View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7311_high_40 (Length: 284)
Name: NF7311_high_40
Description: NF7311
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7311_high_40 |
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Alignment Details
Target: chr4 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 18 - 269
Target Start/End: Original strand, 37786674 - 37786927
Alignment:
| Q |
18 |
acctagtattactctcttcattagtttctttatatttt--cttctcttttgctttgtttgaccttaaaatgttgatgcaatgttctgttttgttcaattt |
115 |
Q |
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| T |
37786674 |
acctagtgttactctcttcattagtttctttatattttttcttctcttttgctttgtttgaccttaaaatgttaatgcaatgttctgttttgttcaattt |
37786773 |
T |
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| Q |
116 |
ccaagtttgaaacctagaaacttacaaatttgaatggttcataaatgattccaattcagtgatttcattttcaattgtgtaatttttatcctcggttcaa |
215 |
Q |
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| T |
37786774 |
ccaagtttgaaacctagaaacttacaaatttgaatggttcataaatgattccaattcagtgatttcattttcaattgtgtaatttttatcctcggttcca |
37786873 |
T |
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| Q |
216 |
taataagcaaatcatttgcaaaacaaaattatcccacaaaaattgactcattat |
269 |
Q |
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| T |
37786874 |
taataaacgagtaatttgtaaaacaaaattatcccacaaaaattgactcattat |
37786927 |
T |
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