View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7303_low_12 (Length: 219)
Name: NF7303_low_12
Description: NF7303
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7303_low_12 |
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Alignment Details
Target: chr2 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 17 - 207
Target Start/End: Complemental strand, 39349570 - 39349380
Alignment:
| Q |
17 |
tcatttatagtgagtttggtacacttttaaagacgaaaaagaaaatatcatgaggaagtttttaatatgttatttgtatagaacttgttgaagctcatta |
116 |
Q |
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| T |
39349570 |
tcatttatagtgagtttggtacacttttaaagacgaaaaagaaaatatcatgaggaagtttttaatatgttatttgtatagaacttgttgaagctcatta |
39349471 |
T |
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| Q |
117 |
attacctgatttcaaccannnnnnnnnnnnnnnnngtagaaatcaaccacttatttttaaacggatatcttaatcaaatggtcacaggttc |
207 |
Q |
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| T |
39349470 |
attacctgatttcaaccattttgttttttggttttgtagaaatcaaccacttatttttaaacggacatcttaatcaaatggtcacatgttc |
39349380 |
T |
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