View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7295_high_4 (Length: 295)
Name: NF7295_high_4
Description: NF7295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7295_high_4 |
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Alignment Details
Target: chr5 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 75 - 289
Target Start/End: Complemental strand, 526675 - 526461
Alignment:
| Q |
75 |
gttcagcttcaagtttaatcatcgtagaataatgttctctctgagtttgtttttatgttaagaaaaagttagttatcacctgtttggagatgactagtgc |
174 |
Q |
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| T |
526675 |
gttcatcttcaagtttaatcatcgtagaataatgttctctctgagtttgtttttatgttaagaaaaagttagttatcacctgtttggagatgactagtgc |
526576 |
T |
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| Q |
175 |
aataaatcaactgcttttttcttactatcacagctttggaaagctaaaaagagcatcatattcacagagtcacagaagaaagactgaacaaattaacaaa |
274 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
526575 |
aataaatcaaccgcttttttcttactatcacagctttggaaagctaaaaagagcatcatattcacagagtcacagaagaaagactgaacaaattaacata |
526476 |
T |
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| Q |
275 |
atgataggactcatt |
289 |
Q |
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||||||||||||||| |
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| T |
526475 |
atgataggactcatt |
526461 |
T |
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