View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7298_high_2 (Length: 444)
Name: NF7298_high_2
Description: NF7298
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7298_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 378; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 5 - 431
Target Start/End: Original strand, 21847446 - 21847874
Alignment:
| Q |
5 |
agtttggagtttcgatggtttgtgcgataagtgaagtat--gtggttttggcagtactttagtgtgaagtcacgaacttaaaatttagagttaagaatgt |
102 |
Q |
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|||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
21847446 |
agttaggagtttcgatggtttgtgcgataagtgaagtatatgtggttttggcagtactttagtgtgaagtcgcgaacttaaaatttagagttaagaatgt |
21847545 |
T |
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| Q |
103 |
tttgagaagtgactgctaggaacattcatggaattgttcctaggagcgttcaatttcggaagcttttaagttggcactcaagaagagaatgagaaatatg |
202 |
Q |
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| T |
21847546 |
tttgagaagtgactgctaggaacattcatggaattgttcctaggagccttcaatttcggaagcttttaagttggtactcaagaagagaatgagaaatatg |
21847645 |
T |
|
| Q |
203 |
aaggattttgatttcacgcaacggtataatttaggaacggctaacatggctaatgcgttgtgagtgtttcattgttgtcggcattgagggctagtcacga |
302 |
Q |
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|||||||||||||| ||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21847646 |
aaggattttgattttacgcaacagtgtaatttagaaacggctaacatggctaatgcgttgtgagtgtttcattgttgtcggcattgagggctagtcacga |
21847745 |
T |
|
| Q |
303 |
agagctttatgagatgtttggagatcaaaatttggaagtcaagtttgaacctaacacttgaaagctatgtattgccaaatttggaaagaaattgacatgc |
402 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |
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| T |
21847746 |
agagctttatgagatgtttggagatcaaaatttggaagtcaagtttgaacctaacacttgaaagctatgtattgccaaatttggaaagaaattaacacgc |
21847845 |
T |
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| Q |
403 |
gcgatttagaactggctacaatggttttg |
431 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
21847846 |
gcgatttagaactggctacaatggttttg |
21847874 |
T |
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