View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7300_high_8 (Length: 420)

Name: NF7300_high_8
Description: NF7300
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7300_high_8
NF7300_high_8
[»] chr8 (14 HSPs)
chr8 (127-414)||(471827-472114)
chr8 (1-122)||(472154-472275)
chr8 (120-280)||(44711424-44711585)
chr8 (122-270)||(17106160-17106307)
chr8 (127-274)||(29602023-29602167)
chr8 (120-248)||(14955212-14955341)
chr8 (183-274)||(36470656-36470747)
chr8 (157-242)||(42350414-42350499)
chr8 (127-202)||(20305708-20305784)
chr8 (127-202)||(21092341-21092417)
chr8 (162-274)||(32615869-32615981)
chr8 (146-224)||(6939000-6939078)
chr8 (160-242)||(44063106-44063188)
chr8 (161-197)||(12506449-12506485)
[»] chr5 (8 HSPs)
chr5 (120-274)||(1863094-1863249)
chr5 (157-274)||(6539829-6539946)
chr5 (127-271)||(4462558-4462703)
chr5 (165-238)||(14688761-14688834)
chr5 (164-227)||(19608811-19608874)
chr5 (167-242)||(41384775-41384848)
chr5 (135-241)||(6662062-6662169)
chr5 (153-225)||(29695455-29695526)
[»] chr1 (12 HSPs)
chr1 (120-272)||(2570958-2571110)
chr1 (119-269)||(1411670-1411820)
chr1 (157-256)||(28765507-28765606)
chr1 (127-212)||(3852832-3852918)
chr1 (122-242)||(5173030-5173151)
chr1 (152-254)||(34620605-34620707)
chr1 (162-271)||(42592651-42592760)
chr1 (127-233)||(15280480-15280587)
chr1 (159-242)||(39276713-39276796)
chr1 (165-242)||(49805965-49806043)
chr1 (162-255)||(7444948-7445041)
chr1 (162-274)||(27262708-27262821)
[»] chr4 (12 HSPs)
chr4 (127-274)||(51277950-51278099)
chr4 (120-223)||(38868832-38868936)
chr4 (127-274)||(14193813-14193961)
chr4 (122-243)||(24970947-24971069)
chr4 (161-258)||(38547446-38547543)
chr4 (165-242)||(26683635-26683712)
chr4 (164-255)||(6317014-6317104)
chr4 (157-236)||(31557469-31557548)
chr4 (162-196)||(33881906-33881940)
chr4 (165-235)||(53333553-53333623)
chr4 (157-223)||(33095232-33095300)
chr4 (162-227)||(37626974-37627039)
[»] chr3 (9 HSPs)
chr3 (156-274)||(31830155-31830273)
chr3 (161-274)||(30374663-30374776)
chr3 (157-274)||(36473084-36473201)
chr3 (143-260)||(23512718-23512836)
chr3 (169-258)||(42983913-42984002)
chr3 (162-242)||(25985404-25985484)
chr3 (157-237)||(43817133-43817213)
chr3 (152-248)||(3074020-3074117)
chr3 (160-212)||(35286578-35286630)
[»] chr7 (14 HSPs)
chr7 (151-273)||(30824915-30825039)
chr7 (120-241)||(4232723-4232845)
chr7 (120-233)||(35720943-35721057)
chr7 (120-244)||(23797684-23797809)
chr7 (127-271)||(43189797-43189943)
chr7 (127-235)||(31188744-31188853)
chr7 (152-241)||(5000358-5000448)
chr7 (128-236)||(35727457-35727566)
chr7 (133-274)||(27088305-27088448)
chr7 (133-274)||(27189853-27189996)
chr7 (167-251)||(26807410-26807494)
chr7 (204-247)||(36839119-36839162)
chr7 (152-258)||(39118251-39118360)
chr7 (162-258)||(28197994-28198090)
[»] chr6 (6 HSPs)
chr6 (119-227)||(21273680-21273789)
chr6 (127-274)||(3686792-3686940)
chr6 (165-279)||(31597482-31597597)
chr6 (127-223)||(10228310-10228406)
chr6 (120-188)||(24093784-24093853)
chr6 (152-193)||(31535689-31535730)
[»] chr2 (7 HSPs)
chr2 (157-247)||(40867948-40868039)
chr2 (128-242)||(12880083-12880198)
chr2 (157-242)||(41284593-41284678)
chr2 (156-247)||(40462075-40462166)
chr2 (152-256)||(752135-752239)
chr2 (161-223)||(3773034-3773096)
chr2 (172-241)||(9048946-9049015)
[»] scaffold0268 (1 HSPs)
scaffold0268 (128-211)||(19143-19227)


Alignment Details
Target: chr8 (Bit Score: 260; Significance: 1e-145; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 127 - 414
Target Start/End: Complemental strand, 472114 - 471827
Alignment:
Q  127 aagaaatttaaaaaggaaattttatttgggaatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttcta 226  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  472114 aagaaatttaaaaaagaaattttatttggaaatgatgtattcaacacattgaaagtttaaaaagtaactttatctacataaaacttgtaaattatttcta 472015  T
Q  227 tatttaaatctttaactagtgctctaagggcattgattaacaagacccctattaatttagtagaaaacggcatcaattagggaacttcatcaaatcaaat 326  Q
    |||||||||  ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  472014 tatttaaattcttaactagtgctctaagagcattggttaacaagacccctattaatttagtagaaaacggcatcaattagggaacttcatcaaatcaaat 471915  T
Q  327 agttgatgaagatcaagaaaatcaactctcagaattgtaatcaaatagtttgtttctttattgttttgctttgtcacaatcttgttga 414  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  471914 agttgatgaagatcaagaaaatcaactctcagaattgtaatcaaatagtttgtttctttattgttttgctttgtcacaatcttgttga 471827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 472275 - 472154
Alignment:
Q  1 acgggtcaacacactagtatacatttaattgagatttgaattgtggttcaccatatttaatataggcaaaacatttgatcttataactaattttcgtgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  472275 acgggtcaacacactagtatacatttaattgagatttgaattgtggttcaccatatttaatataggcaaaacatttgatcttataactaatttttgtgtt 472176  T
Q  101 tcattttgtcccgaaaactact 122  Q
    |||||||||||| |||||||||    
T  472175 tcattttgtccccaaaactact 472154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 120 - 280
Target Start/End: Complemental strand, 44711585 - 44711424
Alignment:
Q  120 acttgtcaagaaatttaaaaaggaaattttattt-gggaatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaat 218  Q
    |||||| ||||| ||||||||| ||||||||||| ||||||||| ||||||||||||| |||||||||||||||| |||||||| ||||||||||||||     
T  44711585 acttgttaagaagtttaaaaagaaaattttattttgggaatgatatattcaacacattaaaagtttaaaaagtaattttatctacataaaacttgtaaag 44711486  T
Q  219 tatttctatatttaaatctttaactagtgctctaagggcattgattaacaagacccctatta 280  Q
    |||||||||||||||||||||||||||||  ||||||  |||  |||||||||||| |||||    
T  44711485 tatttctatatttaaatctttaactagtgtcctaaggatattagttaacaagacccttatta 44711424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 122 - 270
Target Start/End: Original strand, 17106160 - 17106307
Alignment:
Q  122 ttgtcaagaaatttaaaaaggaaattttat-ttgggaatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaatta 220  Q
    |||| ||||| ||||||||||||||||||| |||||  ||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  17106160 ttgttaagaagtttaaaaaggaaattttatcttggg--tgaagtattcaacacattgaaagtttaaaaagttactttatctacataaaacttgtaaatta 17106257  T
Q  221 tttctatatttaaatctttaactagtgctctaagggcattgattaacaag 270  Q
     |||||||||| |||| ||||||||||| |  || |||||| ||||||||    
T  17106258 cttctatatttgaatccttaactagtgccccgagagcattggttaacaag 17106307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 127 - 274
Target Start/End: Complemental strand, 29602167 - 29602023
Alignment:
Q  127 aagaaatttaaaaaggaaattttatttgggaatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttcta 226  Q
    ||||| ||||||||||||||||||| |   ||| |||||||  ||| |||||||||||||||||||| ||||| || ||||||||| |||||||||||||    
T  29602167 aagaagtttaaaaaggaaattttatct---aataatgtatttgacatattgaaagtttaaaaagtaaatttatttacataaaacttataaattatttcta 29602071  T
Q  227 tatttaaatctttaactagtgctctaagggcattgattaacaagaccc 274  Q
    ||||| |||| ||||||||| | |||||| ||||| ||||||||||||    
T  29602070 tatttgaatccttaactagtaccctaaggacattggttaacaagaccc 29602023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 120 - 248
Target Start/End: Complemental strand, 14955341 - 14955212
Alignment:
Q  120 acttgtcaagaaatttaaaaaggaaattttat-ttgggaatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaat 218  Q
    |||||| ||||| |||||| ||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||| |    
T  14955341 acttgttaagaattttaaagaggaagttttatcttggaaatgatgcattcaacacattgaaagtttaaaaagtaactttttctttataaaacttctaagt 14955242  T
Q  219 tatttctatatttaaatctttaactagtgc 248  Q
    ||||||||| ||| |||| ||||| |||||    
T  14955241 tatttctatttttgaatccttaacaagtgc 14955212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 183 - 274
Target Start/End: Complemental strand, 36470747 - 36470656
Alignment:
Q  183 ttaaaaagtaactttatctatataaaacttgtaaattatttctatatttaaatctttaactagtgctctaagggcattgattaacaagaccc 274  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||| |||| ||||||||||  |||||| ||||| ||||||||||||    
T  36470747 ttaaaaagtaactttatctacataaaacttgtaaattacttctatatttgaatccttaactagtgtcctaaggacattgcttaacaagaccc 36470656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 157 - 242
Target Start/End: Original strand, 42350414 - 42350499
Alignment:
Q  157 aatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttctatatttaaatctttaac 242  Q
    ||||||| |||||| ||||||||| |||||||||||| ||| |||| |||||| || ||||||||||| || |||||||| |||||    
T  42350414 aatgatgcattcaagacattgaaaatttaaaaagtaaatttttctacataaaatttataaattatttccatttttaaatccttaac 42350499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 20305708 - 20305784
Alignment:
Q  127 aagaaatttaaaaaggaaattttat-ttgggaatgatgtattcaacacattgaaagtttaaaaagtaactttatcta 202  Q
    ||||| |||||||||||| |||||| ||||||| | |||| |||  |||||||||||||||||||||| ||| ||||    
T  20305708 aagaagtttaaaaaggaagttttatcttgggaagggtgtactcataacattgaaagtttaaaaagtaagtttttcta 20305784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 21092341 - 21092417
Alignment:
Q  127 aagaaatttaaaaaggaaattttat-ttgggaatgatgtattcaacacattgaaagtttaaaaagtaactttatcta 202  Q
    ||||| |||||||||||| |||||| ||||||| | |||| |||  |||||||||||||||||||||| ||| ||||    
T  21092341 aagaagtttaaaaaggaagttttatcttgggaagggtgtactcataacattgaaagtttaaaaagtaagtttttcta 21092417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 274
Target Start/End: Original strand, 32615869 - 32615981
Alignment:
Q  162 tgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttctatatttaaatctttaactagtgctctaagggcattg 261  Q
    |||||||||||||||||||  |||||||  |||||||| || || ||| || | |||| ||||||| |||  ||||||||| ||| | ||||||||| |     
T  32615869 tgtattcaacacattgaaacattaaaaaacaactttatttacatgaaagttatcaattgtttctatttttggatctttaacaagtaccctaagggcactt 32615968  T
Q  262 attaacaagaccc 274  Q
     ||||||||||||    
T  32615969 gttaacaagaccc 32615981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 224
Target Start/End: Complemental strand, 6939078 - 6939000
Alignment:
Q  146 ttttatttgggaatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttc 224  Q
    |||| |||||||||  |||||||||  |||||||| || |||||| |||||||| || |||||| || |||||||||||    
T  6939078 ttttttttgggaattgtgtattcaaagcattgaaacttcaaaaagaaactttatatacataaaatttataaattatttc 6939000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 242
Target Start/End: Original strand, 44063106 - 44063188
Alignment:
Q  160 gatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttctatatttaaatctttaac 242  Q
    |||| |||||| | ||||||| |||||||| |||| || || |||||||| || ||||||||||  || ||||||||||||||    
T  44063106 gatgcattcaagatattgaaaatttaaaaaataacattttcaatataaaatttataaattattttaatttttaaatctttaac 44063188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 12506449 - 12506485
Alignment:
Q  161 atgtattcaacacattgaaagtttaaaaagtaacttt 197  Q
    ||||||||||||||||||||  |||||||||||||||    
T  12506449 atgtattcaacacattgaaacgttaaaaagtaacttt 12506485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 104; Significance: 1e-51; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 120 - 274
Target Start/End: Original strand, 1863094 - 1863249
Alignment:
Q  120 acttgtcaagaaatttaaaaaggaaattttat-ttgggaatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaat 218  Q
    |||||| ||||| ||||||||  ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1863094 acttgttaagaagtttaaaaaataaattttatcttggaaatgatgtattcaacacattgaaagtttaaaaagtaactttatctacataaaacttgtaaat 1863193  T
Q  219 tatttctatatttaaatctttaactagtgctctaagggcattgattaacaagaccc 274  Q
    ||||||||||||| |||| ||||||||||| |||||||||||| | ||||||||||    
T  1863194 tatttctatatttgaatccttaactagtgccctaagggcattggtaaacaagaccc 1863249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 157 - 274
Target Start/End: Original strand, 6539829 - 6539946
Alignment:
Q  157 aatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttctatatttaaatctttaactagtgctctaaggg 256  Q
    ||||||| |||||| ||||||||||||||||||||||| || |||| ||||||||| |||||||||||||| |||||||  ||||| | ||| || ||||    
T  6539829 aatgatgcattcaagacattgaaagtttaaaaagtaacattttctacataaaacttataaattatttctatttttaaattcttaaccattgccctgaggg 6539928  T
Q  257 cattgattaacaagaccc 274  Q
    ||||| ||| ||||||||    
T  6539929 cattggttagcaagaccc 6539946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 127 - 271
Target Start/End: Original strand, 4462558 - 4462703
Alignment:
Q  127 aagaaatttaaaaaggaaattttat-ttgggaatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttct 225  Q
    ||||| ||| |||||||| |||| | |||| ||||||| |||||| | ||||||||||||||||||||| || |||| ||||||||| ||||||||||||    
T  4462558 aagaagttttaaaaggaagttttgtcttggaaatgatgcattcaagatattgaaagtttaaaaagtaacattttctacataaaacttataaattatttct 4462657  T
Q  226 atatttaaatctttaactagtgctctaagggcattgattaacaaga 271  Q
    || |||||||  ||||| | ||| || ||||||||| ||| |||||    
T  4462658 atttttaaattcttaaccattgccctgagggcattggttagcaaga 4462703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 14688761 - 14688834
Alignment:
Q  165 attcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttctatatttaaatctt 238  Q
    ||||||||||||||||||||||||| ||| ||| | || ||||||||| |||||||||| ||| ||||||||||    
T  14688761 attcaacacattgaaagtttaaaaactaattttttttacataaaacttataaattatttttatttttaaatctt 14688834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 227
Target Start/End: Original strand, 19608811 - 19608874
Alignment:
Q  164 tattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttctat 227  Q
    |||||||||||||||||  ||||||||||||||| |||| |||||| || | ||||||||||||    
T  19608811 tattcaacacattgaaacattaaaaagtaactttttctacataaaaattatcaattatttctat 19608874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 242
Target Start/End: Original strand, 41384775 - 41384848
Alignment:
Q  167 tcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttctatatttaaatctttaac 242  Q
    ||||||| ||||||||||||||||||  ||| | | |||||||||| |||||||||||||| ||| |||| |||||    
T  41384775 tcaacacgttgaaagtttaaaaagta--tttttttttataaaacttataaattatttctatttttgaatccttaac 41384848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 135 - 241
Target Start/End: Original strand, 6662062 - 6662169
Alignment:
Q  135 taaaaaggaaattttatttgggaatgatgtattcaa-cacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttctatatttaa 233  Q
    |||||| |||||||   ||| |||||||| |||||| |||||||||||||||| || ||||||| |||| || ||| || ||||||||||| || ||| |    
T  6662062 taaaaaagaaatttatcttgagaatgatgcattcaaacacattgaaagtttaataaataactttttctacatcaaatttataaattatttcaatttttga 6662161  T
Q  234 atctttaa 241  Q
    ||| ||||    
T  6662162 atccttaa 6662169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 225
Target Start/End: Complemental strand, 29695526 - 29695455
Alignment:
Q  153 tgggaatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttct 225  Q
    |||||| ||||||| ||||  |||||||||||||||||||| ||| | || |||||| |||||||||| ||||    
T  29695526 tgggaacgatgtat-caacctattgaaagtttaaaaagtaattttttgtacataaaatttgtaaattacttct 29695455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 2e-50; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 120 - 272
Target Start/End: Complemental strand, 2571110 - 2570958
Alignment:
Q  120 acttgtcaagaaatttaaaaaggaaattttat-ttgggaatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaat 218  Q
    |||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| |||||| |||||||||||||||    
T  2571110 acttgttaagaagtttaaaaaggaaattttatcttgggaatgatgtattcaacacattgaaactttaaaaa-taactatatctacataaaacttgtaaat 2571012  T
Q  219 tatttctatatttaaatctttaactagtgctctaagggcattgattaacaagac 272  Q
    ||||||||||||| |||| ||||||||||| |||||||||||| ||||||||||    
T  2571011 tatttctatatttgaatccttaactagtgccctaagggcattggttaacaagac 2570958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 119 - 269
Target Start/End: Original strand, 1411670 - 1411820
Alignment:
Q  119 tacttgtcaagaaatttaaaaaggaaattttat-ttgggaatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaa 217  Q
    ||||||| ||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  1411670 tacttgttaagaagtttaaaaaggaaattttatcttaggaatgatgtattcaacacattgaaagtttaaaaagtaa-tttatctacataaaacttgtaaa 1411768  T
Q  218 ttatttctatatttaaatctttaactagtgctctaagggcattgattaacaa 269  Q
    ||| |||||||||| ||||||||||||||||  ||||| ||||| |||||||    
T  1411769 ttacttctatatttgaatctttaactagtgccttaaggacattggttaacaa 1411820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 157 - 256
Target Start/End: Complemental strand, 28765606 - 28765507
Alignment:
Q  157 aatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttctatatttaaatctttaactagtgctctaaggg 256  Q
    ||||||||||||||||||||||||||||||||||||| ||  |||   ||||| |||||||||| |||||| ||| |||| |||||||||||||||||||    
T  28765606 aatgatgtattcaacacattgaaagtttaaaaagtaatttattctgcgtaaaatttgtaaattacttctattttttaatccttaactagtgctctaaggg 28765507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 3852832 - 3852918
Alignment:
Q  127 aagaaatttaaaaaggaaattttat-ttgggaatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaactt 212  Q
    ||||||||||||||| ||||||||| || ||||||||||||||   | ||||||||||||||| |||| |||||||| |||||||||    
T  3852832 aagaaatttaaaaagaaaattttatcttaggaatgatgtattcggtatattgaaagtttaaaaggtaaatttatctacataaaactt 3852918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 122 - 242
Target Start/End: Original strand, 5173030 - 5173151
Alignment:
Q  122 ttgtcaagaaatttaaaaaggaaattttat-ttgggaatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaatta 220  Q
    |||| |||||| ||||| | |||||||||| |||||| ||||| |||||||| ||| ||| || ||||||||||||| ||||||||||||||   ||||     
T  5173030 ttgttaagaaacttaaagaagaaattttatattgggattgatgcattcaacatattaaaacttgaaaaagtaactttttctatataaaacttaccaattc 5173129  T
Q  221 tttctatatttaaatctttaac 242  Q
    ||||||  || |||||||||||    
T  5173130 tttctaatttaaaatctttaac 5173151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 152 - 254
Target Start/End: Complemental strand, 34620707 - 34620605
Alignment:
Q  152 ttgggaatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttctatatttaaatctttaactagtgctct 251  Q
    |||||| ||||| |||||||||||||||| || ||||||||| ||| |||| |||||||||   |||||||||||| ||  |||| ||||| ||||| ||    
T  34620707 ttgggattgatgcattcaacacattgaaacttgaaaaagtaattttttctacataaaacttaccaattatttctattttagaatccttaacaagtgccct 34620608  T
Q  252 aag 254  Q
    |||    
T  34620607 aag 34620605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 271
Target Start/End: Complemental strand, 42592760 - 42592651
Alignment:
Q  162 tgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttctatatttaaatctttaactagtgctctaagggcattg 261  Q
    |||||||||| ||||||||  ||||||||||| ||| || | |||||| || | |||||||||| | |||||||||||||||| ||  | |||||||||     
T  42592760 tgtattcaacccattgaaacgttaaaaagtaattttttcaacataaaatttatcaattatttctttttttaaatctttaactaatgtcccaagggcattt 42592661  T
Q  262 attaacaaga 271  Q
     |||||||||    
T  42592660 gttaacaaga 42592651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 233
Target Start/End: Complemental strand, 15280587 - 15280480
Alignment:
Q  127 aagaaatttaaaaaggaaattttat-ttgggaatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttct 225  Q
    ||||| |||||||||||| |||||| || | ||||||| | |||| | |||||||||||||||| |||| || | || |||||| || ||||||||||||    
T  15280587 aagaagtttaaaaaggaagttttatcttagaaatgatgcactcaagatattgaaagtttaaaaaataacattttttacataaaatttataaattatttct 15280488  T
Q  226 atatttaa 233  Q
    || |||||    
T  15280487 atttttaa 15280480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 159 - 242
Target Start/End: Original strand, 39276713 - 39276796
Alignment:
Q  159 tgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttctatatttaaatctttaac 242  Q
    ||||| |||| ||||||| ||| || ||||||||| ||  |||||||||||||| | |||||||||||| |  |||||||||||    
T  39276713 tgatgcattccacacattaaaatttgaaaaagtaatttattctatataaaacttatcaattatttctatttcaaaatctttaac 39276796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 242
Target Start/End: Complemental strand, 49806043 - 49805965
Alignment:
Q  165 attcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttcta-tatttaaatctttaac 242  Q
    |||||||||||| |||  | ||||||||||||| |||| |||||| || |||||| |||||| | ||||||||||||||    
T  49806043 attcaacacattaaaatataaaaaagtaactttttctacataaaagttataaattgtttctattttttaaatctttaac 49805965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 255
Target Start/End: Original strand, 7444948 - 7445041
Alignment:
Q  162 tgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttctatatttaaatctttaactagtgctctaagg 255  Q
    |||||||||||||||||||  | |||||| |||||| | || || ||| || | |||||||||||| ||  |||||||||| ||||| ||||||    
T  7444948 tgtattcaacacattgaaatatcaaaaagcaactttttatacatgaaagttatcaattatttctattttagaatctttaacaagtgccctaagg 7445041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 274
Target Start/End: Complemental strand, 27262821 - 27262708
Alignment:
Q  162 tgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttcta-tatttaaatctttaactagtgctctaagggcatt 260  Q
    ||||||||||||||| |||  ||||||||||| ||| |||| |||||| || | |||| |||||| | ||| |||| ||||| ||||  ||||||| |||    
T  27262821 tgtattcaacacattaaaacattaaaaagtaattttttctacataaaagttatcaattgtttctattttttgaatccttaacaagtgtcctaagggaatt 27262722  T
Q  261 gattaacaagaccc 274  Q
      ||||||||||||    
T  27262721 tgttaacaagaccc 27262708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 2e-43; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 127 - 274
Target Start/End: Original strand, 51277950 - 51278099
Alignment:
Q  127 aagaaatttaaaaaggaaattttat-ttgggaatgatgta-ttcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttc 224  Q
    ||||| ||||||||||||||||||| |||| ||||||||| || ||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||    
T  51277950 aagaagtttaaaaaggaaattttatcttggaaatgatgtaatttaacacattgaaagtttaaaaattaaatttatctacataaaacttgtaaattatttc 51278049  T
Q  225 tatatttaaatctttaactagtgctctaagggcattgattaacaagaccc 274  Q
    ||||||| |||||||||||||||| |||||| ||||  ||||||||||||    
T  51278050 tatatttgaatctttaactagtgccctaaggacattagttaacaagaccc 51278099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 120 - 223
Target Start/End: Original strand, 38868832 - 38868936
Alignment:
Q  120 acttgtcaagaaatttaaaaaggaaattttat-ttgggaatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaat 218  Q
    |||||| ||||||| |||| |||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||| |||||    
T  38868832 acttgttaagaaatctaaagaggaaattttgtcttgggaatgatgcattcaacacattgaaagtttaaaaagtaactttttctacataaaacttataaat 38868931  T
Q  219 tattt 223  Q
    |||||    
T  38868932 tattt 38868936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 127 - 274
Target Start/End: Complemental strand, 14193961 - 14193813
Alignment:
Q  127 aagaaatttaaaaaggaaattttatttgggaa-tgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttct 225  Q
    ||||| |||||||||||| |||||| | |||| ||||| |||||| ||||||||||||||||||||||| || |||| |||||| || |||||||||| |    
T  14193961 aagaagtttaaaaaggaagttttatctcggaaatgatgcattcaagacattgaaagtttaaaaagtaacattttctacataaaatttataaattattttt 14193862  T
Q  226 atatttaaatctttaactagtgctctaagggcattgattaacaagaccc 274  Q
    || |||||||  ||||| | ||| || ||||||||| ||| ||||||||    
T  14193861 atttttaaattcttaaccattgccctgagggcattggttagcaagaccc 14193813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 122 - 243
Target Start/End: Original strand, 24970947 - 24971069
Alignment:
Q  122 ttgtcaagaaatttaaaaaggaaattttat-ttgggaatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaatta 220  Q
    |||| ||||| |||||| |||||||||| | |||  ||||||||||| | |||||||||||||||||||||||| || |||  || ||| ||||||||||    
T  24970947 ttgttaagaagtttaaagaggaaattttgtcttgaaaatgatgtattaagcacattgaaagtttaaaaagtaaccttttctgcatgaaatttgtaaatta 24971046  T
Q  221 tttctatatttaaatctttaact 243  Q
     |||||| ||| |||| ||||||    
T  24971047 cttctatttttgaatccttaact 24971069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 258
Target Start/End: Complemental strand, 38547543 - 38547446
Alignment:
Q  161 atgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttctatatttaaatctttaactagtgctctaagggca 258  Q
    ||||||||||||||||||||  ||||||||||  ||| |  | |||||| || | |||||||||| | |||||||||||||||||||| | |||||||    
T  38547543 atgtattcaacacattgaaatattaaaaagtagtttttttaacataaaatttatcaattatttctttttttaaatctttaactagtgcccgaagggca 38547446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 165 - 242
Target Start/End: Complemental strand, 26683712 - 26683635
Alignment:
Q  165 attcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttctatatttaaatctttaac 242  Q
    |||||| ||||||||| ||||||||||||  || |||| |||||| || ||||||||||| || |||||||| |||||    
T  26683712 attcaagacattgaaaatttaaaaagtaatattttctacataaaatttataaattatttccatttttaaatccttaac 26683635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 164 - 255
Target Start/End: Original strand, 6317014 - 6317104
Alignment:
Q  164 tattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttctatatttaaatctttaactagtgctctaagg 255  Q
    ||||||||| |||||||  ||||||| ||||||| || |||||||| || | |||||||||  | ||| |||||||||||||||| ||||||    
T  6317014 tattcaacatattgaaacattaaaaaataactttttcaatataaaatttatcaattatttcctt-tttgaatctttaactagtgccctaagg 6317104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 31557469 - 31557548
Alignment:
Q  157 aatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttctatatttaaatc 236  Q
    |||||||  ||||||||||| || ||||||||||||||  | ||||||| |||||| || ||||||||||  ||||||||    
T  31557469 aatgatgctttcaacacattaaacgtttaaaaagtaacaatttctatatgaaacttatagattatttctaattttaaatc 31557548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 196
Target Start/End: Complemental strand, 33881940 - 33881906
Alignment:
Q  162 tgtattcaacacattgaaagtttaaaaagtaactt 196  Q
    ||||||||||||||||||| |||||||||||||||    
T  33881940 tgtattcaacacattgaaattttaaaaagtaactt 33881906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 53333623 - 53333553
Alignment:
Q  165 attcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttctatatttaaat 235  Q
    |||||| | ||| |||||||||||||||||||| |||| || ||| || |||||||||| ||| |||||||    
T  53333623 attcaagatattaaaagtttaaaaagtaactttttctacatgaaatttataaattatttttatttttaaat 53333553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 33095300 - 33095232
Alignment:
Q  157 aatgatgtattcaacacattgaaagtttaaaaag--taactttatctatataaaacttgtaaattattt 223  Q
    ||||||| ||| |||| |||||| |||||||||   ||||||||| |||||||||||| ||||||||||    
T  33095300 aatgatgcatttaacatattgaatgtttaaaaataataactttatttatataaaacttataaattattt 33095232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 37626974 - 37627039
Alignment:
Q  162 tgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttctat 227  Q
    ||||||||||||||| |||  ||||||||||||||| |||| |||||| || | |||| |||||||    
T  37626974 tgtattcaacacatttaaacattaaaaagtaactttttctacataaaagttatcaattgtttctat 37627039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 1e-41; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 156 - 274
Target Start/End: Complemental strand, 31830273 - 31830155
Alignment:
Q  156 gaatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttctatatttaaatctttaactagtgctctaagg 255  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||| |||||||| || ||||||    
T  31830273 gaatgatatattcaacacattgaaagtttaaaaagtaactttgtctacataaaacttgtaaattatttctatatttgaatccttaactagagccctaagg 31830174  T
Q  256 gcattgattaacaagaccc 274  Q
    |||||| ||||||||||||    
T  31830173 gcattggttaacaagaccc 31830155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 161 - 274
Target Start/End: Original strand, 30374663 - 30374776
Alignment:
Q  161 atgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttctatatttaaatctttaactagtgctctaagggcatt 260  Q
    ||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| || ||| |||||||||||    
T  30374663 atgtatttaacacattaaaagtttaaaaagtaaccttatctatataaaacttgtaaattatttctatatttgaatctttaattaatgccctaagggcatt 30374762  T
Q  261 gattaacaagaccc 274  Q
    | ||||||| ||||    
T  30374763 ggttaacaacaccc 30374776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 157 - 274
Target Start/End: Complemental strand, 36473201 - 36473084
Alignment:
Q  157 aatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttctatatttaaatctttaactagtgctctaaggg 256  Q
    ||||||| |||||| |||||||||| |||||||||||| || |||| |||||| || |||||||||||||| |||||||  ||||| | ||| || ||||    
T  36473201 aatgatgcattcaagacattgaaagattaaaaagtaacattttctacataaaatttataaattatttctatttttaaattcttaaccattgccctgaggg 36473102  T
Q  257 cattgattaacaagaccc 274  Q
    ||| | ||| ||||||||    
T  36473101 catcggttagcaagaccc 36473084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 260
Target Start/End: Complemental strand, 23512836 - 23512718
Alignment:
Q  143 aaattttat-ttgggaatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttctatatttaaatctttaa 241  Q
    ||||||||| ||||||||  || |||||| |||||||||    |||||||||| || |||  |||||| |||| |||||||||||| ||  |||||||||    
T  23512836 aaattttatcttgggaattgtgcattcaagacattgaaacaacaaaaagtaacattttctccataaaatttgtcaattatttctattttggaatctttaa 23512737  T
Q  242 ctagtgctctaagggcatt 260  Q
    | |||||||| ||||||||    
T  23512736 caagtgctcttagggcatt 23512718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 42983913 - 42984002
Alignment:
Q  169 aacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttctatatttaaatctttaactagtgctctaagggca 258  Q
    |||||||||||| ||||||||||||||||  ||| |||||| || ||||| ||||| || ||| |||| ||||| |||| ||| ||||||    
T  42983913 aacacattgaaaatttaaaaagtaactttgactacataaaatttataaatcatttccatttttgaatcattaacaagtgttcttagggca 42984002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 242
Target Start/End: Original strand, 25985404 - 25985484
Alignment:
Q  162 tgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttctatatttaaatctttaac 242  Q
    ||||||||||| || ||||  |||||||  |||||| ||||||||||| || | |||||||||||| |||||||| |||||    
T  25985404 tgtattcaacatatcgaaacattaaaaaacaactttttctatataaaagttatcaattatttctatttttaaatccttaac 25985484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 237
Target Start/End: Original strand, 43817133 - 43817213
Alignment:
Q  157 aatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttctatatttaaatct 237  Q
    ||||||| ||||||||| || ||| |||||||  ||||||| |||| |||||||||  ||||||||||||| ||| |||||    
T  43817133 aatgatgcattcaacacgttaaaaatttaaaatttaactttttctacataaaacttacaaattatttctatttttgaatct 43817213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 248
Target Start/End: Original strand, 3074020 - 3074117
Alignment:
Q  152 ttgggaatgatgtattcaacacattgaaagtttaaaaagtaactttat-ctatataaaacttgtaaattatttctatatttaaatctttaactagtgc 248  Q
    |||||| ||||| | ||||||| |||||| || ||||||||| ||| | |||||||||| || | |||||||||||  || ||||| |||||||||||    
T  3074020 ttgggattgatgcactcaacactttgaaacttgaaaaagtaatttttttctatataaaatttatcaattatttctaatttaaaatccttaactagtgc 3074117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 35286578 - 35286630
Alignment:
Q  160 gatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaactt 212  Q
    |||| |||||||||||| ||| || |||| |||||||| ||||||||||||||    
T  35286578 gatgaattcaacacattaaaacttgaaaaggtaactttttctatataaaactt 35286630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 6e-41; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 151 - 273
Target Start/End: Original strand, 30824915 - 30825039
Alignment:
Q  151 tttgggaatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttctatatttaaatctttaactagtg--c 248  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||  |    
T  30824915 tttggaaatgatgtattcaacacattgaaaatttaaaaagtaactttatctgcataaaacttgtaaattatttctatatttgaatctttaactagtgccc 30825014  T
Q  249 tctaagggcattgattaacaagacc 273  Q
    ||||||||||||| |||| ||||||    
T  30825015 tctaagggcattggttaataagacc 30825039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 120 - 241
Target Start/End: Original strand, 4232723 - 4232845
Alignment:
Q  120 acttgtcaagaaatttaaaaaggaaattttat-ttgggaatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaat 218  Q
    |||||| ||||| ||||||||  ||||||||| ||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4232723 acttgttaagaagtttaaaaataaaattttatcttaagaatgatgtattcaacacattgaaagtttaaaaagtaattttatctatataaaacttgtaaat 4232822  T
Q  219 tatttctatatttaaatctttaa 241  Q
    ||||| |||| || |||||||||    
T  4232823 tatttttataattgaatctttaa 4232845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 120 - 233
Target Start/End: Original strand, 35720943 - 35721057
Alignment:
Q  120 acttgtcaagaaatttaaaaaggaaattttattt-gggaatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaat 218  Q
    |||||| ||||| ||||||||| ||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||| |||||| |||||||     
T  35720943 acttgttaagaagtttaaaaagaaaattttattttgggaatgatgcattcaacatattgaaagtttaaaaagtaactttatctacataaaatttgtaaac 35721042  T
Q  219 tatttctatatttaa 233  Q
    ||||| |||||||||    
T  35721043 tatttttatatttaa 35721057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 120 - 244
Target Start/End: Original strand, 23797684 - 23797809
Alignment:
Q  120 acttgtcaagaaatttaaaaaggaaattttat-ttgggaatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaat 218  Q
    |||||| ||||| |||||| || ||||||||| ||||||||||||||||||| ||||| ||| |||||||||||| ||| ||||  ||||| || |||||    
T  23797684 acttgttaagaagtttaaagagaaaattttatcttgggaatgatgtattcaatacattaaaaatttaaaaagtaattttttctacctaaaatttataaat 23797783  T
Q  219 tatttctatatttaaatctttaacta 244  Q
    || |||||| ||| ||||||||||||    
T  23797784 tacttctatttttgaatctttaacta 23797809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 127 - 271
Target Start/End: Original strand, 43189797 - 43189943
Alignment:
Q  127 aagaaatttaaaaaggaaattttat-ttgggaatgatgtattcaacacattgaaagtttaaaaagtaac-tttatctatataaaacttgtaaattatttc 224  Q
    ||||| |||| | |||||||||||| ||| |||||||||| |||| ||||||||| ||||||||||||| ||| | || |||||| || ||||||| |||    
T  43189797 aagaagtttacataggaaattttatcttgagaatgatgtagtcaatacattgaaaatttaaaaagtaacttttttttacataaaatttataaattacttc 43189896  T
Q  225 tatatttaaatctttaactagtgctctaagggcattgattaacaaga 271  Q
    ||| ||| |||| ||||||||||| ||||| ||||| |||| |||||    
T  43189897 tatttttgaatcgttaactagtgccctaagagcattaattagcaaga 43189943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 31188853 - 31188744
Alignment:
Q  127 aagaaatttaaaaaggaaattttat-ttgggaatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttct 225  Q
    ||||| |||||||||||| |||| | |||  ||||||| |||||| ||||||||||||||||||||||| || |||| ||||||||| |||||||||| |    
T  31188853 aagaagtttaaaaaggaagttttgtcttgaaaatgatgcattcaagacattgaaagtttaaaaagtaacattttctacataaaacttataaattattttt 31188754  T
Q  226 atatttaaat 235  Q
    || |||||||    
T  31188753 atttttaaat 31188744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 152 - 241
Target Start/End: Original strand, 5000358 - 5000448
Alignment:
Q  152 ttgggaatgatgtattcaacacattgaaagtttaaaaagtaac-tttatctatataaaacttgtaaattatttctatatttaaatctttaa 241  Q
    |||| ||||||| |||||| ||||||||||||||||||||||| ||| | || ||||||||| |||||||||||||| |||||||| ||||    
T  5000358 ttggaaatgatgcattcaagacattgaaagtttaaaaagtaacatttttttacataaaacttataaattatttctatttttaaatccttaa 5000448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 128 - 236
Target Start/End: Complemental strand, 35727566 - 35727457
Alignment:
Q  128 agaaatttaaaaaggaaattttat-ttgggaatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttcta 226  Q
    ||||||||||| | |||| ||||| |||||||| |||||||||||| ||||||| || ||||||||| ||| ||||||||||| || | |||||||| ||    
T  35727566 agaaatttaaataagaaactttatcttgggaattatgtattcaacatattgaaatttaaaaaagtaattttttctatataaaatttttcaattattttta 35727467  T
Q  227 tatttaaatc 236  Q
    | ||| ||||    
T  35727466 tttttgaatc 35727457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 133 - 274
Target Start/End: Original strand, 27088305 - 27088448
Alignment:
Q  133 tttaaaaaggaaattttat-ttgggaatgatgtattcaacacattgaaagtttaaaaagtaact-ttatctatataaaacttgtaaattatttctatatt 230  Q
    |||||||||||| |||| | |||| ||| ||  |||||| |||||||||||||||||||||| | || |||| ||||||||| |||| ||||||||| ||    
T  27088305 tttaaaaaggaagttttgtcttggaaataatacattcaagacattgaaagtttaaaaagtaaatattttctacataaaacttataaaatatttctatttt 27088404  T
Q  231 taaatctttaactagtgctctaagggcattgattaacaagaccc 274  Q
    |||||  ||||| | |||  | ||| ||||||||| ||||||||    
T  27088405 taaattattaaccattgccatgaggacattgattagcaagaccc 27088448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 133 - 274
Target Start/End: Complemental strand, 27189996 - 27189853
Alignment:
Q  133 tttaaaaaggaaattttat-ttgggaatgatgtattcaacacattgaaagtttaaaaagtaact-ttatctatataaaacttgtaaattatttctatatt 230  Q
    |||||||||||| |||| | |||| ||| ||  |||||| |||||||||||||||||||||| | || |||| ||||||||| |||| ||||||||| ||    
T  27189996 tttaaaaaggaagttttgtcttggaaataatacattcaagacattgaaagtttaaaaagtaaatattttctacataaaacttataaaatatttctatttt 27189897  T
Q  231 taaatctttaactagtgctctaagggcattgattaacaagaccc 274  Q
    |||||  ||||| | |||  | ||| ||||||||| ||||||||    
T  27189896 taaattattaaccattgccatgaggacattgattagcaagaccc 27189853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 26807410 - 26807494
Alignment:
Q  167 tcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttctatatttaaatctttaactagtgctct 251  Q
    |||||||||||||| ||||||||||||||||   || || ||| |||||||| ||||| || |||||||  ||||| ||||||||    
T  26807410 tcaacacattgaaattttaaaaagtaacttttcataaattaaatttgtaaatcatttccatttttaaatacttaacaagtgctct 26807494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 204 - 247
Target Start/End: Complemental strand, 36839162 - 36839119
Alignment:
Q  204 ataaaacttgtaaattatttctatatttaaatctttaactagtg 247  Q
    |||||||||||||||||||||||| ||| |||||||||| ||||    
T  36839162 ataaaacttgtaaattatttctattttttaatctttaacaagtg 36839119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 152 - 258
Target Start/End: Original strand, 39118251 - 39118360
Alignment:
Q  152 ttgggaatgatgtattcaacacattgaaagtttaaaaa---gtaactttatctatataaaacttgtaaattatttctatatttaaatctttaactagtgc 248  Q
    |||| ||||||| ||| ||| |||||||| ||||||||   ||||| || |  | ||| ||||| | |||||||||||| ||| |||||||||||| |||    
T  39118251 ttggaaatgatgcatttaactcattgaaactttaaaaaatagtaacatttttcacatagaacttatcaattatttctattttttaatctttaactaatgc 39118350  T
Q  249 tctaagggca 258  Q
    ||||||||||    
T  39118351 tctaagggca 39118360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 258
Target Start/End: Complemental strand, 28198090 - 28197994
Alignment:
Q  162 tgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttctatatttaaatctttaactagtgctctaagggca 258  Q
    ||||||||| ||||||||| || |||||| |||||| |||| |||||  || |||||||||||    ||| |||| ||||| ||||| |||||||||    
T  28198090 tgtattcaagacattgaaacttcaaaaagaaactttttctacataaattttataaattatttcctcttttgaatccttaacaagtgcactaagggca 28197994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 3e-24; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 119 - 227
Target Start/End: Complemental strand, 21273789 - 21273680
Alignment:
Q  119 tacttgtcaagaaatttaaaaaggaaattttat-ttgggaatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaa 217  Q
    ||||||| || || |||||| ||  |||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||| | |||| |||||||    
T  21273789 tacttgttaaaaagtttaaagagataattttatcttgggaacgatgtattcaacacatggaaagtttaaaaagtaactttatctacacaaaatttgtaaa 21273690  T
Q  218 ttatttctat 227  Q
    ||||||||||    
T  21273689 ttatttctat 21273680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 127 - 274
Target Start/End: Original strand, 3686792 - 3686940
Alignment:
Q  127 aagaaatttaaaaaggaaattttat-ttgggaatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttct 225  Q
    ||||| |||||||| ||| |||| | |||| ||||||| |||||| | |||||||||||||||| || | || || | ||||||||| ||||||||||||    
T  3686792 aagaagtttaaaaatgaagttttgtcttggaaatgatgcattcaagatattgaaagtttaaaaaatagcattttcgacataaaacttataaattatttct 3686891  T
Q  226 atatttaaatctttaactagtgctctaagggcattgattaacaagaccc 274  Q
    || |||||||  ||||| | ||| |  ||||||||| ||| ||||||||    
T  3686892 atttttaaattcttaaccattgccccgagggcattgcttagcaagaccc 3686940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 165 - 279
Target Start/End: Complemental strand, 31597597 - 31597482
Alignment:
Q  165 attcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttcta-tatttaaatctttaactagtgctctaagggcattgat 263  Q
    |||||||||||| |||  ||||||||||||||| |||| |||||| || |||||| ||| || | |||||||| ||||| |||| ||| || |||||  |    
T  31597597 attcaacacattaaaacattaaaaagtaactttttctacataaaagttataaattgtttttattttttaaatccttaacaagtgttcttagagcatttgt 31597498  T
Q  264 taacaagacccctatt 279  Q
    ||||||||||| ||||    
T  31597497 taacaagacccttatt 31597482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 223
Target Start/End: Original strand, 10228310 - 10228406
Alignment:
Q  127 aagaaatttaaaaaggaaattttat-ttgggaatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattattt 223  Q
    |||||||||||||||||| |||| | |||| ||||||| |||||| ||||| ||||||| |||||||| ||| |||| | |||| || ||||||||||    
T  10228310 aagaaatttaaaaaggaagttttttcttggaaatgatgcattcaagacattaaaagttt-aaaagtaattttttctacaaaaaatttataaattattt 10228406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 188
Target Start/End: Original strand, 24093784 - 24093853
Alignment:
Q  120 acttgtcaagaaatttaaaaaggaaattttat-ttgggaatgatgtattcaacacattgaaagtttaaaa 188  Q
    |||||| |||||  ||||||  |||| ||||| |||||||||||||||||||||| |||||| |||||||    
T  24093784 acttgttaagaagcttaaaagagaaagtttatcttgggaatgatgtattcaacaccttgaaactttaaaa 24093853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 31535689 - 31535730
Alignment:
Q  152 ttgggaatgatgtattcaacacattgaaagtttaaaaagtaa 193  Q
    |||| ||||||| ||| |||||||||||||||||||||||||    
T  31535689 ttggaaatgatgcatttaacacattgaaagtttaaaaagtaa 31535730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 1e-20; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 157 - 247
Target Start/End: Original strand, 40867948 - 40868039
Alignment:
Q  157 aatgatgtattcaacacattgaaagtttaaaaagt-aactttatctatataaaacttgtaaattatttctatatttaaatctttaactagtg 247  Q
    ||||||||||||||||||||||||||||||||| | || ||| ||| ||||||||||||||||||||| ||| ||||||| |||||| ||||    
T  40867948 aatgatgtattcaacacattgaaagtttaaaaattaaattttttctttataaaacttgtaaattatttttatttttaaatatttaacaagtg 40868039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 128 - 242
Target Start/End: Original strand, 12880083 - 12880198
Alignment:
Q  128 agaaatttaaaaaggaaattttat-ttgggaatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttcta 226  Q
    |||||| |||| ||||| |||||| |||| || | ||||||||||||||||||| |||||||||||| ||| |||| ||||||||| | ||||||||| |    
T  12880083 agaaatctaaagaggaagttttatcttggaaacggtgtattcaacacattgaaattttaaaaagtaattttttctacataaaacttatcaattatttcca 12880182  T
Q  227 tatttaaatctttaac 242  Q
    | ||| |||| |||||    
T  12880183 tttttgaatccttaac 12880198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 157 - 242
Target Start/End: Complemental strand, 41284678 - 41284593
Alignment:
Q  157 aatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttctatatttaaatctttaac 242  Q
    ||||||| |||||| ||| |||||||||||||||||||  | |||| |||||| || |||||||||||||| |||||||| |||||    
T  41284678 aatgatgcattcaagacactgaaagtttaaaaagtaacactttctacataaaatttataaattatttctatttttaaatccttaac 41284593  T

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Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 247
Target Start/End: Complemental strand, 40462166 - 40462075
Alignment:
Q  156 gaatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttctatatttaaatctttaactagtg 247  Q
    ||||||| ||||||| | |||  || |||||||||||| ||| |||| ||||||||| ||||||  |||||| ||||||||||||| |||||    
T  40462166 gaatgatatattcaagatattagaaatttaaaaagtaattttttctacataaaacttataaattgcttctatttttaaatctttaattagtg 40462075  T

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Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 256
Target Start/End: Complemental strand, 752239 - 752135
Alignment:
Q  152 ttgggaatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttctatatttaaatctttaactagtgctct 251  Q
    |||||| ||||| |||||||||||||||| || ||||||||| ||| |||| ||||||||    |||||||||||| ||  |||  ||||| ||||| ||    
T  752239 ttgggattgatgcattcaacacattgaaacttgaaaaagtaattttttctacataaaactaaccaattatttctattttagaattcttaacaagtgccct 752140  T
Q  252 aaggg 256  Q
    |||||    
T  752139 aaggg 752135  T

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Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 223
Target Start/End: Original strand, 3773034 - 3773096
Alignment:
Q  161 atgtattcaacacattgaaagtttaaaaagtaactttatctatataaaacttgtaaattattt 223  Q
    |||||||| ||| ||||||| ||||||||  ||||||||||| |||||| || ||||||||||    
T  3773034 atgtattcgacatattgaaactttaaaaatgaactttatctacataaaatttataaattattt 3773096  T

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Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 9049015 - 9048946
Alignment:
Q  172 acattgaaagtttaaaaagtaactttatctatataaaacttgtaaattatttctatatttaaatctttaa 241  Q
    |||||||| |||||||||||||  || |||| |||||| || | |||||||| ||| |||||||||||||    
T  9049015 acattgaaggtttaaaaagtaatcttttctacataaaatttattaattatttttatttttaaatctttaa 9048946  T

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Target: scaffold0268 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 128 - 211
Target Start/End: Complemental strand, 19227 - 19143
Alignment:
Q  128 agaaatttaaaaaggaaattttat-ttgggaatgatgtattcaacacattgaaagtttaaaaagtaactttatctatataaaact 211  Q
    |||||| ||||||||||||||||| |||||||| || || ||| |||||||||| ||||| |||||||||  |||| ||||||||    
T  19227 agaaatctaaaaaggaaattttatcttgggaataatatagtcagcacattgaaactttaacaagtaacttgttctacataaaact 19143  T

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