View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7298_low_9 (Length: 207)
Name: NF7298_low_9
Description: NF7298
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7298_low_9 |
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Alignment Details
Target: chr2 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 6 - 195
Target Start/End: Original strand, 13286111 - 13286294
Alignment:
| Q |
6 |
tttggagttcaacctattgaaaacagttgagtataaaaattagttcaaccttccgaaaccgttttgtattttttatttcaatgnnnnnnnnnnnnnnaaa |
105 |
Q |
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| T |
13286111 |
tttggagttcaacctattgaaaacagttgagtacaaaaattagttcaaccttccgaaaccgttttgtattttttatttcaatg-----tttttttttaaa |
13286205 |
T |
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| Q |
106 |
tggtaccttatttacgaacaattgcacgtgaatgataccttgtttnnnnnnnnnnnctaaatgctacctatttagggttgttgttgttgt |
195 |
Q |
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| T |
13286206 |
tggtaccttatttacgaacaattgcacgtgaatgataccttgttt-aaaaaaaaaactaaatgctacctatttagggttgttgttgttgt |
13286294 |
T |
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