View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7295_low_1 (Length: 623)
Name: NF7295_low_1
Description: NF7295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7295_low_1 |
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Alignment Details
Target: chr4 (Bit Score: 534; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 534; E-Value: 0
Query Start/End: Original strand, 31 - 617
Target Start/End: Complemental strand, 50214944 - 50214358
Alignment:
| Q |
31 |
gagtaaataatagaagtgtttcatttaacagatttcttgcatttactacatgtacaccttactggatctaattctaatgttatacttatacnnnnnnngt |
130 |
Q |
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| T |
50214944 |
gagtaaagaatagaagtgtttcatttaacagatttcttgcatttactacatgtacaccttactggatctaattctaatgttatacttatactttttttgt |
50214845 |
T |
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| Q |
131 |
tgcttatatactatttccactcctaatgccattttcattcagcccaatttaattagcatatatgttcctattatccgtgtgatttgaggaggttctgtct |
230 |
Q |
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| T |
50214844 |
tgcttatatactatttccactcctaatgccattttcattcagcccaatttaattagcatatatgttcctattatccgtgtgatttgaggaggttctgtct |
50214745 |
T |
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| Q |
231 |
tgaacattggtgatatatttcaaaagaaaaatcatgctgctgtgttgaaggaggaaatatgataactgttctctggacttgcagatctctgaatgtaccc |
330 |
Q |
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| T |
50214744 |
tgaacatcggtgatatatttcaaaagaaaaatcatgctgctgtgttgaaggaggaaatatgataatttttctctggacttgcagatctctgaatgtaccc |
50214645 |
T |
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| Q |
331 |
ctaccaaataaggagaccttgtcaagacactcatttttaggaccaaatggtcttcggggacaatggcttggacctagtgcagaaataaaggtaaaattga |
430 |
Q |
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| T |
50214644 |
ctaccaaataaggagaccttgtcaagacactcatttttaggaccaaatggtcttcggggacaatggcttggacctagtgcagaaataaaggtaaaattga |
50214545 |
T |
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| Q |
431 |
agtgcgggtttgttatattaagtgaccatgaataatatatatctctgatataatacttgttgcaacaatggagttttagaagagagaattgaaattgaat |
530 |
Q |
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| T |
50214544 |
agtgcgggtttgttatattaagtgaccatgaataatatatatctctgatataatacttgttgcaacaatggagttttagaagagagaattgaaattgaat |
50214445 |
T |
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| Q |
531 |
gctctgaaattgatatacgatgtgtagcaaagcatatagaactagcccttatgtaaattgttactagacttgatgtccatctcattg |
617 |
Q |
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| T |
50214444 |
gctctgaaattgatatacgatgtgtagcaaagcatattgaactagcccttatgtaaattgttactagacttgctgtctatctaattg |
50214358 |
T |
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