View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7297_low_19 (Length: 243)

Name: NF7297_low_19
Description: NF7297
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7297_low_19
NF7297_low_19
[»] chr8 (40 HSPs)
chr8 (3-239)||(26431142-26431380)
chr8 (3-239)||(3455231-3455470)
chr8 (3-239)||(9114961-9115199)
chr8 (3-239)||(33872354-33872592)
chr8 (26-239)||(37429171-37429384)
chr8 (26-239)||(43923916-43924129)
chr8 (26-239)||(21559057-21559269)
chr8 (26-217)||(9736414-9736605)
chr8 (159-239)||(17960830-17960910)
chr8 (159-239)||(355674-355754)
chr8 (159-239)||(1077687-1077767)
chr8 (159-239)||(2657110-2657190)
chr8 (159-239)||(5795082-5795162)
chr8 (159-239)||(7723421-7723501)
chr8 (159-239)||(10308324-10308404)
chr8 (159-239)||(28776502-28776582)
chr8 (159-239)||(29119383-29119463)
chr8 (159-239)||(36894057-36894137)
chr8 (159-239)||(39407359-39407439)
chr8 (159-239)||(13001886-13001966)
chr8 (159-239)||(14450470-14450550)
chr8 (159-239)||(15731654-15731734)
chr8 (159-239)||(41257601-41257681)
chr8 (159-239)||(1588353-1588433)
chr8 (159-239)||(14053687-14053767)
chr8 (159-239)||(32989636-32989715)
chr8 (159-239)||(43085461-43085541)
chr8 (159-239)||(43284713-43284793)
chr8 (159-239)||(43433403-43433483)
chr8 (159-239)||(14244562-14244642)
chr8 (169-239)||(1650644-1650714)
chr8 (159-239)||(39324961-39325040)
chr8 (159-239)||(40520667-40520749)
chr8 (159-209)||(15211263-15211313)
chr8 (159-217)||(36508251-36508309)
chr8 (159-239)||(31918306-31918384)
chr8 (159-239)||(35942300-35942381)
chr8 (169-239)||(33880385-33880455)
chr8 (195-239)||(39133040-39133084)
chr8 (177-212)||(27071944-27071979)
[»] chr3 (44 HSPs)
chr3 (3-239)||(36027267-36027505)
chr3 (3-239)||(53627793-53628031)
chr3 (3-239)||(42856038-42856276)
chr3 (3-239)||(20186696-20186935)
chr3 (3-217)||(46976432-46976649)
chr3 (26-239)||(38770593-38770809)
chr3 (159-239)||(31586328-31586408)
chr3 (159-239)||(44518755-44518835)
chr3 (159-239)||(883877-883957)
chr3 (159-239)||(20495805-20495885)
chr3 (159-239)||(23908849-23908929)
chr3 (159-239)||(31582889-31582969)
chr3 (159-239)||(35154392-35154472)
chr3 (159-239)||(38599163-38599243)
chr3 (159-239)||(43727525-43727605)
chr3 (159-239)||(52961206-52961286)
chr3 (159-239)||(5152878-5152958)
chr3 (159-239)||(9718417-9718497)
chr3 (159-239)||(13342096-13342176)
chr3 (159-239)||(23781300-23781380)
chr3 (159-239)||(24086594-24086674)
chr3 (159-239)||(25068052-25068132)
chr3 (159-239)||(36736171-36736251)
chr3 (159-239)||(39669085-39669165)
chr3 (159-239)||(10656579-10656658)
chr3 (159-239)||(13737250-13737330)
chr3 (159-239)||(21627765-21627845)
chr3 (159-239)||(33305450-33305529)
chr3 (159-239)||(40163529-40163609)
chr3 (159-239)||(47799489-47799569)
chr3 (159-235)||(49256150-49256226)
chr3 (159-239)||(52171225-52171304)
chr3 (169-239)||(36791313-36791383)
chr3 (159-239)||(34941411-34941492)
chr3 (159-239)||(23323710-23323790)
chr3 (159-239)||(42389877-42389957)
chr3 (159-237)||(36259871-36259949)
chr3 (159-239)||(6071474-6071555)
chr3 (159-239)||(10120198-10120279)
chr3 (159-239)||(24814369-24814450)
chr3 (159-239)||(37704087-37704167)
chr3 (159-239)||(40783153-40783232)
chr3 (170-239)||(55153863-55153933)
chr3 (190-239)||(53178536-53178585)
[»] chr4 (46 HSPs)
chr4 (3-239)||(24318233-24318470)
chr4 (3-239)||(13966996-13967235)
chr4 (26-239)||(29762007-29762220)
chr4 (3-239)||(30288952-30289191)
chr4 (3-239)||(30317854-30318093)
chr4 (26-239)||(7972180-7972393)
chr4 (74-239)||(15031497-15031662)
chr4 (114-239)||(6194575-6194700)
chr4 (159-239)||(1618340-1618420)
chr4 (159-239)||(6259340-6259420)
chr4 (159-239)||(23466109-23466189)
chr4 (159-239)||(28255649-28255729)
chr4 (159-239)||(30356774-30356854)
chr4 (159-239)||(34476330-34476410)
chr4 (159-239)||(41789484-41789564)
chr4 (159-239)||(45895661-45895741)
chr4 (161-239)||(918069-918147)
chr4 (159-239)||(13994028-13994108)
chr4 (163-239)||(18963811-18963887)
chr4 (159-239)||(21659515-21659595)
chr4 (159-239)||(22535491-22535571)
chr4 (159-239)||(33821382-33821462)
chr4 (159-239)||(38901647-38901727)
chr4 (159-239)||(48613605-48613685)
chr4 (159-234)||(6238641-6238716)
chr4 (159-239)||(21861515-21861596)
chr4 (159-239)||(21917376-21917457)
chr4 (159-239)||(22731558-22731638)
chr4 (159-239)||(26476621-26476701)
chr4 (159-239)||(47838452-47838532)
chr4 (159-239)||(50181548-50181628)
chr4 (159-239)||(50604740-50604820)
chr4 (159-239)||(1195435-1195515)
chr4 (159-239)||(17971439-17971519)
chr4 (159-239)||(27180091-27180171)
chr4 (159-239)||(34825174-34825254)
chr4 (159-239)||(37998503-37998583)
chr4 (159-239)||(42593090-42593170)
chr4 (159-239)||(44254945-44255025)
chr4 (159-239)||(40132259-40132340)
chr4 (162-239)||(51110521-51110596)
chr4 (159-239)||(20598990-20599069)
chr4 (159-239)||(23475630-23475710)
chr4 (159-239)||(29245719-29245800)
chr4 (177-212)||(10663477-10663512)
chr4 (177-212)||(10877622-10877657)
[»] chr1 (50 HSPs)
chr1 (3-239)||(32073945-32074183)
chr1 (3-239)||(38788148-38788386)
chr1 (3-217)||(52359596-52359810)
chr1 (26-239)||(36304653-36304865)
chr1 (3-239)||(49203803-49204041)
chr1 (3-239)||(30753553-30753793)
chr1 (3-217)||(31675999-31676214)
chr1 (3-214)||(4213569-4213782)
chr1 (3-239)||(13149790-13150017)
chr1 (3-217)||(29357661-29357876)
chr1 (33-239)||(44397111-44397315)
chr1 (26-239)||(51000618-51000830)
chr1 (159-239)||(13242713-13242793)
chr1 (159-239)||(37613127-37613207)
chr1 (159-239)||(42246657-42246737)
chr1 (159-239)||(4469957-4470037)
chr1 (159-239)||(11992283-11992363)
chr1 (159-239)||(13264886-13264966)
chr1 (159-239)||(18053987-18054067)
chr1 (159-239)||(20899016-20899096)
chr1 (159-239)||(25227702-25227782)
chr1 (159-239)||(25859337-25859417)
chr1 (159-239)||(29329790-29329870)
chr1 (159-239)||(31434925-31435005)
chr1 (159-239)||(35894567-35894647)
chr1 (159-239)||(37275881-37275961)
chr1 (159-239)||(37812651-37812731)
chr1 (159-239)||(42148873-42148953)
chr1 (159-239)||(46804058-46804138)
chr1 (159-239)||(47433813-47433893)
chr1 (160-239)||(23742091-23742170)
chr1 (157-239)||(31196524-31196606)
chr1 (159-239)||(10387133-10387213)
chr1 (159-239)||(29674794-29674874)
chr1 (159-239)||(31435237-31435317)
chr1 (159-239)||(32831949-32832029)
chr1 (159-239)||(1023726-1023806)
chr1 (159-239)||(7436841-7436920)
chr1 (159-239)||(20358373-20358453)
chr1 (159-239)||(20552518-20552598)
chr1 (159-239)||(20561502-20561582)
chr1 (159-239)||(22775695-22775775)
chr1 (159-239)||(37587501-37587581)
chr1 (159-239)||(38456870-38456950)
chr1 (159-239)||(38833803-38833882)
chr1 (159-239)||(45508387-45508467)
chr1 (159-239)||(8383855-8383935)
chr1 (159-239)||(17273211-17273290)
chr1 (161-231)||(4631946-4632016)
chr1 (159-195)||(38617517-38617553)
[»] chr7 (46 HSPs)
chr7 (3-239)||(11455715-11455953)
chr7 (3-239)||(34994256-34994494)
chr7 (3-239)||(40245359-40245596)
chr7 (3-239)||(6804173-6804411)
chr7 (3-239)||(7462202-7462440)
chr7 (4-217)||(43774831-43775047)
chr7 (26-239)||(48936794-48937006)
chr7 (3-239)||(43670888-43671127)
chr7 (159-239)||(46229746-46229826)
chr7 (159-239)||(3628232-3628312)
chr7 (159-239)||(17272284-17272364)
chr7 (159-239)||(24466596-24466676)
chr7 (159-239)||(26931582-26931662)
chr7 (159-239)||(34962869-34962949)
chr7 (159-239)||(37007555-37007635)
chr7 (159-239)||(38354267-38354347)
chr7 (159-239)||(39403282-39403362)
chr7 (159-239)||(41080558-41080638)
chr7 (159-239)||(44335647-44335727)
chr7 (159-239)||(46100627-46100707)
chr7 (159-239)||(7337654-7337734)
chr7 (159-239)||(24182172-24182252)
chr7 (159-239)||(30890509-30890589)
chr7 (159-239)||(35004484-35004564)
chr7 (159-239)||(35788450-35788530)
chr7 (159-239)||(38171396-38171476)
chr7 (159-239)||(40340725-40340805)
chr7 (159-239)||(40668221-40668301)
chr7 (159-239)||(42028749-42028829)
chr7 (159-239)||(18031450-18031530)
chr7 (159-239)||(18120544-18120624)
chr7 (159-239)||(21176254-21176334)
chr7 (159-239)||(44744555-44744635)
chr7 (159-239)||(44781689-44781769)
chr7 (159-239)||(47170485-47170565)
chr7 (169-239)||(36786934-36787004)
chr7 (159-217)||(46330186-46330244)
chr7 (159-239)||(8641400-8641480)
chr7 (159-239)||(41641981-41642061)
chr7 (159-239)||(45155412-45155492)
chr7 (159-217)||(24646628-24646686)
chr7 (159-213)||(26303785-26303839)
chr7 (159-217)||(28290508-28290566)
chr7 (159-202)||(41409147-41409190)
chr7 (177-212)||(22599185-22599220)
chr7 (193-239)||(19488877-19488923)
[»] chr2 (24 HSPs)
chr2 (3-239)||(7778083-7778320)
chr2 (3-239)||(2695425-2695662)
chr2 (159-239)||(12178225-12178305)
chr2 (159-239)||(19223160-19223240)
chr2 (159-239)||(26367625-26367705)
chr2 (159-239)||(37224752-37224832)
chr2 (159-239)||(40651252-40651332)
chr2 (159-239)||(16057771-16057851)
chr2 (159-239)||(25992360-25992440)
chr2 (159-239)||(28243116-28243196)
chr2 (159-239)||(33437514-33437594)
chr2 (159-239)||(41799495-41799575)
chr2 (159-239)||(121775-121855)
chr2 (159-239)||(6166478-6166558)
chr2 (159-239)||(32892394-32892474)
chr2 (159-239)||(42793512-42793592)
chr2 (168-239)||(1550461-1550532)
chr2 (159-239)||(3074709-3074789)
chr2 (163-239)||(4356998-4357073)
chr2 (159-239)||(8346262-8346342)
chr2 (159-239)||(44258281-44258361)
chr2 (159-209)||(3434771-3434821)
chr2 (159-209)||(25775298-25775348)
chr2 (178-212)||(44747685-44747719)
[»] chr5 (52 HSPs)
chr5 (18-239)||(6864960-6865182)
chr5 (3-239)||(4104538-4104774)
chr5 (3-238)||(7978729-7978964)
chr5 (159-239)||(4152720-4152800)
chr5 (159-239)||(17526353-17526433)
chr5 (159-239)||(21640403-21640483)
chr5 (159-239)||(25338627-25338707)
chr5 (159-239)||(25482346-25482426)
chr5 (159-239)||(38395876-38395956)
chr5 (159-239)||(40315163-40315243)
chr5 (159-239)||(41412296-41412376)
chr5 (159-239)||(459971-460051)
chr5 (159-239)||(1829696-1829776)
chr5 (159-239)||(8160232-8160312)
chr5 (159-239)||(9772732-9772812)
chr5 (159-239)||(29373718-29373798)
chr5 (159-239)||(32272860-32272940)
chr5 (159-239)||(38143768-38143848)
chr5 (159-239)||(38483421-38483501)
chr5 (159-239)||(39760865-39760945)
chr5 (159-239)||(2061083-2061164)
chr5 (159-236)||(4912090-4912167)
chr5 (159-239)||(19289619-19289700)
chr5 (159-239)||(3508347-3508427)
chr5 (159-239)||(4843957-4844037)
chr5 (159-239)||(6680787-6680867)
chr5 (159-239)||(6845444-6845524)
chr5 (159-239)||(12366784-12366863)
chr5 (159-239)||(12404061-12404141)
chr5 (159-239)||(12736572-12736652)
chr5 (159-239)||(26395685-26395765)
chr5 (159-239)||(36811106-36811186)
chr5 (159-239)||(40195721-40195801)
chr5 (159-239)||(42438293-42438372)
chr5 (160-239)||(12799396-12799475)
chr5 (159-239)||(42341626-42341707)
chr5 (159-239)||(7482726-7482805)
chr5 (159-239)||(8407677-8407757)
chr5 (159-231)||(13306631-13306703)
chr5 (159-239)||(9475680-9475758)
chr5 (159-239)||(18145966-18146046)
chr5 (159-239)||(24361467-24361547)
chr5 (159-239)||(15180950-15181032)
chr5 (159-232)||(17086307-17086380)
chr5 (159-239)||(38465395-38465476)
chr5 (159-239)||(6166380-6166459)
chr5 (159-239)||(16353598-16353677)
chr5 (161-232)||(17086397-17086468)
chr5 (159-239)||(17587529-17587611)
chr5 (159-239)||(11445355-11445436)
chr5 (159-239)||(16868750-16868828)
chr5 (159-239)||(24324843-24324922)
[»] chr6 (19 HSPs)
chr6 (3-239)||(22504521-22504759)
chr6 (26-239)||(23067277-23067491)
chr6 (26-239)||(22821773-22821986)
chr6 (159-239)||(749124-749204)
chr6 (159-239)||(1326766-1326846)
chr6 (159-239)||(2318190-2318270)
chr6 (159-239)||(23767255-23767335)
chr6 (159-239)||(29678486-29678566)
chr6 (159-239)||(1060101-1060181)
chr6 (159-239)||(8812570-8812650)
chr6 (159-239)||(15146278-15146358)
chr6 (159-239)||(24110772-24110852)
chr6 (159-239)||(11625102-11625182)
chr6 (159-239)||(13209578-13209658)
chr6 (159-239)||(20857213-20857293)
chr6 (159-239)||(17994351-17994431)
chr6 (159-239)||(25404577-25404657)
chr6 (159-239)||(11158302-11158384)
chr6 (159-239)||(18738831-18738911)
[»] scaffold0006 (1 HSPs)
scaffold0006 (26-239)||(42649-42861)
[»] scaffold0572 (2 HSPs)
scaffold0572 (26-217)||(990-1181)
scaffold0572 (177-213)||(1475-1511)
[»] scaffold0444 (1 HSPs)
scaffold0444 (159-239)||(7478-7558)
[»] scaffold0320 (1 HSPs)
scaffold0320 (159-239)||(15831-15911)
[»] scaffold0036 (1 HSPs)
scaffold0036 (159-239)||(12793-12873)
[»] scaffold0498 (1 HSPs)
scaffold0498 (159-239)||(11070-11150)
[»] scaffold0041 (1 HSPs)
scaffold0041 (159-239)||(7710-7790)
[»] scaffold0022 (1 HSPs)
scaffold0022 (159-239)||(120924-121004)
[»] scaffold0007 (1 HSPs)
scaffold0007 (159-239)||(41647-41727)
[»] scaffold0343 (1 HSPs)
scaffold0343 (159-239)||(10628-10708)
[»] scaffold0060 (1 HSPs)
scaffold0060 (159-239)||(7378-7457)
[»] scaffold0001 (1 HSPs)
scaffold0001 (159-239)||(187696-187775)
[»] scaffold0057 (1 HSPs)
scaffold0057 (159-196)||(77453-77490)


Alignment Details
Target: chr8 (Bit Score: 180; Significance: 3e-97; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 3 - 239
Target Start/End: Original strand, 26431142 - 26431380
Alignment:
Q  3 caataatatcaaactgacatatcatat--agcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtat 100  Q
    ||||| ||||| || ||||||||||||  ||||||| |||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  26431142 caatactatcagaccgacatatcatatatagcatattaagtaatattcatgtaaaaaagacacaaatcatcagcaaatgaaatatgtgatcggtatgtat 26431241  T
Q  101 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaata 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||    
T  26431242 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccacaattcatcccattattgtcactttaaaaaata 26431341  T
Q  201 cacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||||||||||| ||||| |||||||||||||||    
T  26431342 cacatttttccccattttgaagcctattttgatgtatat 26431380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 3 - 239
Target Start/End: Original strand, 3455231 - 3455470
Alignment:
Q  3 caataatatcaaactgacatatcatat--agcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtat 100  Q
    ||||| ||||| || ||||||||||||  ||||||| |||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  3455231 caatactatcagaccgacatatcatatatagcatattaagtaatattcatgtaaaaaagacacaaatcatcagcaaatgaaatatgtgatcggtatgtat 3455330  T
Q  101 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaata 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  3455331 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccacaaatcatcccattattgtcactttaaaaaata 3455430  T
Q  201 cacatttt-tccccatttcgaagcatattttgatgtatat 239  Q
    |||||||| | || |||| ||||| |||||||||||||||    
T  3455431 cacattttattcctattttgaagcctattttgatgtatat 3455470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 3 - 239
Target Start/End: Complemental strand, 9115199 - 9114961
Alignment:
Q  3 caataatatcaaactgacatatcatatag--catatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtat 100  Q
    ||||| ||||| ||||||||||||||||   ||||| |||||||| ||||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  9115199 caatactatcagactgacatatcatatatatcatattaagtaatattcatgtaaaaaacacacaaatcatcagcaaatgaaatatgtgatcggtatgtat 9115100  T
Q  101 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaata 200  Q
    ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  9115099 agatgaacacttattgagaaatgccaaacacttagacatatatttctttacctttgaaattaatccacaaatcatcccattattgtcactttaaaaaata 9115000  T
Q  201 cacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| ||||||| ||||| |||||||||||||||    
T  9114999 cacattttttcccattttgaagcctattttgatgtatat 9114961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 3 - 239
Target Start/End: Original strand, 33872354 - 33872592
Alignment:
Q  3 caataatatcaaactgacatatcatatag--catatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtat 100  Q
    ||||| ||||| || |||||||||||||   ||||| ||| |||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  33872354 caatactatcagaccgacatatcatatataacatatgaaggaatattcatgtaaaaaagacacaaatcatcagcaaatgaaatatgtgatcggtatgtat 33872453  T
Q  101 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaata 200  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  33872454 agaggaacacttattgagaaatggcaaacacttagacatatatttctttacctttgaaattaatccacaaatcatcccattattgtcactttaaaaaata 33872553  T
Q  201 cacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||||||||||| ||||  |||||||||||||||    
T  33872554 cacatttttccccattttgaagtctattttgatgtatat 33872592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 26 - 239
Target Start/End: Original strand, 37429171 - 37429384
Alignment:
Q  26 atatagcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtatagaggaacacttattgagaaatgtc 125  Q
    ||||||||||| |||||||| |||||||||||||  ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  37429171 atatagcatattaagtaatattcatgtaaaaaagacacaaatcatcagcaaatgaaatatgtgatagatatgtatagaggaacacttattgagaaatgtc 37429270  T
Q  126 aaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcat 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||| ||||| |    
T  37429271 aaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattgttgtcactttaaaaaatacacaattttccccattttgaagcct 37429370  T
Q  226 attttgatgtatat 239  Q
    ||  ||||||||||    
T  37429371 atgatgatgtatat 37429384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 26 - 239
Target Start/End: Original strand, 43923916 - 43924129
Alignment:
Q  26 atatagcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtatagaggaacacttattgagaaatgtc 125  Q
    ||||||||||| |||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43923916 atatagcatattaagtaatattcatgtaaaaaagacacaaatcatcagcaaatgaaatatgtgatcggtatgtatagaggaacacttattgagaaatgtc 43924015  T
Q  126 aaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcat 225  Q
    | |||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||  ||||||||||||| ||||||| |||||| | ||| |    
T  43924016 atacacttggacatatatttatttacctttgaaattaatccacaaatcatcccattattgtcgctttaaaaaatacatatttttctccattttggagcct 43924115  T
Q  226 attttgatgtatat 239  Q
    ||||||||||||||    
T  43924116 attttgatgtatat 43924129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 26 - 239
Target Start/End: Complemental strand, 21559269 - 21559057
Alignment:
Q  26 atatagcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtatagaggaacacttattgagaaatgtc 125  Q
    ||||||||||| |||||||| |||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  21559269 atatagcatattaagtaatattcatgtaaaaaagacacaaatcatcagcaaataaaatatgtgatcggtatgtatagaggaacacttattgagaaatgtc 21559170  T
Q  126 aaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcat 225  Q
    ||||||||| ||||||||||| |||||||| ||||||||||| |||| |||| ||||||| || ||||||||||||||| ||||| |||||| ||||| |    
T  21559169 aaacacttacacatatatttccttacctttaaaattaatccacaaattatcctattattgccactttaaaaaatacaca-ttttctccattttgaagcct 21559071  T
Q  226 attttgatgtatat 239  Q
    | ||||||||||||    
T  21559070 aatttgatgtatat 21559057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 26 - 217
Target Start/End: Complemental strand, 9736605 - 9736414
Alignment:
Q  26 atatagcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtatagaggaacacttattgagaaatgtc 125  Q
    ||||| ||||| |||| ||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9736605 atatatcatattaagttatattcatgtaaaaaagacacaaatcatcagcaaatgaaatatgtgatcggtatgtatagaggaacacttattgataaatgtc 9736506  T
Q  126 aaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccattt 217  Q
    ||||| ||||||||||||||||| |||| ||||||||||||| ||||||| | |||||||| | ||||||||||||| ||||||||||||||    
T  9736505 aaacatttagacatatatttcttcacctatgaaattaatccacaaatcattcaattattgttactttaaaaaatacatatttttccccattt 9736414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 17960830 - 17960910
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  17960830 attaatccacaaatcatcccattattgtcaatttaaaaaatacatatttttccccattttggagcctattttgatgtatat 17960910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 355674 - 355754
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||| ||||||| ||||| |||||||||||||||    
T  355674 attaatccacaaatcatcccattattgtcactttaaaaaatacatattttttcccattttgaagcctattttgatgtatat 355754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 1077687 - 1077767
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  1077687 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 1077767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 2657190 - 2657110
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  2657190 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 2657110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 5795082 - 5795162
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  5795082 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 5795162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 7723501 - 7723421
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  7723501 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 7723421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 10308324 - 10308404
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  10308324 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 10308404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 28776502 - 28776582
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  28776502 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 28776582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 29119463 - 29119383
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  29119463 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 29119383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 36894137 - 36894057
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  36894137 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 36894057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 39407439 - 39407359
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  39407439 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 39407359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 13001886 - 13001966
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| ||||||||| |||| | ||| |||||||||||||||    
T  13001886 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccctattttggagcctattttgatgtatat 13001966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 14450470 - 14450550
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| ||||||||| |||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  14450470 attaatccacaaatcatcctattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 14450550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 15731734 - 15731654
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||| || | ||| |||||||||||||||    
T  15731734 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccactttggagcctattttgatgtatat 15731654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 41257681 - 41257601
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| ||||| |||||||| | ||| |||||||||||||||    
T  41257681 attaatccacaaatcatcccattattgtcactttaaaaaatacatattttcccccattttggagcctattttgatgtatat 41257601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 1588353 - 1588433
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||| ||||| | ||| ||||||||| |||||    
T  1588353 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttcctcattttggagcctattttgatatatat 1588433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 14053687 - 14053767
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||   ||  |||||||||||||||    
T  14053687 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttagagtctattttgatgtatat 14053767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 32989636 - 32989715
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||| ||||||||| |||||||||||||| | ||| |||||||||||||||    
T  32989636 attaatccacaaatcatcccattattgtcacttt-aaaaatacatatttttccccattttggagcctattttgatgtatat 32989715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 43085461 - 43085541
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    |||||| || |||||||||||||||||||| ||||||||||||| ||||||| |||||| | ||| |||||||||||||||    
T  43085461 attaattcacaaatcatcccattattgtcactttaaaaaatacatatttttctccattttggagcctattttgatgtatat 43085541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 43284713 - 43284793
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||| ||| ||||| |||||||| | ||| |||||||||||||||    
T  43284713 attaatccacaaatcatcccattattgtcactttaaaaaacacatattttcccccattttggagcctattttgatgtatat 43284793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 43433403 - 43433483
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||  ||||||| | ||| |||||||||||||||    
T  43433403 attaatccacaaatcatcccattattgtcactttaaaaaatacatattttctcccattttggagcctattttgatgtatat 43433483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 14244642 - 14244562
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||| ||||||||||| |||||||||||||  ||||||||||||| | ||  |||||||||||||||    
T  14244642 attaatccacaaatcatctcattattgtcactttaaaaaatacatgtttttccccattttggagtctattttgatgtatat 14244562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 1650714 - 1650644
Alignment:
Q  169 aaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    |||||||||||||||||||| ||||||||||||| |||||||| |||||   ||| |||||||||||||||    
T  1650714 aaatcatcccattattgtcactttaaaaaatacatatttttcctcattttagagcctattttgatgtatat 1650644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 39324961 - 39325040
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| |||||| |||||| | ||||||||||||   ||| |||||||||||||||    
T  39324961 attaatccacaaatcatcccattattgtcactttaaagaatacata-ttttccccatttttgagcctattttgatgtatat 39325040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 40520667 - 40520749
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacaca--tttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |  ||||| |||||||   ||| |||||||||||||||    
T  40520667 attaatccacaaatcatcccattattgtcactttaaaaaatacatattttttttcccatttttgagcctattttgatgtatat 40520749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 15211263 - 15211313
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacattttt 209  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| ||||||    
T  15211263 attaatccacaaatcatcccattattgtcactttaaaaaatacatattttt 15211313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 36508251 - 36508309
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccattt 217  Q
    ||||||||| |||||||||||||||||||| ||||||||||| | ||||||| ||||||    
T  36508251 attaatccacaaatcatcccattattgtcactttaaaaaatatatatttttctccattt 36508309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 31918306 - 31918384
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||| |||||  ||||||| | ||| ||||||||| |||||    
T  31918306 attaatccacaaatcatcacattattgtcactttaaaaaatacatatttt--cccattttggagcctattttgatatatat 31918384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 35942381 - 35942300
Alignment:
Q  159 attaatccataaatcatcccattattgtca-atttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| ||||||||||||||||||||  ||||||||||||| |||||||| | ||| | |||  ||||||||||||||    
T  35942381 attaatccacaaatcatcccattattgtcacttttaaaaaatacatatttttcctctttttggagccgattttgatgtatat 35942300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 33880385 - 33880455
Alignment:
Q  169 aaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    |||||||| | ||||||||| |||||||||| || |||||| ||||||| | ||| |||||||||||||||    
T  33880385 aaatcatctcgttattgtcactttaaaaaatgcatattttttcccattttggagcctattttgatgtatat 33880455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 39133040 - 39133084
Alignment:
Q  195 aaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    |||||||||||||| |||||||| ||||| |||||||||||||||    
T  39133040 aaaatacacattttcccccattttgaagcctattttgatgtatat 39133084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 212
Target Start/End: Complemental strand, 27071979 - 27071944
Alignment:
Q  177 ccattattgtcaatttaaaaaatacacatttttccc 212  Q
    |||||||||| |||||||||||||||||||||||||    
T  27071979 ccattattgttaatttaaaaaatacacatttttccc 27071944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 180; Significance: 3e-97; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 3 - 239
Target Start/End: Complemental strand, 36027505 - 36027267
Alignment:
Q  3 caataatatcaaactgacatatcatat--agcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtat 100  Q
    ||||| ||||| || ||||||||||||  ||||||| |||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  36027505 caatactatcagaccgacatatcatatgtagcatattaagtaatattcatgtaaaaaagacacaaatcatcagcaaatgaaatatgtgatcggtatgtat 36027406  T
Q  101 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaata 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  36027405 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccacaaatcatcccattattgtcactttaaaaaata 36027306  T
Q  201 cacatttttccccatttcgaagcatattttgatgtatat 239  Q
    || |||||||||||||| ||||| |||||||||||||||    
T  36027305 catatttttccccattttgaagcctattttgatgtatat 36027267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 3 - 239
Target Start/End: Original strand, 53627793 - 53628031
Alignment:
Q  3 caataatatcaaactgacatatcatat--agcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtat 100  Q
    ||||| ||||| || ||||||||||||  ||||||| |||||||| |||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  53627793 caatactatcagaccgacatatcatatatagcatattaagtaatattcatgtaaaaaagacataaatcatcagcaaatgaaatatgtgatcggtatgtat 53627892  T
Q  101 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaata 200  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  53627893 agaggaacacttattgagaaatgtcaaacacttatacatatatttctttacctttgaaattaatccacaaatcatcccattattgtcactttaaaaaata 53627992  T
Q  201 cacatttttccccatttcgaagcatattttgatgtatat 239  Q
    |||||||||||| |||| ||||| |||||||||||||||    
T  53627993 cacatttttcccaattttgaagcctattttgatgtatat 53628031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 3 - 239
Target Start/End: Complemental strand, 42856276 - 42856038
Alignment:
Q  3 caataatatcaaactgacatatcatatag--catatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtat 100  Q
    ||||| ||||| || |||||||||||||   ||||| |||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  42856276 caatactatcagaccgacatatcatatataacatattaagtaatattcatgtaaaaaagacacaaatcatcagcaaatgaaatatgtgatcggtatgtat 42856177  T
Q  101 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaata 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| |||||||||||    
T  42856176 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaaataatccacaaatcatccaattattgtcactttaaaaaata 42856077  T
Q  201 cacatttttccccatttcgaagcatattttgatgtatat 239  Q
    |||||||| |||||||| | ||| |||||||||||||||    
T  42856076 cacattttcccccattttggagcctattttgatgtatat 42856038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 3 - 239
Target Start/End: Complemental strand, 20186935 - 20186696
Alignment:
Q  3 caataatatcaaactgacatatcatata--gcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtat 100  Q
    ||||| ||||| || |||||||||||||  || ||| |||||| | |||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  20186935 caatactatcagaccgacatatcatatatagcgtattaagtaacattcatgtaaaaaagacacaaatcatcagcaaatgaaatatgtgatcggtatgtat 20186836  T
Q  101 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaata 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||| |||||||||||    
T  20186835 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttgcctatgaaattaatccacaaatcatcccattattgtcactttaaaaaata 20186736  T
Q  201 cacat--ttttccccatttcgaagcatattttgatgtatat 239  Q
    |||||  |||| ||||||| ||||| |||||||||||||||    
T  20186735 cacattttttttcccattttgaagc-tattttgatgtatat 20186696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 3 - 217
Target Start/End: Original strand, 46976432 - 46976649
Alignment:
Q  3 caataatatcaaactgacatatcatata--gcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtat 100  Q
    ||||| ||||| || |||||||||||||  |||||| |||||||| |||||||||||||  ||||||||| |||||||||||||||||||||||||||||    
T  46976432 caatactatcagaccgacatatcatatatagcatattaagtaatattcatgtaaaaaagacacaaatcataagcaaatgaaatatgtgatcggtatgtat 46976531  T
Q  101 agaggaa-cacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaat 199  Q
    ||||||| ||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||| |||||||| ||||| ||||| ||||||||||    
T  46976532 agaggaaacacttattgagaaatgtcaaacagttagtcatatatttcttcacctttgaaattaatccacaaatcatctcattactgtcactttaaaaaat 46976631  T
Q  200 acacatttttccccattt 217  Q
    ||||||||| ||||||||    
T  46976632 acacattttcccccattt 46976649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 26 - 239
Target Start/End: Complemental strand, 38770809 - 38770593
Alignment:
Q  26 atatagcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtatagaggaacacttattgagaaatgtc 125  Q
    ||||||||||| |||||||| | || ||||||||  |||||  |||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  38770809 atatagcatattaagtaatatt-atctaaaaaagacacaaactatcaacaaatgaaatatgtgatcgatatgtaaagaggaacacttattgagaaatgtc 38770711  T
Q  126 aaacacttagacatatat----ttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaa 221  Q
    ||| ||||||||||||||    |||||||||||||||||||||||| |||| ||| ||||||||||| ||||||||||||| ||||| || ||||| |||    
T  38770710 aaatacttagacatatatatatttctttacctttgaaattaatccacaaatgatctcattattgtcactttaaaaaatacatattttccctcattttgaa 38770611  T
Q  222 gcatattttgatgtatat 239  Q
    || |||||||||||||||    
T  38770610 gcctattttgatgtatat 38770593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 31586328 - 31586408
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | |||||||||||||||||||    
T  31586328 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcatattttgatgtatat 31586408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 44518755 - 44518835
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| ||||| |||||||||||||||    
T  44518755 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttgaagcctattttgatgtatat 44518835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 883877 - 883957
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  883877 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 883957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 20495805 - 20495885
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  20495805 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 20495885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 23908849 - 23908929
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  23908849 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 23908929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 31582969 - 31582889
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  31582969 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 31582889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 35154392 - 35154472
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  35154392 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 35154472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 38599243 - 38599163
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| ||||||||| |||| ||||| |||||||||||||||    
T  38599243 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccctattttgaagcctattttgatgtatat 38599163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 43727525 - 43727605
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||| |||||||||||||| ||||| |||||||||||||||    
T  43727525 attaatccacaaatcatctcattattgtcactttaaaaaatacatatttttccccattttgaagcctattttgatgtatat 43727605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 52961286 - 52961206
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||| | ||| |||||||||||||||    
T  52961286 attaatccacaaatcatcccattattgtcacttaaaaaaatacacatttttccccattttggagcctattttgatgtatat 52961206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 5152878 - 5152958
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| ||||||| |||||| | ||| |||||||||||||||    
T  5152878 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttctccattttggagcctattttgatgtatat 5152958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 9718417 - 9718497
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||| ||||||| | ||| |||||||||||||||    
T  9718417 attaatccacaaatcatcccattattgtcactttaaaaaatacatattttttcccattttggagcctattttgatgtatat 9718497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 13342096 - 13342176
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||| ||||||| | ||| |||||||||||||||    
T  13342096 attaatccacaaatcatcccattattgtcactttaaaaaatacatattttttcccattttggagcctattttgatgtatat 13342176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 23781380 - 23781300
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  23781380 attaatccacaaatcatcacattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 23781300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 24086594 - 24086674
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| ||||| |||||||| | ||| |||||||||||||||    
T  24086594 attaatccacaaatcatcccattattgtcactttaaaaaatacatattttcccccattttggagcctattttgatgtatat 24086674  T

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Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 25068052 - 25068132
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||| ||||||| | ||| |||||||||||||||    
T  25068052 attaatccacaaatcatcccattattgtcactttaaaaaatacatattttttcccattttggagcctattttgatgtatat 25068132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 36736251 - 36736171
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| |  || |||||||||||||||    
T  36736251 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggggcctattttgatgtatat 36736171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 39669165 - 39669085
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||| || | ||| |||||||||||||||    
T  39669165 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccactttggagcctattttgatgtatat 39669085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 10656579 - 10656658
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| | |||||||||||| | ||| |||||||||||||||    
T  10656579 attaatccacaaatcatcccattattgtcactttaaaaaatacata-ttttccccattttggagcctattttgatgtatat 10656658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 13737330 - 13737250
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||| ||||||||||| || |||||||||| |||||||||||||| | ||| |||||||||||||||    
T  13737330 attaatccacaaatcatctcattattgtcacttaaaaaaatacatatttttccccattttggagcctattttgatgtatat 13737250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 21627765 - 21627845
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||| ||||| ||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  21627765 attaatccacaaatcatctcattactgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 21627845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 33305529 - 33305450
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| | |||||||||||| | ||| |||||||||||||||    
T  33305529 attaatccacaaatcatcccattattgtcactttaaaaaatacata-ttttccccattttggagcctattttgatgtatat 33305450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 40163529 - 40163609
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| ||||||| |||||||||||| ||||||||||||| |||||||||||||| | ||  |||||||||||||||    
T  40163529 attaatccacaaatcattccattattgtcactttaaaaaatacatatttttccccattttggagtctattttgatgtatat 40163609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 47799489 - 47799569
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||| | |||||||| ||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  47799489 attaatcaagaaatcatcacattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 47799569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 49256150 - 49256226
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgt 235  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| ||||||| |||||| | ||| |||||||||||    
T  49256150 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttctccattttggagcctattttgatgt 49256226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 52171304 - 52171225
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| | |||||||||||| | ||| |||||||||||||||    
T  52171304 attaatccacaaatcatcccattattgtcactttaaaaaatacata-ttttccccattttggagcctattttgatgtatat 52171225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 36791383 - 36791313
Alignment:
Q  169 aaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    |||||||||||||||||||| ||||||||||||| |||||| || |||| | |||||||||||||||||||    
T  36791383 aaatcatcccattattgtcactttaaaaaatacatattttttcctattttggagcatattttgatgtatat 36791313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 34941411 - 34941492
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttt-tccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||  |||||||| | ||| |||||||||||||||    
T  34941411 attaatccacaaatcatcccattattgtcactttaaaaaatacatattttccccccattttggagcctattttgatgtatat 34941492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 23323710 - 23323790
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||| ||||||||||||||| ||||||||||||| ||||  |||||||| | ||| |||||||||||||||    
T  23323710 attaatccacaaatgatcccattattgtcactttaaaaaatacatatttccccccattttggagcctattttgatgtatat 23323790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 42389877 - 42389957
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||| || |||||||||||| ||||||||||||| |||||| ||||||| | ||| |||||||||||||||    
T  42389877 attaatccacaaattataccattattgtcactttaaaaaatacatattttttcccattttggagcctattttgatgtatat 42389957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 237
Target Start/End: Original strand, 36259871 - 36259949
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtat 237  Q
    ||||||||| |||||||| ||||||| ||| ||||||||||||| ||||| |||||||| | ||| |||||||||||||    
T  36259871 attaatccacaaatcatctcattattatcactttaaaaaatacatattttcccccattttggagcctattttgatgtat 36259949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 6071474 - 6071555
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacaca-tttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| | ||||| |||||||   ||| |||||||||||||||    
T  6071474 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttttcccatttttgagcctattttgatgtatat 6071555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 10120279 - 10120198
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacaca-tttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| | |||||  |||||| | ||| |||||||||||||||    
T  10120279 attaatccacaaatcatcccattattgtcactttaaaaaatacatattttttttccattttggagcctattttgatgtatat 10120198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 24814450 - 24814369
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacaca-tttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| | |||||  |||||| | ||| |||||||||||||||    
T  24814450 attaatccacaaatcatcccattattgtcactttaaaaaatacatattttttttccattttggagcctattttgatgtatat 24814369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 37704087 - 37704167
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| ||||||||||||||||| || ||||||||||||| ||||||  | |||| | ||| |||||||||||||||    
T  37704087 attaatccagaaatcatcccattattgccactttaaaaaatacatatttttttctattttggagcctattttgatgtatat 37704167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 40783153 - 40783232
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| ||||||||||||||||| || ||||||||||||| | |||||| ||||| | ||| |||||||||||||||    
T  40783153 attaatccacaaatcatcccattattgccactttaaaaaatacata-ttttcctcattttggagcctattttgatgtatat 40783232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 55153863 - 55153933
Alignment:
Q  170 aatcatcccattattgtcaatttaaaaaatacaca-tttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||||||||||||| ||||||||||||| | ||||| ||||||| | | | |||||||||||||||    
T  55153863 aatcatcccattattgtcactttaaaaaatacatatttttttcccattttggaacctattttgatgtatat 55153933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 53178585 - 53178536
Alignment:
Q  190 tttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||||||| ||||||||||||||   ||| |||||||||||||||    
T  53178585 tttaaaaaatacatatttttccccattttagagcctattttgatgtatat 53178536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 176; Significance: 6e-95; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 3 - 239
Target Start/End: Original strand, 24318233 - 24318470
Alignment:
Q  3 caataatatcaaactgacatatcatat--agcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtat 100  Q
    ||||| ||||| || ||||||||||||  ||||||| |||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  24318233 caatactatcagaccgacatatcatatatagcatattaagtaatattcatgtaaaaaagacacaaatcatcagcaaatgaaatatgtgatcggtatgtat 24318332  T
Q  101 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaata 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  24318333 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccacaaatcatcccattattgtcactttaaaaaata 24318432  T
Q  201 cacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| ||||||| ||||| |||||||||||||||    
T  24318433 cacattttt-cccattttgaagcctattttgatgtatat 24318470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 3 - 239
Target Start/End: Complemental strand, 13967235 - 13966996
Alignment:
Q  3 caataatatcaaactgacatatcatata--gcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtat 100  Q
    ||||| ||||| || |||||||||||||  |||||| |||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  13967235 caatactatcagaccgacatatcatatatagcatattaagtaatattcatgtaaaaaagacacaaatcatcagcaaatgaaatatgtgatcggtatgtat 13967136  T
Q  101 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaat-ttaaaaaat 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| | | |||||||    
T  13967135 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccacaaatcatcacattattgtcactataaaaaaat 13967036  T
Q  200 acacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||| |||||||||||||| ||||| |||||||||||||||    
T  13967035 acaaatttttccccattttgaagcctattttgatgtatat 13966996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 26 - 239
Target Start/End: Original strand, 29762007 - 29762220
Alignment:
Q  26 atatagcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtatagaggaacacttattgagaaatgtc 125  Q
    ||||| ||||| |||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29762007 atataacatattaagtaatattcatgtaaaaaagacacaaatcatcagcaaatgaaatatgtgatcggtatgtatagaggaacacttattgagaaatgtc 29762106  T
Q  126 aaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcat 225  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||| ||||||  |||||| ||||| |    
T  29762107 aaacacttagacatatatttctttacctttcaaattaatccacaaatcatcccattattgtcactttaaaaaatacatatttttttccattttgaagcct 29762206  T
Q  226 attttgatgtatat 239  Q
    ||||||||||||||    
T  29762207 attttgatgtatat 29762220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 3 - 239
Target Start/End: Complemental strand, 30289191 - 30288952
Alignment:
Q  3 caataatatcaaactgacatatcatatag--catatcaagtaatactcatgtaaaaaaggt-acaaatcatcagcaaatgaaatatgtgatcggtatgta 99  Q
    ||||| ||||| || |||||||||||||   ||||| |||||||| |||||||||||| |  ||||||||||| ||||||||||||||||||||||||||    
T  30289191 caatactatcagaccgacatatcatatataacatattaagtaatattcatgtaaaaaaagacacaaatcatcatcaaatgaaatatgtgatcggtatgta 30289092  T
Q  100 tagaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaat 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  30289091 tagaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccacaaatcatcccattattgtcactttaaaaaat 30288992  T
Q  200 acacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||| ||||| ||||||||  |||| |||||||||||||||    
T  30288991 acatattttcccccattttcaagcctattttgatgtatat 30288952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 3 - 239
Target Start/End: Complemental strand, 30318093 - 30317854
Alignment:
Q  3 caataatatcaaactgacatatcatatag--catatcaagtaatactcatgtaaaaaaggt-acaaatcatcagcaaatgaaatatgtgatcggtatgta 99  Q
    ||||| ||||| || |||||||||||||   ||||| |||||||| |||||||||||| |  ||||||||||| ||||||||||||||||||||||||||    
T  30318093 caatactatcagaccgacatatcatatataacatattaagtaatattcatgtaaaaaaagacacaaatcatcatcaaatgaaatatgtgatcggtatgta 30317994  T
Q  100 tagaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaat 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  30317993 tagaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccacaaatcatcccattattgtcactttaaaaaat 30317894  T
Q  200 acacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||| ||||| ||||||||  |||| |||||||||||||||    
T  30317893 acatattttcccccattttcaagcctattttgatgtatat 30317854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 26 - 239
Target Start/End: Complemental strand, 7972393 - 7972180
Alignment:
Q  26 atatagcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtatagaggaacacttattgagaaatgtc 125  Q
    ||||| ||||| |||||||| |||||||||||||  |||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||    
T  7972393 atataacatattaagtaatattcatgtaaaaaagacacaaatcatcagcaaatgaaatatgtgataaatatgtatagaggaacacttattgagaaatgtc 7972294  T
Q  126 aaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcat 225  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||  ||||||||||||| ||||| |    
T  7972293 aaacacttagacatatatttctttacctttgaaattaatccacaaattatcccattattgtcactttaaaaaatacatttttttccccattttgaagcct 7972194  T
Q  226 attttgatgtatat 239  Q
    ||||||||||||||    
T  7972193 attttgatgtatat 7972180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 74 - 239
Target Start/End: Original strand, 15031497 - 15031662
Alignment:
Q  74 caaatgaaatatgtgatcggtatgtatagaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatc 173  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  15031497 caaatgaaatatgtgatcagtatgtatagaggaacacttattgagaaatgtcaaacacttagacatatatttctttatctttgaaattaatccaaaaatc 15031596  T
Q  174 atcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    |||||||||||| || |||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  15031597 atcccattattgccactttaaaaaatacacatttttccccattttgaagcctattttgatgtatat 15031662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 114 - 239
Target Start/End: Original strand, 6194575 - 6194700
Alignment:
Q  114 ttgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaatacacatttttcccc 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||    
T  6194575 ttgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccacaaatcatcccattattgtcactttaaaaaatacacattttccccc 6194674  T
Q  214 atttcgaagcatattttgatgtatat 239  Q
    |||| ||||| |||||||||||||||    
T  6194675 attttgaagcctattttgatgtatat 6194700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 1618340 - 1618420
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| ||||| |||||||||||||||    
T  1618340 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttgaagcctattttgatgtatat 1618420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 6259420 - 6259340
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  6259420 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 6259340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 23466109 - 23466189
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  23466109 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 23466189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 28255649 - 28255729
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  28255649 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 28255729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 30356854 - 30356774
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  30356854 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 30356774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 34476410 - 34476330
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  34476410 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 34476330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 41789564 - 41789484
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  41789564 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 41789484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 45895741 - 45895661
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  45895741 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 45895661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 239
Target Start/End: Complemental strand, 918147 - 918069
Alignment:
Q  161 taatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  918147 taatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 918069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 13994108 - 13994028
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| ||||||||| |||||    
T  13994108 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatatatat 13994028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 239
Target Start/End: Original strand, 18963811 - 18963887
Alignment:
Q  163 atccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  18963811 atccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 18963887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 21659595 - 21659515
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| ||||| |||||||| | ||| |||||||||||||||    
T  21659595 attaatccacaaatcatcccattattgtcactttaaaaaatacatattttcccccattttggagcctattttgatgtatat 21659515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 22535571 - 22535491
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  22535571 attaatccacaaatcatctcattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 22535491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 33821462 - 33821382
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||  |||||||||||||||    
T  33821462 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagtctattttgatgtatat 33821382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 38901727 - 38901647
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||   ||| |||||||||||||||    
T  38901727 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttagagcctattttgatgtatat 38901647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 48613685 - 48613605
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | | | |||||||||||||||    
T  48613685 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggaacctattttgatgtatat 48613605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 159 - 234
Target Start/End: Complemental strand, 6238716 - 6238641
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatg 234  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| ||||||||||    
T  6238716 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatg 6238641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 21861596 - 21861515
Alignment:
Q  159 attaatccataaatcatcccattattgtcaattt-aaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||| |||||||||||||| | ||| |||||||||||||||    
T  21861596 attaatccacaaatcatcccattattgtcactttaaaaaaatacatatttttccccattttggagcctattttgatgtatat 21861515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 21917457 - 21917376
Alignment:
Q  159 attaatccataaatcatcccattattgtcaattt-aaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||| |||||||||||||| | ||| |||||||||||||||    
T  21917457 attaatccacaaatcatcccattattgtcactttaaaaaaatacatatttttccccattttggagcctattttgatgtatat 21917376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 22731558 - 22731638
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| ||||| ||||||||   ||| |||||||||||||||    
T  22731558 attaatccacaaatcatcccattattgtcactttaaaaaatacatattttgccccatttttgagcctattttgatgtatat 22731638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 26476701 - 26476621
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| |||||||||| || ||||||||||||||   ||| |||||||||||||||    
T  26476701 attaatccacaaatcatcccattattgtcactttaaaaaattcatatttttccccatttttgagcctattttgatgtatat 26476621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 47838452 - 47838532
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||| | |||||||| ||||| | ||| |||||||||||||||    
T  47838452 attaatccacaaatcatcccattattgtcactttaaaaaataaatatttttcctcattttggagcctattttgatgtatat 47838532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 50181628 - 50181548
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| ||||||||| |||||||||| ||||||||||||| |||||||||||||| | | | |||||||||||||||    
T  50181628 attaatccacaaatcatcctattattgtcactttaaaaaatacatatttttccccattttggaacctattttgatgtatat 50181548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 50604820 - 50604740
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| ||||||| |||||||||||| ||||||||||| | |||||||||||||| | ||| |||||||||||||||    
T  50604820 attaatccacaaatcattccattattgtcactttaaaaaatatatatttttccccattttggagcctattttgatgtatat 50604740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 1195435 - 1195515
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||| |||||||||||  || ||||||||| |||||||||||||| | ||| |||||||||||||||    
T  1195435 attaatccacaaatcatctcattattgtcacctttaaaaatacatatttttccccattttggagcctattttgatgtatat 1195515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 17971439 - 17971519
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||  |||||||   ||| |||||||||||||||    
T  17971439 attaatccacaaatcatcccattattgtcactttaaaaaatacatattttctcccattttagagcctattttgatgtatat 17971519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 27180171 - 27180091
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||  ||| ||||||||| |||||| ||||||| | ||| |||||||||||||||    
T  27180171 attaatccacaaatcatcccattattgtcgctttcaaaaatacatattttttcccattttggagcctattttgatgtatat 27180091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 34825174 - 34825254
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||| |||||| || |||| | ||| |||||||||||||||    
T  34825174 attaatccacaaatcatcacattattgtcactttaaaaaatacatattttttcctattttggagcctattttgatgtatat 34825254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 37998503 - 37998583
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| ||||||||| |||||||||| ||||||||||||| |||||| ||||||| | | | |||||||||||||||    
T  37998503 attaatccacaaatcatcctattattgtcactttaaaaaatacatattttttcccattttggaacctattttgatgtatat 37998583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 42593170 - 42593090
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||| | ||||||||| ||||||||||||| ||||| |||||||| | ||| |||||||||||||||    
T  42593170 attaatccacaaatcatctcgttattgtcactttaaaaaatacatattttcccccattttggagcctattttgatgtatat 42593090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 44255025 - 44254945
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| | |||||| ||||||||||| ||||||||||||| ||||| |||||||| | ||| |||||||||||||||    
T  44255025 attaatccacacatcatctcattattgtcactttaaaaaatacatattttcccccattttggagcctattttgatgtatat 44254945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 40132259 - 40132340
Alignment:
Q  159 attaatccataaatcatcccattattgtcaattt-aaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||| ||||| |||||||| | ||  |||||||||||||||    
T  40132259 attaatccacaaatcatcccattattgtcactttaaaaaaatacatattttcccccattttggagtctattttgatgtatat 40132340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 51110521 - 51110596
Alignment:
Q  162 aatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||  |||||| ||||| | |||||||||||||    
T  51110521 aatccataaatcatcccattattgtcactttaaaaaatacatattttt-tccattttgaagcct-ttttgatgtatat 51110596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 20599069 - 20598990
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||| | | ||||||||||||   ||| |||||||||||||||    
T  20599069 attaatccacaaatcatcccattattgtcactttaaaaaatatata-ttttccccattttagagcctattttgatgtatat 20598990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 23475630 - 23475710
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||| | |||||||| ||||||||||| ||||||||||||| |||||||||||||| |  || |||||| ||||||||    
T  23475630 attaatctacaaatcatctcattattgtcactttaaaaaatacatatttttccccattttggggcctattttcatgtatat 23475710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 29245800 - 29245719
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacaca-tttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||| | |||||||||||||||||||| ||||||||||||| | ||||| | ||||| | ||| |||||||||||||||    
T  29245800 attaatctacaaatcatcccattattgtcactttaaaaaatacatatttttttctcattttggagcctattttgatgtatat 29245719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 212
Target Start/End: Original strand, 10663477 - 10663512
Alignment:
Q  177 ccattattgtcaatttaaaaaatacacatttttccc 212  Q
    |||||||||||| |||||||||||||||||||||||    
T  10663477 ccattattgtcactttaaaaaatacacatttttccc 10663512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 212
Target Start/End: Original strand, 10877622 - 10877657
Alignment:
Q  177 ccattattgtcaatttaaaaaatacacatttttccc 212  Q
    |||||||||||| |||||||||||||||||||||||    
T  10877622 ccattattgtcactttaaaaaatacacatttttccc 10877657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 176; Significance: 6e-95; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 3 - 239
Target Start/End: Complemental strand, 32074183 - 32073945
Alignment:
Q  3 caataatatcaaactgacatatcatata--gcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtat 100  Q
    ||||| ||||| || |||||||||||||  |||||| |||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  32074183 caatactatcagaccgacatatcatatatagcatattaagtaatattcatgtaaaaaagacacaaatcatcagcaaatgaaatatgtgatcggtatgtat 32074084  T
Q  101 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaata 200  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  32074083 tgaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccacaaatcatcccattattgtcactttaaaaaata 32073984  T
Q  201 cacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||||| ||||| ||||| |||||||||||||||    
T  32073983 cacatttttcctcattttgaagcctattttgatgtatat 32073945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 3 - 239
Target Start/End: Original strand, 38788148 - 38788386
Alignment:
Q  3 caataatatcaaactgacatatcatat--agcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtat 100  Q
    ||||| ||||| || ||||||||||||  ||||||| |||||||| |||||||| ||||  ||||||||||||||||| |||||||||||||||||||||    
T  38788148 caatactatcagacagacatatcatatatagcatattaagtaatattcatgtaagaaagacacaaatcatcagcaaataaaatatgtgatcggtatgtat 38788247  T
Q  101 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaata 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||    
T  38788248 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccacaaatcattccattattgtcactttaaaaaata 38788347  T
Q  201 cacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||||||||||| | ||| |||||||||||||||    
T  38788348 cacatttttccccattttgtagcctattttgatgtatat 38788386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 3 - 217
Target Start/End: Complemental strand, 52359810 - 52359596
Alignment:
Q  3 caataatatcaaactgacatatcatatagcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtatag 102  Q
    ||||| ||||| |||||||||||||||| ||||| |||||||| |||||||||||||  |||||||||||| ||||||||||||||||||||||| ||||    
T  52359810 caatactatcagactgacatatcatataacatattaagtaatattcatgtaaaaaagacacaaatcatcagaaaatgaaatatgtgatcggtatgcatag 52359711  T
Q  103 aggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaataca 202  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  52359710 aggaacacttgttgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccacaaatcatcccattattgtcactttaaaaaataca 52359611  T
Q  203 catttttccccattt 217  Q
    |||||||||||||||    
T  52359610 catttttccccattt 52359596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 26 - 239
Target Start/End: Original strand, 36304653 - 36304865
Alignment:
Q  26 atatagcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtatagaggaacacttattgagaaatgtc 125  Q
    ||||||||||| |||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  36304653 atatagcatattaagtaatattcatgtaaaaaagacacaaatcatcagcaaatgaaatatgtgatcggtatgtatagaggaacacttattgagaaatggc 36304752  T
Q  126 aaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcat 225  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||| ||||||| ||||| |    
T  36304753 aaacacttagacatatatttctttacctttgaaattaatccacaaatcatcccattattgtcactttaaaaaatacaaattttt-cccattttgaagcct 36304851  T
Q  226 attttgatgtatat 239  Q
    ||||||||||||||    
T  36304852 attttgatgtatat 36304865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 3 - 239
Target Start/End: Original strand, 49203803 - 49204041
Alignment:
Q  3 caataatatcaaactgacatatcatatag--catatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtat 100  Q
    ||||| ||||| || |||||||||||||   ||||| |||||||| |||||||||||||  |||||||||||||| ||||||||||||||||||||||||    
T  49203803 caatactatcagaccgacatatcatatataacatattaagtaatattcatgtaaaaaagacacaaatcatcagcagatgaaatatgtgatcggtatgtat 49203902  T
Q  101 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaata 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||| |||||||||||    
T  49203903 agaggatcacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattattccacaaatcatcccattactgtcactttaaaaaata 49204002  T
Q  201 cacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||||||||||| ||||| |||||||||||||||    
T  49204003 cacatttttccccattttgaagcctattttgatgtatat 49204041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 3 - 239
Target Start/End: Original strand, 30753553 - 30753793
Alignment:
Q  3 caataatatcaaactgacatatcatat--agcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtat 100  Q
    ||||| ||||| || ||||||||||||  ||||||| |||||||| |||||||||||||  ||||||||||| ||||||||||||| |||||||||||||    
T  30753553 caatactatcagaccgacatatcatatatagcatattaagtaatattcatgtaaaaaagacacaaatcatcaacaaatgaaatatgcgatcggtatgtat 30753652  T
Q  101 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaattt--aaaaaa 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||| |||  ||||||    
T  30753653 agaggaacacttattgagaaatgtcaaacacttagacatatatttatttacctttgaaattaattcacaaatcatcccattattgtcactttaaaaaaaa 30753752  T
Q  199 tacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||||||||||||| ||||| |||||||||||||||    
T  30753753 tacacatttttccccattttgaagcctattttgatgtatat 30753793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 3 - 217
Target Start/End: Original strand, 31675999 - 31676214
Alignment:
Q  3 caataatatcaaactgacatatcatat--agcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtat 100  Q
    ||||| |||||||| ||||||||||||  ||||||| |||||||| |||||||||||||  |||||||| ||||||||||||||||||||||||||||||    
T  31675999 caatactatcaaaccgacatatcatatatagcatattaagtaatattcatgtaaaaaagacacaaatcaccagcaaatgaaatatgtgatcggtatgtat 31676098  T
Q  101 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaata 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||    
T  31676099 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccacaaatcatcccattattgtcacttt-aaaaata 31676197  T
Q  201 cacatttttccccattt 217  Q
    |||||||||||| ||||    
T  31676198 cacatttttccctattt 31676214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 3 - 214
Target Start/End: Original strand, 4213569 - 4213782
Alignment:
Q  3 caataatatcaaactgacatatcatat--agcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtat 100  Q
    ||||| ||||| || ||||||||||||  ||||||| |||||||| ||| |||||||||  | |||||||||||||||||||||||||||||||||||||    
T  4213569 caatactatcagaccgacatatcatatatagcatattaagtaatattcacgtaaaaaagacataaatcatcagcaaatgaaatatgtgatcggtatgtat 4213668  T
Q  101 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaata 200  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||    
T  4213669 agaggaacacttattgaaaaatgtcaaacacttagacatatatttctttacctttgaaattaatccacaaatcattccattattgtcactttaaaaaata 4213768  T
Q  201 cacatttttcccca 214  Q
    |||||||| |||||    
T  4213769 cacattttccccca 4213782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 3 - 239
Target Start/End: Complemental strand, 13150017 - 13149790
Alignment:
Q  3 caataatatcaaactgacatatcatata--gcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtat 100  Q
    ||||| ||||| ||||||||||||||||  |||||| |||||||| |||||||||||||  |||         |||||||||||||||||||||||||||    
T  13150017 caatactatcagactgacatatcatatatagcatattaagtaatattcatgtaaaaaag--aca---------caaatgaaatatgtgatcggtatgtat 13149929  T
Q  101 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaata 200  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  13149928 aaaggaacacttattgagaaatgtcaaacacttagacatatatttcttttcctttgaaattaatccacaaatcatcccattattgtcactttaaaaaata 13149829  T
Q  201 cacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||||||||||| ||||| |||||||||||||||    
T  13149828 cacatttttccccattttgaagcttattttgatgtatat 13149790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 3 - 217
Target Start/End: Complemental strand, 29357876 - 29357661
Alignment:
Q  3 caataatatcaaactgacatatcatata--gcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtat 100  Q
    ||||| ||||| || |||||||||||||  |||||| |||||||| |||||||||||||  |||||||| ||||||||||||||||||||||||||||||    
T  29357876 caatactatcagaccgacatatcatatatagcatattaagtaatattcatgtaaaaaagacacaaatcaccagcaaatgaaatatgtgatcggtatgtat 29357777  T
Q  101 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaata 200  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||| ||| |||||||    
T  29357776 agaggaatacttattgagaaatgtcaaacacttagacatatatttctttacctttgaatttaatccacaaatcatctcattattgtcacttt-aaaaata 29357678  T
Q  201 cacatttttccccattt 217  Q
    |||||||||||| ||||    
T  29357677 cacatttttccctattt 29357661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 33 - 239
Target Start/End: Original strand, 44397111 - 44397315
Alignment:
Q  33 atatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtatagaggaacacttattgagaaatgtcaaacact 132  Q
    |||| |||||||| |||| ||||||||  | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  44397111 atattaagtaatattcatataaaaaagacataaatcatcagcaaatgaaatatgtgatcggtatgtatagagaaacacttattgagaaatgtcaaacact 44397210  T
Q  133 tagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttga 232  Q
    |||||||||||||||||| |||||||||||||||| |||||||| ||||||||||| ||||||||||||||  |||| ||||||| ||||| ||||||||    
T  44397211 tagacatatatttctttaactttgaaattaatccacaaatcatcacattattgtcactttaaaaaatacac--tttttcccattttgaagcctattttga 44397308  T
Q  233 tgtatat 239  Q
    |||||||    
T  44397309 tgtatat 44397315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 26 - 239
Target Start/End: Original strand, 51000618 - 51000830
Alignment:
Q  26 atatagcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtatagaggaacacttattgagaaatgtc 125  Q
    ||||||||||| |||||||| ||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  51000618 atatagcatattaagtaatattcatgtaaaaa-gacacaaatcatcagcaaatgaaatatgtgatcggtatgtatagaggaatacttattgagaaatgtc 51000716  T
Q  126 aaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcat 225  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||| ||| |||||||| || ||||||||||||| | |||||||||||| ||||| |    
T  51000717 aaacacttacacatatatttctttacctttgaaattaatccacaaattatctcattattgccactttaaaaaatacata-ttttccccattttgaagcct 51000815  T
Q  226 a-ttttgatgtatat 239  Q
    | |||||||||||||    
T  51000816 atttttgatgtatat 51000830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 13242713 - 13242793
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| | ||| |||||||||||||||    
T  13242713 attaatccacaaatcatcccattattgtcactttaaaaaatacacatttttccccattttggagcctattttgatgtatat 13242793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 37613207 - 37613127
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| | ||| |||||||||||||||    
T  37613207 attaatccacaaatcatcccattattgtcactttaaaaaatacacatttttccccattttggagcctattttgatgtatat 37613127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 42246657 - 42246737
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| ||||| |||||||||||||||    
T  42246657 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttgaagcctattttgatgtatat 42246737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 4469957 - 4470037
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  4469957 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 4470037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 11992363 - 11992283
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  11992363 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 11992283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 13264966 - 13264886
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||  |||| |||||||||||||||    
T  13264966 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttcaagcctattttgatgtatat 13264886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 18054067 - 18053987
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  18054067 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 18053987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 20899016 - 20899096
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  20899016 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 20899096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 25227782 - 25227702
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  25227782 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 25227702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 25859337 - 25859417
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    |||||||||||||||||| ||||||||||| ||| ||||||||| |||||||||||||| ||||| |||||||||||||||    
T  25859337 attaatccataaatcatctcattattgtcacttttaaaaatacatatttttccccattttgaagcctattttgatgtatat 25859417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 29329790 - 29329870
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  29329790 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 29329870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 31435005 - 31434925
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  31435005 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 31434925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 35894567 - 35894647
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  35894567 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 35894647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 37275961 - 37275881
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  37275961 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 37275881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 37812731 - 37812651
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  37812731 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 37812651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 42148873 - 42148953
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||| | ||| |||||||||||||||    
T  42148873 attaatccacaaatcatcccattattatcactttaaaaaatacacatttttccccattttggagcctattttgatgtatat 42148953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 46804138 - 46804058
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    |||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  46804138 attaatccataaatcatctcattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 46804058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 47433893 - 47433813
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  47433893 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 47433813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 23742170 - 23742091
Alignment:
Q  160 ttaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    |||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  23742170 ttaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 23742091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 31196524 - 31196606
Alignment:
Q  157 aaattaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||||| |||||||| ||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  31196524 aaattaatccacaaatcatctcattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 31196606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 10387213 - 10387133
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  10387213 attaatccacaaatcatctcattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 10387133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 29674794 - 29674874
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| ||||||||||||||||| || ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  29674794 attaatccacaaatcatcccattattgccactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 29674874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 31435237 - 31435317
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  31435237 attaatccacaaatcatctcattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 31435317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 32832029 - 32831949
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||  |||||||||||||||    
T  32832029 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagtctattttgatgtatat 32831949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 1023806 - 1023726
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||| ||||||||| |||| | ||| |||||||||||||||    
T  1023806 attaatccacaaatcatctcattattgtcactttaaaaaatacatatttttccctattttggagcctattttgatgtatat 1023726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 7436920 - 7436841
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||| ||||||||| |||||||||||||| | ||| |||||||||||||||    
T  7436920 attaatccacaaatcatcccattattgtcacttt-aaaaatacatatttttccccattttggagcctattttgatgtatat 7436841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 20358373 - 20358453
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||| |||||||   ||| |||||||||||||||    
T  20358373 attaatccacaaatcatcccattattgtcactttaaaaaatacatattttttcccatttttgagcctattttgatgtatat 20358453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 20552598 - 20552518
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||| |||||||   ||| |||||||||||||||    
T  20552598 attaatccacaaatcatcccattattgtcactttaaaaaatacatattttttcccatttttgagcctattttgatgtatat 20552518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 20561582 - 20561502
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||| |||||||   ||| |||||||||||||||    
T  20561582 attaatccacaaatcatcccattattgtcactttaaaaaatacatattttttcccatttttgagcctattttgatgtatat 20561502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 22775775 - 22775695
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| ||||||| |||||||||||| ||||||||||||| ||||| |||||||| | |||||||||| ||||||||    
T  22775775 attaatccacaaatcattccattattgtcactttaaaaaatacatattttcccccattttggagcatatttttatgtatat 22775695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 37587501 - 37587581
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||| |||||||| ||||| | ||| |||||||||||||||    
T  37587501 attaatccacaaatcatcacattattgtcactttaaaaaatacatatttttcctcattttggagcctattttgatgtatat 37587581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 38456950 - 38456870
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| | ||| |||||||| | ||| |||||||||||||||    
T  38456950 attaatccacaaatcatcccattattgtcactttaaaaaatacataatttcccccattttggagcctattttgatgtatat 38456870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 38833882 - 38833803
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||| ||||||| | ||| |||||||||||||||    
T  38833882 attaatccacaaatcatcccattattgtcactttaaaaaatacatattttt-cccattttggagcctattttgatgtatat 38833803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 45508387 - 45508467
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| ||||| ||||||||   ||| |||||||||||||||    
T  45508387 attaatccacaaatcatcccattattgtcactttaaaaaatacatattttcccccattttagagcctattttgatgtatat 45508467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 8383855 - 8383935
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||  ||| ||||||||| |||||| ||||||| | ||| |||||||||||||||    
T  8383855 attaatccacaaatcatcccattattgtcgctttcaaaaatacatattttttcccattttggagcctattttgatgtatat 8383935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 17273290 - 17273211
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||| ||||||||| ||||||||||||||   ||| |||||||||||||||    
T  17273290 attaatccacaaatcatcccattattgtcacttt-aaaaatacatatttttccccattttagagcctattttgatgtatat 17273211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 4632016 - 4631946
Alignment:
Q  161 taatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttg 231  Q
    ||||||| |||||||||||||||||| | ||| ||||||||| |||||||||||||| | ||| |||||||    
T  4632016 taatccacaaatcatcccattattgttactttgaaaaatacatatttttccccattttggagcctattttg 4631946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 195
Target Start/End: Complemental strand, 38617553 - 38617517
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaa 195  Q
    |||||||||||||||||||||||||||||| ||||||    
T  38617553 attaatccataaatcatcccattattgtcactttaaa 38617517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 172; Significance: 1e-92; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 3 - 239
Target Start/End: Complemental strand, 11455953 - 11455715
Alignment:
Q  3 caataatatcaaactgacatatcatata--gcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtat 100  Q
    ||||| ||||| || |||||||||||||  |||||| |||||||| |||||||||||||  |||||||||||||||||||||||||||||| || |||||    
T  11455953 caatactatcagaccgacatatcatatatagcatattaagtaatattcatgtaaaaaagacacaaatcatcagcaaatgaaatatgtgatcagtctgtat 11455854  T
Q  101 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaata 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  11455853 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccacaaatcatcccattattgtcactttaaaaaata 11455754  T
Q  201 cacatttttccccatttcgaagcatattttgatgtatat 239  Q
    |||||||| |||||||| ||||| |||||||||||||||    
T  11455753 cacattttcccccattttgaagcctattttgatgtatat 11455715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 3 - 239
Target Start/End: Original strand, 34994256 - 34994494
Alignment:
Q  3 caataatatcaaactgacatatcatat--agcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtat 100  Q
    ||||| ||||| || ||||||||||||  ||||||| |||||||| |||||||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  34994256 caatactatcagaccgacatatcatatatagcatattaagtaatattcatgtaaaaaagacacaaatcatcagcaaatgaaatatgtgattggtatgtat 34994355  T
Q  101 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaata 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||  ||||||||||    
T  34994356 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccacaaatcatcacattattgtcacattaaaaaata 34994455  T
Q  201 cacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| || |||| ||||| |||||||||||||||    
T  34994456 cacattttttcctattttgaagcctattttgatgtatat 34994494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 3 - 239
Target Start/End: Complemental strand, 40245596 - 40245359
Alignment:
Q  3 caataatatcaaactgacatatcatata--gcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtat 100  Q
    ||||| |||||||| |||||||||||||  || ||| |||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  40245596 caatactatcaaaccgacatatcatatatagc-tattaagtaatattcatgtaaaaaagacacaaatcatcagcaaatgaaatatgtgatcggtatgtat 40245498  T
Q  101 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaata 200  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||    
T  40245497 agaggaacacttattgataaatgtcaaacacttagacatatatttctttacctttgaaatcaatccacaaatcatcccattattgtcactttaaaaaata 40245398  T
Q  201 cacatttttccccatttcgaagcatattttgatgtatat 239  Q
     |||||| |  |||||| ||||| |||||||||||||||    
T  40245397 tacatttatttccattttgaagcctattttgatgtatat 40245359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 3 - 239
Target Start/End: Complemental strand, 6804411 - 6804173
Alignment:
Q  3 caataatatcaaactgacatatcatatag--catatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtat 100  Q
    ||||| ||||| || |||||||||||||   ||||| |||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  6804411 caatactatcagaccgacatatcatatataacatattaagtaatattcatgtaaaaaagacacaaatcatcagcaaatgaaatatgtgatcggtatgtat 6804312  T
Q  101 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaata 200  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  6804311 agaggaacacttattgggaaatgtcaaacacttatacatatatttctttacctttgaaattaatccacaaatcatcccattattgtcactttaaaaaata 6804212  T
Q  201 cacatttttccccatttcgaagcatattttgatgtatat 239  Q
    || |||||||| |||||   ||  |||||||||||||||    
T  6804211 catatttttcctcattttagagtctattttgatgtatat 6804173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 3 - 239
Target Start/End: Complemental strand, 7462440 - 7462202
Alignment:
Q  3 caataatatcaaactgacatatcatata--gcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtat 100  Q
    ||||| ||||| || |||||||||||||  |||||| |||||||| |||||||||||||  | ||||||||||||||||||||||||||||   ||||||    
T  7462440 caatactatcagaccgacatatcatatatagcatattaagtaatattcatgtaaaaaagacataaatcatcagcaaatgaaatatgtgatcaacatgtat 7462341  T
Q  101 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaata 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||    
T  7462340 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccacaaatcatctcattattgtcactttaaaaaata 7462241  T
Q  201 cacatttttccccatttcgaagcatattttgatgtatat 239  Q
    || |||||||| ||||| | ||| |||||||||||||||    
T  7462240 catatttttccacattttggagcctattttgatgtatat 7462202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 4 - 217
Target Start/End: Complemental strand, 43775047 - 43774831
Alignment:
Q  4 aataatatcaaactgacatatcatata--gcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtata 101  Q
    |||| ||||| || |||||||||||||  |||||| |||||||| |||||||||||||  ||||||||||| ||||||||||||||||||| ||||||||    
T  43775047 aatactatcagaccgacatatcatatatagcatattaagtaatattcatgtaaaaaagacacaaatcatcaacaaatgaaatatgtgatcgatatgtata 43774948  T
Q  102 gaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaattt-aaaaaata 200  Q
    || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||    
T  43774947 gatgaacacttattgagaaatgtcaaacacctagacatatatttctttacctttgaaattaatccacaaatcatcccattattgtcactttaaaaaaata 43774848  T
Q  201 cacatttttccccattt 217  Q
    |||||||||||||||||    
T  43774847 cacatttttccccattt 43774831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 26 - 239
Target Start/End: Original strand, 48936794 - 48937006
Alignment:
Q  26 atatagcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtatagaggaacacttattgagaaatgtc 125  Q
    ||||||||||| |||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  48936794 atatagcatattaagtaatattcatgtaaaaaagaaacaaatcatcagcaaatgaaatatgtgatcggtatgtataaaggaacacttattgagaaatgtc 48936893  T
Q  126 aaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcat 225  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||| ||| |||| | | |||||||||||||| |||||||| ||||  |||  |    
T  48936894 aaacacttagacatatatttttttacctttgaaattaatccacaaatcat-ccaatattatgactttaaaaaatacacttttttccctattttaaagtct 48936992  T
Q  226 attttgatgtatat 239  Q
    ||||||||||||||    
T  48936993 attttgatgtatat 48937006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 3 - 239
Target Start/End: Complemental strand, 43671127 - 43670888
Alignment:
Q  3 caataatatcaaactgacatatcatata--gcatatcaagtaatactcatgtaaaaaaggtaca--aatcatcagcaaatgaaatatgtgatcggtatgt 98  Q
    ||||| ||||| ||||||||||||||||  |||||| || ||||| | ||||||||||   |||  |||||| |||||||||||||||||||||||||||    
T  43671127 caatattatcagactgacatatcatatatagcatattaaataatatttatgtaaaaaaaaaacacaaatcattagcaaatgaaatatgtgatcggtatgt 43671028  T
Q  99 atagaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaa 198  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||    
T  43671027 atagaggaacacttattgaaaaatgtcaaacacttagacatatatttctttacctttgaaattaatccacaaatcatctcattattgtcactttaaaaaa 43670928  T
Q  199 tacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    |||||| ||| ||||||||  |||  |||||||||||||||    
T  43670927 tacaca-tttcccccattttaaagtttattttgatgtatat 43670888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 46229826 - 46229746
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| ||||| |||||||||||||||    
T  46229826 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttgaagcctattttgatgtatat 46229746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 3628312 - 3628232
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  3628312 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 3628232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 17272284 - 17272364
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  17272284 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 17272364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 24466676 - 24466596
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  24466676 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 24466596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 26931662 - 26931582
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  26931662 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 26931582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 34962869 - 34962949
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||  |||| |||||||||||||||    
T  34962869 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccatttttaagcctattttgatgtatat 34962949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 37007555 - 37007635
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||| | |||||||||||||||||||| ||||||||||||| |||||||||||||| ||||| |||||||||||||||    
T  37007555 attaatcaacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttgaagcctattttgatgtatat 37007635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 38354347 - 38354267
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  38354347 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcttattttgatgtatat 38354267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 39403282 - 39403362
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  39403282 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 39403362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 41080638 - 41080558
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  41080638 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 41080558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 44335647 - 44335727
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  44335647 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 44335727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 46100627 - 46100707
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  46100627 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 46100707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 7337654 - 7337734
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||| ||||||| | ||| |||||||||||||||    
T  7337654 attaatccacaaatcatcccattattgtcactttaaaaaatacatattttttcccattttggagcctattttgatgtatat 7337734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 24182252 - 24182172
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| |||||||| |||| |||||||||||||| | ||| |||||||||||||||    
T  24182252 attaatccacaaatcatcccattattgtcactttaaaaagtacatatttttccccattttggagcctattttgatgtatat 24182172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 30890589 - 30890509
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| ||||||||| |||| | ||| |||||||||||||||    
T  30890589 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccctattttggagcctattttgatgtatat 30890509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 35004564 - 35004484
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||| ||||||| | ||| |||||||||||||||    
T  35004564 attaatccacaaatcatcccattattgtcactttaaaaaatacatattttttcccattttggagcctattttgatgtatat 35004484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 35788530 - 35788450
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||| ||||| | ||| |||||||||||||||    
T  35788530 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccgcattttggagcctattttgatgtatat 35788450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 38171396 - 38171476
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||| | |||||||||||||| | ||| |||||||||||||||    
T  38171396 attaatccacaaatcatcccattattgtcactttaaaaaatatatatttttccccattttggagcctattttgatgtatat 38171476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 40340805 - 40340725
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| || |||||||||| |||||||||||||| | ||| |||||||||||||||    
T  40340805 attaatccacaaatcatcccattattgtcacttaaaaaaatacatatttttccccattttggagcctattttgatgtatat 40340725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 40668301 - 40668221
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| ||||| |||||||| | ||| |||||||||||||||    
T  40668301 attaatccacaaatcatcccattattgtcactttaaaaaatacatattttcccccattttggagcctattttgatgtatat 40668221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 42028829 - 42028749
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||| ||||||| | ||| |||||||||||||||    
T  42028829 attaatccacaaatcatcccattattgtcactttaaaaaatacatattttttcccattttggagcctattttgatgtatat 42028749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 18031450 - 18031530
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||| ||||||| | | | |||||||||||||||    
T  18031450 attaatccacaaatcatcccattattgtcactttaaaaaatacatattttttcccattttggaacctattttgatgtatat 18031530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 18120624 - 18120544
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||| ||||||| | ||  |||||||||||||||    
T  18120624 attaatccacaaatcatcccattattgtcactttaaaaaatacatattttttcccattttggagtctattttgatgtatat 18120544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 21176334 - 21176254
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||| ||||||| | ||| || ||||||||||||    
T  21176334 attaatccacaaatcatcccattattgtcactttaaaaaatacatattttttcccattttggagcctagtttgatgtatat 21176254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 44744635 - 44744555
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||  ||||||||    
T  44744635 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctatttgaatgtatat 44744555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 44781689 - 44781769
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||| | |||||||||||||| | ||| |||||||||| ||||    
T  44781689 attaatccacaaatcatcccattattgtcactttaaaaaataaatatttttccccattttggagcctattttgatgcatat 44781769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 47170565 - 47170485
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||| | |||||||| ||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  47170565 attaatctacaaatcatctcattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 47170485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 36787004 - 36786934
Alignment:
Q  169 aaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    |||||||||||||||||||| ||||||||||||| |||||| ||||||| | ||| |||||||||||||||    
T  36787004 aaatcatcccattattgtcactttaaaaaatacatattttttcccattttggagcctattttgatgtatat 36786934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 46330186 - 46330244
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccattt 217  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  46330186 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattt 46330244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 8641400 - 8641480
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| ||||||||| |||||||||| ||||||||||||| |||||| |||||||   ||| |||||||||||||||    
T  8641400 attaatccacaaatcatcctattattgtcactttaaaaaatacatattttttcccatttttgagcctattttgatgtatat 8641480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 41641981 - 41642061
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| ||||||||  |||||||||| ||||||||||||| ||||||| |||||| | ||| |||||||||||||||    
T  41641981 attaatccacaaatcatcttattattgtcactttaaaaaatacatatttttcaccattttggagcctattttgatgtatat 41642061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 45155412 - 45155492
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    |||||| || |||||||||||||||||||| ||||||||||||| ||||||| ||||||   ||| |||||||||||||||    
T  45155412 attaattcacaaatcatcccattattgtcactttaaaaaatacatatttttctccatttttgagcctattttgatgtatat 45155492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 24646628 - 24646686
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccattt 217  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| ||||||| ||||||    
T  24646628 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttctccattt 24646686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 26303785 - 26303839
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttcccc 213  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||    
T  26303785 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttcccc 26303839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 28290508 - 28290566
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccattt 217  Q
    ||||||||| ||||||||| |||||||||| ||||||||||||| |||||| |||||||    
T  28290508 attaatccacaaatcatccgattattgtcactttaaaaaatacatattttttcccattt 28290566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Complemental strand, 41409190 - 41409147
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaataca 202  Q
    ||||||||| |||||||||||||||||||| |||||||||||||    
T  41409190 attaatccacaaatcatcccattattgtcactttaaaaaataca 41409147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 212
Target Start/End: Original strand, 22599185 - 22599220
Alignment:
Q  177 ccattattgtcaatttaaaaaatacacatttttccc 212  Q
    |||||||||||| |||||||||||||||||||||||    
T  22599185 ccattattgtcactttaaaaaatacacatttttccc 22599220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 239
Target Start/End: Complemental strand, 19488923 - 19488877
Alignment:
Q  193 aaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    |||||||||| |||||||||||||| | ||| |||||||||||||||    
T  19488923 aaaaaatacatatttttccccattttggagcctattttgatgtatat 19488877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 164; Significance: 9e-88; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 3 - 239
Target Start/End: Original strand, 7778083 - 7778320
Alignment:
Q  3 caataatatcaaactgacatatcatatag--catatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtat 100  Q
    ||||| ||||| || |||||||||||||   ||||| |||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  7778083 caatactatcagaccgacatatcatatataacatattaagtaatattcatgtaaaaaagacacaaatcatcagcaaatgaaatatgtgatcggtatgtat 7778182  T
Q  101 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaata 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||| |||||||||||    
T  7778183 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaatt-atccacaaatcatcccattattatcactttaaaaaata 7778281  T
Q  201 cacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||||||||||| ||||  |||||||||||||||    
T  7778282 cacatttttccccattttgaagtctattttgatgtatat 7778320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 3 - 239
Target Start/End: Original strand, 2695425 - 2695662
Alignment:
Q  3 caataatatcaaactgacatatcatat--agcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtat 100  Q
    ||||| ||||| || ||||||||||||  ||||||| |||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  2695425 caatattatcagaccgacatatcatatatagcatattaagtaatattcatgtaaaaaagacacaaatcatcagcaaatgaaatatgtgatcggtatgtat 2695524  T
Q  101 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaata 200  Q
    |||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||    
T  2695525 agagaaacacttattgagaaatgtcaaacagttaga-atatatttctttacctttgaaattaatccacaaatcatctcattattgtcactttaaaaaata 2695623  T
Q  201 cacatttttccccatttcgaagcatattttgatgtatat 239  Q
    || ||||| |||||||| ||||| |||||||||||||||    
T  2695624 catattttcccccattttgaagcctattttgatgtatat 2695662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 12178305 - 12178225
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  12178305 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 12178225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 19223240 - 19223160
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  19223240 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 19223160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 26367705 - 26367625
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  26367705 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 26367625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 37224832 - 37224752
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  37224832 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 37224752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 40651252 - 40651332
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  40651252 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 40651332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 16057771 - 16057851
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  16057771 attaatccacaaatcatctcattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 16057851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 25992360 - 25992440
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  25992360 attaatccacaaatcatctcattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 25992440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 28243116 - 28243196
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| ||||| |||||||| | ||| |||||||||||||||    
T  28243116 attaatccacaaatcatcccattattgtcactttaaaaaatacatattttcccccattttggagcctattttgatgtatat 28243196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 33437594 - 33437514
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||   ||| |||||||||||||||    
T  33437594 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccatttttgagcctattttgatgtatat 33437514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 41799575 - 41799495
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| ||||||||| |||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  41799575 attaatccacaaatcatccaattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 41799495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 121855 - 121775
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||| |||||| ||||||| | ||| |||||||||||||||    
T  121855 attaatccacaaatcatctcattattgtcactttaaaaaatacatattttttcccattttggagcctattttgatgtatat 121775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 6166558 - 6166478
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| |||||||||| || |||||||||||||| | ||  |||||||||||||||    
T  6166558 attaatccacaaatcatcccattattgtcactttaaaaaatgcatatttttccccattttggagtctattttgatgtatat 6166478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 32892474 - 32892394
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||| |||||||||||||| | ||  |||||||||||||||    
T  32892474 attaatccacaaatcatctcattattgtcactttaaaaaatacatatttttccccattttggagtctattttgatgtatat 32892394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 42793512 - 42793592
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| ||||||| ||||||   ||| |||||||||||||||    
T  42793512 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttctccatttttgagcctattttgatgtatat 42793592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 1550461 - 1550532
Alignment:
Q  168 taaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||||||||||||||| ||||||||||||| |||||| ||||||| | ||| |||||||||||||||    
T  1550461 taaatcatcccattattgtcactttaaaaaatacatattttttcccattttggagcctattttgatgtatat 1550532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 3074709 - 3074789
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||  |||||||   ||| |||||||||||||||    
T  3074709 attaatccacaaatcatcccattattgtcactttaaaaaatacatattttctcccattttagagcctattttgatgtatat 3074789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 4357073 - 4356998
Alignment:
Q  163 atccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||| |||||||||||||||||||| ||||||||||||| | |||||||||||| | ||| |||||||||||||||    
T  4357073 atccacaaatcatcccattattgtcactttaaaaaatacata-ttttccccattttggagcctattttgatgtatat 4356998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 8346262 - 8346342
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||| ||||||||  |||| | ||| |||||||||||||||    
T  8346262 attaatccacaaatcatctcattattgtcactttaaaaaatacatatttttccatattttggagcctattttgatgtatat 8346342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 44258361 - 44258281
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||||||||||||| |||||||||| || |||||||||| ||||| | |||||| | ||| |||||||||||||||    
T  44258361 attaatccataaatcatcctattattgtcacttaaaaaaatacatattttcctccattttggagcctattttgatgtatat 44258281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 3434821 - 3434771
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacattttt 209  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| ||||||    
T  3434821 attaatccacaaatcatcccattattgtcactttaaaaaatacatattttt 3434771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 25775298 - 25775348
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacattttt 209  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| ||||||    
T  25775298 attaatccacaaatcatcccattattgtcactttaaaaaatacatattttt 25775348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 44747685 - 44747719
Alignment:
Q  178 cattattgtcaatttaaaaaatacacatttttccc 212  Q
    ||||||||||| |||||||||||||||||||||||    
T  44747685 cattattgtcactttaaaaaatacacatttttccc 44747719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 161; Significance: 5e-86; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 18 - 239
Target Start/End: Original strand, 6864960 - 6865182
Alignment:
Q  18 gacatatcata--tagcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtatagaggaacacttatt 115  Q
    |||||||||||  |||||||| |||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  6864960 gacatatcatacatagcatattaagtaatattcatgtaaaaaagacacaaatcatcagcaaatgaaatatgtgatcggtatgtataaaggaacacttatt 6865059  T
Q  116 gagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccat 215  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||  |||||||||||    
T  6865060 gaaaaatgtcaaacacttagacatatatttctttacctttgaaattaatccacaaatcatcccattattgtcactttaaaaaataca-ttttttccccat 6865158  T
Q  216 ttcgaagcatattttgatgtatat 239  Q
    || ||||| |||||||||||||||    
T  6865159 tttgaagcctattttgatgtatat 6865182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 3 - 239
Target Start/End: Original strand, 4104538 - 4104774
Alignment:
Q  3 caataatatcaaactgacatatcatat--agcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtat 100  Q
    ||||| ||||| || ||||||||||||  ||||||| |||||||| |||||||||||||  |||| ||||||||||||||||||||||||||||||||||    
T  4104538 caatactatcagaccgacatatcatatatagcatattaagtaatattcatgtaaaaaagacacaagtcatcagcaaatgaaatatgtgatcggtatgtat 4104637  T
Q  101 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaata 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||| |    
T  4104638 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccacaaatcatctcattattgtcactttaaaaaa-a 4104736  T
Q  201 cacatttttccccatttcgaagcatattttgatgtatat 239  Q
    || | |||||||||||| ||||| |||||||||||||||    
T  4104737 cata-ttttccccattttgaagcctattttgatgtatat 4104774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 3 - 238
Target Start/End: Complemental strand, 7978964 - 7978729
Alignment:
Q  3 caataatatcaaactgacatatcatata--gcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtat 100  Q
    ||||| ||||| || |||||||||||||  |||||| || ||||| |||||||||| |   ||||||||||| |||||||||||||||||||||||||||    
T  7978964 caatactatcagaccgacatatcatatatagcatattaattaatattcatgtaaaagac--acaaatcatcatcaaatgaaatatgtgatcggtatgtat 7978867  T
Q  101 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaata 200  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||    
T  7978866 agagaaacacttatcgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatcatctcattattttcactttaaaaaata 7978767  T
Q  201 cacatttttccccatttcgaagcatattttgatgtata 238  Q
    || ||||| |||||||| ||||| ||||||||||||||    
T  7978766 catattttcccccattttgaagcctattttgatgtata 7978729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 4152800 - 4152720
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  4152800 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 4152720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 17526433 - 17526353
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  17526433 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 17526353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 21640403 - 21640483
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  21640403 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 21640483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 25338627 - 25338707
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  25338627 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 25338707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 25482346 - 25482426
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  25482346 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 25482426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 38395876 - 38395956
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  38395876 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 38395956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 40315243 - 40315163
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  40315243 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 40315163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 41412296 - 41412376
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  41412296 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 41412376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 459971 - 460051
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| ||||||| |||||| | ||| |||||||||||||||    
T  459971 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttctccattttggagcctattttgatgtatat 460051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 1829776 - 1829696
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| ||||||| |||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  1829776 attaatccacaaatcattccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 1829696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 8160312 - 8160232
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||| ||||||| | ||| |||||||||||||||    
T  8160312 attaatccacaaatcatcccattattgtcactttaaaaaatacatattttttcccattttggagcctattttgatgtatat 8160232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 9772732 - 9772812
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  9772732 attaatccacaaatcatcacattattgtcattttaaaaaatacatatttttccccattttggagcctattttgatgtatat 9772812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 29373718 - 29373798
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||| ||||| |||||||| | |||||||||||||||||||    
T  29373718 attaatccacaaatcatctcattattgtcactttaaaaaatacatattttcccccattttggagcatattttgatgtatat 29373798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 32272860 - 32272940
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||| ||||||| | ||| |||||||||||||||    
T  32272860 attaatccacaaatcatcccattattgtcactttaaaaaatacatattttttcccattttggagcctattttgatgtatat 32272940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 38143768 - 38143848
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| |||||| |||||| |||||||||||||| | ||| |||||||||||||||    
T  38143768 attaatccacaaatcatcccattattgtcactttaaacaatacatatttttccccattttggagcctattttgatgtatat 38143848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 38483421 - 38483501
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| ||||||||| |||||    
T  38483421 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatctatat 38483501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 39760945 - 39760865
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| ||||| |||||||| | ||| |||||||||||||||    
T  39760945 attaatccacaaatcatcccattattgtcactttaaaaaatacatattttcccccattttggagcctattttgatgtatat 39760865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 2061083 - 2061164
Alignment:
Q  159 attaatccataaatcatcccattattgtcaattt-aaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||| |||||||||||||| | ||| |||||||||||||||    
T  2061083 attaatccacaaatcatcccattattgtcactttaaaaaaatacatatttttccccattttggagcctattttgatgtatat 2061164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 236
Target Start/End: Complemental strand, 4912167 - 4912090
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgta 236  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||   ||| ||||||||||||    
T  4912167 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccatttttgagcctattttgatgta 4912090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 19289619 - 19289700
Alignment:
Q  159 attaatccataaatcatcccattattgtcaattt-aaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||| |||||||||||||| | ||| |||||||||||||||    
T  19289619 attaatccacaaatcatcccattattgtcactttaaaaaaatacatatttttccccattttggagcctattttgatgtatat 19289700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 3508427 - 3508347
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||| | | |||||||||||| | ||| |||||||||||||||    
T  3508427 attaatccacaaatcatcccattattgtcactttaaaaaatatataattttccccattttggagcctattttgatgtatat 3508347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 4844037 - 4843957
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||| ||||||||||| ||||||||||| | |||||||||||||| | ||| |||||||||||||||    
T  4844037 attaatccacaaatcatctcattattgtcactttaaaaaatatatatttttccccattttggagcttattttgatgtatat 4843957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 6680867 - 6680787
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||| ||||| ||||||||||||| ||||||||| |||| | ||| |||||||||||||||    
T  6680867 attaatccacaaatcatcccattactgtcactttaaaaaatacatatttttccctattttggagcctattttgatgtatat 6680787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 6845444 - 6845524
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||| | ||||||||||||| |||||| ||||||| | ||| |||||||||||||||    
T  6845444 attaatccacaaatcatcccattattgttactttaaaaaatacatattttttcccattttggagcctattttgatgtatat 6845524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 12366863 - 12366784
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||| ||||||||| |||||||||||||| | ||| |||||||||||||||    
T  12366863 attaatccacaaatcatcccattattgtcacttt-aaaaatacatatttttccccattttggagcctattttgatgtatat 12366784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 12404061 - 12404141
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||   ||  |||||||||||||||    
T  12404061 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccatttttgagtctattttgatgtatat 12404141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 12736652 - 12736572
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| ||||||||  |||| | ||| |||||||||||||||    
T  12736652 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccatattttggagcctattttgatgtatat 12736572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 26395765 - 26395685
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||| || |||| | ||| |||||||||||||||    
T  26395765 attaatccacaaatcatcccattattgtcactttaaaaaatacatattttttcctattttggagcctattttgatgtatat 26395685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 36811186 - 36811106
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| |||||||||||||  ||||| ||||||| | ||| |||||||||||||||    
T  36811186 attaatccacaaatcatcccattattgtcactttaaaaaatacattttttttcccattttggagcctattttgatgtatat 36811106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 40195721 - 40195801
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| | |||||||||||||||||| ||||||||||||| |||||||||||||| | ||  |||||||||||||||    
T  40195721 attaatccacatatcatcccattattgtcactttaaaaaatacatatttttccccattttggagtctattttgatgtatat 40195801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 42438293 - 42438372
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| | |||||||||||| | ||| |||||||||||||||    
T  42438293 attaatccacaaatcatcccattattgtcactttaaaaaatacata-ttttccccattttggagcctattttgatgtatat 42438372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 12799475 - 12799396
Alignment:
Q  160 ttaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    |||||||| |||||||||||||||||||| ||||||||||||| ||||||||  |||| | ||| |||||||||||||||    
T  12799475 ttaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccatattttggagcctattttgatgtatat 12799396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 42341626 - 42341707
Alignment:
Q  159 attaatccataaatcatcccattattgtcaattt-aaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||| |||||| ||||||| | ||| |||||||||||||||    
T  42341626 attaatccacaaatcatcccattattgtcactttaaaaaaatacatattttttcccattttggagcctattttgatgtatat 42341707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 7482726 - 7482805
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||| ||||||||||| |||||||| |||| |||||||||||||| | ||| |||||||||||||||    
T  7482726 attaatccacaaatcatctcattattgtcactttaaaaa-tacatatttttccccattttggagcctattttgatgtatat 7482805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 8407757 - 8407677
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||| ||| ||||||||||   ||| |||||||||||||||    
T  8407757 attaatccagaaatcatcacattattgtcactttaaaaaatacatattattccccatttttgagcctattttgatgtatat 8407677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 13306703 - 13306631
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttg 231  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||    
T  13306703 attaatccacaaatcatctcattattgtcactttaaaaaatacatatttttccccattttggagcctattttg 13306631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 9475680 - 9475758
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||| ||||||||| | |||||||||||| | ||| |||||||||||||||    
T  9475680 attaatccacaaatcatcccattattgtcacttt-aaaaatacata-ttttccccattttggagcctattttgatgtatat 9475758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 18146046 - 18145966
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| ||||||| |||||||||||| ||||||||||||| | ||||||||||||   ||  |||||||||||||||    
T  18146046 attaatccacaaatcataccattattgtcactttaaaaaatacatacttttccccattttagagtctattttgatgtatat 18145966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 24361467 - 24361547
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||| | ||||||||| |||||||||| ||||||||||||| ||||||||||||||   ||  |||||||||||||||    
T  24361467 attaatctacaaatcatcctattattgtcactttaaaaaatacatatttttccccattttagagtctattttgatgtatat 24361547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 15180950 - 15181032
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaataca--catttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| |||||||||||||    ||||| ||||||| | ||| |||||||||||||||    
T  15180950 attaatccacaaatcatcccattattgtcactttaaaaaatacattttttttttcccattttggagcctattttgatgtatat 15181032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 232
Target Start/End: Original strand, 17086307 - 17086380
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttga 232  Q
    ||||||||| |||||||| ||||||||||| || |||||||||| ||||||| |||||| | ||| ||||||||    
T  17086307 attaatccacaaatcatctcattattgtcacttaaaaaaatacatatttttctccattttggagcctattttga 17086380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 38465476 - 38465395
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacat-ttttccccatttcgaagcatattttgatgtatat 239  Q
    |||||| || |||||||| ||||||||||| ||||||||||||| || |||| ||||||| | ||| |||||||||||||||    
T  38465476 attaatgcacaaatcatctcattattgtcactttaaaaaatacatatgtttttcccattttggagcctattttgatgtatat 38465395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 6166380 - 6166459
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||| |||||||||||  ||||||| |||| ||||||||| |||| | ||| |||||||||||||||    
T  6166380 attaatccacaaatcatctcattattgtcaccttaaaaa-tacatatttttccctattttggagcctattttgatgtatat 6166459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 16353677 - 16353598
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    |||||||||  ||||||||||||||||||| ||||||||||||| | ||||||| |||| | ||| ||||||||| |||||    
T  16353677 attaatccactaatcatcccattattgtcactttaaaaaatacata-ttttccctattttggagcctattttgatatatat 16353598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 232
Target Start/End: Original strand, 17086397 - 17086468
Alignment:
Q  161 taatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttga 232  Q
    ||||||| |||||||| ||||||||||| || |||||||||| ||||||| |||||| | ||| ||||||||    
T  17086397 taatccacaaatcatctcattattgtcacttaaaaaaatacatatttttctccattttggagcctattttga 17086468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 17587611 - 17587529
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacaca--tttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||| |||||||| || ||||||||||||| |  ||||| ||||||| | ||| |||||||||||||||    
T  17587611 attaatccacaaatcatctcattattgccactttaaaaaatacatattttttttcccattttggagcctattttgatgtatat 17587529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 11445436 - 11445355
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaa-tacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| ||||||||  |||||||| | ||||||||| |||| |||||| ||||||| | ||| |||||||||||||||    
T  11445436 attaatccacaaatcatcttattattgttactttaaaaaaatacatattttttcccattttggagcctattttgatgtatat 11445355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 16868828 - 16868750
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| ||||||||  |||||||||| ||||||||||||| ||||||| ||||||   ||| |||||| ||||||||    
T  16868828 attaatccacaaatcatc--attattgtcactttaaaaaatacatatttttctccatttttgagcctatttttatgtatat 16868750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 24324843 - 24324922
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||| | ||||||||| |||||||||| || |||||||||| ||||||||||||||   ||  |||||||||||||||    
T  24324843 attaatctacaaatcatcctattattgtcactt-aaaaaatacatatttttccccattttagagtctattttgatgtatat 24324922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 160; Significance: 2e-85; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 3 - 239
Target Start/End: Complemental strand, 22504759 - 22504521
Alignment:
Q  3 caataatatcaaactgacatatcatata--gcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtat 100  Q
    ||||| ||||| || |||||||||||||  |||||| |||||||| | |||||||||||  |||||||||||||||||||||||||| ||||||||||||    
T  22504759 caatactatcagaccgacatatcatatatagcatattaagtaatatttatgtaaaaaagacacaaatcatcagcaaatgaaatatgtcatcggtatgtat 22504660  T
Q  101 agaggaacacttattgagaaatgtcaaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaata 200  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||    
T  22504659 agaggaacacatattgagaaatgtcaaacacttagatatatatttctttacctttgaaattaatccacaaatcatgccattattgtcactttaaaaaata 22504560  T
Q  201 cacatttttccccatttcgaagcatattttgatgtatat 239  Q
    |||||||||| |||||| ||||| |||||||||||||||    
T  22504559 cacatttttctccattttgaagcctattttgatgtatat 22504521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 26 - 239
Target Start/End: Original strand, 23067277 - 23067491
Alignment:
Q  26 atatagcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtatagaggaacacttattgagaaatgtc 125  Q
    ||||| ||||| |||||||| |||||||||||||  ||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  23067277 atataacatattaagtaatattcatgtaaaaaagacacaaatcattagcaaatgaaatatgtgatcggtatatatagaggaacacttgttgagaaatgtc 23067376  T
Q  126 aaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcg-aagca 224  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||| | ||||     
T  23067377 aaacacttagacatatatttctttacctttgaaattaatccacaaatcatctcattattgtcactttaaaaaatacacatttttccccattttgaaagcc 23067476  T
Q  225 tattttgatgtatat 239  Q
    |||||||||||||||    
T  23067477 tattttgatgtatat 23067491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 26 - 239
Target Start/End: Original strand, 22821773 - 22821986
Alignment:
Q  26 atatagcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtatagaggaacacttattgagaaatgtc 125  Q
    ||||||||||| |||||||| |||| ||||||||  | ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  22821773 atatagcatattaagtaatattcatctaaaaaagacataaatcatcagcaaataaaatatgtgatcggtatgtatagaggaacacttattgaaaaatgtc 22821872  T
Q  126 aaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcat 225  Q
    ||||||||| | || ||||||||||| ||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||| |||||||| | ||| |    
T  22821873 aaacacttaaaaatttatttctttacttttgaaattaatccacaaatcataccattattgtcactttaaaaaatacacattttcccccattttggagcct 22821972  T
Q  226 attttgatgtatat 239  Q
    ||||||||||||||    
T  22821973 attttgatgtatat 22821986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 749124 - 749204
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  749124 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 749204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 1326846 - 1326766
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  1326846 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 1326766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 2318190 - 2318270
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  2318190 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 2318270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 23767335 - 23767255
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  23767335 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 23767255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 29678566 - 29678486
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  29678566 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 29678486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 1060101 - 1060181
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| |||||||||| || |||||||||||||| | ||| |||||||||||||||    
T  1060101 attaatccacaaatcatcccattattgtcactttaaaaaatgcatatttttccccattttggagcctattttgatgtatat 1060181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 8812570 - 8812650
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| ||||||||| |||| | ||| |||||||||||||||    
T  8812570 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccctattttggagcctattttgatgtatat 8812650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 15146278 - 15146358
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| ||||| |||||||| | ||| |||||||||||||||    
T  15146278 attaatccacaaatcatcccattattgtcactttaaaaaatacatattttcccccattttggagcctattttgatgtatat 15146358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 24110772 - 24110852
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||| ||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  24110772 attaatccacaaatcatcccattactgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 24110852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 11625102 - 11625182
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||| ||||||| | | | |||||||||||||||    
T  11625102 attaatccacaaatcatcccattattgtcactttaaaaaatacatattttttcccattttggaacctattttgatgtatat 11625182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 13209578 - 13209658
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||| ||||||| |||||| | ||| |||||||||||||||    
T  13209578 attaatccacaaatcatctcattattgtcactttaaaaaatacatatttttctccattttggagcctattttgatgtatat 13209658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 20857213 - 20857293
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||| | |||||||||||||| | ||| ||||||| |||||||    
T  20857213 attaatccacaaatcatcccattattgtcactttaaaaaataaatatttttccccattttggagcctattttgttgtatat 20857293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 17994431 - 17994351
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    |||||| || |||||||||||||||||||| ||||||||||||| ||| ||||||||||   ||| |||||||||||||||    
T  17994431 attaattcacaaatcatcccattattgtcactttaaaaaatacatattattccccattttagagcctattttgatgtatat 17994351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 25404577 - 25404657
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| || ||||||||||||||||| ||||||||||| | |||||||||||||| | ||| ||||||||| |||||    
T  25404577 attaatccacaattcatcccattattgtcactttaaaaaatatatatttttccccattttggagcctattttgatatatat 25404657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 11158384 - 11158302
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaataca--catttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| |||||||||||||    ||||| ||||||| | ||| |||||||||||||||    
T  11158384 attaatccacaaatcatcccattattgtcactttaaaaaatacattttttttttcccattttggagcctattttgatgtatat 11158302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 18738911 - 18738831
Alignment:
Q  159 attaatccataaatcatcccattattgtcaattt-aaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||| ||||||||||| ||| |||||||||| ||||| |||||||| | ||| |||||||||||||||    
T  18738911 attaatccacaaatcatcacattattgtcactttaaaaaaatacatattttcccccattttggagc-tattttgatgtatat 18738831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 158; Significance: 3e-84; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 26 - 239
Target Start/End: Complemental strand, 42861 - 42649
Alignment:
Q  26 atatagcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtatagaggaacacttattgagaaatgtc 125  Q
    ||||||||||| ||| |||| | |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42861 atatagcatattaagcaatatttatgtaaaaaagacacaaatcatcagcaaatgaaatatgtgatcggtatgtatagaggaacacttattgagaaatgtc 42762  T
Q  126 aaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcat 225  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||| ||| |||||||||||||||||||||||||||| ||||| |    
T  42761 aaacacttagacatatattt-tttacctttgaaattaatccacaaatcatctcattattctcactttaaaaaatacacatttttccccattttgaagcct 42663  T
Q  226 attttgatgtatat 239  Q
    ||||||||||||||    
T  42662 attttgatgtatat 42649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0572 (Bit Score: 128; Significance: 3e-66; HSPs: 2)
Name: scaffold0572
Description:

Target: scaffold0572; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 26 - 217
Target Start/End: Complemental strand, 1181 - 990
Alignment:
Q  26 atatagcatatcaagtaatactcatgtaaaaaaggtacaaatcatcagcaaatgaaatatgtgatcggtatgtatagaggaacacttattgagaaatgtc 125  Q
    ||||||||||| |||||||| |||| ||||||||  | ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  1181 atatagcatattaagtaatattcatctaaaaaagacataaatcatcagcaaataaaatatgtgatcggtatgtatagaggaacacttattgaaaaatgtc 1082  T
Q  126 aaacacttagacatatatttctttacctttgaaattaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccattt 217  Q
    ||||||||| | || ||||||||||| ||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||| ||||||||    
T  1081 aaacacttaaaaatttatttctttacttttgaaattaatccacaaatcataccattattgtcactttaaaaaatacacattttcccccattt 990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0572; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 213
Target Start/End: Original strand, 1475 - 1511
Alignment:
Q  177 ccattattgtcaatttaaaaaatacacatttttcccc 213  Q
    |||||||||||| ||||||||||||||||||||||||    
T  1475 ccattattgtcactttaaaaaatacacatttttcccc 1511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 7478 - 7558
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  7478 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 7558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 15911 - 15831
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  15911 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 15831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 12793 - 12873
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  12793 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 12873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 11070 - 11150
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  11070 attaatccagaaatcatcacattattgtcactttaaaaaatacatatttttccccattttggagcctattttgatgtatat 11150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 7790 - 7710
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| ||||||| |||||| | ||| |||||||||||||||    
T  7790 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttctccattttggagcctattttgatgtatat 7710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 121004 - 120924
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||   ||| |||||||||||||||    
T  121004 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccatttttgagcctattttgatgtatat 120924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 41647 - 41727
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||| ||| | ||| |||||||||||||||    
T  41647 attaatccacaaatcatcccattattgtcactttaaaaaatacatatttttccccgttttggagcctattttgatgtatat 41727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 10628 - 10708
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| ||||||||| |||||||||| ||||||||||||| ||||| |||||||| | ||| |||||||||||||||    
T  10628 attaatccacaaatcatcctattattgtcactttaaaaaatacatattttcccccattttggagcctattttgatgtatat 10708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 7457 - 7378
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||||||||||||||| ||| ||||||||| ||||||| |||||| ||||| |||||||||||||||    
T  7457 attaatccacaaatcatcccattattgtcacttt-aaaaatacatatttttctccattttgaagcctattttgatgtatat 7378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 187696 - 187775
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaaaatacacatttttccccatttcgaagcatattttgatgtatat 239  Q
    ||||||||| |||||||  ||||||||||| ||||||||||||| |||||| ||||||| | ||| |||||||||||||||    
T  187696 attaatccacaaatcatatcattattgtcactttaaaaaatacatattttt-cccattttggagcctattttgatgtatat 187775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 77453 - 77490
Alignment:
Q  159 attaatccataaatcatcccattattgtcaatttaaaa 196  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  77453 attaatccacaaatcatcccattattgtcactttaaaa 77490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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