View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7311_low_16 (Length: 441)

Name: NF7311_low_16
Description: NF7311
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7311_low_16
NF7311_low_16
[»] chr2 (9 HSPs)
chr2 (1-423)||(2662346-2662768)
chr2 (131-243)||(2707324-2707436)
chr2 (131-243)||(2717094-2717206)
chr2 (143-231)||(2698507-2698595)
chr2 (131-243)||(2723716-2723828)
chr2 (108-231)||(2682008-2682131)
chr2 (131-243)||(2745546-2745658)
chr2 (137-243)||(2712576-2712682)
chr2 (145-270)||(2690773-2690898)
[»] chr4 (14 HSPs)
chr4 (74-261)||(31697086-31697273)
chr4 (77-232)||(36370530-36370685)
chr4 (125-243)||(36435789-36435907)
chr4 (143-270)||(14519926-14520053)
chr4 (125-232)||(36399735-36399842)
chr4 (75-233)||(36290549-36290707)
chr4 (125-243)||(36376291-36376409)
chr4 (77-243)||(36429336-36429502)
chr4 (125-232)||(36407192-36407299)
chr4 (125-232)||(36412315-36412422)
chr4 (125-243)||(36419343-36419461)
chr4 (78-255)||(31708183-31708360)
chr4 (182-243)||(36389533-36389594)
chr4 (115-167)||(36437717-36437769)
[»] chr7 (9 HSPs)
chr7 (120-243)||(20263940-20264063)
chr7 (125-243)||(20279449-20279567)
chr7 (125-243)||(20294596-20294714)
chr7 (120-243)||(20243546-20243669)
chr7 (125-243)||(20284879-20284997)
chr7 (120-243)||(20168087-20168210)
chr7 (120-243)||(20231481-20231604)
chr7 (125-243)||(20273745-20273863)
chr7 (121-165)||(20062569-20062613)
[»] chr3 (4 HSPs)
chr3 (134-243)||(3094846-3094955)
chr3 (134-243)||(4548013-4548122)
chr3 (134-225)||(3080427-3080518)
chr3 (115-213)||(3122541-3122639)
[»] chr8 (15 HSPs)
chr8 (126-210)||(15712004-15712088)
chr8 (134-221)||(15692668-15692755)
chr8 (143-243)||(4142879-4142979)
chr8 (132-224)||(15799849-15799941)
chr8 (188-243)||(4150936-4150991)
chr8 (142-224)||(15805391-15805473)
chr8 (142-207)||(15813241-15813306)
chr8 (185-243)||(4120485-4120543)
chr8 (132-210)||(15703721-15703799)
chr8 (127-168)||(19379497-19379538)
chr8 (127-168)||(19526541-19526582)
chr8 (127-168)||(19537435-19537476)
chr8 (142-210)||(15697352-15697420)
chr8 (127-159)||(19289702-19289734)
chr8 (128-168)||(19348431-19348471)
[»] chr1 (2 HSPs)
chr1 (128-228)||(36311356-36311456)
chr1 (134-194)||(47627239-47627299)
[»] chr5 (1 HSPs)
chr5 (73-171)||(28419969-28420067)


Alignment Details
Target: chr2 (Bit Score: 419; Significance: 0; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 419; E-Value: 0
Query Start/End: Original strand, 1 - 423
Target Start/End: Original strand, 2662346 - 2662768
Alignment:
Q  1 atttcagaacatagaataatttagtagttataagatgaaaaaagtttggtaggttaagtcattttgttttagtacttactatgttccaactacccttttg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2662346 atttcagaacatagaataatttagtagttataagatgaaaaaagtttggtaggttaagtcattttgttttagtacttactatgttccaactacccttttg 2662445  T
Q  101 gtcttttcttcagtttgatctccaccaaacattcttgccattccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgctttta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2662446 gtcttttcttcagtttgatctccaccaaacattcttgccattccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgctttta 2662545  T
Q  201 gatctctatgaattattcttagtcttgaatctctatgaagatagacaagtcccctagcaatgccgtcaataatgtctagcctcttttgccaactaagcgc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2662546 gatctctatgaattattcttagtcttgaatctctatgaagatagacaagtcccctagcaatgccgtcaataatgtctagcctcttttgccaactaagcgc 2662645  T
Q  301 agaacgcttggtttcatctgattcagaatattacttgagttataaagtataaaaatgatcaagtaaaatacatgtttgttccaattaacattgtttatgc 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2662646 agaacgcttggtttcatctgattcagaatattacttgagttataaagtataaaaatgatcaagtaaaatacatgtttgttccaattaacattgtttatgc 2662745  T
Q  401 acaattagatgtgacaatgatat 423  Q
    | |||||||||||||||||||||    
T  2662746 ataattagatgtgacaatgatat 2662768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 131 - 243
Target Start/End: Original strand, 2707324 - 2707436
Alignment:
Q  131 attcttgccattccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctctatgaattattcttagtcttgaat 230  Q
    ||||| ||||| ||||| ||||| ||||||||||||| ||| ||||| || |  | ||| ||||  ||||| |||||||| |||||||||| ||||||||    
T  2707324 attctagccatgccaaaatcagatatttttggattcaattctccatccaacaagatattacttggctttaggtctctatgtattattcttaatcttgaat 2707423  T
Q  231 ctctatgaagata 243  Q
    |||||||||||||    
T  2707424 ctctatgaagata 2707436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 131 - 243
Target Start/End: Original strand, 2717094 - 2717206
Alignment:
Q  131 attcttgccattccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctctatgaattattcttagtcttgaat 230  Q
    ||||| ||||| |||||||| || ||||||||||||| ||| ||||| || | || ||| || | |||||| |||||||| |||||||||| ||| ||||    
T  2717094 attctagccatgccaaagtcggatatttttggattcagttctccatccaacaaaatattactcggttttaggtctctatggattattcttaatctcgaat 2717193  T
Q  231 ctctatgaagata 243  Q
    |||||||||||||    
T  2717194 ctctatgaagata 2717206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 143 - 231
Target Start/End: Original strand, 2698507 - 2698595
Alignment:
Q  143 ccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctctatgaattattcttagtcttgaatc 231  Q
    ||||||||||| |||||||||||||| |   ||||||| | ||  || |||||||||||||||| |||||||||||| |||||||||||    
T  2698507 ccaaagtcagatatttttggattcatgttttcatctaacaaaatgttacttgcttttagatctcgatgaattattctgagtcttgaatc 2698595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 131 - 243
Target Start/End: Original strand, 2723716 - 2723828
Alignment:
Q  131 attcttgccattccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctctatgaattattcttagtcttgaat 230  Q
    ||||| ||||| |||||||| || ||||||||||||| ||| ||||| || | || ||| || |  ||||| |||||||| |||||||||| ||| ||||    
T  2723716 attctagccatgccaaagtcggatatttttggattcagttctccatccaacaaaatattactcggctttaggtctctatgtattattcttaatctcgaat 2723815  T
Q  231 ctctatgaagata 243  Q
    |||||||||||||    
T  2723816 ctctatgaagata 2723828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 2682008 - 2682131
Alignment:
Q  108 cttcagtttgatctccaccaaacattcttgccattccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctct 207  Q
    |||||||||||||||  ||||| ||||| ||||| |||||||| || |||||||||||||||| ||| || |  ||||  |||||||| || ||||| ||    
T  2682008 cttcagtttgatctctgccaaatattctagccatcccaaagtctgatatttttggattcattttgccgtcaagtagaatgttgcttgccttgagatccct 2682107  T
Q  208 atgaattattcttagtcttgaatc 231  Q
    ||| || || || |||||||||||    
T  2682108 atggataatcctgagtcttgaatc 2682131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 243
Target Start/End: Original strand, 2745546 - 2745658
Alignment:
Q  131 attcttgccattccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctctatgaattattcttagtcttgaat 230  Q
    ||||| ||||| |||||||  || ||||||||||||| ||| ||||| || | || ||| || |  ||||| |||||||| |||||||||| ||| ||||    
T  2745546 attctagccatgccaaagttggatatttttggattcagttctccatccaacaaaatattactcggctttaggtctctatgtattattcttaatctcgaat 2745645  T
Q  231 ctctatgaagata 243  Q
    |||||||||||||    
T  2745646 ctctatgaagata 2745658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 243
Target Start/End: Original strand, 2712576 - 2712682
Alignment:
Q  137 gccattccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctctatgaattattcttagtcttgaatctctat 236  Q
    ||||| ||||||||||| ||||||||||||||||| ||||| || |  | ||| |  |  || || |||||||| |||||||||| ||||||||||| ||    
T  2712576 gccatgccaaagtcagatatttttggattcatttctccatccaacaagatattaccgggcttaaggtctctatgtattattcttaatcttgaatctcgat 2712675  T
Q  237 gaagata 243  Q
    |||||||    
T  2712676 gaagata 2712682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 2690773 - 2690898
Alignment:
Q  145 aaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctctatgaattattcttagtcttgaatctctatgaagatag 244  Q
    ||||||||| |||||||||||||| |   ||||||| | ||  || |||| |||||||| || |||||||||||| ||||||||||| | ||| |||||     
T  2690773 aaagtcagatatttttggattcatgttttcatctaacaaaatgttacttggttttagatttcgatgaattattctaagtcttgaatcacgatgcagataa 2690872  T
Q  245 acaagtcccctagcaatgccgtcaat 270  Q
    |  ||||| || |||||||| |||||    
T  2690873 agtagtcctcttgcaatgccttcaat 2690898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 1e-20; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 74 - 261
Target Start/End: Complemental strand, 31697273 - 31697086
Alignment:
Q  74 acttactatgttccaactacccttttggtcttttcttcagtttgatctccaccaaacattcttgccattccaaagtcagaaatttttggattcatttcgc 173  Q
    |||||||||||||||||||| || || || ||| ||||| | || ||||| |||||   ||| ||||||||||| || || |||||||||||||  | |     
T  31697273 acttactatgttccaactactctatttgtatttccttcaatctggtctcctccaaaagatctggccattccaaaatctgatatttttggattcaacttgt 31697174  T
Q  174 catctaaaagaacattgcttgcttttagatctctatgaattattcttagtcttgaatctctatgaagatagacaagtcccctagcaat 261  Q
    |||| || |  || || |||||||| |||||||||||||| ||||||| ||  ||||||  ||||||||| |||||||||||||||||    
T  31697173 catccaacaatacgttacttgctttgagatctctatgaataattcttaatcgagaatcttgatgaagatacacaagtcccctagcaat 31697086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 77 - 232
Target Start/End: Complemental strand, 36370685 - 36370530
Alignment:
Q  77 tactatgttccaactacccttttggtcttttcttcagtttgatctccaccaaacattcttgccattccaaagtcagaaatttttggattcatttcgccat 176  Q
    ||||||||||| || || ||||| ||  || ||| | ||| |||| | ||||| ||||| ||||| ||||| || || ||||| |||||||||||  |||    
T  36370685 tactatgttccgaccactctttttgttcttgcttgaatttcatcttctccaaatattctagccataccaaaatctgagattttgggattcatttcagcat 36370586  T
Q  177 ctaaaagaacattgcttgcttttagatctctatgaattattcttagtcttgaatct 232  Q
    | |  ||||||||||| |||||||||||||||||||||||| | || |||||||||    
T  36370585 caaggagaacattgctggcttttagatctctatgaattattttcagccttgaatct 36370530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 36435907 - 36435789
Alignment:
Q  125 ccaaacattcttgccattccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctctatgaattattcttagtc 224  Q
    ||||| ||||| ||||| ||||| || || ||||| ||||||||| |  |||| |  ||||||||||| |||||||||||||||||||||||| | || |    
T  36435907 ccaaatattctagccataccaaaatctgagattttgggattcattgcagcatcaaggagaacattgctggcttttagatctctatgaattattttcagcc 36435808  T
Q  225 ttgaatctctatgaagata 243  Q
    ||||||||  |||||||||    
T  36435807 ttgaatcttgatgaagata 36435789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 270
Target Start/End: Original strand, 14519926 - 14520053
Alignment:
Q  143 ccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctctatgaattattcttagtcttgaatctctatgaagat 242  Q
    ||||||||||| |||||||||||||| |   ||||||| | ||  || |||| ||||||||||| |||||||||||| ||||||||||| | ||| ||||    
T  14519926 ccaaagtcagatatttttggattcatgttttcatctaacaaaatgttacttggttttagatctcgatgaattattctgagtcttgaatcgcgatgcagat 14520025  T
Q  243 agacaagtcccctagcaatgccgtcaat 270  Q
    | |  ||||| || |||||||| |||||    
T  14520026 aaagtagtcctcttgcaatgccttcaat 14520053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 232
Target Start/End: Complemental strand, 36399842 - 36399735
Alignment:
Q  125 ccaaacattcttgccattccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctctatgaattattcttagtc 224  Q
    ||||| ||||| ||||| || || || || ||||| |||||||||||  |||| |  ||||||||||| |||||||||||||||||||||||| | || |    
T  36399842 ccaaatattctagccataccgaaatctgagattttgggattcatttcagcatcaaggagaacattgctggcttttagatctctatgaattattttcagcc 36399743  T
Q  225 ttgaatct 232  Q
    ||||||||    
T  36399742 ttgaatct 36399735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 75 - 233
Target Start/End: Complemental strand, 36290707 - 36290549
Alignment:
Q  75 cttactatgttccaactacccttttggtcttttcttcagtttgatctccaccaaacattcttgccattccaaagtcagaaatttttggattcatttcgcc 174  Q
    ||||||||||||||||||| || |  || ||  ||||| |||||| ||| ||||| ||  ||||||  |||||||| ||||||||||||||||| |   |    
T  36290707 cttactatgttccaactactctctctgtattcccttcattttgatttcccccaaatatctttgccaagccaaagtctgaaatttttggattcatattttc 36290608  T
Q  175 atctaaaagaacattgcttgcttttagatctctatgaattattcttagtcttgaatctc 233  Q
    ||| || | ||  ||||||||||||||||||| ||| |||||||| || | ||||||||    
T  36290607 atccaacaaaatgttgcttgcttttagatctcgatggattattctaagacgtgaatctc 36290549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 36376409 - 36376291
Alignment:
Q  125 ccaaacattcttgccattccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctctatgaattattcttagtc 224  Q
    ||||| ||||| ||||| ||||| || || ||||| ||||||||| |  |||| |  ||||| ||||| |||||||||||||||||||||||| | || |    
T  36376409 ccaaatattctagccataccaaaatctgagattttgggattcattgcagcatcgaggagaacgttgctggcttttagatctctatgaattattttcagcc 36376310  T
Q  225 ttgaatctctatgaagata 243  Q
    ||||||||  |||||||||    
T  36376309 ttgaatcttgatgaagata 36376291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 77 - 243
Target Start/End: Complemental strand, 36429502 - 36429336
Alignment:
Q  77 tactatgttccaactacccttttggtcttttcttcagtttgatctccaccaaacattcttgccattccaaagtcagaaatttttggattcatttcgccat 176  Q
    ||||||||||| || || ||||| ||  || ||| | ||| |||| | ||||| ||||| ||||| ||||| || || ||||| ||||||||| |  |||    
T  36429502 tactatgttccgaccactctttttgttcttgcttgaatttcatcttctccaaatattctagccataccaaaatctgagattttgggattcattgcagcat 36429403  T
Q  177 ctaaaagaacattgcttgcttttagatctctatgaattattcttagtcttgaatctctatgaagata 243  Q
    | |  ||||| ||||| |||||||||||||||||||||||| | || |||||||||  |||||||||    
T  36429402 cgaggagaacgttgctggcttttagatctctatgaattattttcagccttgaatcttgatgaagata 36429336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 125 - 232
Target Start/End: Complemental strand, 36407299 - 36407192
Alignment:
Q  125 ccaaacattcttgccattccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctctatgaattattcttagtc 224  Q
    ||||| ||||| ||||| ||||| || || ||||| ||||||||| |  | || |  ||||||||||| |||||||||||||||||||||||| | || |    
T  36407299 ccaaatattctagccataccaaaatctgagattttgggattcattgcagcgtcaaggagaacattgctggcttttagatctctatgaattattttcagcc 36407200  T
Q  225 ttgaatct 232  Q
    ||||||||    
T  36407199 ttgaatct 36407192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 125 - 232
Target Start/End: Complemental strand, 36412422 - 36412315
Alignment:
Q  125 ccaaacattcttgccattccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctctatgaattattcttagtc 224  Q
    ||||| ||||| ||||| ||||| || || ||||| ||||||||| |  | || |  ||||||||||| |||||||||||||||||||||||| | || |    
T  36412422 ccaaatattctagccataccaaaatctgagattttgggattcattgcagcgtcaaggagaacattgctggcttttagatctctatgaattattttcagcc 36412323  T
Q  225 ttgaatct 232  Q
    ||||||||    
T  36412322 ttgaatct 36412315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 36419461 - 36419343
Alignment:
Q  125 ccaaacattcttgccattccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctctatgaattattcttagtc 224  Q
    ||||| ||||| ||||| ||||| || || ||||| ||||||||| |  |||| |  ||||| ||||| ||||||||||||||||| |||||| | || |    
T  36419461 ccaaatattctagccataccaaaatccgagattttgggattcattacagcatcaaggagaacgttgctggcttttagatctctatggattattttcagcc 36419362  T
Q  225 ttgaatctctatgaagata 243  Q
    ||||||||  |||||||||    
T  36419361 ttgaatcttgatgaagata 36419343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 78 - 255
Target Start/End: Complemental strand, 31708360 - 31708183
Alignment:
Q  78 actatgttccaactacccttttggtcttttcttcagtttgatctccaccaaacattcttgccattccaaagtcagaaatttttggattcatttcgccatc 177  Q
    |||||||||||||||| || |  || ||| ||||| | || ||||| |||||   ||| ||||||||||| || || |||||||| ||||  | |  |||    
T  31708360 actatgttccaactactctatgtgtatttccttcaatctggtctcctccaaaagatctagccattccaaaatctgatatttttgggttcaacttgtgatc 31708261  T
Q  178 taaaagaacattgcttgcttttagatctctatgaattattcttagtcttgaatctctatgaagatagacaagtcccct 255  Q
     || | |||||| |||||||| |||||||||||||| || |||| ||  ||||||  ||||||||| |||||||||||    
T  31708260 caacaaaacattacttgctttgagatctctatgaataatccttaatcgagaatcttgatgaagatacacaagtcccct 31708183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 243
Target Start/End: Complemental strand, 36389594 - 36389533
Alignment:
Q  182 agaacattgcttgcttttagatctctatgaattattcttagtcttgaatctctatgaagata 243  Q
    ||||||||||| |||||||| ||||||||||| ||| | || |||||||||  |||||||||    
T  36389594 agaacattgctggcttttaggtctctatgaatgattttcagccttgaatcttgatgaagata 36389533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 167
Target Start/End: Original strand, 36437717 - 36437769
Alignment:
Q  115 ttgatctccaccaaacattcttgccattccaaagtcagaaatttttggattca 167  Q
    ||||||||||||||||||||| ||||| ||||| || | ||||||||| ||||    
T  36437717 ttgatctccaccaaacattctagccataccaaaatctgcaatttttgggttca 36437769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 3e-18; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 120 - 243
Target Start/End: Complemental strand, 20264063 - 20263940
Alignment:
Q  120 ctccaccaaacattcttgccattccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctctatgaattattct 219  Q
    |||| ||||| ||||| ||||| |||||||| || |||||||||||||  ||  ||||||| |||||||| ||||| || | |||||||||||| |||||    
T  20264063 ctcctccaaagattctagccataccaaagtctgatatttttggattcaactcctcatctaacagaacattacttgccttcaaatctctatgaataattct 20263964  T
Q  220 tagtcttgaatctctatgaagata 243  Q
    ||| || |||||||| ||||||||    
T  20263963 tagcctagaatctctgtgaagata 20263940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 20279567 - 20279449
Alignment:
Q  125 ccaaacattcttgccattccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctctatgaattattcttagtc 224  Q
    ||||| ||||| ||||| |||||||| || |||||||||||||  ||  ||||||| || ||||| ||||| || | |||||| ||||| ||||||||||    
T  20279567 ccaaagattctagccataccaaagtctgatatttttggattcagctcctcatctaacaggacattacttgccttcaaatctctgtgaataattcttagtc 20279468  T
Q  225 ttgaatctctatgaagata 243  Q
    | |||||||| ||||||||    
T  20279467 tggaatctctgtgaagata 20279449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 20294714 - 20294596
Alignment:
Q  125 ccaaacattcttgccattccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctctatgaattattcttagtc 224  Q
    ||||| ||||| |||||||||||||| || |||||||||||||  ||  ||||||| || ||||| ||||| || | |||||||||||| |||||||| |    
T  20294714 ccaaagattctagccattccaaagtccgatatttttggattcagctcctcatctaacaggacattacttgccttcaaatctctatgaataattcttagcc 20294615  T
Q  225 ttgaatctctatgaagata 243  Q
    | |||||||  ||||||||    
T  20294614 tagaatctcggtgaagata 20294596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 120 - 243
Target Start/End: Complemental strand, 20243669 - 20243546
Alignment:
Q  120 ctccaccaaacattcttgccattccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctctatgaattattct 219  Q
    |||| ||||| ||||| ||||  |||||||| || |||||||||||||  ||  ||||||| || ||||| ||||| || | |||||||||||| |||||    
T  20243669 ctcctccaaatattctagccagaccaaagtctgatatttttggattcaactcctcatctaacaggacattacttgccttcaaatctctatgaataattct 20243570  T
Q  220 tagtcttgaatctctatgaagata 243  Q
    ||| || |||||||| ||||||||    
T  20243569 tagcctagaatctctgtgaagata 20243546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 20284997 - 20284879
Alignment:
Q  125 ccaaacattcttgccattccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctctatgaattattcttagtc 224  Q
    ||||| |||||  |||| |||||||| || |||||||||||||  ||  ||||||| |  ||||| ||||| || | |||||||||||| ||||||||||    
T  20284997 ccaaagattctaaccataccaaagtctgatatttttggattcagctcctcatctaacaagacattacttgccttcaaatctctatgaataattcttagtc 20284898  T
Q  225 ttgaatctctatgaagata 243  Q
    | |||||||| ||||||||    
T  20284897 tagaatctctgtgaagata 20284879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 120 - 243
Target Start/End: Original strand, 20168087 - 20168210
Alignment:
Q  120 ctccaccaaacattcttgccattccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctctatgaattattct 219  Q
    |||| ||||| ||||| ||||| ||||| || || |||||||||||||  ||  ||||||| |  ||||| ||||| || | |||||||||||| |||||    
T  20168087 ctcctccaaagattctagccataccaaattctgatatttttggattcaactcctcatctaacaagacattacttgccttcaaatctctatgaataattct 20168186  T
Q  220 tagtcttgaatctctatgaagata 243  Q
    |||||| |||||||| || |||||    
T  20168187 tagtctggaatctctgtggagata 20168210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 120 - 243
Target Start/End: Complemental strand, 20231604 - 20231481
Alignment:
Q  120 ctccaccaaacattcttgccattccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctctatgaattattct 219  Q
    |||| ||||| ||||| ||||| |||||||| || |||||||||||||  |   ||||||| || ||||| ||||| || | | |||||||||| |||||    
T  20231604 ctcctccaaagattctagccataccaaagtctgatatttttggattcaacttctcatctaacaggacattacttgccttcaaacctctatgaataattct 20231505  T
Q  220 tagtcttgaatctctatgaagata 243  Q
    ||| || |||||||| ||||||||    
T  20231504 tagcctagaatctctgtgaagata 20231481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 20273863 - 20273745
Alignment:
Q  125 ccaaacattcttgccattccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctctatgaattattcttagtc 224  Q
    ||||| ||||| ||||| |||||||| | ||||||||||||||  ||  | ||||| |  ||||| ||||| || | |||||||||||| |||||||| |    
T  20273863 ccaaagattctagccataccaaagtcggcaatttttggattcagctcctcgtctaacaagacattacttgccttcaaatctctatgaataattcttagcc 20273764  T
Q  225 ttgaatctctatgaagata 243  Q
    | |||||||| ||||||||    
T  20273763 tggaatctctgtgaagata 20273745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 121 - 165
Target Start/End: Original strand, 20062569 - 20062613
Alignment:
Q  121 tccaccaaacattcttgccattccaaagtcagaaatttttggatt 165  Q
    ||||||||| ||||| ||||||||||||||||||| ||| |||||    
T  20062569 tccaccaaagattctagccattccaaagtcagaaactttgggatt 20062613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 4e-17; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 134 - 243
Target Start/End: Complemental strand, 3094955 - 3094846
Alignment:
Q  134 cttgccattccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctctatgaattattcttagtcttgaatctc 233  Q
    ||||||| |||||| ||||| |||||||||||||| ||   |||||| |||||||| ||||||||||| |||||||| |||| ||||||||| || |||     
T  3094955 cttgccaatccaaaatcagatatttttggattcatctcttgatctaagagaacattacttgcttttaggtctctatggattactcttagtctagagtctt 3094856  T
Q  234 tatgaagata 243  Q
     |||||||||    
T  3094855 catgaagata 3094846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 134 - 243
Target Start/End: Original strand, 4548013 - 4548122
Alignment:
Q  134 cttgccattccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctctatgaattattcttagtcttgaatctc 233  Q
    ||||||| |||||| ||||| |||||||||||||| ||   ||||||||||||||| ||||||||||| |||||||| |||| ||| ||||| || |||     
T  4548013 cttgccaatccaaaatcagatatttttggattcatctcttgatctaaaagaacattacttgcttttaggtctctatggattactctaagtctagagtctt 4548112  T
Q  234 tatgaagata 243  Q
     |||||||||    
T  4548113 catgaagata 4548122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 134 - 225
Target Start/End: Complemental strand, 3080518 - 3080427
Alignment:
Q  134 cttgccattccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctctatgaattattcttagtct 225  Q
    ||||||| |||||| ||||| |||||||||||||| ||   |||||| |||||||| ||||||||||| |||||||| |||| ||| |||||    
T  3080518 cttgccaatccaaaatcagatatttttggattcatctcttgatctaatagaacattacttgcttttaggtctctatggattactctaagtct 3080427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 3122639 - 3122541
Alignment:
Q  115 ttgatctccaccaaacattcttgccattccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctctatgaat 213  Q
    ||||||||| |||||  ||||||| | ||||||||| ||||||||||||||||||||   |||||| | || |||||| ||||| || ||||| |||||    
T  3122639 ttgatctcctccaaatgttcttgctagtccaaagtctgaaatttttggattcatttcatgatctaacaaaatattgctggctttcaggtctctgtgaat 3122541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 126 - 210
Target Start/End: Original strand, 15712004 - 15712088
Alignment:
Q  126 caaacattcttgccattccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctctatg 210  Q
    ||||| ||||||||| ||||||||| || |||||||||||||||||  | || ||||| |||||||||||||| | |||||||||    
T  15712004 caaaccttcttgccaatccaaagtctgatatttttggattcatttcatcgtccaaaagtacattgcttgctttcatatctctatg 15712088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 134 - 221
Target Start/End: Original strand, 15692668 - 15692755
Alignment:
Q  134 cttgccattccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctctatgaattattctta 221  Q
    ||||||| |||||| || || ||||| |||||||||||   |||||| ||||||||||| ||||| |||||||||||||||| |||||    
T  15692668 cttgccaatccaaaatctgatattttgggattcatttcatgatctaatagaacattgctagctttgagatctctatgaattactctta 15692755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 243
Target Start/End: Original strand, 4142879 - 4142979
Alignment:
Q  143 ccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctctatgaattattcttagtcttgaatctctatgaagat 242  Q
    |||||||| || ||||||||| |||| |||||||| |  |  || ||||| ||||||| ||||||||| || || ||||||||||| |||||||||||||    
T  4142879 ccaaagtctgatatttttggaatcatgtcgccatcaagtaagacgttgctggcttttaaatctctatgtataatccttagtcttgagtctctatgaagat 4142978  T
Q  243 a 243  Q
    |    
T  4142979 a 4142979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 132 - 224
Target Start/End: Original strand, 15799849 - 15799941
Alignment:
Q  132 ttcttgccattccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctctatgaattattcttagtc 224  Q
    ||||||||| |||||| || || |||||||||||||||||  |||| | |||||||||||| ||||| |||||||| || |||| ||| ||||    
T  15799849 ttcttgccaatccaaaatctgatatttttggattcatttcatcatccagaagaacattgctggctttcagatctctgtggattactctaagtc 15799941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 243
Target Start/End: Original strand, 4150936 - 4150991
Alignment:
Q  188 ttgcttgcttttagatctctatgaattattcttagtcttgaatctctatgaagata 243  Q
    ||||||||||||||||||||||| || || |||||||| || ||||||||||||||    
T  4150936 ttgcttgcttttagatctctatgtatgatccttagtctcgagtctctatgaagata 4150991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 224
Target Start/End: Original strand, 15805391 - 15805473
Alignment:
Q  142 tccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctctatgaattattcttagtc 224  Q
    |||||| || || |||||||||||||||||  |||||| |||||||||||| ||||| |||||||| || |||| ||| ||||    
T  15805391 tccaaaatctgatatttttggattcatttcatcatctagaagaacattgctggctttcagatctctgtggattactctaagtc 15805473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 142 - 207
Target Start/End: Original strand, 15813241 - 15813306
Alignment:
Q  142 tccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctct 207  Q
    |||||| ||||| |||||||||||||||||  |||| | |||||||||||| ||||| ||||||||    
T  15813241 tccaaaatcagatatttttggattcatttcatcatccagaagaacattgctcgctttcagatctct 15813306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 243
Target Start/End: Original strand, 4120485 - 4120543
Alignment:
Q  185 acattgcttgcttttagatctctatgaattattcttagtcttgaatctctatgaagata 243  Q
    |||||||||||||||| ||||||||| || ||  | |||||||| ||||||||||||||    
T  4120485 acattgcttgcttttaaatctctatgtataatcttaagtcttgagtctctatgaagata 4120543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 210
Target Start/End: Original strand, 15703721 - 15703799
Alignment:
Q  132 ttcttgccattccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctctatg 210  Q
    ||||||||| |||||| || || |||||||||||||||||  |||||| |||||| ||||  ||||| || ||||||||    
T  15703721 ttcttgccaatccaaaatctgatatttttggattcatttcatcatctagaagaacgttgcaggctttaaggtctctatg 15703799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 168
Target Start/End: Complemental strand, 19379538 - 19379497
Alignment:
Q  127 aaacattcttgccattccaaagtcagaaatttttggattcat 168  Q
    ||||||||||||||| ||||| |||| |||||||||||||||    
T  19379538 aaacattcttgccataccaaaatcagcaatttttggattcat 19379497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 19526541 - 19526582
Alignment:
Q  127 aaacattcttgccattccaaagtcagaaatttttggattcat 168  Q
    ||||||||||||||| ||||| |||||||||||||| |||||    
T  19526541 aaacattcttgccataccaaaatcagaaatttttgggttcat 19526582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 19537435 - 19537476
Alignment:
Q  127 aaacattcttgccattccaaagtcagaaatttttggattcat 168  Q
    ||||||||||||||| ||||| |||||||||||||| |||||    
T  19537435 aaacattcttgccataccaaaatcagaaatttttgggttcat 19537476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 210
Target Start/End: Original strand, 15697352 - 15697420
Alignment:
Q  142 tccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctctatg 210  Q
    |||||| || || ||||| |||||||||||  |||| | |||||||||||| ||||| |||||||||||    
T  15697352 tccaaaatctgatattttcggattcatttcatcatccagaagaacattgctggctttcagatctctatg 15697420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 159
Target Start/End: Complemental strand, 19289734 - 19289702
Alignment:
Q  127 aaacattcttgccattccaaagtcagaaatttt 159  Q
    ||||||||||||||||||||| |||||||||||    
T  19289734 aaacattcttgccattccaaaatcagaaatttt 19289702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 19348471 - 19348431
Alignment:
Q  128 aacattcttgccattccaaagtcagaaatttttggattcat 168  Q
    |||||||||||||| ||||| |||||||||||||| |||||    
T  19348471 aacattcttgccataccaaaatcagaaatttttgggttcat 19348431  T

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Target: chr1 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 228
Target Start/End: Original strand, 36311356 - 36311456
Alignment:
Q  128 aacattcttgccattccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctctatgaattattcttagtcttg 227  Q
    |||||||||||||| ||||| |||||||||||||| ||||| |   |||| ||||| |  ||||||||||| |  ||||||||||| ||| | |||||||    
T  36311356 aacattcttgccataccaaaatcagaaatttttgggttcatattctcatccaaaagtatgttgcttgctttcaagtctctatgaatgattttgagtcttg 36311455  T
Q  228 a 228  Q
    |    
T  36311456 a 36311456  T

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Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 194
Target Start/End: Complemental strand, 47627299 - 47627239
Alignment:
Q  134 cttgccattccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttg 194  Q
    |||||||| ||||| ||||| |||||||||||||| | |  ||||| ||||||||||||||    
T  47627299 cttgccatgccaaaatcagagatttttggattcatattgttatctagaagaacattgcttg 47627239  T

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Target: chr5 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 171
Target Start/End: Complemental strand, 28420067 - 28419969
Alignment:
Q  73 tacttactatgttccaactacccttttggtcttttcttcagtttgatctccaccaaacattcttgccattccaaagtcagaaatttttggattcatttc 171  Q
    |||||||||||| |||||||  ||| | |||||| ||||| |||| || || ||| |||| || ||||| ||||| || ||||||||||||| ||||||    
T  28420067 tacttactatgtgccaactattcttcttgtctttccttcaatttggtcacctccacacatcctagccatgccaaaatctgaaatttttggatccatttc 28419969  T

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