View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7301_low_10 (Length: 263)
Name: NF7301_low_10
Description: NF7301
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7301_low_10 |
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Alignment Details
Target: chr2 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 45698409 - 45698158
Alignment:
| Q |
1 |
tcctttcctaggagggctttgctttttctcactgtactgaatgcagagctctcttcataattcgaccaaatgtccctaaagatcgttggtggttgagatt |
100 |
Q |
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| T |
45698409 |
tcctttcctaggagggctttgctttttctcactgtactgaatgcagagctctcttcataattcgaccaaatgtccctaaagatcgttggtggttgagatt |
45698310 |
T |
|
| Q |
101 |
gaaatttcagtttcttgttgccagagatcatgcattcattttcatcattgttcaactcgtatgtatcctctaggactctatataagcagatacattgtat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |
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| T |
45698309 |
gaaatttcagtttcttgttgccagagatcatgcattcattttcatcattgttcaactcgtatgtatcctctaggactctatttaagcatatacattgtat |
45698210 |
T |
|
| Q |
201 |
gatttgatgagaatgtctgttaatttcttttccttttctaattgcacaggtt |
252 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45698209 |
gatttgatgagaatgtctgttaatttcttttccttttctaattgcacaggtt |
45698158 |
T |
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