View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7296_high_4 (Length: 378)
Name: NF7296_high_4
Description: NF7296
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7296_high_4 |
 |  |
|
| [»] chr4 (1 HSPs) |
 |  |
|
Alignment Details
Target: chr5 (Bit Score: 194; Significance: 1e-105; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 49 - 364
Target Start/End: Original strand, 42125375 - 42125687
Alignment:
| Q |
49 |
agagagatgaagtgattgtaatttggaaatgtgtgagatttgaattggaatttcacctttaaagaaactatttgacaagtcaagatgtgtaagacttgaa |
148 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| | |
|
|
| T |
42125375 |
agagagatgaagtgattgtaatttggaaaggtgtgagatttgaattggaatttcacctttaaagaaactacgagacaagtcaagatgtgcaagactcata |
42125474 |
T |
 |
| Q |
149 |
aatccaccaaacttggaatcaaaatgggagtaagagaaattattgttagaaaggttgagtgtttgaagatgaacaagatggaaaagagtactgttaggat |
248 |
Q |
| |
|
|| ||||||||||| |||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
42125475 |
aacccaccaaacttagaatgaaaatgagagtaagagaaatcattgttagaaaggttgagtgtttgaagatgaacaagattgaaaagggtactgttaggat |
42125574 |
T |
 |
| Q |
249 |
ggaatataccttgaaggccttcacagccaaggttgagtccaatcacgtgaccagagactgtgtcacacttgacaccatgccatgatgagcagcaatcagt |
348 |
Q |
| |
|
| | | ||||||||||||||||||||||||| ||||| ||||||||||||| || || || |||||| ||||||||| || |||||||||||||||| |
|
|
| T |
42125575 |
gtagtttaccttgaaggccttcacagccaagattgaggccaatcacgtgacgagtgatggtatcacacgtgacaccattcc---atgagcagcaatcagt |
42125671 |
T |
 |
| Q |
349 |
cccatttttccatgtt |
364 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
42125672 |
cccatttttccatgtt |
42125687 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 39 - 364
Target Start/End: Complemental strand, 41712024 - 41711702
Alignment:
| Q |
39 |
cataattcctagagagatgaagtgattgtaatttggaaatgtgtgagatttgaattggaatttcacctttaaagaaactatttgacaagtcaagatgtgt |
138 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||| |||||| |||| ||||||||||| |
|
|
| T |
41712024 |
cataattctgagagagatgaagtgattgtaatttggagaggtgtgagatttgaattggaatttcaccttcaaagtaactataagacatgtcaagatgtgc |
41711925 |
T |
 |
| Q |
139 |
aagacttgaaaatccaccaaacttggaatcaaaatgggagtaagagaaattattgttagaaaggttgagtgtttgaagatgaacaagatggaaaagagta |
238 |
Q |
| |
|
|||||| |||| | ||||||||| |||| |||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
41711924 |
aagactcaaaaaccgaccaaacttagaatgaaaatgggagtaagagaaatcattgtaagaaaggttgagtgtttggagatgaacaagatggaaaagagta |
41711825 |
T |
 |
| Q |
239 |
ctgttaggatggaatataccttgaaggccttcacagccaaggttgagtccaatcacgtgaccagagactgtgtcacacttgacaccatgccatgatgagc |
338 |
Q |
| |
|
| |||||||||||||||||||||||||| ||||||||||||||||| |||| |||| ||||| |||| |||||||| ||||||| ||| |||||| |
|
|
| T |
41711824 |
ttattaggatggaatataccttgaaggccatcacagccaaggttgaggccaaccacgcgaccatagacggtgtcacatgtgacaccgggcc---atgagc |
41711728 |
T |
 |
| Q |
339 |
agcaatcagtcccatttttccatgtt |
364 |
Q |
| |
|
| ||||||||| |||||||||||||| |
|
|
| T |
41711727 |
aacaatcagtctcatttttccatgtt |
41711702 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 49 - 364
Target Start/End: Original strand, 42130600 - 42130912
Alignment:
| Q |
49 |
agagagatgaagtgattgtaatttggaaatgtgtgagatttgaattggaatttcacctttaaagaaactatttgacaagtcaagatgtgtaagacttgaa |
148 |
Q |
| |
|
||||||||||||||||||||||||||| | ||| ||||||||| ||||||||||||||| ||| ||||| ||||||||||||||||||||||| | |
|
|
| T |
42130600 |
agagagatgaagtgattgtaatttggataggtgagagatttgagttggaatttcaccttctaagttactatcagacaagtcaagatgtgtaagactctga |
42130699 |
T |
 |
| Q |
149 |
aatccaccaaacttggaatcaaaatgggagtaagagaaattattgttagaaaggttgagtgtttgaagatgaacaagatggaaaagagtactgttaggat |
248 |
Q |
| |
|
||||||| |||||| ||| |||||| |||| | |||||| ||||| |||||||||||||||||| |||||||||||||| ||||| ||||| ||||||| |
|
|
| T |
42130700 |
aatccacaaaacttataatgaaaatgagagtcaaagaaatcattgtaagaaaggttgagtgtttggagatgaacaagatgaaaaagggtactattaggat |
42130799 |
T |
 |
| Q |
249 |
ggaatataccttgaaggccttcacagccaaggttgagtccaatcacgtgaccagagactgtgtcacacttgacaccatgccatgatgagcagcaatcagt |
348 |
Q |
| |
|
|||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||| || |||||||||||||||| |
|
|
| T |
42130800 |
tgaatgtacctgtaaggccttcacagccaaggttgaggtcaatcacgtgaccagagactgtgtcacacgtgacgccattcc---atgagcagcaatcagt |
42130896 |
T |
 |
| Q |
349 |
cccatttttccatgtt |
364 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
42130897 |
cccatttttccatgtt |
42130912 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 63 - 364
Target Start/End: Original strand, 42118787 - 42119089
Alignment:
| Q |
63 |
attgtaatttggaaatgtgtgagatttgaattggaatttcacctttaaagaaa-ctatttgacaagtcaagatgtgtaagacttgaaaatccaccaaact |
161 |
Q |
| |
|
||||||||||||| | ||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||| |||||||||| |
|
|
| T |
42118787 |
attgtaatttggataagtgtgagatttgagttggaatttcacctttaaagaaaactatgagacaagtcaagatgtgtaagactcaaaaaaccaccaaact |
42118886 |
T |
 |
| Q |
162 |
tggaatcaaaatgggagtaagagaaattattgttagaaaggttgagtgtttgaagatgaacaagatggaaaagagtactgttaggatggaatataccttg |
261 |
Q |
| |
|
| |||| |||| | || |||||||||||| | |||||| |||||||| |||||||||||||||||||| ||| |||||||||| ||| |||| |
|
|
| T |
42118887 |
tagaatgaaaacgagaagcggagaaattattggatgcaaggtttagtgtttggagatgaacaagatggaaaagggtattgttaggatgtaatttaccagt |
42118986 |
T |
 |
| Q |
262 |
aaggccttcacagccaaggttgagtccaatcacgtgaccagagactgtgtcacacttgacaccatgccatgatgagcagcaatcagtcccatttttccat |
361 |
Q |
| |
|
||||| || | ||||||||||||| ||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42118987 |
aaggcgttaaaagccaaggttgagaccaatcacgtgaccagagactctgacacacgcgacaccatgccatgatgagcagcaatcagtcccatttttccat |
42119086 |
T |
 |
| Q |
362 |
gtt |
364 |
Q |
| |
|
||| |
|
|
| T |
42119087 |
gtt |
42119089 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 39 - 364
Target Start/End: Complemental strand, 34239095 - 34238773
Alignment:
| Q |
39 |
cataattcctagagagatgaagtgattgtaatttggaaatgtgtgagatttgaattggaatttcacctttaaagaaactatttgacaagtcaagatgtgt |
138 |
Q |
| |
|
|||||| || ||| ||||||||||||||||||||||||| || |||||||||| ||||||||||| || | |||| ||||||||||||||||| |
|
|
| T |
34239095 |
cataatgcccagaaagatgaagtgattgtaatttggaaaggtatgagatttgagaaggaatttcaccgccaacatgagtattagacaagtcaagatgtgt |
34238996 |
T |
 |
| Q |
139 |
aagacttgaaaatccaccaaacttggaatcaaaatgggagtaagagaaattattgttagaaaggttgagtgtttgaagatgaacaagatggaaaagagta |
238 |
Q |
| |
|
|||||| | ||| | |||||||| |||||||||| ||| | ||||| |||||||||||||||||||||||| |||||||||| || |||||| ||| |
|
|
| T |
34238995 |
aagactcgtaaacctgccaaacttagaatcaaaataggaaccatagaaaccattgttagaaaggttgagtgtttggagatgaacaatattgaaaagggta |
34238896 |
T |
 |
| Q |
239 |
ctgttaggatggaatataccttgaaggccttcacagccaaggttgagtccaatcacgtgaccagagactgtgtcacacttgacaccatgccatgatgagc |
338 |
Q |
| |
|
|| |||||||||| ||||||||||| ||||||||| |||||||| || ||||| ||||||||||| || ||||||||| |||||||||||| |||||| |
|
|
| T |
34238895 |
ctattaggatggagtataccttgaaagccttcacaaccaaggttaaggccaatgacgtgaccagatacggtgtcacacgtgacaccatgcc---atgagc |
34238799 |
T |
 |
| Q |
339 |
agcaatcagtcccatttttccatgtt |
364 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
34238798 |
agcaatcagtcccatttttccatgtt |
34238773 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 43 - 364
Target Start/End: Complemental strand, 34231048 - 34230718
Alignment:
| Q |
43 |
attcctagagagatgaagtgattgtaatttggaaatgtgtgagatttgaattggaatttcacctttaaagaaactatttgacaagtcaagatgtgtaaga |
142 |
Q |
| |
|
||||| ||| ||||||||||||||||||||||||| || ||||||||| ||||||||| ||| |||||||| | |||||||| |||||||||||| |
|
|
| T |
34231048 |
attcccagaaagatgaagtgattgtaatttggaaaggtccgagatttgagaaggaatttcatcttgaaagaaacaagaagacaagtcgagatgtgtaaga |
34230949 |
T |
 |
| Q |
143 |
cttgaaaatccaccaaacttggaatcaaaatgggag------------taagagaaattattgttagaaaggttgagtgtttgaagatgaacaagatgga |
230 |
Q |
| |
|
|| ||| || |||||||| |||| |||||||||| | |||||||| |||||| ||||||||||| ||||||| ||| ||||||||| |
|
|
| T |
34230948 |
ctcataaacccgccaaacttagaatgaaaatgggagccagagaaatcgttagagaaataattgttcgaaaggttgagcatttgaaggtgagcaagatgga |
34230849 |
T |
 |
| Q |
231 |
aaagagtactgttaggatggaatataccttgaaggccttcacagccaaggttgagtccaatcacgtgaccagagactgtgtcacacttgacaccatgcca |
330 |
Q |
| |
|
|||| ||||| |||||||||| ||||||||||| |||||||||||||||||| || ||||| ||||||||||| || ||||||||| |||||||||||| |
|
|
| T |
34230848 |
aaagggtactattaggatggagtataccttgaaagccttcacagccaaggttaaggccaatgacgtgaccagatacggtgtcacacgtgacaccatgcc- |
34230750 |
T |
 |
| Q |
331 |
tgatgagcagcaatcagtcccatttttccatgtt |
364 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
34230749 |
--atgagcagcaatcagtcccatttttccatgtt |
34230718 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 122 - 333
Target Start/End: Complemental strand, 41570171 - 41569960
Alignment:
| Q |
122 |
gacaagtcaagatgtgtaagacttgaaaatccaccaaacttggaatcaaaatgggagtaagagaaattattgttagaaaggttgagtgtttgaagatgaa |
221 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||| |||| |||| ||||| |||||| ||||| |||||||||||||| ||| |||||| |
|
|
| T |
41570171 |
gacaagtcaagatgtgtaagactcttaaatccaccaaactgagaatgcaaattggagttgaagaaatcattgtgagaaaggttgagtgattggagatgag |
41570072 |
T |
 |
| Q |
222 |
caagatggaaaagagtactgttaggatggaatataccttgaaggccttcacagccaaggttgagtccaatcacgtgaccagagactgtgtcacacttgac |
321 |
Q |
| |
|
||||||| |||||||| ||||||||| | | |||||||||||| |||||||||||||| ||| ||||||||| |||||||||| | ||| ||| |||| |
|
|
| T |
41570071 |
caagatgaaaaagagtgttgttaggataaattttaccttgaaggcattcacagccaaggtcgagaccaatcacgcgaccagagacagcgtcgcacgtgac |
41569972 |
T |
 |
| Q |
322 |
accatgccatga |
333 |
Q |
| |
|
|||||||||||| |
|
|
| T |
41569971 |
accatgccatga |
41569960 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 199 - 315
Target Start/End: Original strand, 41433422 - 41433538
Alignment:
| Q |
199 |
aaggttgagtgtttgaagatgaacaagatggaaaagagtactgttaggatggaatataccttgaaggccttcacagccaaggttgagtccaatcacgtga |
298 |
Q |
| |
|
||||||||||||||| |||||| |||||| ||||| |||||||| ||||| | |||||||||||||| | |||| |||| | ||||| |||||| |
|
|
| T |
41433422 |
aaggttgagtgtttggagatgagaaagatgaaaaagtgtactgttgggatgaatcataccttgaaggccattgcagctgaggtctaagccaattacgtga |
41433521 |
T |
 |
| Q |
299 |
ccagagactgtgtcaca |
315 |
Q |
| |
|
||||| ||||||||||| |
|
|
| T |
41433522 |
ccagaaactgtgtcaca |
41433538 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 364
Target Start/End: Original strand, 41446146 - 41446308
Alignment:
| Q |
199 |
aaggttgagtgtttgaagatgaacaagatggaaaagagtactgttaggatggaatataccttgaaggccttcacagccaaggttgagtccaatcacgtga |
298 |
Q |
| |
|
||||||||||||||| |||||| |||||| ||||| |||||||| ||||| | |||||||||||| | | |||| |||| | ||||| |||||| |
|
|
| T |
41446146 |
aaggttgagtgtttggagatgagaaagatgaaaaagtgtactgttgggatgaataataccttgaaggtcattgcagctgaggtctaagccaattacgtga |
41446245 |
T |
 |
| Q |
299 |
ccagagactgtgtcacacttgacaccatgccatgatgagcagcaatcagtcccatttttccatgtt |
364 |
Q |
| |
|
||||| | ||||||||| |||||||| ||| ||||||| ||||| || ||||||| ||||||| |
|
|
| T |
41446246 |
ccagaaattgtgtcacaggtgacaccaagcc---atgagcaacaatctgtaccattttgccatgtt |
41446308 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 161; Significance: 9e-86; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 50 - 364
Target Start/End: Original strand, 12250197 - 12250508
Alignment:
| Q |
50 |
gagagatgaagtgattgtaatttggaaatgtgtgagatttgaattggaatttcacctttaaagaaactatttgacaagtcaagatgtgtaagacttgaaa |
149 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||| | | | |
|
|
| T |
12250197 |
gagagatgaagtgattctaatttggaaaggtgtgagatttgagttggaacttcacctttaaagaaactattagacaagtcaagatgtgtaagattaaaga |
12250296 |
T |
 |
| Q |
150 |
atccaccaaacttggaatcaaaatgggagtaagagaaattattgttagaaaggttgagtgtttgaagatgaacaagatggaaaagagtactgttaggatg |
249 |
Q |
| |
|
||||||||||||| |||| ||||||||||| ||||||| |||| |||||||||||||||||| |||||| |||||| |||||| ||||| ||||| || |
|
|
| T |
12250297 |
atccaccaaacttagaatgaaaatgggagtttgagaaatcattggaagaaaggttgagtgtttggagatgagcaagatcgaaaagggtactattaggttg |
12250396 |
T |
 |
| Q |
250 |
gaatataccttgaaggccttcacagccaaggttgagtccaatcacgtgaccagagactgtgtcacacttgacaccatgccatgatgagcagcaatcagtc |
349 |
Q |
| |
|
|||||||| | |||||||||| |||||||| ||| |||||||| |||||| ||| ||||||||| |||||||||||| ||||||||||||||||| |
|
|
| T |
12250397 |
taatataccatcaaggccttcatcgccaaggtcgaggccaatcacatgaccatagattgtgtcacatgtgacaccatgcc---atgagcagcaatcagtc |
12250493 |
T |
 |
| Q |
350 |
ccatttttccatgtt |
364 |
Q |
| |
|
||||||| ||||||| |
|
|
| T |
12250494 |
ccattttgccatgtt |
12250508 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 164 - 209
Target Start/End: Complemental strand, 32680953 - 32680908
Alignment:
| Q |
164 |
gaatcaaaatgggagtaagagaaattattgttagaaaggttgagtg |
209 |
Q |
| |
|
|||| |||||||||||||||||||| |||||||||||||| ||||| |
|
|
| T |
32680953 |
gaatgaaaatgggagtaagagaaatgattgttagaaaggtcgagtg |
32680908 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 158; Significance: 5e-84; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 53 - 364
Target Start/End: Complemental strand, 25521246 - 25520938
Alignment:
| Q |
53 |
agatgaagtgattgtaatttggaaatgtgtgagatttgaattggaatttcacctttaaagaaactatttgacaagtcaagatgtgtaagacttgaaaatc |
152 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||| ||||||| ||||||||||||||| ||| | |
|
|
| T |
25521246 |
agatgaagtgattgtaatttggaaaggtgtgagatttgagttggaattttacctttaaagaaactaccagacaagtaaagatgtgtaagactctgaaacc |
25521147 |
T |
 |
| Q |
153 |
caccaaacttggaatcaaaatgggagtaagagaaattattgttagaaaggttgagtgtttgaagatgaacaagatggaaaagagtactgttaggatggaa |
252 |
Q |
| |
|
|||||||||| | || |||||||||| || ||||| ||||| ||||||||||||| |||||| |||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
25521146 |
caccaaacttagcatgaaaatgggagccagtgaaatcattgtaagaaaggttgagtttttgaatatgagcaagatggaaaagagtactattaggatggaa |
25521047 |
T |
 |
| Q |
253 |
tataccttgaaggccttcacagccaaggttgagtccaatcacgtgaccagagactgtgtcacacttgacaccatgccatgatgagcagcaatcagtccca |
352 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||||||| ||||| | ||||| || |||||||||||| |||||||||||||||||||| |
|
|
| T |
25521046 |
tataccttggaggccttcacagccaaggttgaggccaatcacgcgaccaaaagtggtgtcgcatgtgacaccatgcc---atgagcagcaatcagtccca |
25520950 |
T |
 |
| Q |
353 |
tttttccatgtt |
364 |
Q |
| |
|
| |||||||||| |
|
|
| T |
25520949 |
tatttccatgtt |
25520938 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 154; Significance: 1e-81; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 49 - 364
Target Start/End: Original strand, 8524830 - 8525142
Alignment:
| Q |
49 |
agagagatgaagtgattgtaatttggaaatgtgtgagatttgaattggaatttcacctttaaagaaactatttgacaagtcaagatgtgtaagacttgaa |
148 |
Q |
| |
|
||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||| | |||||| ||||||||||||||||| ||||| || |
|
|
| T |
8524830 |
agagagatgaagtgattgtaatttgcaaaggtgtgagatttgagttggaatttcacctttaaggtaactatgagacaagtcaagatgtgtgagactcaaa |
8524929 |
T |
 |
| Q |
149 |
aatccaccaaacttggaatcaaaatgggagtaagagaaattattgttagaaaggttgagtgtttgaagatgaacaagatggaaaagagtactgttaggat |
248 |
Q |
| |
|
|| ||||||||||| |||| ||||| ||| |||||||| |||||||| |||||||||| |||||| || | ||||||||||||| ||||||||||||| |
|
|
| T |
8524930 |
aacccaccaaactttgaatgaaaataagagccagagaaatcattgttagcaaggttgagtttttgaatataagcaagatggaaaagggtactgttaggat |
8525029 |
T |
 |
| Q |
249 |
ggaatataccttgaaggccttcacagccaaggttgagtccaatcacgtgaccagagactgtgtcacacttgacaccatgccatgatgagcagcaatcagt |
348 |
Q |
| |
|
|| ||| |||||||| |||||||||||||||||||| ||||||||||||||| || ||||||||| ||||||||| || |||||||||||||| | |
|
|
| T |
8525030 |
tgagtatgccttgaagaccttcacagccaaggttgaggccaatcacgtgaccactgatggtgtcacacgtgacaccatccc---atgagcagcaatcaat |
8525126 |
T |
 |
| Q |
349 |
cccatttttccatgtt |
364 |
Q |
| |
|
| |||||||||||||| |
|
|
| T |
8525127 |
ctcatttttccatgtt |
8525142 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 134; Significance: 1e-69; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 43 - 378
Target Start/End: Original strand, 11120143 - 11120475
Alignment:
| Q |
43 |
attcctagagagatgaagtgattgtaatttggaaatgtgtgagatttgaattggaatttcacctttaaagaaactatttgacaagtcaagatgtgtaaga |
142 |
Q |
| |
|
||||| |||||||| ||| |||||||||||||||| | |||||||||| ||||||||||||| | || | ||||| ||||||| ||||||||||||| |
|
|
| T |
11120143 |
attcccagagagataaagggattgtaatttggaaagatatgagatttgagttggaatttcaccataaatgttactataagacaagtaaagatgtgtaaga |
11120242 |
T |
 |
| Q |
143 |
cttgaaaatccaccaaacttggaatcaaaatgggagtaagagaaattattgttagaaaggttgagtgtttgaagatgaacaagatggaaaagagtactgt |
242 |
Q |
| |
|
|| ||| ||||||||||| |||| |||| | ||| ||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||| | |
|
|
| T |
11120243 |
ctctgaaacccaccaaacttagaatgaaaacgagagccggagaaattattgtatacaaggttgagtgtttggagatgaacaagatggaaaagggtactat |
11120342 |
T |
 |
| Q |
243 |
taggatggaatataccttgaaggccttcacagccaaggttgagtccaatcacgtgaccagagactgtgtcacacttgacaccatgccatgatgagcagca |
342 |
Q |
| |
|
| ||||| ||||| |||||||| |||||||||||||| ||||| ||||||||| ||||||||| ||||| ||| ||||||||| || |||||||||| |
|
|
| T |
11120343 |
tcggatgtaatatgccttgaagaccttcacagccaagattgaggccaatcacgcgaccagagatggtgtcgcacgtgacaccattcc---atgagcagca |
11120439 |
T |
 |
| Q |
343 |
atcagtcccatttttccatgtttgtgttgaaggttc |
378 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||| |
|
|
| T |
11120440 |
atcagtcccatttttccatgttgttgttgaaggttc |
11120475 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University