View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7299_high_9 (Length: 308)
Name: NF7299_high_9
Description: NF7299
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7299_high_9 |
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Alignment Details
Target: chr2 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 10 - 290
Target Start/End: Complemental strand, 33094713 - 33094434
Alignment:
| Q |
10 |
aagaatatcattgacttggaacctattcctccctgtccattgactgtaactctccgagggattcacaacccatccatcttttccaccaacatagaatgta |
109 |
Q |
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| T |
33094713 |
aagaatatcattgacttggaacctattcctccctgtccattgactgtaactctccgagggattcacaacccatccatcttttccaccaacatagaatgta |
33094614 |
T |
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| Q |
110 |
tatgcttgagaccttgaaattaaactaaagagaaacaaaaataggcaaatatgtttatgaagcttcatgactaatcaacaagttctatacatatagtata |
209 |
Q |
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| T |
33094613 |
tatgcttgagaacttgaaattaaactaaagagaaacaaaaataggcaaatatgtttatgaagcttcatgactaatcaacaagttctatacatatagtata |
33094514 |
T |
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| Q |
210 |
tattgtacataaacttgatgtgctactatgttcacaaaaaaggttcaagacnnnnnnnctagagatgaatgagagtgagaa |
290 |
Q |
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| T |
33094513 |
tattgtacataaacttgatgtgctactatgttcacaaaaaaggttcaagac-ttttttctagagatgaatgagagtgagaa |
33094434 |
T |
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