View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7301_high_7 (Length: 303)
Name: NF7301_high_7
Description: NF7301
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7301_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 263; Significance: 1e-147; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 19 - 292
Target Start/End: Original strand, 3388392 - 3388668
Alignment:
| Q |
19 |
aaagattatttatgttctttatattttcattaagacaagattattccatgttttttaagcataaagttgaatgctaaaggttcgtggaattctggaatgg |
118 |
Q |
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| T |
3388392 |
aaagattatttatgttctttatattttcattaagacaagattattccatgttttttaagcataaagttgaatgctaaaggttcgtggaattctggaatgg |
3388491 |
T |
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| Q |
119 |
aacctcaatgactgcactaacatgtgtgacactaatgcatatga---tgttgcatccaaatcagaaaattttgtatcatataatttgcgctatccaaaac |
215 |
Q |
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| T |
3388492 |
aacctcaatgactgcactaacatgtgtgacactaatgcatatgatgttgttgcatccaaatcagaaaattttgtatcatataatttgcgctatccaaaac |
3388591 |
T |
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| Q |
216 |
tattttctttcaattatcgagtgagtagttaactaaagagagaaaagagggttagtggataagatcaagtcaatatt |
292 |
Q |
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| T |
3388592 |
tattttctttcaattatcgagtgagtagttaactaaagagagaaaagagggttagtggataagatcaagtcaatatt |
3388668 |
T |
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