View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7294_low_10 (Length: 407)
Name: NF7294_low_10
Description: NF7294
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7294_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 380; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 380; E-Value: 0
Query Start/End: Original strand, 1 - 392
Target Start/End: Original strand, 7133031 - 7133422
Alignment:
| Q |
1 |
tcaatgttcctgcagccttgctgataactgtagcaggaagctgttgaggatctccaacaagaacacatcgtgctgccccaagagaaaggggaggaagaac |
100 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7133031 |
tcaaggttcctgcagccttgctgataactgtagcaggaagctgttgaggatctccaacaagaacacatcgtgctgccccaagagaaaggggaggaagaac |
7133130 |
T |
|
| Q |
101 |
tcccacttcactggcttgggctgcctcgtcaattactaccatatcaaatccatgggaaagacgagaaaacaacttgcggccactgctagaaacagtagtg |
200 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7133131 |
tcccacctcactggcttgggctgcctcgtcaattactaccatatcaaatccatgggaaagacgagaaaacaacttgcggccactgctagaaacagtagtg |
7133230 |
T |
|
| Q |
201 |
aaaactatttcagcttcattggcaaaactggcctccagactagcacgggcctcttccaaattgaaaccactgccaggtcgaaacctaccttccaaaacag |
300 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7133231 |
aaaactatttcagcttcattggcaaaactggcctccagactagcacgggcctcttccaaattgaaaccactgccaggtcgaaacctaccttccaaaacag |
7133330 |
T |
|
| Q |
301 |
caaggcgggacatctcgaccagaaccttatccctgccttcgactacagaggcaaggttctgtagcaaaacatcccgattctggtcacgggcc |
392 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
7133331 |
caaggcgggacatctcgaccagaaccttatccctgccttcgactacagaggcaaggttctgtagcaaaacatcccgattctgatcacgggcc |
7133422 |
T |
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