View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7302_low_13 (Length: 231)

Name: NF7302_low_13
Description: NF7302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7302_low_13
NF7302_low_13
[»] chr1 (52 HSPs)
chr1 (1-148)||(8447940-8448083)
chr1 (147-191)||(8447852-8447896)
chr1 (188-231)||(38713614-38713657)
chr1 (190-231)||(8411704-8411745)
chr1 (190-231)||(8447780-8447821)
chr1 (190-231)||(9008269-9008310)
chr1 (190-231)||(21486303-21486344)
chr1 (190-231)||(33054074-33054115)
chr1 (190-231)||(34040486-34040527)
chr1 (190-231)||(44632572-44632613)
chr1 (190-231)||(44789129-44789170)
chr1 (190-231)||(47214252-47214293)
chr1 (190-231)||(47721453-47721494)
chr1 (190-231)||(47728445-47728486)
chr1 (190-231)||(48220130-48220171)
chr1 (190-231)||(52362526-52362567)
chr1 (151-191)||(33358073-33358113)
chr1 (192-231)||(4514442-4514481)
chr1 (192-231)||(16986982-16987021)
chr1 (188-231)||(35539343-35539386)
chr1 (188-231)||(36577396-36577439)
chr1 (147-190)||(45383880-45383923)
chr1 (192-231)||(49241493-49241532)
chr1 (193-231)||(8200119-8200157)
chr1 (190-228)||(29586040-29586078)
chr1 (157-191)||(36494567-36494601)
chr1 (153-191)||(36673649-36673687)
chr1 (190-231)||(49931597-49931639)
chr1 (190-228)||(50882096-50882134)
chr1 (190-231)||(756900-756941)
chr1 (190-231)||(902682-902723)
chr1 (190-231)||(7128162-7128203)
chr1 (190-231)||(10890032-10890073)
chr1 (190-231)||(13489706-13489747)
chr1 (190-231)||(18336190-18336231)
chr1 (190-231)||(19969548-19969589)
chr1 (190-231)||(32915058-32915099)
chr1 (190-231)||(33024557-33024598)
chr1 (190-231)||(37588661-37588702)
chr1 (190-231)||(38303674-38303715)
chr1 (190-231)||(45417816-45417857)
chr1 (190-231)||(46911337-46911378)
chr1 (190-231)||(50433813-50433854)
chr1 (190-231)||(50781556-50781597)
chr1 (190-231)||(51286353-51286394)
chr1 (138-190)||(4469330-4469382)
chr1 (151-191)||(8200191-8200231)
chr1 (151-191)||(10889961-10890001)
chr1 (151-191)||(29147789-29147829)
chr1 (147-191)||(47721525-47721569)
chr1 (147-191)||(47728517-47728561)
chr1 (190-230)||(48624921-48624961)
[»] chr7 (25 HSPs)
chr7 (190-231)||(3293173-3293214)
chr7 (190-231)||(4713617-4713658)
chr7 (190-231)||(11564937-11564978)
chr7 (190-231)||(35452559-35452600)
chr7 (190-231)||(39231714-39231755)
chr7 (190-231)||(43573529-43573570)
chr7 (190-231)||(47078237-47078278)
chr7 (151-191)||(7817752-7817792)
chr7 (154-190)||(47500725-47500761)
chr7 (151-190)||(4713690-4713729)
chr7 (188-231)||(11352958-11353001)
chr7 (147-190)||(16980413-16980456)
chr7 (190-228)||(3343316-3343354)
chr7 (190-228)||(21023103-21023141)
chr7 (190-228)||(33180696-33180734)
chr7 (190-231)||(13729770-13729811)
chr7 (190-231)||(21559842-21559883)
chr7 (190-231)||(28036788-28036829)
chr7 (190-231)||(29162962-29163003)
chr7 (190-231)||(40353308-40353349)
chr7 (194-231)||(41458640-41458677)
chr7 (190-231)||(44184545-44184586)
chr7 (190-231)||(46532546-46532587)
chr7 (190-231)||(46812891-46812932)
chr7 (151-191)||(42926255-42926295)
[»] chr4 (49 HSPs)
chr4 (190-231)||(31076098-31076139)
chr4 (188-231)||(32696225-32696268)
chr4 (188-231)||(43769755-43769798)
chr4 (190-231)||(12112671-12112712)
chr4 (157-190)||(12799831-12799864)
chr4 (190-231)||(21617227-21617268)
chr4 (190-231)||(28458363-28458404)
chr4 (190-231)||(28657427-28657468)
chr4 (190-231)||(30079890-30079931)
chr4 (190-231)||(30170006-30170047)
chr4 (147-191)||(21172396-21172440)
chr4 (151-191)||(43769827-43769867)
chr4 (192-228)||(48335601-48335637)
chr4 (152-191)||(12138969-12139008)
chr4 (188-231)||(22819693-22819736)
chr4 (151-190)||(39344895-39344934)
chr4 (188-231)||(45851804-45851847)
chr4 (147-190)||(53299304-53299347)
chr4 (190-228)||(9118850-9118888)
chr4 (189-231)||(14527688-14527730)
chr4 (157-191)||(17475992-17476026)
chr4 (190-228)||(26206963-26207001)
chr4 (181-231)||(52846204-52846254)
chr4 (190-231)||(624298-624339)
chr4 (194-231)||(6494883-6494920)
chr4 (190-231)||(14451437-14451478)
chr4 (190-231)||(23822231-23822272)
chr4 (190-231)||(31657690-31657731)
chr4 (190-231)||(33860691-33860731)
chr4 (190-231)||(38338908-38338949)
chr4 (190-231)||(39344966-39345007)
chr4 (190-231)||(41082362-41082403)
chr4 (190-231)||(41486129-41486170)
chr4 (153-190)||(42959389-42959426)
chr4 (190-231)||(51194313-51194354)
chr4 (190-231)||(51852120-51852161)
chr4 (190-231)||(51887707-51887748)
chr4 (190-231)||(53654736-53654777)
chr4 (151-191)||(1815916-1815956)
chr4 (191-231)||(4949550-4949589)
chr4 (147-191)||(4949621-4949665)
chr4 (147-191)||(9362590-9362634)
chr4 (147-190)||(13263308-13263352)
chr4 (188-228)||(25318049-25318089)
chr4 (151-191)||(26718484-26718524)
chr4 (151-191)||(26731112-26731152)
chr4 (190-226)||(45143657-45143693)
chr4 (190-226)||(45152426-45152462)
chr4 (190-230)||(51573618-51573658)
[»] chr2 (48 HSPs)
chr2 (190-231)||(433894-433935)
chr2 (188-231)||(18723638-18723681)
chr2 (181-231)||(23352882-23352932)
chr2 (151-192)||(7648504-7648545)
chr2 (190-231)||(9377500-9377541)
chr2 (190-231)||(25881588-25881629)
chr2 (190-231)||(26206891-26206932)
chr2 (190-231)||(28245772-28245813)
chr2 (190-231)||(34119638-34119679)
chr2 (190-231)||(36802940-36802981)
chr2 (190-231)||(39449103-39449144)
chr2 (190-231)||(40937050-40937091)
chr2 (190-231)||(42678793-42678834)
chr2 (188-228)||(6940990-6941030)
chr2 (147-191)||(9377572-9377616)
chr2 (151-191)||(36211975-36212015)
chr2 (147-190)||(1836130-1836173)
chr2 (147-190)||(12498549-12498591)
chr2 (152-191)||(15245675-15245714)
chr2 (188-231)||(32869870-32869913)
chr2 (152-191)||(36517312-36517351)
chr2 (185-231)||(3012827-3012873)
chr2 (152-190)||(11167434-11167472)
chr2 (190-231)||(18876907-18876949)
chr2 (181-231)||(22525971-22526021)
chr2 (157-191)||(42866866-42866900)
chr2 (190-231)||(2221037-2221078)
chr2 (190-231)||(2841878-2841919)
chr2 (190-231)||(4758625-4758666)
chr2 (190-231)||(4952466-4952507)
chr2 (190-231)||(6999054-6999095)
chr2 (190-231)||(12889818-12889859)
chr2 (190-231)||(13347801-13347842)
chr2 (190-231)||(15269905-15269946)
chr2 (190-231)||(18176984-18177025)
chr2 (190-231)||(26277139-26277180)
chr2 (190-231)||(39213756-39213797)
chr2 (190-231)||(42866794-42866835)
chr2 (190-231)||(43513456-43513497)
chr2 (151-191)||(5054724-5054764)
chr2 (192-228)||(5200213-5200249)
chr2 (151-191)||(23352822-23352862)
chr2 (151-191)||(34119567-34119607)
chr2 (151-191)||(34431744-34431784)
chr2 (147-191)||(35589298-35589342)
chr2 (188-228)||(35705541-35705581)
chr2 (151-191)||(37105754-37105794)
chr2 (147-191)||(40936975-40937019)
[»] scaffold0532 (2 HSPs)
scaffold0532 (151-191)||(11080-11120)
scaffold0532 (190-231)||(11008-11049)
[»] chr8 (31 HSPs)
chr8 (188-231)||(30135999-30136042)
chr8 (151-190)||(30439421-30439460)
chr8 (188-231)||(42569713-42569756)
chr8 (190-228)||(18651417-18651455)
chr8 (190-231)||(1633876-1633917)
chr8 (190-231)||(11017849-11017890)
chr8 (190-231)||(29991456-29991497)
chr8 (190-231)||(30439492-30439533)
chr8 (190-231)||(34718159-34718200)
chr8 (190-231)||(38234051-38234092)
chr8 (190-231)||(41159875-41159916)
chr8 (190-231)||(45529232-45529273)
chr8 (147-191)||(12366959-12367003)
chr8 (151-191)||(42110098-42110138)
chr8 (151-190)||(8645281-8645320)
chr8 (152-191)||(31597064-31597103)
chr8 (190-228)||(6991794-6991832)
chr8 (190-228)||(9549185-9549223)
chr8 (157-191)||(14707264-14707298)
chr8 (190-228)||(33589216-33589254)
chr8 (190-224)||(40739898-40739932)
chr8 (190-231)||(4994425-4994466)
chr8 (190-231)||(7473012-7473053)
chr8 (190-231)||(7592893-7592934)
chr8 (190-231)||(7955993-7956034)
chr8 (190-231)||(16327138-16327179)
chr8 (190-231)||(16613678-16613719)
chr8 (190-231)||(16966829-16966870)
chr8 (191-228)||(41521015-41521052)
chr8 (192-228)||(5864250-5864286)
chr8 (151-191)||(7478895-7478935)
[»] chr6 (22 HSPs)
chr6 (189-231)||(15318173-15318215)
chr6 (190-228)||(26832693-26832731)
chr6 (190-231)||(868938-868979)
chr6 (190-231)||(2075437-2075478)
chr6 (190-231)||(4820295-4820336)
chr6 (190-231)||(6531169-6531210)
chr6 (190-227)||(22341160-22341197)
chr6 (190-231)||(30036780-30036821)
chr6 (190-231)||(30152516-30152557)
chr6 (190-231)||(33421804-33421845)
chr6 (190-228)||(11547515-11547553)
chr6 (190-231)||(32459502-32459544)
chr6 (157-190)||(335178-335211)
chr6 (190-231)||(13143368-13143409)
chr6 (190-231)||(14699650-14699691)
chr6 (190-231)||(18141287-18141328)
chr6 (190-231)||(20822854-20822895)
chr6 (190-227)||(32046746-32046783)
chr6 (190-231)||(35213547-35213588)
chr6 (151-191)||(5028181-5028221)
chr6 (151-191)||(6531095-6531135)
chr6 (151-191)||(35213476-35213516)
[»] chr5 (31 HSPs)
chr5 (190-231)||(4430922-4430963)
chr5 (190-231)||(8267806-8267847)
chr5 (190-231)||(15267828-15267869)
chr5 (190-231)||(18842307-18842348)
chr5 (190-231)||(20770175-20770216)
chr5 (190-231)||(30640834-30640875)
chr5 (190-231)||(35098991-35099032)
chr5 (190-231)||(41175692-41175733)
chr5 (147-191)||(3640108-3640152)
chr5 (151-191)||(15952960-15953000)
chr5 (151-191)||(41175621-41175661)
chr5 (192-231)||(1839333-1839372)
chr5 (192-231)||(3640185-3640224)
chr5 (192-231)||(39628833-39628872)
chr5 (190-228)||(15478705-15478743)
chr5 (190-231)||(189689-189730)
chr5 (190-231)||(2688972-2689013)
chr5 (190-231)||(4098655-4098696)
chr5 (190-231)||(5042292-5042333)
chr5 (190-231)||(6292165-6292206)
chr5 (190-231)||(6517756-6517797)
chr5 (190-231)||(9581623-9581664)
chr5 (190-231)||(19481168-19481209)
chr5 (194-231)||(19839976-19840013)
chr5 (157-190)||(35098926-35098959)
chr5 (190-231)||(37700504-37700545)
chr5 (190-231)||(43196611-43196652)
chr5 (190-231)||(43441782-43441823)
chr5 (151-191)||(9226416-9226456)
chr5 (151-191)||(10649551-10649591)
chr5 (191-231)||(21064213-21064253)
[»] chr3 (33 HSPs)
chr3 (190-231)||(8821674-8821715)
chr3 (190-231)||(11633657-11633698)
chr3 (190-231)||(26996360-26996401)
chr3 (190-231)||(32421615-32421656)
chr3 (190-231)||(37927191-37927232)
chr3 (190-231)||(49761351-49761392)
chr3 (151-191)||(9158788-9158828)
chr3 (147-191)||(33795636-33795680)
chr3 (190-228)||(8846538-8846576)
chr3 (190-228)||(32767723-32767761)
chr3 (190-228)||(33375907-33375945)
chr3 (157-191)||(35201461-35201495)
chr3 (190-228)||(44677470-44677508)
chr3 (147-189)||(51343526-51343568)
chr3 (190-231)||(390853-390894)
chr3 (190-231)||(10206959-10207000)
chr3 (190-231)||(21196168-21196209)
chr3 (194-231)||(24095396-24095433)
chr3 (190-231)||(24482949-24482990)
chr3 (190-231)||(30909073-30909114)
chr3 (190-231)||(31376751-31376792)
chr3 (190-231)||(37508484-37508525)
chr3 (190-231)||(39697208-39697249)
chr3 (190-231)||(43905017-43905058)
chr3 (190-231)||(46019506-46019547)
chr3 (190-231)||(49363237-49363278)
chr3 (190-231)||(49417619-49417660)
chr3 (190-231)||(50206956-50206997)
chr3 (190-231)||(55400043-55400084)
chr3 (188-228)||(16675510-16675550)
chr3 (151-191)||(21005091-21005131)
chr3 (151-191)||(46852047-46852087)
chr3 (147-191)||(49761423-49761467)
[»] scaffold0204 (1 HSPs)
scaffold0204 (192-228)||(23123-23159)
[»] scaffold0687 (1 HSPs)
scaffold0687 (190-231)||(2241-2282)


Alignment Details
Target: chr1 (Bit Score: 131; Significance: 4e-68; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 8448083 - 8447940
Alignment:
Q  1 ctgatgtattgggtgaagaagagcagcatgcatggaggtgattcattgtcctttaggagattcttagaatttgggttggggtgtgcttgttgtaaatttc 100  Q
    ||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8448083 ctgatgtattgggtgaagaagagcagcatg----gaggtgattcattgtcctttaggagattcttagaatttgggttggggtgtgcttgttgtaaatttc 8447988  T
Q  101 tttttaagtagtatagattctctgaggatatatgaaaaaataattgtt 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8447987 tttttaagtagtatagattctctgaggatatatgaaaaaataattgtt 8447940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 8447896 - 8447852
Alignment:
Q  147 tttagttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  8447896 tttagttgataacttatgtgacaatcataatttacaaagaaaaag 8447852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 231
Target Start/End: Complemental strand, 38713657 - 38713614
Alignment:
Q  188 aaagagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||||| || ||||||||||||||||||||    
T  38713657 aaagagataaagtaaaaaataatatgaatatgagagagaaagtt 38713614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 8411704 - 8411745
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  8411704 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 8411745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 8447821 - 8447780
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    ||||||||||||||||||||||||| ||| ||||||||||||    
T  8447821 agagataaagtaaaaaatgatgtgagtataagagagaaagtt 8447780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 9008310 - 9008269
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  9008310 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 9008269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 21486303 - 21486344
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  21486303 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 21486344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 33054074 - 33054115
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  33054074 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 33054115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 34040486 - 34040527
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  34040486 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 34040527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 44632613 - 44632572
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  44632613 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 44632572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 44789129 - 44789170
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    ||||||||||||||||||||||||| ||||| ||||||||||    
T  44789129 agagataaagtaaaaaatgatgtgagtatgaaagagaaagtt 44789170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 47214293 - 47214252
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  47214293 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 47214252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 47721494 - 47721453
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||||||||||| ||||||||    
T  47721494 agagataaagtaaaaaataatgtgaatatgagacagaaagtt 47721453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 47728486 - 47728445
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||||||||||| ||||||||    
T  47728486 agagataaagtaaaaaataatgtgaatatgagacagaaagtt 47728445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 48220130 - 48220171
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  48220130 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 48220171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 52362567 - 52362526
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  52362567 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 52362526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 33358073 - 33358113
Alignment:
Q  151 gttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    ||||| |||||||||||||| ||||||||||||||||||||    
T  33358073 gttgacaacttatgtgacaaccataatttacaaagaaaaag 33358113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 231
Target Start/End: Original strand, 4514442 - 4514481
Alignment:
Q  192 agataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| |||||||||||||| ||||||||    
T  4514442 agataaagtaaaaaataatgtgaatatgagatagaaagtt 4514481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 231
Target Start/End: Complemental strand, 16987021 - 16986982
Alignment:
Q  192 agataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| |||||| ||||||||||||||||    
T  16987021 agataaagtaaaaaataatgtgagtatgagagagaaagtt 16986982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 231
Target Start/End: Original strand, 35539343 - 35539386
Alignment:
Q  188 aaagagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||||| |||||||||| |||| |||||||    
T  35539343 aaagagataaagtaaaaaataatgtgaatataagagtgaaagtt 35539386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 231
Target Start/End: Original strand, 36577396 - 36577439
Alignment:
Q  188 aaagagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| | |||||| ||||||||||||||||    
T  36577396 aaagagataaagtaaaaagtaatgtgagtatgagagagaaagtt 36577439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 190
Target Start/End: Original strand, 45383880 - 45383923
Alignment:
Q  147 tttagttgataacttatgtgacaatcataatttacaaagaaaaa 190  Q
    ||||||||||||||||||  | ||||||||||||||||||||||    
T  45383880 tttagttgataacttatgaaataatcataatttacaaagaaaaa 45383923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 231
Target Start/End: Original strand, 49241493 - 49241532
Alignment:
Q  192 agataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| |||||| ||||||||||||||||    
T  49241493 agataaagtaaaaaataatgtgagtatgagagagaaagtt 49241532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 231
Target Start/End: Complemental strand, 8200157 - 8200119
Alignment:
Q  193 gataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  8200157 gataaagtaaaaaataatgtgagtatgagagagaaagtt 8200119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 228
Target Start/End: Complemental strand, 29586078 - 29586040
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaa 228  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  29586078 agagataaagtaaaaaataatgtgagtatgagagagaaa 29586040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 191
Target Start/End: Complemental strand, 36494601 - 36494567
Alignment:
Q  157 aacttatgtgacaatcataatttacaaagaaaaag 191  Q
    ||||||| |||||||||||||||||||||||||||    
T  36494601 aacttatttgacaatcataatttacaaagaaaaag 36494567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 36673649 - 36673687
Alignment:
Q  153 tgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  36673649 tgataacttatttgacaaccataatttacaaagaaaaag 36673687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 49931639 - 49931597
Alignment:
Q  190 agagataaagtaaaaa-atgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| || |||||||||||||||||||||||    
T  49931639 agagataaagtaaaaatataatgtgaatatgagagagaaagtt 49931597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 228
Target Start/End: Original strand, 50882096 - 50882134
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaa 228  Q
    |||||||||||||||||| |||| |||||||||||||||    
T  50882096 agagataaagtaaaaaataatgtaaatatgagagagaaa 50882134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 756941 - 756900
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||| ||||||||    
T  756941 agagataaagtaaaaaataatgtgagtatgagaaagaaagtt 756900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 902723 - 902682
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  902723 agagataaagtaaaaagtaatgtgagtatgagagagaaagtt 902682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 7128203 - 7128162
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||| ||||| ||||||||||||||||| |||||    
T  7128203 agagataaagtagaaaataatgtgaatatgagagaggaagtt 7128162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 10890032 - 10890073
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  10890032 agagataaagtaaaaagtaatgtgagtatgagagagaaagtt 10890073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 13489747 - 13489706
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  13489747 agagataaagtaaaaagtaatgtgagtatgagagagaaagtt 13489706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 18336231 - 18336190
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  18336231 agagataaagtaaaaactaatgtgagtatgagagagaaagtt 18336190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 19969548 - 19969589
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  19969548 agagataaagtaaaaagtaatgtgagtatgagagagaaagtt 19969589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 32915058 - 32915099
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  32915058 agagataaagtaaaaagtaatgtgagtatgagagagaaagtt 32915099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 33024557 - 33024598
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||| ||||||| |||||| ||||||||||||||||    
T  33024557 agagataaagaaaaaaataatgtgagtatgagagagaaagtt 33024598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 37588661 - 37588702
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||| ||||||||||    
T  37588661 agagataaagtaaaaaattatgtgagtatgaaagagaaagtt 37588702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 38303674 - 38303715
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| ||| || ||||||||||||||||    
T  38303674 agagataaagtaaaaaataatgcgagtatgagagagaaagtt 38303715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 45417857 - 45417816
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    ||||||||| ||||||||||||||| ||||||| ||||||||    
T  45417857 agagataaattaaaaaatgatgtgagtatgagaaagaaagtt 45417816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 46911378 - 46911337
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    ||||||||||||||||||||||||| ||||| ||| ||||||    
T  46911378 agagataaagtaaaaaatgatgtgagtatgaaagaaaaagtt 46911337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 50433854 - 50433813
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||| ||||||||||||    
T  50433854 agagataaagtaaaaaattatgtgagtataagagagaaagtt 50433813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 50781556 - 50781597
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  50781556 agagataaagtaaaaagtaatgtgagtatgagagagaaagtt 50781597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 51286353 - 51286394
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    ||||||||| |||||||| |||||| ||||||||||||||||    
T  51286353 agagataaaataaaaaataatgtgagtatgagagagaaagtt 51286394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 4469330 - 4469382
Alignment:
Q  138 aaataattgtttagttgataacttatgtgacaatcataatttacaaagaaaaa 190  Q
    |||||||| ||| ||||| ||| |||  |||||||||||||||||||||||||    
T  4469330 aaataattatttggttgacaacgtataagacaatcataatttacaaagaaaaa 4469382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 8200231 - 8200191
Alignment:
Q  151 gttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    ||||| |||||||| ||||| ||||||||||||||||||||    
T  8200231 gttgacaacttatgggacaaccataatttacaaagaaaaag 8200191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 10889961 - 10890001
Alignment:
Q  151 gttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    ||||| ||||| |||||||| ||||||||||||||||||||    
T  10889961 gttgacaacttttgtgacaaccataatttacaaagaaaaag 10890001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 29147789 - 29147829
Alignment:
Q  151 gttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    |||||||| ||||||||||| |||||||||||||| |||||    
T  29147789 gttgataatttatgtgacaaccataatttacaaaggaaaag 29147829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 47721569 - 47721525
Alignment:
Q  147 tttagttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    |||||| || |||||||| ||||| ||||||||||||||||||||    
T  47721569 tttagtggacaacttatgggacaaccataatttacaaagaaaaag 47721525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 47728561 - 47728517
Alignment:
Q  147 tttagttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    |||||| || |||||||| ||||| ||||||||||||||||||||    
T  47728561 tttagtggacaacttatgggacaaccataatttacaaagaaaaag 47728517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 230
Target Start/End: Complemental strand, 48624961 - 48624921
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagt 230  Q
    |||||||||||||||||| |||||| ||| |||||||||||    
T  48624961 agagataaagtaaaaaataatgtgagtataagagagaaagt 48624921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000001; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 3293214 - 3293173
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  3293214 agagataaagtaaaaaattatgtgaatatgagagagaaagtt 3293173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 4713658 - 4713617
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||||| ||||||||||||||    
T  4713658 agagataaagtaaaaaataatgtgaatttgagagagaaagtt 4713617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 11564978 - 11564937
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  11564978 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 11564937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 35452559 - 35452600
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  35452559 agagataaagtaaaaaattatgtgagtatgagagagaaagtt 35452600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 39231714 - 39231755
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  39231714 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 39231755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 43573529 - 43573570
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||||||||||||||||||||    
T  43573529 agagataaagtaaaaagtaatgtgaatatgagagagaaagtt 43573570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 47078237 - 47078278
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  47078237 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 47078278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 7817792 - 7817752
Alignment:
Q  151 gttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    ||||| |||||||||||||| ||||||||||||||||||||    
T  7817792 gttgacaacttatgtgacaaccataatttacaaagaaaaag 7817752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 47500761 - 47500725
Alignment:
Q  154 gataacttatgtgacaatcataatttacaaagaaaaa 190  Q
    ||||||||||| |||||||||||||||||||||||||    
T  47500761 gataacttatgcgacaatcataatttacaaagaaaaa 47500725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 190
Target Start/End: Complemental strand, 4713729 - 4713690
Alignment:
Q  151 gttgataacttatgtgacaatcataatttacaaagaaaaa 190  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  4713729 gttgacaacttatgtgacaaccataatttacaaagaaaaa 4713690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 231
Target Start/End: Original strand, 11352958 - 11353001
Alignment:
Q  188 aaagagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| | |||||| ||||||||||||||||    
T  11352958 aaagagataaagtaaaaagtaatgtgagtatgagagagaaagtt 11353001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 190
Target Start/End: Complemental strand, 16980456 - 16980413
Alignment:
Q  147 tttagttgataacttatgtgacaatcataatttacaaagaaaaa 190  Q
    ||||||||| ||||| || |||||||||||||||||||||||||    
T  16980456 tttagttgacaacttttgagacaatcataatttacaaagaaaaa 16980413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 228
Target Start/End: Original strand, 3343316 - 3343354
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaa 228  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  3343316 agagataaagtaaaaagtaatgtgaatatgagagagaaa 3343354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 228
Target Start/End: Original strand, 21023103 - 21023141
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaa 228  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  21023103 agagataaagtaaaaaataatgtgaatatgaaagagaaa 21023141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 228
Target Start/End: Original strand, 33180696 - 33180734
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaa 228  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  33180696 agagataaagtaaaaaataatgtgagtatgagagagaaa 33180734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 13729811 - 13729770
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||| ||||||||    
T  13729811 agagataaagtaaaaaataatgtgagtatgagaaagaaagtt 13729770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 21559883 - 21559842
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||| ||||||    
T  21559883 agagataaagtaaaaaataatgtgagtatgagagataaagtt 21559842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 28036829 - 28036788
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||| ||||||||||||    
T  28036829 agagataaagtaaaaaataatgtgagtataagagagaaagtt 28036788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 29162962 - 29163003
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  29162962 agagataaagtaaaaagtaatgtgagtatgagagagaaagtt 29163003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 40353349 - 40353308
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    ||||||||| |||||||| |||||| ||||||||||||||||    
T  40353349 agagataaaataaaaaataatgtgagtatgagagagaaagtt 40353308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 231
Target Start/End: Complemental strand, 41458677 - 41458640
Alignment:
Q  194 ataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  41458677 ataaagtaaaaaataatgtgagtatgagagagaaagtt 41458640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 44184545 - 44184586
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  44184545 agagataaagtaaaaagtaatgtgagtatgagagagaaagtt 44184586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 46532587 - 46532546
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| |||||| |||||||||    
T  46532587 agagataaagtaaaaaataatgtgagtatgagtgagaaagtt 46532546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 46812891 - 46812932
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||| ||||| ||||||||||||    
T  46812891 agagataaagtaaaaaataatgtaaatataagagagaaagtt 46812932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 42926295 - 42926255
Alignment:
Q  151 gttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    ||||| || ||||||||||| ||||||||||||||||||||    
T  42926295 gttgacaatttatgtgacaaccataatttacaaagaaaaag 42926255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000001; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 31076139 - 31076098
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  31076139 agagataaagtaaaaaatgatgtgagtatgagagagaaagtt 31076098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 231
Target Start/End: Complemental strand, 32696268 - 32696225
Alignment:
Q  188 aaagagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||||  |||||||||||||||||||||||    
T  32696268 aaagagataaagtaaaaaacaatgtgaatatgagagagaaagtt 32696225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 231
Target Start/End: Complemental strand, 43769798 - 43769755
Alignment:
Q  188 aaagagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||||| |||||| ||||||||||||||||    
T  43769798 aaagagataaagtaaaaaataatgtgagtatgagagagaaagtt 43769755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 12112712 - 12112671
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| || ||||||||||||||||||||    
T  12112712 agagataaagtaaaaaataatatgaatatgagagagaaagtt 12112671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 190
Target Start/End: Complemental strand, 12799864 - 12799831
Alignment:
Q  157 aacttatgtgacaatcataatttacaaagaaaaa 190  Q
    ||||||||||||||||||||||||||||||||||    
T  12799864 aacttatgtgacaatcataatttacaaagaaaaa 12799831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 21617268 - 21617227
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  21617268 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 21617227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 28458363 - 28458404
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  28458363 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 28458404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 28657427 - 28657468
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  28657427 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 28657468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 30079931 - 30079890
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  30079931 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 30079890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 30170006 - 30170047
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  30170006 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 30170047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 21172440 - 21172396
Alignment:
Q  147 tttagttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    |||||||||||| ||||| || |||||||||||||||||||||||    
T  21172440 tttagttgataatttatgggataatcataatttacaaagaaaaag 21172396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 43769867 - 43769827
Alignment:
Q  151 gttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    |||||||||||||| ||||| ||||||||||||||||||||    
T  43769867 gttgataacttatgcgacaaccataatttacaaagaaaaag 43769827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 228
Target Start/End: Complemental strand, 48335637 - 48335601
Alignment:
Q  192 agataaagtaaaaaatgatgtgaatatgagagagaaa 228  Q
    |||||||||||||||| ||||||||||||||||||||    
T  48335637 agataaagtaaaaaataatgtgaatatgagagagaaa 48335601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 191
Target Start/End: Complemental strand, 12139008 - 12138969
Alignment:
Q  152 ttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    |||||||||||||| |||| ||||||||||||||||||||    
T  12139008 ttgataacttatgtaacaaccataatttacaaagaaaaag 12138969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 231
Target Start/End: Complemental strand, 22819736 - 22819693
Alignment:
Q  188 aaagagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| | |||||| ||||||||||||||||    
T  22819736 aaagagataaagtaaaaagtaatgtgagtatgagagagaaagtt 22819693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 190
Target Start/End: Original strand, 39344895 - 39344934
Alignment:
Q  151 gttgataacttatgtgacaatcataatttacaaagaaaaa 190  Q
    ||||||||||| || |||||||||||||||||||||||||    
T  39344895 gttgataacttttgagacaatcataatttacaaagaaaaa 39344934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 231
Target Start/End: Complemental strand, 45851847 - 45851804
Alignment:
Q  188 aaagagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    ||||||||||||||||||||||||||| ||||| ||| ||||||    
T  45851847 aaagagataaagtaaaaaatgatgtgagtatgaaagaaaaagtt 45851804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 190
Target Start/End: Complemental strand, 53299347 - 53299304
Alignment:
Q  147 tttagttgataacttatgtgacaatcataatttacaaagaaaaa 190  Q
    ||||||||||||||||| |||||| ||| |||||||||||||||    
T  53299347 tttagttgataacttatatgacaagcatgatttacaaagaaaaa 53299304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 228
Target Start/End: Original strand, 9118850 - 9118888
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaa 228  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  9118850 agagataaagtaaaaaataatgtgattatgagagagaaa 9118888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 231
Target Start/End: Complemental strand, 14527730 - 14527688
Alignment:
Q  189 aagagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    ||||||||||||||||||| |||||| |||||||| |||||||    
T  14527730 aagagataaagtaaaaaataatgtgagtatgagagtgaaagtt 14527688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 191
Target Start/End: Complemental strand, 17476026 - 17475992
Alignment:
Q  157 aacttatgtgacaatcataatttacaaagaaaaag 191  Q
    ||||||| |||||||||||||||||||||||||||    
T  17476026 aacttatttgacaatcataatttacaaagaaaaag 17475992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 228
Target Start/End: Original strand, 26206963 - 26207001
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaa 228  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  26206963 agagataaagtaaaaagtaatgtgaatatgagagagaaa 26207001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 231
Target Start/End: Original strand, 52846204 - 52846254
Alignment:
Q  181 caaagaaaaagagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    ||||| || |||||||||||||||| | |||||| ||||||||||||||||    
T  52846204 caaagcaatagagataaagtaaaaagtaatgtgagtatgagagagaaagtt 52846254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 624298 - 624339
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  624298 agagataaagtaaaaagtaatgtgagtatgagagagaaagtt 624339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 231
Target Start/End: Original strand, 6494883 - 6494920
Alignment:
Q  194 ataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||| || ||||||||||||||||||||    
T  6494883 ataaagtaaaaaataatatgaatatgagagagaaagtt 6494920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 14451478 - 14451437
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  14451478 agagataaagtaaaaactaatgtgagtatgagagagaaagtt 14451437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 23822231 - 23822272
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| || |||||||||| |||||||||    
T  23822231 agagataaagtaaaaaataatatgaatatgagggagaaagtt 23822272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 31657731 - 31657690
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  31657731 agagataaagtaaaaagtaatgtgagtatgagagagaaagtt 31657690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 33860731 - 33860691
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| |||||||| ||||||||||||||||    
T  33860731 agagataaagtaaaaa-tgatgtgagtatgagagagaaagtt 33860691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 38338908 - 38338949
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  38338908 agagataaagtaaaaagtaatgtgagtatgagagagaaagtt 38338949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 39344966 - 39345007
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  39344966 agagataaagtaaaaagtaatgtgagtatgagagagaaagtt 39345007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 41082403 - 41082362
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    ||||||||||| |||||| |||||| ||||||||||||||||    
T  41082403 agagataaagtgaaaaataatgtgagtatgagagagaaagtt 41082362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 41486129 - 41486170
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  41486129 agagataaagtaaaaagtaatgtgagtatgagagagaaagtt 41486170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 42959426 - 42959389
Alignment:
Q  153 tgataacttatgtgacaatcataatttacaaagaaaaa 190  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  42959426 tgataacttatttgacaatcatattttacaaagaaaaa 42959389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 51194354 - 51194313
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| |||||||| ||||| ||||||||||    
T  51194354 agagataaagtaaaaagtgatgtgagtatgaaagagaaagtt 51194313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 51852161 - 51852120
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| ||||||||||| |||| ||||||    
T  51852161 agagataaagtaaaaaataatgtgaatatgggagaaaaagtt 51852120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 51887748 - 51887707
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| || ||| ||||||||||||||||    
T  51887748 agagataaagtaaaaaataatttgagtatgagagagaaagtt 51887707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 53654736 - 53654777
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| || ||||||||| ||||||||||    
T  53654736 agagataaagtaaaaaataatatgaatatgaaagagaaagtt 53654777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 1815916 - 1815956
Alignment:
Q  151 gttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    ||||| |||||||||||||  ||||||||||||||||||||    
T  1815916 gttgacaacttatgtgacagccataatttacaaagaaaaag 1815956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 231
Target Start/End: Complemental strand, 4949589 - 4949550
Alignment:
Q  191 gagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    ||||||||||||||| |||||||| ||||||||||||||||    
T  4949589 gagataaagtaaaaa-tgatgtgagtatgagagagaaagtt 4949550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 4949665 - 4949621
Alignment:
Q  147 tttagttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    ||||||||| |||||||| |||||  |||||||||||||||||||    
T  4949665 tttagttgacaacttatgcgacaactataatttacaaagaaaaag 4949621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 9362590 - 9362634
Alignment:
Q  147 tttagttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    ||||||||||||||| |||||||| |||| |||| ||||||||||    
T  9362590 tttagttgataacttttgtgacaaccatagtttataaagaaaaag 9362634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 190
Target Start/End: Original strand, 13263308 - 13263352
Alignment:
Q  147 tttagttgataacttatgtg-acaatcataatttacaaagaaaaa 190  Q
    |||||||||||||||||| | ||||||||||||| ||||||||||    
T  13263308 tttagttgataacttatggggacaatcataatttgcaaagaaaaa 13263352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 228
Target Start/End: Original strand, 25318049 - 25318089
Alignment:
Q  188 aaagagataaagtaaaaaatgatgtgaatatgagagagaaa 228  Q
    |||||||||||||||||||| || ||| |||||||||||||    
T  25318049 aaagagataaagtaaaaaataatatgagtatgagagagaaa 25318089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 26718524 - 26718484
Alignment:
Q  151 gttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    |||||||| || || ||||||||||||||||||||||||||    
T  26718524 gttgataatttttgggacaatcataatttacaaagaaaaag 26718484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 26731152 - 26731112
Alignment:
Q  151 gttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    |||||||| || || ||||||||||||||||||||||||||    
T  26731152 gttgataatttttgggacaatcataatttacaaagaaaaag 26731112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 45143657 - 45143693
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagaga 226  Q
    |||||||||||||||||| |||||| |||||||||||    
T  45143657 agagataaagtaaaaaataatgtgattatgagagaga 45143693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 45152426 - 45152462
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagaga 226  Q
    |||||||||||||||||| |||||| |||||||||||    
T  45152426 agagataaagtaaaaaataatgtgattatgagagaga 45152462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 230
Target Start/End: Original strand, 51573618 - 51573658
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagt 230  Q
    |||||||||||||||||| |||||| ||||| |||||||||    
T  51573618 agagataaagtaaaaaataatgtgagtatgaaagagaaagt 51573658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000001; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 433935 - 433894
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  433935 agagataaagtaaaaaatgatgtgagtatgagagagaaagtt 433894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 231
Target Start/End: Complemental strand, 18723681 - 18723638
Alignment:
Q  188 aaagagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||||| |||||| ||||||||||||||||    
T  18723681 aaagagataaagtaaaaaataatgtgagtatgagagagaaagtt 18723638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 231
Target Start/End: Original strand, 23352882 - 23352932
Alignment:
Q  181 caaagaaaaagagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    ||||| || |||||||||||||||||| |||||| ||||||||||||||||    
T  23352882 caaagcaatagagataaagtaaaaaataatgtgagtatgagagagaaagtt 23352932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 7648545 - 7648504
Alignment:
Q  151 gttgataacttatgtgacaatcataatttacaaagaaaaaga 192  Q
    ||||||||||||||  ||||||||||||||||||||||||||    
T  7648545 gttgataacttatgcaacaatcataatttacaaagaaaaaga 7648504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 9377541 - 9377500
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||||||||||||||||||||    
T  9377541 agagataaagtaaaaagtaatgtgaatatgagagagaaagtt 9377500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 25881629 - 25881588
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  25881629 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 25881588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 26206932 - 26206891
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  26206932 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 26206891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 28245813 - 28245772
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  28245813 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 28245772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 34119638 - 34119679
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  34119638 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 34119679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 36802981 - 36802940
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  36802981 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 36802940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 39449103 - 39449144
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    ||||||||||||||||||||||||| ||||| ||||||||||    
T  39449103 agagataaagtaaaaaatgatgtgagtatgaaagagaaagtt 39449144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 40937050 - 40937091
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  40937050 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 40937091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 42678834 - 42678793
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  42678834 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 42678793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 6941030 - 6940990
Alignment:
Q  188 aaagagataaagtaaaaaatgatgtgaatatgagagagaaa 228  Q
    ||||||||||||||||||||||||||||||| ||| |||||    
T  6941030 aaagagataaagtaaaaaatgatgtgaatataagaaagaaa 6940990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 9377616 - 9377572
Alignment:
Q  147 tttagttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    ||||||||| |||||||| |||| |||||||||||||||||||||    
T  9377616 tttagttgacaacttatgagacagtcataatttacaaagaaaaag 9377572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 36211975 - 36212015
Alignment:
Q  151 gttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    |||||||| ||||||||||||||||||||| ||||||||||    
T  36211975 gttgataaattatgtgacaatcataatttataaagaaaaag 36212015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 190
Target Start/End: Complemental strand, 1836173 - 1836130
Alignment:
Q  147 tttagttgataacttatgtgacaatcataatttacaaagaaaaa 190  Q
    |||||||||||| ||||| ||||| |||||||||||||||||||    
T  1836173 tttagttgataaattatgagacaaccataatttacaaagaaaaa 1836130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 190
Target Start/End: Original strand, 12498549 - 12498591
Alignment:
Q  147 tttagttgataacttatgtgacaatcataatttacaaagaaaaa 190  Q
    ||||||||| || |||||||||||||||||||||||||||||||    
T  12498549 tttagttgacaa-ttatgtgacaatcataatttacaaagaaaaa 12498591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 191
Target Start/End: Original strand, 15245675 - 15245714
Alignment:
Q  152 ttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    |||| |||||||| ||||||||||||||||||||||||||    
T  15245675 ttgacaacttatgagacaatcataatttacaaagaaaaag 15245714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 231
Target Start/End: Complemental strand, 32869913 - 32869870
Alignment:
Q  188 aaagagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||||| |||| ||||||| ||||||||||    
T  32869913 aaagagataaagtaaaaaataatgtaaatatgaaagagaaagtt 32869870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 191
Target Start/End: Complemental strand, 36517351 - 36517312
Alignment:
Q  152 ttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  36517351 ttgataacttttgggacaatcataatttacaaagaaaaag 36517312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 231
Target Start/End: Original strand, 3012827 - 3012873
Alignment:
Q  185 gaaaaagagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||| |||||||||||||||||| |||| | ||||||||||||||||    
T  3012827 gaaatagagataaagtaaaaaataatgtaagtatgagagagaaagtt 3012873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 190
Target Start/End: Original strand, 11167434 - 11167472
Alignment:
Q  152 ttgataacttatgtgacaatcataatttacaaagaaaaa 190  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  11167434 ttgataacttatgtaacaaccataatttacaaagaaaaa 11167472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 18876907 - 18876949
Alignment:
Q  190 agagataaagtaaaaaa-tgatgtgaatatgagagagaaagtt 231  Q
    ||||||||||||||||| | |||||||||||||||||||||||    
T  18876907 agagataaagtaaaaaaattatgtgaatatgagagagaaagtt 18876949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 231
Target Start/End: Original strand, 22525971 - 22526021
Alignment:
Q  181 caaagaaaaagagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    ||||| || |||||||||||||||||| |||||||||| | ||||||||||    
T  22525971 caaagcaatagagataaagtaaaaaataatgtgaatataaaagagaaagtt 22526021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 191
Target Start/End: Complemental strand, 42866900 - 42866866
Alignment:
Q  157 aacttatgtgacaatcataatttacaaagaaaaag 191  Q
    |||||| ||||||||||||||||||||||||||||    
T  42866900 aacttacgtgacaatcataatttacaaagaaaaag 42866866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 2221078 - 2221037
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    ||||||||||| |||||| |||||| ||||||||||||||||    
T  2221078 agagataaagtgaaaaataatgtgagtatgagagagaaagtt 2221037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 2841919 - 2841878
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||| ||||||||    
T  2841919 agagataaagtaaaaaataatgtgagtatgagaaagaaagtt 2841878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 4758625 - 4758666
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    ||||||||| |||||||| |||||||||||| ||||||||||    
T  4758625 agagataaaataaaaaataatgtgaatatgaaagagaaagtt 4758666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 4952466 - 4952507
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||||||||| | ||||||||    
T  4952466 agagataaagtaaaaaataatgtgaatatgaaatagaaagtt 4952507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 6999054 - 6999095
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  6999054 agagataaagtaaaaagtaatgtgagtatgagagagaaagtt 6999095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 12889818 - 12889859
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    ||||||||| |||||||| |||||| ||||||||||||||||    
T  12889818 agagataaattaaaaaataatgtgagtatgagagagaaagtt 12889859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 13347801 - 13347842
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  13347801 agagataaagtaaaaagtaatgtgagtatgagagagaaagtt 13347842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 15269946 - 15269905
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||||||||| ||||||||||    
T  15269946 agagataaagtaaaaagtaatgtgaatatgaaagagaaagtt 15269905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 18177025 - 18176984
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||| ||||||| |||||| ||||||||||||||||    
T  18177025 agagataaagaaaaaaataatgtgagtatgagagagaaagtt 18176984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 26277180 - 26277139
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||| ||||||||||||    
T  26277180 agagataaagtaaaaaataatgtgagtataagagagaaagtt 26277139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 39213756 - 39213797
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||| ||||||    
T  39213756 agagataaagtaaaaaataatgtgagtatgagagataaagtt 39213797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 42866835 - 42866794
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||| ||||||    
T  42866835 agagataaagtaaaaaataatgtgagtatgagagaaaaagtt 42866794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 43513497 - 43513456
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||||| |||| ||||| ||||||||||    
T  43513497 agagataaagtaaaaaatgacgtgagtatgaaagagaaagtt 43513456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 5054764 - 5054724
Alignment:
Q  151 gttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    ||||| ||||||||||||||  |||||||||||||||||||    
T  5054764 gttgacaacttatgtgacaacaataatttacaaagaaaaag 5054724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 228
Target Start/End: Original strand, 5200213 - 5200249
Alignment:
Q  192 agataaagtaaaaaatgatgtgaatatgagagagaaa 228  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  5200213 agataaagtaaaaaatgatgtaaatatgatagagaaa 5200249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 23352822 - 23352862
Alignment:
Q  151 gttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    ||||| |||||||| ||||| ||||||||||||||||||||    
T  23352822 gttgacaacttatgggacaaccataatttacaaagaaaaag 23352862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 34119567 - 34119607
Alignment:
Q  151 gttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    ||||| |||||||| |||| |||||||||||||||||||||    
T  34119567 gttgacaacttatgagacactcataatttacaaagaaaaag 34119607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 34431744 - 34431784
Alignment:
Q  151 gttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    |||||||||||| ||||||| ||||| ||||||||||||||    
T  34431744 gttgataacttacgtgacaaccataacttacaaagaaaaag 34431784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 35589298 - 35589342
Alignment:
Q  147 tttagttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    |||||||||||| || || ||||| ||||||||||||||||||||    
T  35589298 tttagttgataatttttgggacaaccataatttacaaagaaaaag 35589342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 35705581 - 35705541
Alignment:
Q  188 aaagagataaagtaaaaaatgatgtgaatatgagagagaaa 228  Q
    ||||||||||||||||| || |||||| |||||||||||||    
T  35705581 aaagagataaagtaaaatataatgtgagtatgagagagaaa 35705541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 37105794 - 37105754
Alignment:
Q  151 gttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    ||||| ||||| |||||||| ||||||||||||||||||||    
T  37105794 gttgacaacttttgtgacaaccataatttacaaagaaaaag 37105754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 40936975 - 40937019
Alignment:
Q  147 tttagttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    ||||| ||| || ||||||||||| ||||||||||||||||||||    
T  40936975 tttagctgacaatttatgtgacaaccataatttacaaagaaaaag 40937019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0532 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 11120 - 11080
Alignment:
Q  151 gttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  11120 gttgacaacttatgtgacaatcataatttacaaagaaaaag 11080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0532; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 11049 - 11008
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  11049 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 11008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 231
Target Start/End: Original strand, 30135999 - 30136042
Alignment:
Q  188 aaagagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| | |||||||||||||||||||||||    
T  30135999 aaagagataaagtaaaaagtaatgtgaatatgagagagaaagtt 30136042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 190
Target Start/End: Original strand, 30439421 - 30439460
Alignment:
Q  151 gttgataacttatgtgacaatcataatttacaaagaaaaa 190  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  30439421 gttgataacttatgtgacaaccataatttacaaagaaaaa 30439460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 231
Target Start/End: Original strand, 42569713 - 42569756
Alignment:
Q  188 aaagagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| | |||||||||||||||||||||||    
T  42569713 aaagagataaagtaaaaagtaatgtgaatatgagagagaaagtt 42569756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 190 - 228
Target Start/End: Complemental strand, 18651455 - 18651417
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaa 228  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  18651455 agagataaagtaaaaaatgatgtgagtatgagagagaaa 18651417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 1633876 - 1633917
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  1633876 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 1633917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 11017890 - 11017849
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  11017890 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 11017849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 29991497 - 29991456
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    ||||||||||||||||||||||||| ||||| ||||||||||    
T  29991497 agagataaagtaaaaaatgatgtgagtatgaaagagaaagtt 29991456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 30439492 - 30439533
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  30439492 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 30439533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 34718200 - 34718159
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  34718200 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 34718159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 38234092 - 38234051
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  38234092 agagataaagtaaaaaattatgtgagtatgagagagaaagtt 38234051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 41159875 - 41159916
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  41159875 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 41159916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 45529232 - 45529273
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  45529232 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 45529273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 12366959 - 12367003
Alignment:
Q  147 tttagttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    ||||||||||||||||| |||||| ||||||||| ||||||||||    
T  12366959 tttagttgataacttatctgacaaccataatttataaagaaaaag 12367003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 42110098 - 42110138
Alignment:
Q  151 gttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    ||||| |||||||||||| ||||||||||||||||||||||    
T  42110098 gttgacaacttatgtgacgatcataatttacaaagaaaaag 42110138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 190
Target Start/End: Complemental strand, 8645320 - 8645281
Alignment:
Q  151 gttgataacttatgtgacaatcataatttacaaagaaaaa 190  Q
    ||||||||||||||||| ||||||| ||||||||||||||    
T  8645320 gttgataacttatgtgataatcatattttacaaagaaaaa 8645281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 191
Target Start/End: Complemental strand, 31597103 - 31597064
Alignment:
Q  152 ttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  31597103 ttgataacttttgagacaatcataatttacaaagaaaaag 31597064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 228
Target Start/End: Original strand, 6991794 - 6991832
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaa 228  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  6991794 agagataaagtaaaaaataatgtgagtatgagagagaaa 6991832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 228
Target Start/End: Original strand, 9549185 - 9549223
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaa 228  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  9549185 agagataaagtaaaaaataatgtgagtatgagagagaaa 9549223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 191
Target Start/End: Original strand, 14707264 - 14707298
Alignment:
Q  157 aacttatgtgacaatcataatttacaaagaaaaag 191  Q
    |||||||| ||||||||||||||||||||||||||    
T  14707264 aacttatgagacaatcataatttacaaagaaaaag 14707298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 228
Target Start/End: Original strand, 33589216 - 33589254
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaa 228  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  33589216 agagataaagtaaaaaataatgtgagtatgagagagaaa 33589254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 224
Target Start/End: Original strand, 40739898 - 40739932
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagaga 224  Q
    |||||||||||||||||| ||||||||||||||||    
T  40739898 agagataaagtaaaaaataatgtgaatatgagaga 40739932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 4994466 - 4994425
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||| ||||||    
T  4994466 agagataaagtaaaaaataatgtgagtatgagagataaagtt 4994425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 7473012 - 7473053
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  7473012 agagataaagtaaaaagtaatgtgagtatgagagagaaagtt 7473053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 7592934 - 7592893
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||| ||||||    
T  7592934 agagataaagtaaaaaataatgtgactatgagagataaagtt 7592893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 7955993 - 7956034
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  7955993 agagataaagtaaaaagtaatgtgagtatgagagagaaagtt 7956034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 16327138 - 16327179
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  16327138 agagataaagtaaaaagtaatgtgagtatgagagagaaagtt 16327179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 16613719 - 16613678
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||| ||||||    
T  16613719 agagataaagtaaaaaataatgtgagtatgagagaaaaagtt 16613678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 16966870 - 16966829
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||| ||||| |||||| ||||||||||||||||    
T  16966870 agagataaagtagaaaataatgtgagtatgagagagaaagtt 16966829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 228
Target Start/End: Complemental strand, 41521052 - 41521015
Alignment:
Q  191 gagataaagtaaaaaatgatgtgaatatgagagagaaa 228  Q
    ||||||||||||||||| |||||| |||||||||||||    
T  41521052 gagataaagtaaaaaataatgtgagtatgagagagaaa 41521015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 228
Target Start/End: Complemental strand, 5864286 - 5864250
Alignment:
Q  192 agataaagtaaaaaatgatgtgaatatgagagagaaa 228  Q
    |||||||||||||||| |||||| |||||||||||||    
T  5864286 agataaagtaaaaaataatgtgattatgagagagaaa 5864250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 7478935 - 7478895
Alignment:
Q  151 gttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    ||||| ||| ||| |||||||||||||||||||||||||||    
T  7478935 gttgacaacctatttgacaatcataatttacaaagaaaaag 7478895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.00000000008; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 189 - 231
Target Start/End: Original strand, 15318173 - 15318215
Alignment:
Q  189 aagagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    ||||||||||||||| ||| |||||||||||||||||||||||    
T  15318173 aagagataaagtaaataataatgtgaatatgagagagaaagtt 15318215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 190 - 228
Target Start/End: Complemental strand, 26832731 - 26832693
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaa 228  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  26832731 agagataaagtaaaaaatgatgtgagtatgagagagaaa 26832693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 868938 - 868979
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| || ||||||||||||||||||||    
T  868938 agagataaagtaaaaaataatatgaatatgagagagaaagtt 868979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 2075437 - 2075478
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  2075437 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 2075478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 4820336 - 4820295
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  4820336 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 4820295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 6531169 - 6531210
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  6531169 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 6531210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 22341160 - 22341197
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaa 227  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  22341160 agagataaagtaaaaaatgatgtgagtatgagagagaa 22341197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 30036780 - 30036821
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  30036780 agagataaagtaaaaaattatgtgattatgagagagaaagtt 30036821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 30152516 - 30152557
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  30152516 agagataaagtaaaaaattatgtgagtatgagagagaaagtt 30152557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 33421845 - 33421804
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    ||||||||||||||||||||||||| ||||| ||||||||||    
T  33421845 agagataaagtaaaaaatgatgtgagtatgaaagagaaagtt 33421804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 228
Target Start/End: Original strand, 11547515 - 11547553
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaa 228  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  11547515 agagataaagtaaaaaataatgtgagtatgagagagaaa 11547553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 32459502 - 32459544
Alignment:
Q  190 agagataaagtaaaaaa-tgatgtgaatatgagagagaaagtt 231  Q
    ||||||||||||||||| | |||||||||||||||||||||||    
T  32459502 agagataaagtaaaaaagtaatgtgaatatgagagagaaagtt 32459544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 190
Target Start/End: Complemental strand, 335211 - 335178
Alignment:
Q  157 aacttatgtgacaatcataatttacaaagaaaaa 190  Q
    ||||||| ||||||||||||||||||||||||||    
T  335211 aacttatttgacaatcataatttacaaagaaaaa 335178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 13143368 - 13143409
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  13143368 agagataaagtaaaaagtaatgtgagtatgagagagaaagtt 13143409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 14699650 - 14699691
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||| ||||||||    
T  14699650 agagataaagtaaaaaataatgtgagtatgagaaagaaagtt 14699691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 18141287 - 18141328
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  18141287 agagataaagtaaaaagtaatgtgagtatgagagagaaagtt 18141328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 20822854 - 20822895
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  20822854 agagataaagtaaaaagtaatgtgagtatgagagagaaagtt 20822895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 227
Target Start/End: Complemental strand, 32046783 - 32046746
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaa 227  Q
    |||||||||||||||||| |||||| ||||||||||||    
T  32046783 agagataaagtaaaaaataatgtgagtatgagagagaa 32046746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 35213547 - 35213588
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  35213547 agagataaagtaaaaagtaatgtgagtatgagagagaaagtt 35213588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 5028181 - 5028221
Alignment:
Q  151 gttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    |||||||||||||| ||||| ||||||||| ||||||||||    
T  5028181 gttgataacttatgagacaaccataatttataaagaaaaag 5028221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 6531095 - 6531135
Alignment:
Q  151 gttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    |||||||||| ||| ||||| ||||||||||||||||||||    
T  6531095 gttgataactaatgggacaaccataatttacaaagaaaaag 6531135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 35213476 - 35213516
Alignment:
Q  151 gttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    ||||| ||||| || ||||||||||||||||||||||||||    
T  35213476 gttgacaacttttgggacaatcataatttacaaagaaaaag 35213516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000003; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 4430922 - 4430963
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    ||||||||||||||||||||||||| ||||||||| ||||||    
T  4430922 agagataaagtaaaaaatgatgtgagtatgagagaaaaagtt 4430963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 8267806 - 8267847
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  8267806 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 8267847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 15267869 - 15267828
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| || ||||||||||||||||||||    
T  15267869 agagataaagtaaaaaataatatgaatatgagagagaaagtt 15267828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 18842307 - 18842348
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  18842307 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 18842348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 20770216 - 20770175
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  20770216 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 20770175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 30640875 - 30640834
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  30640875 agagataaagtaaaaaataatgtaaatatgagagagaaagtt 30640834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 35098991 - 35099032
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  35098991 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 35099032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 41175692 - 41175733
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  41175692 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 41175733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 3640108 - 3640152
Alignment:
Q  147 tttagttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    ||||||||| |||||||||||||| ||||||||| ||||||||||    
T  3640108 tttagttgacaacttatgtgacaaccataatttataaagaaaaag 3640152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 15952960 - 15953000
Alignment:
Q  151 gttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    ||||| |||||||||||||| ||||||||||||||||||||    
T  15952960 gttgacaacttatgtgacaaccataatttacaaagaaaaag 15953000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 41175621 - 41175661
Alignment:
Q  151 gttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    ||||| |||||||||||||| ||||||||||||||||||||    
T  41175621 gttgacaacttatgtgacaaccataatttacaaagaaaaag 41175661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 231
Target Start/End: Original strand, 1839333 - 1839372
Alignment:
Q  192 agataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| |||||| ||||||||||||||||    
T  1839333 agataaagtaaaaaataatgtgagtatgagagagaaagtt 1839372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 231
Target Start/End: Original strand, 3640185 - 3640224
Alignment:
Q  192 agataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| |||||| ||||||||||||||||    
T  3640185 agataaagtaaaaaataatgtgagtatgagagagaaagtt 3640224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 231
Target Start/End: Complemental strand, 39628872 - 39628833
Alignment:
Q  192 agataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    ||||||||| |||||| |||||||||||||||||||||||    
T  39628872 agataaagttaaaaataatgtgaatatgagagagaaagtt 39628833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 228
Target Start/End: Complemental strand, 15478743 - 15478705
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaa 228  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  15478743 agagataaagtaaaaaataatgtgagtatgagagagaaa 15478705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 189689 - 189730
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  189689 agagataaagtaaaaagtaatgtgagtatgagagagaaagtt 189730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 2688972 - 2689013
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||| ||||||| ||||||||||    
T  2688972 agagataaagtaaaaaataatgtaaatatgaaagagaaagtt 2689013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 4098696 - 4098655
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    ||||||||||||||| |||| |||||||||||||| ||||||    
T  4098696 agagataaagtaaaatatgacgtgaatatgagagataaagtt 4098655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 5042333 - 5042292
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||| ||||||    
T  5042333 agagataaagtaaaaaataatgtgagtatgagagataaagtt 5042292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 6292206 - 6292165
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||| ||||||||||||    
T  6292206 agagataaagtaaaaaataatgtgagtataagagagaaagtt 6292165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 6517797 - 6517756
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  6517797 agagataaagtaaaaagtaatgtgagtatgagagagaaagtt 6517756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 9581664 - 9581623
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||| ||||||||||    
T  9581664 agagataaagtaaaaaataatgtgagtatgaaagagaaagtt 9581623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 19481168 - 19481209
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  19481168 agagataaagtaaaaagtaatgtgagtatgagagagaaagtt 19481209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 231
Target Start/End: Original strand, 19839976 - 19840013
Alignment:
Q  194 ataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  19839976 ataaagtaaaaaataatgtgagtatgagagagaaagtt 19840013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 190
Target Start/End: Original strand, 35098926 - 35098959
Alignment:
Q  157 aacttatgtgacaatcataatttacaaagaaaaa 190  Q
    ||||||| ||||||||||||||||||||||||||    
T  35098926 aacttatttgacaatcataatttacaaagaaaaa 35098959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 37700545 - 37700504
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||| ||||||||| |||||| ||||||||||||||||    
T  37700545 agagataaggtaaaaaataatgtgagtatgagagagaaagtt 37700504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 43196611 - 43196652
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||| ||||||||    
T  43196611 agagataaagtaaaaaataatgtgagtatgagaaagaaagtt 43196652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 43441823 - 43441782
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  43441823 agagataaagtaaaaagtaatgtgagtatgagagagaaagtt 43441782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 9226456 - 9226416
Alignment:
Q  151 gttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    ||||| ||||| ||||||||| |||||||||||||||||||    
T  9226456 gttgacaacttttgtgacaattataatttacaaagaaaaag 9226416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 10649591 - 10649551
Alignment:
Q  151 gttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    ||||| ||||| |||||||| ||||||||||||||||||||    
T  10649591 gttgacaacttttgtgacaaccataatttacaaagaaaaag 10649551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 231
Target Start/End: Original strand, 21064213 - 21064253
Alignment:
Q  191 gagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    ||||||||||||||| | |||||| ||||||||||||||||    
T  21064213 gagataaagtaaaaagtaatgtgagtatgagagagaaagtt 21064253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000003; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 8821715 - 8821674
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  8821715 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 8821674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 11633698 - 11633657
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||||||||||||||||||||    
T  11633698 agagataaagtaaaaagtaatgtgaatatgagagagaaagtt 11633657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 26996401 - 26996360
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  26996401 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 26996360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 32421615 - 32421656
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    ||||||||||||||||||||| ||| ||||||||||||||||    
T  32421615 agagataaagtaaaaaatgatatgagtatgagagagaaagtt 32421656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 37927191 - 37927232
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  37927191 agagataaagtaaaaaattatgtgagtatgagagagaaagtt 37927232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 49761392 - 49761351
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  49761392 agagataaagtaaaaaataatgtgagtatgagagagaaagtt 49761351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 9158788 - 9158828
Alignment:
Q  151 gttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    ||||| |||||||||||||| ||||||||||||||||||||    
T  9158788 gttgacaacttatgtgacaaccataatttacaaagaaaaag 9158828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 33795636 - 33795680
Alignment:
Q  147 tttagttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    ||||||||| |||||| ||||||| ||||||||||||||||||||    
T  33795636 tttagttgacaacttacgtgacaaccataatttacaaagaaaaag 33795680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 228
Target Start/End: Complemental strand, 8846576 - 8846538
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaa 228  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  8846576 agagataaagtaaaaaataatgtgagtatgagagagaaa 8846538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 228
Target Start/End: Complemental strand, 32767761 - 32767723
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaa 228  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  32767761 agagataaagtaaaaaataatgtgagtatgagagagaaa 32767723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 228
Target Start/End: Complemental strand, 33375945 - 33375907
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaa 228  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  33375945 agagataaagtaaaaaataatgtgagtatgagagagaaa 33375907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 191
Target Start/End: Original strand, 35201461 - 35201495
Alignment:
Q  157 aacttatgtgacaatcataatttacaaagaaaaag 191  Q
    ||||||| |||||||||||||||||||||||||||    
T  35201461 aacttatttgacaatcataatttacaaagaaaaag 35201495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 228
Target Start/End: Original strand, 44677470 - 44677508
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaa 228  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  44677470 agagataaagtaaaaaataatgtgagtatgagagagaaa 44677508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 189
Target Start/End: Complemental strand, 51343568 - 51343526
Alignment:
Q  147 tttagttgataacttatgtgacaatcataatttacaaagaaaa 189  Q
    ||||||||| ||||||||||||| | |||||||||||||||||    
T  51343568 tttagttgacaacttatgtgacatttataatttacaaagaaaa 51343526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 390894 - 390853
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||| ||||||    
T  390894 agagataaagtaaaaaataatgtgagtatgagagaaaaagtt 390853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 10206959 - 10207000
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  10206959 agagataaagtaaaaagtaatgtgagtatgagagagaaagtt 10207000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 21196209 - 21196168
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||| | ||||||||||||||||    
T  21196209 agagataaagtaaaaaataatgtaagtatgagagagaaagtt 21196168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 231
Target Start/End: Original strand, 24095396 - 24095433
Alignment:
Q  194 ataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  24095396 ataaagtaaaaaataatgtgagtatgagagagaaagtt 24095433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 24482949 - 24482990
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  24482949 agagataaagtaaaaagtaatgtgagtatgagagagaaagtt 24482990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 30909114 - 30909073
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||||||| ||||||||||||    
T  30909114 agagataaagtaaaaagtaatgtgaatataagagagaaagtt 30909073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 31376751 - 31376792
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||| ||||||||||    
T  31376751 agagataaagtaaaaaattatgtgagtatgaaagagaaagtt 31376792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 37508484 - 37508525
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  37508484 agagataaagtaaaaagtaatgtgagtatgagagagaaagtt 37508525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 39697208 - 39697249
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  39697208 agagataaagtaaaaagtaatgtgagtatgagagagaaagtt 39697249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 43905058 - 43905017
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  43905058 agagataaagtaaaaagtaatgtgagtatgagagagaaagtt 43905017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 46019547 - 46019506
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  46019547 agagataaagtaaaaagtaatgtgagtatgagagagaaagtt 46019506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 49363237 - 49363278
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  49363237 agagataaagtaaaaagtaatgtgagtatgagagagaaagtt 49363278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 49417660 - 49417619
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    ||||||||| |||||||| |||||| ||||||||||||||||    
T  49417660 agagataaaataaaaaataatgtgagtatgagagagaaagtt 49417619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 50206956 - 50206997
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  50206956 agagataaagtaaaaagtaatgtgagtatgagagagaaagtt 50206997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 55400084 - 55400043
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  55400084 agagataaagtaaaaagtaatgtgagtatgagagagaaagtt 55400043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 228
Target Start/End: Original strand, 16675510 - 16675550
Alignment:
Q  188 aaagagataaagtaaaaaatgatgtgaatatgagagagaaa 228  Q
    |||||||||||||||||| | | ||||||||||||||||||    
T  16675510 aaagagataaagtaaaaagtaacgtgaatatgagagagaaa 16675550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 21005091 - 21005131
Alignment:
Q  151 gttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    ||||||||||| || ||||||||||||||| ||||||||||    
T  21005091 gttgataacttttgggacaatcataatttataaagaaaaag 21005131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 46852047 - 46852087
Alignment:
Q  151 gttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    ||||| ||||| || ||||||||||||||||||||||||||    
T  46852047 gttgacaacttttgggacaatcataatttacaaagaaaaag 46852087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 49761467 - 49761423
Alignment:
Q  147 tttagttgataacttatgtgacaatcataatttacaaagaaaaag 191  Q
    ||||||||| ||||||  |||||||||||||||| ||||||||||    
T  49761467 tttagttgacaacttacatgacaatcataatttataaagaaaaag 49761423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 228
Target Start/End: Complemental strand, 23159 - 23123
Alignment:
Q  192 agataaagtaaaaaatgatgtgaatatgagagagaaa 228  Q
    |||||||||||||||| ||||||||||||||||||||    
T  23159 agataaagtaaaaaataatgtgaatatgagagagaaa 23123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 2282 - 2241
Alignment:
Q  190 agagataaagtaaaaaatgatgtgaatatgagagagaaagtt 231  Q
    |||||||||||||||||| |||||| ||||||||| ||||||    
T  2282 agagataaagtaaaaaataatgtgactatgagagataaagtt 2241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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