Alignment:
Q  145 tgtagtgagatccacctaagggtgaagttgttgtattctcattatcattatagtggaagttttaag 210  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22981494 tgtagtgaaatccacctaagggtgaagttgttgtattcccattatcattatagtggaagttttaag 22981559  T

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Target: chr6; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 145 - 210
Target Start/End: Complemental strand, 23806914 - 23806849
Alignment:
Q  145 tgtagtgagatccacctaagggtgaagttgttgtattctcattatcattatagtggaagttttaag 210  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  23806914 tgtagtgaaatccacctaagggtgaagttgttgtattcccattatcattatagtggaagttttaag 23806849  T

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