View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7301_low_6 (Length: 314)
Name: NF7301_low_6
Description: NF7301
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7301_low_6 |
 | |
|
| [»] scaffold0029 (1 HSPs) |
| | |
|
| [»] scaffold0002 (2 HSPs) |
| | |
|
| [»] scaffold0131 (1 HSPs) |
| | |
|
| [»] scaffold0418 (2 HSPs) |
| | |
|
Alignment Details
Target: scaffold0029 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 134758 - 134449
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
134758 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaatagataacaa |
134659 |
T |
|
| Q |
101 |
gtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaacaac |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
134658 |
gtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaacaac |
134559 |
T |
|
| Q |
201 |
gtattagctccatctccaaccctcctagccacaagatcaccaaaccatcccctctctccagcaccatcactacccctaagacgactcacctccctccacc |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
134558 |
gtattagctccatctccaaccctcctagccacaagatcaccaaaccaacccctctctccagcaccatcactacccctaagacgactcacctccctccacc |
134459 |
T |
|
| Q |
301 |
aacacgaaac |
310 |
Q |
| |
|
|||| ||||| |
|
|
| T |
134458 |
aacatgaaac |
134449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 294; Significance: 1e-165; HSPs: 2)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 312585 - 312276
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
312585 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaatagataacaa |
312486 |
T |
|
| Q |
101 |
gtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaacaac |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
312485 |
gtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaacaac |
312386 |
T |
|
| Q |
201 |
gtattagctccatctccaaccctcctagccacaagatcaccaaaccatcccctctctccagcaccatcactacccctaagacgactcacctccctccacc |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
312385 |
gtattagctccatctccaaccctcctagccacaagatcaccaaaccaacccctctctccagcaccatcactacccctaagacgactcacctccctccacc |
312286 |
T |
|
| Q |
301 |
aacacgaaac |
310 |
Q |
| |
|
|||| ||||| |
|
|
| T |
312285 |
aacatgaaac |
312276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 328039 - 327730
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
328039 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaatagataacaa |
327940 |
T |
|
| Q |
101 |
gtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaacaac |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
327939 |
gtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaacaac |
327840 |
T |
|
| Q |
201 |
gtattagctccatctccaaccctcctagccacaagatcaccaaaccatcccctctctccagcaccatcactacccctaagacgactcacctccctccacc |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
327839 |
gtattagctccatctccaaccctcctagccacaagatcaccaaaccaacccctctctccagcaccatcactacccctaagacgactcacctccctccacc |
327740 |
T |
|
| Q |
301 |
aacacgaaac |
310 |
Q |
| |
|
|||| ||||| |
|
|
| T |
327739 |
aacatgaaac |
327730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 269; Significance: 1e-150; HSPs: 10)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 8654977 - 8654697
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8654977 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaacagataacaa |
8654878 |
T |
|
| Q |
101 |
gtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaacaac |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8654877 |
gtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaacaac |
8654778 |
T |
|
| Q |
201 |
gtattagctccatctccaaccctcctagccacaagatcaccaaaccatcccctctctccagcaccatcactacccctaaga |
281 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |
|
|
| T |
8654777 |
gtattagctccatctccaaccctcctagccacaagatcaccaaaccatccactctctccagcaccaacactacccctaaga |
8654697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 3129883 - 3129577
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaa |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||| | |||| ||||||||||| |||||| |||||||||||||| ||| ||||| |
|
|
| T |
3129883 |
gtaaagccctacactccgctaacat---ctcctcccactgccacaaacaacgtctccacctccacgtaacccctagctgctccgaatcaatagagaacaa |
3129787 |
T |
|
| Q |
101 |
gtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaacaac |
200 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| | ||||||||||| |
|
|
| T |
3129786 |
gtctgccacagacatgaacttattctctgttaactcaaacagtctactaaaacggacacaaaaaggaacatcccctaaccacctaccaaaccaaaacaat |
3129687 |
T |
|
| Q |
201 |
gtattagctccatctccaaccctcctagccacaagatcaccaaaccatcccctctctccagcaccatcactacccctaagacgactcacctccctccacc |
300 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| ||||| ||||||| || | ||||||| |||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
3129686 |
gtatcagctccatctccaaccctcctagccacatgatcaacaaaccagccgccctctccatcaccatcactacccctaaaacgactcacctccctccacc |
3129587 |
T |
|
| Q |
301 |
aacacgaaac |
310 |
Q |
| |
|
|||||||||| |
|
|
| T |
3129586 |
aacacgaaac |
3129577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 47541161 - 47541406
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaa |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| |||||||||||| | |||| |||||||||||| ||| ||| |||||||||||||||||| ||||| |
|
|
| T |
47541161 |
gtaaagccctacactccgctaacatctcctccttccactgccacaaacgacgtctccacctccacataactcccggctgctccgaatcaacagaaaacaa |
47541260 |
T |
|
| Q |
101 |
gtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaacaac |
200 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
47541261 |
gtctgccacagacatgaacttattctctgttaactcaaacagtctacaaaaacgaacacaaaaaggaacatcccctaaccacctatcaaaccaaaacaac |
47541360 |
T |
|
| Q |
201 |
gtattagctccatctccaaccctcctagccacaagatcaccaaacca |
247 |
Q |
| |
|
|||| | |||||||||||| ||| ||||||||| ||||| ||||||| |
|
|
| T |
47541361 |
gtatcatctccatctccaa-ccttctagccacatgatcaacaaacca |
47541406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 7663143 - 7662966
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaa |
100 |
Q |
| |
|
|||||||| |||||||| |||||| |||||||||||||||||||| ||||| |||||||||| |||| |||| ||||||| |||||||||| ||||| |
|
|
| T |
7663143 |
gtaaagccatacactccactaacatctcctcctcccactgccacaatctacgcctccacctccaaaaaaacccctgctgctccaaatcaacagagaacaa |
7663044 |
T |
|
| Q |
101 |
gtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaa |
178 |
Q |
| |
|
|||||||| |||||| | |||||||||| |||||||||||| ||||| ||||||||||| || |||||||||||||| |
|
|
| T |
7663043 |
gtctgccatagacatgagcttattctctattaactcaaacaatctacgaaaacggacacagaacggaacatcccctaa |
7662966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 2631634 - 2631829
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaa |
100 |
Q |
| |
|
|||||||||||||||| ||| ||| ||||||||||||||||| ||||||||| |||||||||||| |||||||| |||||||||||||||| | ||| |
|
|
| T |
2631634 |
gtaaagccctacactcatctagcaactcctcctcccactgccataacctacgtctccacctccacacctccccccaccgctccgaatcaacagagagcaa |
2631733 |
T |
|
| Q |
101 |
gtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaa |
196 |
Q |
| |
|
||| |||||||||||| |||||||||||||||||||||||| || | || || ||||||| |||| | ||||||| ||||||||| ||||||| |
|
|
| T |
2631734 |
gtcggccacagacatagacttattctctgttaactcaaacaaccgcctaaaccgcacacaaagaggagcctcccctatccacctatcagaccaaaa |
2631829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 20675258 - 20675454
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaa |
100 |
Q |
| |
|
|||||| ||||||||| | | ||| ||||||||||||||||| ||||||||| |||||||||||| |||||||| |||||||||||||| | | ||| |
|
|
| T |
20675258 |
gtaaagtcctacactcatcaagcaactcctcctcccactgccataacctacgtctccacctccacacctccccccaccgctccgaatcaacaaagagcaa |
20675357 |
T |
|
| Q |
101 |
gtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaac |
197 |
Q |
| |
|
||| ||||| || ||| |||||||||||||||||||||||| || | || || ||||||| |||| | ||||||||||||||||| |||||||| |
|
|
| T |
20675358 |
gtcggccacggatatagacttattctctgttaactcaaacaaccgcctaaaccgcacacaaagaggagcctcccctaaccacctatcagaccaaaac |
20675454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 23873380 - 23873240
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaa |
100 |
Q |
| |
|
|||||||||||||||| ||| ||| ||||||||||||||||| |||||||| |||||||||||| |||||||| |||||||||||||||| | ||| |
|
|
| T |
23873380 |
gtaaagccctacactcatctagcaactcctcctcccactgccattacctacgtctccacctccacacctccccccaccgctccgaatcaacagagagcaa |
23873281 |
T |
|
| Q |
101 |
gtctgccacagacataaacttattctctgttaactcaaaca |
141 |
Q |
| |
|
||| || || |||||| |||||||||||||||||||||||| |
|
|
| T |
23873280 |
gtcggcaacggacatagacttattctctgttaactcaaaca |
23873240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 55298856 - 55298996
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaa |
100 |
Q |
| |
|
|||||||||||||||| ||| ||| ||||||||||||||||| || |||||| |||||||||||| |||||||| |||||||||||||||| | ||| |
|
|
| T |
55298856 |
gtaaagccctacactcatctagcaactcctcctcccactgccataaactacgtctccacctccacacctccccccaccgctccgaatcaacagagagcaa |
55298955 |
T |
|
| Q |
101 |
gtctgccacagacataaacttattctctgttaactcaaaca |
141 |
Q |
| |
|
||| || || |||||| |||||||||||||||||||||||| |
|
|
| T |
55298956 |
gtcggcaacggacatagacttattctctgttaactcaaaca |
55298996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 8486885 - 8486699
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaa |
100 |
Q |
| |
|
||||||||||||||| ||| ||| |||| |||||||||||| ||||||||| |||||||||||| |||||||| | |||||||||||||| | ||| |
|
|
| T |
8486885 |
gtaaagccctacactaatctagcaactccttctcccactgccataacctacgtctccacctccacacctccccccaccggtccgaatcaacagagagcaa |
8486786 |
T |
|
| Q |
101 |
gtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatc |
187 |
Q |
| |
|
||| | || |||||| |||||||||||||||||||||||| || | || || ||||||| |||| | ||||||| ||||||||| |
|
|
| T |
8486785 |
gtcgacgacggacatagacttattctctgttaactcaaacaaccgcctaaaccgcacacaaagaggagcctcccctatccacctatc |
8486699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 310
Target Start/End: Complemental strand, 7662952 - 7662904
Alignment:
| Q |
262 |
caccatcactacccctaagacgactcacctccctccaccaacacgaaac |
310 |
Q |
| |
|
||||| ||||| |||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
7662952 |
caccaccactatccctaatacgactcacctccccccaccaacacgaaac |
7662904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 242; Significance: 1e-134; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 10486824 - 10486515
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaa |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||| ||||| |
|
|
| T |
10486824 |
gtaaagccctacactccgctaacatgtcctcctcccactgccacaacctacgtctccacctccacataaccccccgctgctccgaatcaacagagaacaa |
10486725 |
T |
|
| Q |
101 |
gtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaacaac |
200 |
Q |
| |
|
||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
10486724 |
gtctgccacagacatgaacttattctatgttaactcaaacagcctacgaaaacggacacaaaaaggaagatcccctaaccacctatccaaccaaaacaac |
10486625 |
T |
|
| Q |
201 |
gtattagctccatctccaaccctcctagccacaagatcaccaaaccatcccctctctccagcaccatcactacccctaagacgactcacctccctccacc |
300 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| ||||| ||||||| | | ||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10486624 |
gtatcagctccatctccaaccctcctagccacatgatcaacaaaccagctgcactctccatcaccatcactacccctaagacgactcacctccctccacc |
10486525 |
T |
|
| Q |
301 |
aacacgaaac |
310 |
Q |
| |
|
|||||||||| |
|
|
| T |
10486524 |
aacacgaaac |
10486515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 34481183 - 34481408
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaa |
100 |
Q |
| |
|
||||||||||||||||| ||| ||| |||||||||||||||| ||||||||| |||||||||||| |||||||| |||||||||||||||| | ||| |
|
|
| T |
34481183 |
gtaaagccctacactcctctagcaacccctcctcccactgccataacctacgtctccacctccacacttccccccaccgctccgaatcaacagagagcaa |
34481282 |
T |
|
| Q |
101 |
gtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaacaac |
200 |
Q |
| |
|
| ||||||||||||| |||||||||||||||||||||||| || || || | ||||||| |||||| ||||||||||||||||| |||||||| | |
|
|
| T |
34481283 |
atatgccacagacatagacttattctctgttaactcaaacaaccgactaaacctcacacaaagaggaacctcccctaaccacctatcggaccaaaacgaa |
34481382 |
T |
|
| Q |
201 |
gtattagctccatctccaaccctcct |
226 |
Q |
| |
|
|||| ||| ||||| ||||| ||||| |
|
|
| T |
34481383 |
gtatcagccccatcaccaactctcct |
34481408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 587752 - 587859
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaa |
100 |
Q |
| |
|
||||||||||||||||| |||||| |||||||||||| ||| | |||||| |||||||||| | | ||||||| ||||||||| ||||| ||||| |
|
|
| T |
587752 |
gtaaagccctacactcctctaacatatcctcctcccacatccatagcctacgcctccacctccagacatccccccaatgctccgaactcacagagaacaa |
587851 |
T |
|
| Q |
101 |
gtctgcca |
108 |
Q |
| |
|
|| ||||| |
|
|
| T |
587852 |
gtttgcca |
587859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 27795720 - 27795756
Alignment:
| Q |
2 |
taaagccctacactccgctaacaagtcctcctcccac |
38 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
27795720 |
taaagccctacactcctctaccaagtcctcctcccac |
27795756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 202; Significance: 1e-110; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 16 - 285
Target Start/End: Original strand, 21528416 - 21528685
Alignment:
| Q |
16 |
ccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaagtctgccacagacat |
115 |
Q |
| |
|
||||||||| |||||||||||||| ||| ||||||||| |||||||||||| ||||||||| ||||||||||||||||| ||||||||| | |||||||| |
|
|
| T |
21528416 |
ccgctaacatgtcctcctcccactaccataacctacgtctccacctccacataaccccccattgctccgaatcaacagagaacaagtctccaacagacat |
21528515 |
T |
|
| Q |
116 |
aaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaacaacgtattagctccatct |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
21528516 |
gaacttattctctgttaactcaaacagcctacgaaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaacaacgtatcagcttcatct |
21528615 |
T |
|
| Q |
216 |
ccaaccctcctagccacaagatcaccaaaccatcccctctctccagcaccatcactacccctaagacgac |
285 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||||| ||||||||| |||||||||||||||||||||||| |
|
|
| T |
21528616 |
ccaaccctcctagccacatgatcaacaaaccatccgctctctccatcaccatcactacccctaagacgac |
21528685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 36306020 - 36306321
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaa |
100 |
Q |
| |
|
||||||||||||||||| |||||| ||||||| |||||||||||| ||||| |||||||||| | ||||||| ||||||| |||||||||| ||||| |
|
|
| T |
36306020 |
gtaaagccctacactcctctaacatctcctccttccactgccacaatctacgcctccacctccaaacaaccccctgctgctccaaatcaacagagaacaa |
36306119 |
T |
|
| Q |
101 |
gtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaacaac |
200 |
Q |
| |
|
|||||||||| |||| | ||||||||| |||||||||||||| ||||| ||| ||||||| |||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
36306120 |
gtctgccacatacatgagcttattctccgttaactcaaacagtctacgaaaaaggacacagaaaggaacatcccctaaccacctatcataccaaaacaac |
36306219 |
T |
|
| Q |
201 |
gtattagctccatctccaaccctcctagccacaagatcaccaaaccatcccctctctccagcaccatcactacccctaagacgactcacctccctccacc |
300 |
Q |
| |
|
|||| || ||||||||||||||||||||||| | | ||||||| || | || || ||| | ||||| | ||||||||||||||||||||||||| |
|
|
| T |
36306220 |
gtatcagaaccatctccaaccctcctagccacgtggccgacaaaccacccacaatcaccctcactaacactatcactaagacgactcacctccctccacc |
36306319 |
T |
|
| Q |
301 |
aa |
302 |
Q |
| |
|
|| |
|
|
| T |
36306320 |
aa |
36306321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 37530802 - 37531015
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaa |
100 |
Q |
| |
|
||||||||||||||||| ||| ||| |||||||||||||||| ||||||||| |||||||||||| |||||||| |||||||||||||||| | ||| |
|
|
| T |
37530802 |
gtaaagccctacactcctctagcaacccctcctcccactgccataacctacgtctccacctccacacttccccccaccgctccgaatcaacagagagcaa |
37530901 |
T |
|
| Q |
101 |
gtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaacaac |
200 |
Q |
| |
|
|||||||||| ||||| ||||||||||||||||||||||| || || | | ||||||| |||||| ||||||||||||||||| |||||||| | |
|
|
| T |
37530902 |
gtctgccacatacatagtcttattctctgttaactcaaacaaccgactaagtctcacacaaagaggaacctcccctaaccacctatcagaccaaaacgaa |
37531001 |
T |
|
| Q |
201 |
gtattagctccatc |
214 |
Q |
| |
|
|||| ||| ||||| |
|
|
| T |
37531002 |
gtatcagccccatc |
37531015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 32353201 - 32353061
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaa |
100 |
Q |
| |
|
|||||||||||||||| ||| ||| ||||||| ||||||||| ||||||||| |||||||||||| |||||||| |||||||||||||||| | ||| |
|
|
| T |
32353201 |
gtaaagccctacactcatctagcaactcctccttccactgccataacctacgtctccacctccacacctccccccaccgctccgaatcaacagagagcaa |
32353102 |
T |
|
| Q |
101 |
gtctgccacagacataaacttattctctgttaactcaaaca |
141 |
Q |
| |
|
||| ||||| |||||| |||||||||||||||||||||||| |
|
|
| T |
32353101 |
gtcggccacggacatagacttattctctgttaactcaaaca |
32353061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 48073335 - 48073139
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaa |
100 |
Q |
| |
|
||||||||| |||||| ||| ||| ||||||||||||| ||| ||||||||| |||||||||||| |||||||| |||||||||||||||| | ||| |
|
|
| T |
48073335 |
gtaaagccccacactcatctagcaactcctcctcccactcccataacctacgtctccacctccacacctccccccaccgctccgaatcaacagagagcaa |
48073236 |
T |
|
| Q |
101 |
gtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaac |
197 |
Q |
| |
|
||| || || |||||| |||||||||||||||||||||||| || | || || ||||||| |||| | ||||||| ||||||||| |||||||| |
|
|
| T |
48073235 |
gtcggcaacggacatagacttattctctgttaactcaaacaaccgcctaaaccgcacacaaagaggagcctcccctatccacctatcagaccaaaac |
48073139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 48265622 - 48265548
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaacccccc |
75 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||| |
|
|
| T |
48265622 |
gtaaagccctacactccgctaacaactcctcctcccactgccacaacctacgtctccacctccacataacccccc |
48265548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 190; Significance: 1e-103; HSPs: 11)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 49731836 - 49731559
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaa |
100 |
Q |
| |
|
||||||||||||||||||| ||||| |||||||||||||||||||| |||||| |||||||||||| |||||||| |||||||| ||||||||| ||||| |
|
|
| T |
49731836 |
gtaaagccctacactccgccaacaactcctcctcccactgccacaaactacgtctccacctccacataaccccccgctgctccggatcaacagagaacaa |
49731737 |
T |
|
| Q |
101 |
gtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaacaac |
200 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
49731736 |
gtctgccacatacatgaacttattctctgttaactcaaacagtctacgaaaacggacacaaaaaggaacatcccctaaccacctatcaaaccaaaacaat |
49731637 |
T |
|
| Q |
201 |
gtattagctccatctccaaccctcctagccacaagatcaccaaaccatcccctctctccagcaccatcactaccccta |
278 |
Q |
| |
|
|| | |||||||||||||||||||||||||||| ||||| ||||||| || | ||||||| ||||||||||||||||| |
|
|
| T |
49731636 |
gtgtcagctccatctccaaccctcctagccacatgatcaacaaaccagccgcactctccatcaccatcactaccccta |
49731559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 307
Target Start/End: Complemental strand, 30167248 - 30166942
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaa |
100 |
Q |
| |
|
|||||| ||||||||||||||||| |||||||||||||||||||| ||||| |||||||||| ||||| ||| ||||||| ||||||||| ||||| |
|
|
| T |
30167248 |
gtaaagtcctacactccgctaacatctcctcctcccactgccacaatctacgcctccacctccaaaaaacaccctgctgctccagatcaacagagaacaa |
30167149 |
T |
|
| Q |
101 |
gtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaacaac |
200 |
Q |
| |
|
|||||||||| |||| | ||||||||||||||||||||||| ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
30167148 |
gtctgccacaaacatgagcttattctctgttaactcaaacaatctacgaaaacggacacagaacggaacatcccctaaccacctatccaaccaaaacaac |
30167049 |
T |
|
| Q |
201 |
gtattagctccatctccaaccctcctagccacaagatcaccaaaccatcccctctctccagcaccatcactacccctaagacgactcacctccctccacc |
300 |
Q |
| |
|
|||| || ||||| ||||||||||||||||| || |||||||||| || | || || ||||| ||||| |||||| |||||||||||||||||||| |
|
|
| T |
30167048 |
gtatcagaaccatcaccaaccctcctagccacgtgaccaccaaaccacccacagtcaccctcaccagcactatccctaatacgactcacctccctccacc |
30166949 |
T |
|
| Q |
301 |
aacacga |
307 |
Q |
| |
|
||||||| |
|
|
| T |
30166948 |
aacacga |
30166942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 2813404 - 2813208
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaa |
100 |
Q |
| |
|
|||||||||||||||| ||| ||| ||||||||||||||||| ||||||||| |||||||||||| |||||||| |||||||||||||||| | ||| |
|
|
| T |
2813404 |
gtaaagccctacactcatctagcaactcctcctcccactgccataacctacgtctccacctccacacctccccccaccgctccgaatcaacagagagcaa |
2813305 |
T |
|
| Q |
101 |
gtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaac |
197 |
Q |
| |
|
||| || || |||||| |||||||||||||||||||||||| || | || || ||||||| |||| | ||||||| ||||||||| |||||||| |
|
|
| T |
2813304 |
gtcggcaacggacatagacttattctctgttaactcaaacaaccgcctaaaccgcacacaaagaggagcctcccctatccacctatcagaccaaaac |
2813208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 29309644 - 29309840
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaa |
100 |
Q |
| |
|
|||| ||||||||||| ||| ||| ||||||||||||||||| ||||||||| |||||||||||| |||||||| |||||||||| ||||| | ||| |
|
|
| T |
29309644 |
gtaacgccctacactcatctagcaactcctcctcccactgccataacctacgtctccacctccacacctccccccaccgctccgaatcgacagagagcaa |
29309743 |
T |
|
| Q |
101 |
gtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaac |
197 |
Q |
| |
|
||| ||||| |||||| |||||||||||||||||||||||| || | || || ||||||| |||| | ||||||| ||||||||| |||||||| |
|
|
| T |
29309744 |
gtcggccacggacatagacttattctctgttaactcaaacaaccgcctaaaccgcacacaaagaggagcctcccctatccacctatcagaccaaaac |
29309840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 6176382 - 6176186
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaa |
100 |
Q |
| |
|
|||||||||||||||| ||| ||| ||||||||||||||| | ||||||||| |||||||||||| |||||||| |||||||||||||||| | ||| |
|
|
| T |
6176382 |
gtaaagccctacactcatctagcaactcctcctcccactgctataacctacgtctccacctccacacctccccccaccgctccgaatcaacagagagcaa |
6176283 |
T |
|
| Q |
101 |
gtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaac |
197 |
Q |
| |
|
||| || || |||||| ||||||||||| |||||||||||| || | || || ||||||| |||| | ||||||| ||||||||| |||||||| |
|
|
| T |
6176282 |
gtcggcgacggacatagacttattctctattaactcaaacaaccgtctaaaccgcacacaaagaggagcctcccctatccacctatcagaccaaaac |
6176186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 9379333 - 9379447
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaa |
100 |
Q |
| |
|
|||| ||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||||| ||||||||||||| ||||||||| | ||||| |
|
|
| T |
9379333 |
gtaatgccctacactccgctaacatcccctcctcccactgccataacctgcgcctccacctccacaaatccccccactgctctgaatcaacatagaacaa |
9379432 |
T |
|
| Q |
101 |
gtctgccacagacat |
115 |
Q |
| |
|
|| ||||||| |||| |
|
|
| T |
9379433 |
gtttgccacatacat |
9379447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 23602009 - 23602074
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccaca |
66 |
Q |
| |
|
|||||||||||||||| ||| ||| ||||||||||||||||| |||||| || |||||||||||| |
|
|
| T |
23602009 |
gtaaagccctacactcatctagcaactcctcctcccactgccataacctatgtctccacctccaca |
23602074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 25873012 - 25872955
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatcca |
58 |
Q |
| |
|
||||||||||||||||| ||| ||| |||||||||||||||| ||||||||| |||| |
|
|
| T |
25873012 |
gtaaagccctacactcctctagcaacccctcctcccactgccataacctacgtctcca |
25872955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 8943596 - 8943653
Alignment:
| Q |
9 |
ctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccaca |
66 |
Q |
| |
|
|||||||||||| |||| || ||||||||| ||||||||||||| ||||| |||||| |
|
|
| T |
8943596 |
ctacactccgcttacaaatcttcctcccacgcccacaacctacgtctccacttccaca |
8943653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 48569943 - 48569906
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccac |
38 |
Q |
| |
|
||||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
48569943 |
gtaaagccctacactcctctaccaagtcctcctcccac |
48569906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 46248774 - 46248738
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctccca |
37 |
Q |
| |
|
||||||||||||||||| |||||||||| |||||||| |
|
|
| T |
46248774 |
gtaaagccctacactcccctaacaagtcttcctccca |
46248738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 171; Significance: 8e-92; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 1 - 307
Target Start/End: Complemental strand, 15653609 - 15653303
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaa |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||| ||||||||| ||||||| |||||||||| ||||| |
|
|
| T |
15653609 |
gtaaagccctacactccgctaacatctcctcctcccactgccacaatctacgcctccacctccagaaaaccccctgctgctccaaatcaacagagaacaa |
15653510 |
T |
|
| Q |
101 |
gtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaacaac |
200 |
Q |
| |
|
|||||||| |||||| | ||||||||| |||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
15653509 |
gtctgccatagacatgagcttattctccgttaactcaaacagtctacgaaaacgggcacaaaaaggaacatcccctaaccacctatcaaaccaaaacaac |
15653410 |
T |
|
| Q |
201 |
gtattagctccatctccaaccctcctagccacaagatcaccaaaccatcccctctctccagcaccatcactacccctaagacgactcacctccctccacc |
300 |
Q |
| |
|
|||| || |||||||||||||||||||||||| | || ||||||| || | || || ||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
15653409 |
gtatcagatccatctccaaccctcctagccacgtggccaacaaaccacccacaatcaccctcaccaacactatccctaagacgactcacctccctccacc |
15653310 |
T |
|
| Q |
301 |
aacacga |
307 |
Q |
| |
|
||||||| |
|
|
| T |
15653309 |
aacacga |
15653303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 38 - 307
Target Start/End: Original strand, 46623966 - 46624235
Alignment:
| Q |
38 |
ctgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaagtctgccacagacataaacttattctctgttaactca |
137 |
Q |
| |
|
||||||||| ||||| |||||||||| |||| ||| ||||||| |||||||||| |||||||||||||||||||| | ||||||||| ||||||||| |
|
|
| T |
46623966 |
ctgccacaaactacgcctccacctccaaaaaaatccctgctgctccaaatcaacagagaacaagtctgccacagacatgagcttattctccgttaactca |
46624065 |
T |
|
| Q |
138 |
aacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaacaacgtattagctccatctccaaccctcctagccacaagat |
237 |
Q |
| |
|
||||| || || ||||||||||| |||||||||||||||||||||||||| |||||||||||||||| || ||||||| ||||||||||||||| || |
|
|
| T |
46624066 |
aacagtctgcgaaaacggacacagaaaggaacatcccctaaccacctatcaaaccaaaacaacgtatcagaaccatctctaaccctcctagccacgtgac |
46624165 |
T |
|
| Q |
238 |
caccaaaccatcccctctctccagcaccatcactacccctaagacgactcacctccctccaccaacacga |
307 |
Q |
| |
|
|| ||||||| || | || || | ||| ||||| |||||| ||||||||||||||||||||||||||| |
|
|
| T |
46624166 |
caacaaaccacccacagtcaccctcgccaacactatccctaatacgactcacctccctccaccaacacga |
46624235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 13440289 - 13440485
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaa |
100 |
Q |
| |
|
||||||||| |||||| ||| ||| ||||||||||||| ||| || |||||| |||||||||||| |||||||| |||||||||||||||| | ||| |
|
|
| T |
13440289 |
gtaaagcccaacactcatctagcaactcctcctcccactaccataaactacgtctccacctccacacctccccccaccgctccgaatcaacagagagcaa |
13440388 |
T |
|
| Q |
101 |
gtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaac |
197 |
Q |
| |
|
||| || || |||||| |||||||||||||||||||||||| || | || || ||||||| |||| | ||||||| ||||||||| |||||||| |
|
|
| T |
13440389 |
gtcggcaacggacatagacttattctctgttaactcaaacaaccgcctaaaccgcacacaaagaggagcctcccctatccacctatcagaccaaaac |
13440485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 6 - 197
Target Start/End: Complemental strand, 12378627 - 12378436
Alignment:
| Q |
6 |
gccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaagtctg |
105 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||| || ||| |||| ||||| |||||||| ||| ||| | |||| | ||||| | || |
|
|
| T |
12378627 |
gccctacactccgctaacatctcctcctcccactgccacaacctgcgcctccgcctcaacaaatccccccaccgcttcgacttaacaaagaacaaatttg |
12378528 |
T |
|
| Q |
106 |
ccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaac |
197 |
Q |
| |
|
|||||||||| | ||||||||| ||||||||||||| ||| | | || |||| | |||||||||||||| ||||||||| |||||||| |
|
|
| T |
12378527 |
ccacagacatgatcttattctccattaactcaaacagtctatgataccgctcacagagaggaacatcccctatccacctatcataccaaaac |
12378436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 43105547 - 43105669
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaa |
100 |
Q |
| |
|
|||| ||||||||||| ||||||| ||||||||||| ||||||||||| || |||||||||||||| | ||||| || | |||| | ||| ||||| |
|
|
| T |
43105547 |
gtaacgccctacactctgctaacatctcctcctcccattgccacaacctgcgcctccacctccacaaatctccccattgttgcgaactagtagagaacaa |
43105646 |
T |
|
| Q |
101 |
gtctgccacagacataaacttat |
123 |
Q |
| |
|
||||||||| |||| | |||||| |
|
|
| T |
43105647 |
gtctgccaccgacaaagacttat |
43105669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 45943087 - 45943152
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccaca |
66 |
Q |
| |
|
||||||||||||||||| ||| ||| ||||||||||||||||| || |||| | |||||||||||| |
|
|
| T |
45943087 |
gtaaagccctacactcctctagcaactcctcctcccactgccataatctacatctccacctccaca |
45943152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 27724009 - 27723973
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctccca |
37 |
Q |
| |
|
||||||||||||||||| |||||||||| |||||||| |
|
|
| T |
27724009 |
gtaaagccctacactcccctaacaagtcttcctccca |
27723973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 154; Significance: 1e-81; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 7452588 - 7452897
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaa |
100 |
Q |
| |
|
||||||||||||||||| |||| || ||||||||||||||||||| ||||| |||||||||| | ||||||| ||||||| |||||||||| ||||| |
|
|
| T |
7452588 |
gtaaagccctacactcctctaataacacctcctcccactgccacaatctacgcctccacctccaaacaaccccctgctgctccaaatcaacagagaacaa |
7452687 |
T |
|
| Q |
101 |
gtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaacaac |
200 |
Q |
| |
|
||||||||||||||||| ||||||||| |||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
7452688 |
gtctgccacagacataagcttattctccgttaactcaaacagtctacgaaaacggacacagaaaggaacatcccctaaccacctatcataccaaaacaac |
7452787 |
T |
|
| Q |
201 |
gtattagctccatctccaaccctcctagccacaagatcaccaaaccatcccctctctccagcaccatcactacccctaagacgactcacctccctccacc |
300 |
Q |
| |
|
|||| || ||||||||||||||||||||||| | | |||||| || | || || ||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
7452788 |
gtatcagaaccatctccaaccctcctagccacgtgggcgagaaaccacccacaatcaccctcaccaacactatccctaagacgactcacctccctccacc |
7452887 |
T |
|
| Q |
301 |
aacacgaaac |
310 |
Q |
| |
|
|||||||||| |
|
|
| T |
7452888 |
aacacgaaac |
7452897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 16420914 - 16420719
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaa |
100 |
Q |
| |
|
|||||||||||| ||| ||| ||| ||||||||||||||||| ||||||||| |||||||||||| |||||||| |||||||||||||||| | ||| |
|
|
| T |
16420914 |
gtaaagccctacgctcatctagcaactcctcctcccactgccataacctacgtctccacctccacacctccccccaccgctccgaatcaacagagagcaa |
16420815 |
T |
|
| Q |
101 |
gtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaa |
196 |
Q |
| |
|
||| |||||||||||| |||||||||||||||||||||||| || | || || ||||||| |||| | ||||||| ||||||||| ||||||| |
|
|
| T |
16420814 |
gtcggccacagacatagacttattctctgttaactcaaacaaccgcctaaaccgcacacaaagaggagcctcccctatccacctatcagaccaaaa |
16420719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 12134564 - 12134628
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccac |
65 |
Q |
| |
|
||||||||||||||||| ||| |||||||||||||||| ||||||| |||| |||||||||| |
|
|
| T |
12134564 |
gtaaagccctacactcctctaccaagtcctcctcccacgcccacaacgtacgccgccacctccac |
12134628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 19384614 - 19384572
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgcca |
43 |
Q |
| |
|
||||||||||||||||| |||||| ||||||||||||||||| |
|
|
| T |
19384614 |
gtaaagccctacactccactaacatctcctcctcccactgcca |
19384572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 13879390 - 13879354
Alignment:
| Q |
2 |
taaagccctacactccgctaacaagtcctcctcccac |
38 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
13879390 |
taaagccctacactcctctaccaagtcctcctcccac |
13879354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0131 (Bit Score: 150; Significance: 3e-79; HSPs: 1)
Name: scaffold0131
Description:
Target: scaffold0131; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 117 - 310
Target Start/End: Complemental strand, 4337 - 4144
Alignment:
| Q |
117 |
aacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaacaacgtattagctccatctc |
216 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
4337 |
aacttattctctattaactcaaacagcctacgaaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaacaacgtatgagctccatctc |
4238 |
T |
|
| Q |
217 |
caaccctcctagccacaagatcaccaaaccatcccctctctccagcaccatcactacccctaagacgactcacctccctccaccaacacgaaac |
310 |
Q |
| |
|
||||||||| ||||||| ||||| ||||||| || ||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||| |
|
|
| T |
4237 |
caaccctccgagccacatgatcaacaaaccaaccgctctctccatcaccatcactacccctaatacgactcacctccctccaccaccacgaaac |
4144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 146; Significance: 6e-77; HSPs: 13)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 3 - 307
Target Start/End: Original strand, 45421757 - 45422062
Alignment:
| Q |
3 |
aaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaacccccca-ctgctccgaatcaacagataacaag |
101 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||| |||| ||||| |||||||||| |||| |||| ||||||| ||||||||| |||||| |
|
|
| T |
45421757 |
aaagccctacactccgctaacatctcctcctcccactgcgacaatctacgcctccacctccaaaaaaaacccctgctgctccagatcaacagagaacaag |
45421856 |
T |
|
| Q |
102 |
tctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaacaacg |
201 |
Q |
| |
|
||||||||| |||| | ||||||||||||||||||||||| ||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45421857 |
tctgccacatacatgagcttattctctgttaactcaaacaatctacgaaaacggacacagaacggaacatcccctaaccacctatccaaccaaaacaacg |
45421956 |
T |
|
| Q |
202 |
tattagctccatctccaaccctcctagccacaagatcaccaaaccatcccctctctccagcaccatcactacccctaagacgactcacctccctccacca |
301 |
Q |
| |
|
||| || ||||| ||||||||||||||||| || |||||||||| || | || || ||||| ||||| |||||| ||||||||||||||||||||| |
|
|
| T |
45421957 |
tatcagaaccatcaccaaccctcctagccacgtgaccaccaaaccacccacagtcaccctcaccagcactatccctaatacgactcacctccctccacca |
45422056 |
T |
|
| Q |
302 |
acacga |
307 |
Q |
| |
|
|||||| |
|
|
| T |
45422057 |
acacga |
45422062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 2 - 312
Target Start/End: Original strand, 13550361 - 13550671
Alignment:
| Q |
2 |
taaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaag |
101 |
Q |
| |
|
||||||||| |||||| ||| ||||||||| ||||||||||| ||||||||| |||||||||||| | ||||||||||||||||||||||||| | |||| |
|
|
| T |
13550361 |
taaagccctgcactcctctagcaagtcctcatcccactgccataacctacgtctccacctccacacatccccccactgctccgaatcaacagaaagcaag |
13550460 |
T |
|
| Q |
102 |
tctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaacaacg |
201 |
Q |
| |
|
|| ||||| | ||| |||||||||||||||||||||||| || || || | |||| || |||| | ||||||| ||||||||| |||||||| | | |
|
|
| T |
13550461 |
tccgccacgaatatagacttattctctgttaactcaaacaaccgactaaacctcacacgaagaggagcctcccctatccacctatcgaaccaaaatgatg |
13550560 |
T |
|
| Q |
202 |
tattagctccatctccaaccctcctagccacaagatcaccaaaccatcccctctctccagcaccatcactacccctaagacgactcacctccctccacca |
301 |
Q |
| |
|
||| || ||||| ||||| ||||| ||| |||| ||||||| || || | ||| ||||| | |||||||||||||||||||||||| |||||| |
|
|
| T |
13550561 |
tatctgccccatcaccaactctcctcaacacctgatcctcaaaccagccgctaccaccaacaccaaccctacccctaagacgactcacctccgaccacca |
13550660 |
T |
|
| Q |
302 |
acacgaaactc |
312 |
Q |
| |
|
||| ||||||| |
|
|
| T |
13550661 |
acaagaaactc |
13550671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 26894516 - 26894320
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaa |
100 |
Q |
| |
|
|||||||||||||||| ||| ||| ||||||||||||||||| ||||||||| |||||||||||| ||||||| |||||||| ||||||| | ||| |
|
|
| T |
26894516 |
gtaaagccctacactcatctagcaactcctcctcccactgccataacctacgtctccacctccacaccttcccccaccgctccgaagcaacagagagcaa |
26894417 |
T |
|
| Q |
101 |
gtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaac |
197 |
Q |
| |
|
||| | ||||||||| |||||||||||||||||||||||| || | || || ||||||| |||| | ||||||| ||||||||| |||||||| |
|
|
| T |
26894416 |
gtcggtgacagacatagacttattctctgttaactcaaacaaccgcctaaaccgcacacaaagaggagcctcccctatccacctatcagaccaaaac |
26894320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 26899955 - 26899759
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaa |
100 |
Q |
| |
|
|||||||||||||||| ||| ||| ||||||||||||||||| ||||||||| |||||||||||| ||||||| |||||||| ||||||| | ||| |
|
|
| T |
26899955 |
gtaaagccctacactcatctagcaactcctcctcccactgccataacctacgtctccacctccacaccttcccccaccgctccgaagcaacagagagcaa |
26899856 |
T |
|
| Q |
101 |
gtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaac |
197 |
Q |
| |
|
||| | ||||||||| |||||||||||||||||||||||| || | || || ||||||| |||| | ||||||| ||||||||| |||||||| |
|
|
| T |
26899855 |
gtcggtgacagacatagacttattctctgttaactcaaacaaccgcctaaaccgcacacaaagaggagcctcccctatccacctatcagaccaaaac |
26899759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 43627735 - 43627875
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaa |
100 |
Q |
| |
|
|||||||||||||||| ||| ||| ||||||||||||||||| ||||||||| |||||||||||| |||||||| ||||||||||| ||| | ||| |
|
|
| T |
43627735 |
gtaaagccctacactcatctagcaactcctcctcccactgccataacctacgtctccacctccacacctccccccacctctccgaatcaatagagagcaa |
43627834 |
T |
|
| Q |
101 |
gtctgccacagacataaacttattctctgttaactcaaaca |
141 |
Q |
| |
|
||| ||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
43627835 |
gtcggccacgaacatagacttattctctgttaactcaaaca |
43627875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 70 - 312
Target Start/End: Original strand, 13550882 - 13551124
Alignment:
| Q |
70 |
ccccccactgctccgaatcaacagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaac |
169 |
Q |
| |
|
||||||||||||||||||||||||| | |||||| ||||| | ||| |||||||||||||||||||||||| || || || | |||| || |||| | |
|
|
| T |
13550882 |
ccccccactgctccgaatcaacagaaagcaagtccgccacgaatatagacttattctctgttaactcaaacaaccgactaaacctcacacgaagaggagc |
13550981 |
T |
|
| Q |
170 |
atcccctaaccacctatccaaccaaaacaacgtattagctccatctccaaccctcctagccacaagatcaccaaaccatcccctctctccagcaccatca |
269 |
Q |
| |
|
||||||| ||||||||| |||||||| | |||| || ||||| ||||| ||||| ||| |||| ||||||| || || | ||| ||||| | |
|
|
| T |
13550982 |
ctcccctatccacctatcgaaccaaaatgatgtatctgccccatcaccaactctcctcaacacctgatcctcaaaccagccgctaccaccaacaccaacc |
13551081 |
T |
|
| Q |
270 |
ctacccctaagacgactcacctccctccaccaacacgaaactc |
312 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
13551082 |
ctacccctaagacgactcacctccgaccaccaacaagaaactc |
13551124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 31085541 - 31085452
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaa |
90 |
Q |
| |
|
|||||||||||||||| ||||||| |||||||||||||| |||||||| | | |||||||||||| | ||||||||||||| ||||||| |
|
|
| T |
31085541 |
gtaaagccctacactctgctaacagctcctcctcccactgtcacaacctgcatctccacctccacacatccccccactgctctgaatcaa |
31085452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 33548108 - 33548197
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaa |
90 |
Q |
| |
|
|||||||||||||||| ||| ||| ||||||||||||||||| ||||||||| |||||||||||| |||||||| |||||||||||| |
|
|
| T |
33548108 |
gtaaagccctacactcatctagcaactcctcctcccactgccataacctacgtctccacctccacacctccccccaccgctccgaatcaa |
33548197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 36804148 - 36804196
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacct |
49 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
36804148 |
gtaaagccctacactcctctaacaagtcctcctcccacgcccacaacct |
36804196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22052863 - 22052916
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgta |
54 |
Q |
| |
|
||||||||||||||||| ||| ||| ||||||||||||||||| ||||| |||| |
|
|
| T |
22052863 |
gtaaagccctacactcctctagcaactcctcctcccactgccataacctgcgta |
22052916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 36804363 - 36804400
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccac |
38 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
36804363 |
gtaaagccctacactcctctaacaagtcctcctcccac |
36804400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 26679225 - 26679266
Alignment:
| Q |
155 |
gacacaaaaaggaacatcccctaaccacctatccaaccaaaa |
196 |
Q |
| |
|
|||||||||||||||||| || | |||||||||||||||||| |
|
|
| T |
26679225 |
gacacaaaaaggaacatcaccaacccacctatccaaccaaaa |
26679266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 40176905 - 40176941
Alignment:
| Q |
2 |
taaagccctacactccgctaacaagtcctcctcccac |
38 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
40176905 |
taaagccctacactcctctaccaagtcctcctcccac |
40176941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 104; Significance: 7e-52; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 312
Target Start/End: Original strand, 26205584 - 26205895
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaa |
100 |
Q |
| |
|
||||||||||||||||| ||| ||| ||||||||||||||||| |||||||||||||||||||||||| |||||||| ||| ||||||||||||| ||| |
|
|
| T |
26205584 |
gtaaagccctacactcctctagcaactcctcctcccactgccataacctacgtatccacctccacaaatccccccaccgctttgaatcaacagatagcaa |
26205683 |
T |
|
| Q |
101 |
gtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaacaac |
200 |
Q |
| |
|
||| ||||| |||||||||||||||| |||||||||||||| || || || | |||| || |||| | |||| || ||||||||| ||||||||| | |
|
|
| T |
26205684 |
gtccgccacggacataaacttattctttgttaactcaaacaaccgactaaacctcacacgaagaggagcctcccttatccacctatcgaaccaaaacgat |
26205783 |
T |
|
| Q |
201 |
gtattagctccatctccaaccctcctagccacaagatcaccaaaccatcccctctctccagcaccatcactacccctaagacgactcacctccctccacc |
300 |
Q |
| |
|
|||| ||| |||| ||||| ||||| ||| |||| |||||| || || | ||| ||||| | |||||||||||||||||||||||| ||||| |
|
|
| T |
26205784 |
gtatcagcctcatcaccaactctcctcaacacctgatccttaaaccaaccgctaccaccaacaccaaccctacccctaagacgactcacctccgaccacc |
26205883 |
T |
|
| Q |
301 |
aacacgaaactc |
312 |
Q |
| |
|
|||| ||||||| |
|
|
| T |
26205884 |
aacaagaaactc |
26205895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 312
Target Start/End: Original strand, 25318090 - 25318401
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaa |
100 |
Q |
| |
|
||||||||||||||||| ||| ||| ||||||||||||||||| |||||||||||||||||||||||| |||||||| ||| ||||||||||||| ||| |
|
|
| T |
25318090 |
gtaaagccctacactcctctagcaactcctcctcccactgccataacctacgtatccacctccacaaatccccccaccgctttgaatcaacagatagcaa |
25318189 |
T |
|
| Q |
101 |
gtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaacaac |
200 |
Q |
| |
|
||| ||||| |||||||||||||||| |||||||||||||| || || || | |||| || |||| | |||| || ||||||||| ||||||||| | |
|
|
| T |
25318190 |
gtccgccacggacataaacttattctttgttaactcaaacaaccgactaaacctcacacgaagaggagcctcccttatccacctatcgaaccaaaacgat |
25318289 |
T |
|
| Q |
201 |
gtattagctccatctccaaccctcctagccacaagatcaccaaaccatcccctctctccagcaccatcactacccctaagacgactcacctccctccacc |
300 |
Q |
| |
|
|||| ||| |||| ||||| ||||| ||| |||| |||||| || || | ||| ||||| | |||| ||||||||||||||||||| ||||| |
|
|
| T |
25318290 |
gtatcagcctcatcaccaactctcctcaacacctgatccttaaaccaaccgctaccaccaacaccaaccctacacctaagacgactcacctccgaccacc |
25318389 |
T |
|
| Q |
301 |
aacacgaaactc |
312 |
Q |
| |
|
|||| ||||||| |
|
|
| T |
25318390 |
aacaagaaactc |
25318401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 23347371 - 23347175
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaa |
100 |
Q |
| |
|
|||||||||||||||| ||| ||| ||||||||||||||||| ||||||||| |||||||||||| |||||||| |||||||||||||||| | ||| |
|
|
| T |
23347371 |
gtaaagccctacactcatctagcaactcctcctcccactgccataacctacgtctccacctccacacctccccccaccgctccgaatcaacagagagcaa |
23347272 |
T |
|
| Q |
101 |
gtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaac |
197 |
Q |
| |
|
||| || || |||||| |||||||||||||||||||||||| || | || || ||||||| |||| | ||||||| ||||||||| |||||||| |
|
|
| T |
23347271 |
gtcggcgacggacatagacttattctctgttaactcaaacaaccgcctaaaccgcacacaaagaggagcctcccctatccacctatcagaccaaaac |
23347175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 15674061 - 15674205
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaacc----ccccactgctccgaatcaacagata |
96 |
Q |
| |
|
|||||||||| ||||| ||| ||| ||||||||||||||||||||||||||| |||||||||||| || ||||| |||| ||||||||||| | |
|
|
| T |
15674061 |
gtaaagccctgcactcatctagcaactcctcctcccactgccacaacctacgtctccacctccacacctccccggccccaacgctctgaatcaacagaga |
15674160 |
T |
|
| Q |
97 |
acaagtctgccacagacataaacttattctctgttaactcaaaca |
141 |
Q |
| |
|
||||| |||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
15674161 |
gtaagtcggccacagacatagacttattctccgttaactcaaaca |
15674205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 33630334 - 33630378
Alignment:
| Q |
2 |
taaagccctacactccgctaacaagtcctcctcccactgccacaa |
46 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
33630334 |
taaagccctacactccgctaacatctcctcctcccactgccacaa |
33630378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0418 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0418
Description:
Target: scaffold0418; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 7911 - 8088
Alignment:
| Q |
1 |
gtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtatccacctccacaaaaccccccactgctccgaatcaacagataacaa |
100 |
Q |
| |
|
|||||||| |||||||| |||||| |||||||||||||||||||| ||||| |||||||||| |||| |||| ||||||| |||||||||| ||||| |
|
|
| T |
7911 |
gtaaagccatacactccactaacatctcctcctcccactgccacaatctacgcctccacctccaaaaaaacccctgctgctccaaatcaacagagaacaa |
8010 |
T |
|
| Q |
101 |
gtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaa |
178 |
Q |
| |
|
|||||||| |||||| | |||||||||| |||||||||||| ||||| ||||||||||| || |||||||||||||| |
|
|
| T |
8011 |
gtctgccatagacatgagcttattctctattaactcaaacaatctacgaaaacggacacagaacggaacatcccctaa |
8088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0418; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 310
Target Start/End: Original strand, 8102 - 8149
Alignment:
| Q |
262 |
caccatcactacccctaagacgactcacctccctccaccaacacgaaac |
310 |
Q |
| |
|
||||| ||||| |||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
8102 |
caccaccactatccctaatacgactcacctccc-ccaccaacacgaaac |
8149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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