View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7299_high_3 (Length: 544)
Name: NF7299_high_3
Description: NF7299
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7299_high_3 |
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Alignment Details
Target: chr4 (Bit Score: 473; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 473; E-Value: 0
Query Start/End: Original strand, 17 - 529
Target Start/End: Complemental strand, 37052347 - 37051835
Alignment:
| Q |
17 |
cagatattccctccagaaaattgagagcaattcatgttattgagaatgcaagtttttggattagagtatttcatgctcttaatcagtgtctttagcccca |
116 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37052347 |
cagatattccctccagaaaattgagaccaattcatgttattgagaatgcaagtttttggattagagtatttcatgctcttaatcagtgtctttagcccca |
37052248 |
T |
|
| Q |
117 |
tgtggacaatcacaatagttttgtcaagtttttggcgtgcatactttttcaattgggaactcaatctgtttgttctgtttaaaaaatatacctaannnnn |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
37052247 |
tgtggacaatcacaatagttttgtcaagtttttggcgtgcatactttttcaattgggaactcaatctgtttgttctgtttaaaaaatattcctaattttt |
37052148 |
T |
|
| Q |
217 |
nnnatccgaacattatgtcatttattgaacattttggatctttgataatatgattacagtatatgcttgaagctgctgaagcagttactgacaacttgtc |
316 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37052147 |
tttatccgaacattatgtcatttattgaacattttggatctttgataatatgattacagtatatgcttgaagctgctgaagcagttactgacaacttgtc |
37052048 |
T |
|
| Q |
317 |
catccaagtggagaataatgctcttgatctgcatgagcaggtgattttcttttacttttgtgatttcttactcttcagatgaggtatccttctgagaggg |
416 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37052047 |
catccaagtggagaataatgctcttgatctgcacgagcaggtgattttcttttacttttgtgatttcttactcttcagatgaggtatccttctgagaggg |
37051948 |
T |
|
| Q |
417 |
gaaagtcgtgtaaagggttgaggcgatagctgatagcagctccagtattagggcattatttgagaactggtatgttatacttttgaggattacaggataa |
516 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37051947 |
gaaagtcgtgtaaagggttgaggtgatagctgatagcagctccagtattagggcattatttgagaactggtatgttatacttttgaggattacaggataa |
37051848 |
T |
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| Q |
517 |
tactatggcggat |
529 |
Q |
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||||||||||||| |
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| T |
37051847 |
tactatggcggat |
37051835 |
T |
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