View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7302_high_9 (Length: 241)
Name: NF7302_high_9
Description: NF7302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7302_high_9 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 38765604 - 38765828
Alignment:
| Q |
1 |
ttttctgattgatcaattagttaattggtaccaacttataatatcaatattacttactgacattcttctttttctcattttaattcttttctttactcaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38765604 |
ttttctgattgatcaattagttaattggtaccaacttataatatcaatattacttactgacattcttctttttctcattttaattcttttctttactcaa |
38765703 |
T |
|
| Q |
101 |
ccagacttttatcataaaaggttacccttcaaagctgctactcacaactcttcaatgttccttaagctcaattcagtctttagtcgtagccttggcagta |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||| |
|
|
| T |
38765704 |
ccagacttttatcataaaaggttacccttcaaagctgctactcacaactcttcaatgtttcttaagctcaattcagtctttagtcgtagcgttggctgta |
38765803 |
T |
|
| Q |
201 |
gaaagagactttgaacaatggaaat |
225 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
38765804 |
gaaagagactttgaacaatggaaat |
38765828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University