View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7311_low_75 (Length: 216)

Name: NF7311_low_75
Description: NF7311
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7311_low_75
NF7311_low_75
[»] chr2 (47 HSPs)
chr2 (109-170)||(1752593-1752654)
chr2 (16-74)||(24851463-24851522)
chr2 (16-89)||(28702015-28702089)
chr2 (18-74)||(6574957-6575014)
chr2 (16-74)||(22455750-22455809)
chr2 (16-74)||(25188652-25188711)
chr2 (16-74)||(39038431-39038490)
chr2 (16-89)||(45087788-45087862)
chr2 (171-216)||(24690113-24690158)
chr2 (171-216)||(24699464-24699509)
chr2 (16-64)||(6391927-6391975)
chr2 (16-64)||(22188898-22188946)
chr2 (16-64)||(23234214-23234262)
chr2 (20-74)||(13964778-13964833)
chr2 (16-74)||(28712497-28712556)
chr2 (16-74)||(40780559-40780618)
chr2 (13-86)||(24575270-24575344)
chr2 (16-64)||(21537978-21538026)
chr2 (16-74)||(10010541-10010600)
chr2 (16-74)||(1587825-1587883)
chr2 (21-63)||(20152790-20152832)
chr2 (13-74)||(20569537-20569599)
chr2 (171-211)||(17333892-17333932)
chr2 (170-214)||(18973150-18973194)
chr2 (16-64)||(22801735-22801783)
chr2 (16-64)||(24778592-24778640)
chr2 (16-64)||(31801676-31801724)
chr2 (13-86)||(22257427-22257501)
chr2 (16-54)||(23185123-23185161)
chr2 (16-54)||(23596386-23596424)
chr2 (16-74)||(28551712-28551770)
chr2 (16-74)||(34322720-34322778)
chr2 (170-216)||(40387041-40387087)
chr2 (17-86)||(22271333-22271401)
chr2 (20-61)||(22316857-22316898)
chr2 (16-89)||(24724096-24724168)
chr2 (17-85)||(40331028-40331096)
chr2 (18-74)||(41122473-41122528)
chr2 (16-51)||(16494620-16494655)
chr2 (18-53)||(26367200-26367235)
chr2 (16-74)||(38780646-38780705)
chr2 (23-74)||(44839683-44839734)
chr2 (13-74)||(17964091-17964153)
chr2 (16-74)||(31328765-31328823)
chr2 (16-74)||(31335486-31335544)
chr2 (171-216)||(19884424-19884469)
chr2 (17-50)||(40331388-40331421)
[»] scaffold0439 (1 HSPs)
scaffold0439 (16-74)||(7509-7567)
[»] chr7 (70 HSPs)
chr7 (16-86)||(4820724-4820794)
chr7 (16-74)||(4493794-4493853)
chr7 (16-85)||(13034702-13034772)
chr7 (16-64)||(13879404-13879452)
chr7 (16-86)||(2499266-2499337)
chr7 (16-74)||(13473336-13473395)
chr7 (16-74)||(16546186-16546245)
chr7 (16-74)||(16619417-16619476)
chr7 (16-74)||(21691674-21691733)
chr7 (16-74)||(28623202-28623261)
chr7 (16-84)||(9710683-9710753)
chr7 (16-74)||(15705343-15705401)
chr7 (18-74)||(35954762-35954819)
chr7 (171-216)||(44413301-44413346)
chr7 (16-87)||(11792107-11792179)
chr7 (16-64)||(13138774-13138822)
chr7 (16-64)||(14186947-14186995)
chr7 (16-87)||(15467152-15467224)
chr7 (16-64)||(19328859-19328907)
chr7 (16-64)||(21284223-21284271)
chr7 (16-64)||(41843271-41843319)
chr7 (16-59)||(4832173-4832216)
chr7 (16-86)||(13027800-13027871)
chr7 (16-74)||(14424557-14424616)
chr7 (13-74)||(16315383-16315445)
chr7 (23-72)||(16557466-16557516)
chr7 (23-72)||(16608146-16608196)
chr7 (170-216)||(18157316-18157362)
chr7 (170-216)||(43005657-43005703)
chr7 (16-64)||(15087813-15087862)
chr7 (19-64)||(48237687-48237732)
chr7 (16-87)||(12367606-12367678)
chr7 (13-74)||(2914502-2914564)
chr7 (16-74)||(8182207-8182265)
chr7 (16-89)||(13261524-13261598)
chr7 (13-74)||(13731522-13731584)
chr7 (16-74)||(15574457-15574515)
chr7 (18-74)||(10884021-10884078)
chr7 (18-74)||(13302111-13302168)
chr7 (18-63)||(16155591-16155636)
chr7 (171-216)||(23443600-23443645)
chr7 (171-216)||(46462084-46462129)
chr7 (16-64)||(16317445-16317493)
chr7 (16-64)||(22580103-22580151)
chr7 (16-74)||(5001711-5001770)
chr7 (12-74)||(9069010-9069073)
chr7 (16-63)||(12175183-12175230)
chr7 (171-210)||(15820471-15820510)
chr7 (16-63)||(29936194-29936241)
chr7 (16-74)||(30025184-30025243)
chr7 (16-63)||(30946255-30946302)
chr7 (23-74)||(33421005-33421056)
chr7 (16-74)||(33604154-33604213)
chr7 (171-209)||(8913485-8913523)
chr7 (13-74)||(13645701-13645763)
chr7 (13-74)||(13681545-13681607)
chr7 (16-61)||(23280824-23280869)
chr7 (16-61)||(33692571-33692616)
chr7 (22-74)||(2266418-2266470)
chr7 (22-74)||(48063666-48063718)
chr7 (13-64)||(11318656-11318707)
chr7 (23-74)||(14424765-14424816)
chr7 (16-51)||(32265559-32265594)
chr7 (16-89)||(13259292-13259366)
chr7 (168-197)||(12583625-12583654)
chr7 (16-57)||(13424766-13424807)
chr7 (12-84)||(24787600-24787672)
chr7 (26-74)||(1292303-1292351)
chr7 (16-64)||(16310804-16310852)
chr7 (23-51)||(48806736-48806764)
[»] chr3 (57 HSPs)
chr3 (16-86)||(52283035-52283106)
chr3 (16-89)||(40799127-40799201)
chr3 (16-74)||(6089980-6090039)
chr3 (16-74)||(14968621-14968680)
chr3 (16-74)||(29952283-29952342)
chr3 (16-74)||(30001437-30001496)
chr3 (16-74)||(47206915-47206974)
chr3 (22-74)||(5212818-5212870)
chr3 (16-74)||(1241921-1241980)
chr3 (16-74)||(12727082-12727141)
chr3 (16-74)||(14954662-14954721)
chr3 (16-74)||(20628308-20628367)
chr3 (16-63)||(24776358-24776405)
chr3 (16-74)||(49554356-49554415)
chr3 (16-73)||(11222049-11222107)
chr3 (16-73)||(11222801-11222859)
chr3 (16-74)||(21639128-21639186)
chr3 (170-216)||(35491055-35491101)
chr3 (16-64)||(18122494-18122542)
chr3 (16-87)||(19885924-19885996)
chr3 (16-63)||(22804867-22804914)
chr3 (16-74)||(25399101-25399160)
chr3 (109-168)||(27444804-27444863)
chr3 (16-74)||(38178491-38178550)
chr3 (13-74)||(19889782-19889844)
chr3 (16-74)||(46797241-46797299)
chr3 (19-64)||(31302612-31302657)
chr3 (16-64)||(2782749-2782797)
chr3 (16-64)||(2783139-2783187)
chr3 (16-63)||(11189257-11189304)
chr3 (16-63)||(14393841-14393888)
chr3 (16-74)||(29854663-29854721)
chr3 (16-74)||(47406263-47406322)
chr3 (16-63)||(50299502-50299549)
chr3 (16-74)||(52919676-52919735)
chr3 (16-62)||(2560450-2560496)
chr3 (17-74)||(41494254-41494312)
chr3 (18-74)||(13823322-13823379)
chr3 (21-85)||(17667611-17667676)
chr3 (22-74)||(2025345-2025397)
chr3 (22-74)||(49669338-49669390)
chr3 (16-64)||(53057571-53057619)
chr3 (16-90)||(16031739-16031814)
chr3 (13-74)||(15902447-15902509)
chr3 (13-74)||(49643607-49643669)
chr3 (16-64)||(8874971-8875019)
chr3 (18-74)||(14310932-14310987)
chr3 (171-211)||(17218119-17218159)
chr3 (16-74)||(17239775-17239834)
chr3 (16-51)||(30055022-30055057)
chr3 (16-63)||(33582483-33582530)
chr3 (16-63)||(46350687-46350734)
chr3 (169-211)||(16017486-16017528)
chr3 (16-74)||(19250236-19250293)
chr3 (18-86)||(12963934-12964003)
chr3 (16-57)||(20724307-20724348)
chr3 (171-211)||(44363482-44363522)
[»] chr8 (41 HSPs)
chr8 (16-89)||(45539331-45539405)
chr8 (13-86)||(36104578-36104651)
chr8 (16-74)||(16206476-16206535)
chr8 (16-85)||(9319806-9319876)
chr8 (16-64)||(31445358-31445406)
chr8 (16-74)||(17796662-17796721)
chr8 (16-74)||(30422277-30422336)
chr8 (16-74)||(15336934-15336992)
chr8 (16-74)||(15425999-15426057)
chr8 (16-74)||(15517303-15517361)
chr8 (16-74)||(22673022-22673080)
chr8 (16-64)||(17442694-17442742)
chr8 (16-64)||(23185593-23185641)
chr8 (17-64)||(18121980-18122027)
chr8 (16-74)||(23264474-23264533)
chr8 (13-85)||(17541333-17541406)
chr8 (26-74)||(6407006-6407054)
chr8 (12-64)||(29692568-29692620)
chr8 (16-74)||(19942481-19942539)
chr8 (16-74)||(25163316-25163375)
chr8 (16-74)||(14990935-14990993)
chr8 (13-74)||(17007555-17007617)
chr8 (16-74)||(18152550-18152608)
chr8 (13-74)||(19153269-19153331)
chr8 (13-63)||(20256356-20256406)
chr8 (13-63)||(20256441-20256491)
chr8 (16-57)||(19706774-19706815)
chr8 (16-64)||(35028324-35028372)
chr8 (13-74)||(12758586-12758648)
chr8 (16-74)||(22662317-22662375)
chr8 (28-74)||(40846262-40846308)
chr8 (16-86)||(43644116-43644185)
chr8 (16-61)||(21932135-21932180)
chr8 (171-211)||(27808608-27808648)
chr8 (22-74)||(43639000-43639052)
chr8 (16-63)||(15934505-15934552)
chr8 (13-74)||(16682097-16682159)
chr8 (171-209)||(24655368-24655406)
chr8 (16-53)||(1744462-1744499)
chr8 (16-49)||(13431465-13431498)
chr8 (23-51)||(33561068-33561096)
[»] chr1 (37 HSPs)
chr1 (16-74)||(25449357-25449415)
chr1 (16-64)||(1577110-1577158)
chr1 (16-64)||(23037293-23037341)
chr1 (16-74)||(1899597-1899656)
chr1 (16-74)||(2266336-2266395)
chr1 (16-74)||(2833906-2833965)
chr1 (16-74)||(22428108-22428167)
chr1 (109-168)||(12795087-12795146)
chr1 (16-86)||(14294052-14294123)
chr1 (16-74)||(22600956-22601015)
chr1 (16-86)||(30892303-30892374)
chr1 (16-74)||(38281613-38281672)
chr1 (16-74)||(7309041-7309099)
chr1 (18-64)||(29215061-29215107)
chr1 (16-74)||(30571453-30571511)
chr1 (16-74)||(44824523-44824581)
chr1 (171-216)||(51967950-51967995)
chr1 (16-64)||(22153087-22153135)
chr1 (16-61)||(14264198-14264243)
chr1 (171-216)||(15473867-15473912)
chr1 (16-60)||(32786708-32786752)
chr1 (13-87)||(22202526-22202601)
chr1 (13-87)||(22202648-22202723)
chr1 (16-86)||(22465582-22465653)
chr1 (16-74)||(10250244-10250302)
chr1 (16-74)||(48571022-48571080)
chr1 (16-57)||(12625318-12625359)
chr1 (35-74)||(20959819-20959859)
chr1 (16-51)||(21983873-21983908)
chr1 (23-74)||(46088243-46088294)
chr1 (20-62)||(2267933-2267975)
chr1 (16-57)||(17025772-17025813)
chr1 (22-74)||(19214860-19214913)
chr1 (18-63)||(28493092-28493137)
chr1 (173-209)||(20521388-20521424)
chr1 (16-64)||(36133472-36133520)
chr1 (170-214)||(44910963-44911007)
[»] scaffold0471 (1 HSPs)
scaffold0471 (13-86)||(2694-2767)
[»] chr6 (46 HSPs)
chr6 (16-74)||(10631387-10631446)
chr6 (16-74)||(13435135-13435194)
chr6 (16-86)||(20731546-20731617)
chr6 (18-89)||(24717659-24717733)
chr6 (16-74)||(16332980-16333038)
chr6 (16-74)||(21617504-21617562)
chr6 (16-74)||(17380813-17380872)
chr6 (16-74)||(21234406-21234465)
chr6 (16-74)||(21624342-21624401)
chr6 (16-74)||(32543513-32543572)
chr6 (16-74)||(19833829-19833887)
chr6 (16-74)||(22077211-22077269)
chr6 (171-216)||(18909125-18909170)
chr6 (16-74)||(20113473-20113533)
chr6 (16-74)||(14101284-14101343)
chr6 (16-74)||(15532470-15532529)
chr6 (16-86)||(18434748-18434819)
chr6 (16-63)||(19687995-19688042)
chr6 (16-59)||(22801409-22801452)
chr6 (13-74)||(13601417-13601479)
chr6 (16-74)||(16876159-16876217)
chr6 (170-216)||(22232596-22232642)
chr6 (171-216)||(3917587-3917632)
chr6 (16-63)||(9717088-9717135)
chr6 (12-74)||(15301468-15301531)
chr6 (16-63)||(16528577-16528624)
chr6 (16-74)||(7762890-7762947)
chr6 (16-74)||(12422492-12422550)
chr6 (171-216)||(14779974-14780019)
chr6 (16-61)||(15986626-15986671)
chr6 (16-64)||(18377688-18377736)
chr6 (17-64)||(19085393-19085440)
chr6 (16-74)||(19623237-19623296)
chr6 (16-74)||(17304106-17304163)
chr6 (16-74)||(19469881-19469938)
chr6 (13-74)||(25593321-25593383)
chr6 (16-65)||(3680362-3680411)
chr6 (16-61)||(12041125-12041170)
chr6 (24-72)||(19952434-19952483)
chr6 (16-51)||(19066854-19066889)
chr6 (171-210)||(21750681-21750720)
chr6 (22-89)||(33353093-33353160)
chr6 (16-74)||(12348792-12348850)
chr6 (13-74)||(14732952-14733014)
chr6 (23-51)||(26588875-26588903)
chr6 (16-56)||(29917307-29917347)
[»] chr5 (39 HSPs)
chr5 (16-74)||(7746524-7746583)
chr5 (16-64)||(23880273-23880321)
chr5 (16-74)||(6498564-6498623)
chr5 (16-74)||(33021909-33021968)
chr5 (16-74)||(11993139-11993197)
chr5 (16-85)||(21100578-21100648)
chr5 (16-74)||(26764721-26764779)
chr5 (16-64)||(13546355-13546403)
chr5 (16-64)||(30742200-30742248)
chr5 (15-85)||(9399440-9399511)
chr5 (16-86)||(12353691-12353762)
chr5 (16-74)||(13736934-13736993)
chr5 (16-74)||(21076011-21076070)
chr5 (16-74)||(31117125-31117184)
chr5 (16-74)||(28138849-28138907)
chr5 (16-74)||(30116702-30116760)
chr5 (16-89)||(3246291-3246363)
chr5 (22-74)||(9088221-9088273)
chr5 (22-74)||(15516218-15516270)
chr5 (16-74)||(31487458-31487517)
chr5 (16-74)||(42242857-42242916)
chr5 (16-73)||(37395418-37395476)
chr5 (16-64)||(33932528-33932576)
chr5 (13-64)||(6513255-6513306)
chr5 (23-74)||(10848022-10848073)
chr5 (173-216)||(13358439-13358482)
chr5 (16-74)||(22000855-22000914)
chr5 (176-214)||(30249351-30249389)
chr5 (16-61)||(90261-90306)
chr5 (21-74)||(21199846-21199898)
chr5 (171-211)||(22704486-22704526)
chr5 (16-74)||(23413804-23413863)
chr5 (16-51)||(35932834-35932869)
chr5 (16-74)||(25097871-25097928)
chr5 (16-74)||(25156963-25157020)
chr5 (168-197)||(15394824-15394853)
chr5 (16-64)||(19546358-19546406)
chr5 (18-74)||(28465177-28465233)
chr5 (23-51)||(35987059-35987087)
[»] chr4 (39 HSPs)
chr4 (16-74)||(17246858-17246917)
chr4 (16-74)||(24628699-24628758)
chr4 (16-74)||(29120616-29120675)
chr4 (16-86)||(6516721-6516791)
chr4 (16-89)||(54679094-54679168)
chr4 (16-79)||(55379555-55379619)
chr4 (16-74)||(14905127-14905186)
chr4 (16-74)||(22676362-22676421)
chr4 (16-74)||(23749774-23749833)
chr4 (16-74)||(56033776-56033835)
chr4 (170-216)||(8657547-8657593)
chr4 (16-84)||(13576950-13577020)
chr4 (16-64)||(44397468-44397516)
chr4 (16-74)||(3792581-3792640)
chr4 (16-63)||(37436332-37436379)
chr4 (18-74)||(12600003-12600060)
chr4 (16-86)||(14605707-14605779)
chr4 (16-74)||(3106218-3106276)
chr4 (16-74)||(16852721-16852779)
chr4 (16-74)||(16939227-16939285)
chr4 (16-64)||(10071763-10071811)
chr4 (16-63)||(15134979-15135026)
chr4 (12-74)||(29681315-29681378)
chr4 (16-74)||(17399482-17399540)
chr4 (13-74)||(19611171-19611233)
chr4 (13-74)||(19665615-19665676)
chr4 (16-57)||(22089548-22089589)
chr4 (16-63)||(10072150-10072197)
chr4 (16-74)||(19883941-19884000)
chr4 (13-86)||(23120773-23120848)
chr4 (16-54)||(6640959-6640997)
chr4 (21-74)||(37986420-37986474)
chr4 (16-57)||(8686244-8686285)
chr4 (16-65)||(11900364-11900413)
chr4 (18-55)||(41115618-41115655)
chr4 (23-51)||(9752351-9752379)
chr4 (110-162)||(20055880-20055932)
chr4 (23-51)||(38513187-38513215)
chr4 (16-64)||(55731089-55731137)
[»] scaffold0859 (1 HSPs)
scaffold0859 (16-89)||(2206-2280)
[»] scaffold0028 (1 HSPs)
scaffold0028 (16-74)||(24576-24634)
[»] scaffold0280 (1 HSPs)
scaffold0280 (16-89)||(3483-3556)
[»] scaffold0043 (2 HSPs)
scaffold0043 (16-72)||(79159-79215)
scaffold0043 (173-216)||(33230-33273)
[»] scaffold0479 (1 HSPs)
scaffold0479 (16-74)||(9218-9277)
[»] scaffold0210 (1 HSPs)
scaffold0210 (16-74)||(873-932)
[»] scaffold0205 (1 HSPs)
scaffold0205 (16-86)||(752-823)
[»] scaffold0163 (1 HSPs)
scaffold0163 (16-74)||(25680-25739)
[»] scaffold0023 (1 HSPs)
scaffold0023 (16-74)||(102807-102866)
[»] scaffold0035 (2 HSPs)
scaffold0035 (16-74)||(110392-110450)
scaffold0035 (18-74)||(20267-20324)
[»] scaffold0004 (3 HSPs)
scaffold0004 (16-74)||(210657-210715)
scaffold0004 (13-74)||(378348-378410)
scaffold0004 (18-74)||(219491-219547)
[»] scaffold0036 (1 HSPs)
scaffold0036 (16-64)||(111400-111448)
[»] scaffold1359 (1 HSPs)
scaffold1359 (16-74)||(6-65)
[»] scaffold0315 (1 HSPs)
scaffold0315 (20-74)||(7921-7976)
[»] scaffold0115 (1 HSPs)
scaffold0115 (16-74)||(17583-17642)
[»] scaffold0007 (3 HSPs)
scaffold0007 (16-63)||(59902-59949)
scaffold0007 (20-74)||(45921-45975)
scaffold0007 (20-74)||(63592-63646)
[»] scaffold0359 (1 HSPs)
scaffold0359 (16-89)||(6524-6598)
[»] scaffold0275 (1 HSPs)
scaffold0275 (16-74)||(23879-23937)
[»] scaffold0217 (2 HSPs)
scaffold0217 (16-74)||(22956-23014)
scaffold0217 (16-89)||(729-804)
[»] scaffold1699 (1 HSPs)
scaffold1699 (171-216)||(1385-1430)
[»] scaffold0119 (1 HSPs)
scaffold0119 (171-216)||(40191-40236)
[»] scaffold0290 (2 HSPs)
scaffold0290 (16-64)||(19454-19502)
scaffold0290 (171-211)||(7548-7588)
[»] scaffold0161 (2 HSPs)
scaffold0161 (16-74)||(10907-10967)
scaffold0161 (16-74)||(15571-15631)
[»] scaffold0005 (1 HSPs)
scaffold0005 (16-86)||(211599-211671)
[»] scaffold0251 (1 HSPs)
scaffold0251 (15-61)||(7096-7142)
[»] scaffold0081 (1 HSPs)
scaffold0081 (16-74)||(13246-13303)
[»] scaffold1294 (1 HSPs)
scaffold1294 (16-57)||(2039-2080)
[»] scaffold0530 (1 HSPs)
scaffold0530 (18-74)||(2816-2873)
[»] scaffold0011 (2 HSPs)
scaffold0011 (17-74)||(66206-66263)
scaffold0011 (17-74)||(145249-145306)
[»] scaffold0009 (1 HSPs)
scaffold0009 (16-61)||(83627-83672)
[»] scaffold0567 (1 HSPs)
scaffold0567 (16-74)||(9150-9209)
[»] scaffold0607 (1 HSPs)
scaffold0607 (16-70)||(5389-5443)
[»] scaffold0249 (1 HSPs)
scaffold0249 (16-74)||(18559-18617)
[»] scaffold0247 (1 HSPs)
scaffold0247 (16-74)||(16514-16571)
[»] scaffold0026 (1 HSPs)
scaffold0026 (13-74)||(7131-7193)
[»] scaffold0301 (1 HSPs)
scaffold0301 (171-216)||(8949-8994)
[»] scaffold0025 (1 HSPs)
scaffold0025 (21-74)||(73783-73835)
[»] scaffold0420 (1 HSPs)
scaffold0420 (171-211)||(10899-10939)
[»] scaffold0343 (2 HSPs)
scaffold0343 (171-211)||(4667-4707)
scaffold0343 (171-211)||(4875-4915)
[»] scaffold0031 (1 HSPs)
scaffold0031 (171-211)||(33731-33771)
[»] scaffold0022 (1 HSPs)
scaffold0022 (16-64)||(158409-158457)
[»] scaffold0352 (1 HSPs)
scaffold0352 (16-51)||(1617-1652)
[»] scaffold0334 (1 HSPs)
scaffold0334 (16-59)||(7163-7206)
[»] scaffold0330 (1 HSPs)
scaffold0330 (36-74)||(491-530)
[»] scaffold0146 (1 HSPs)
scaffold0146 (16-74)||(14366-14425)
[»] scaffold0056 (1 HSPs)
scaffold0056 (16-51)||(35543-35578)
[»] scaffold0045 (1 HSPs)
scaffold0045 (16-51)||(88398-88433)
[»] scaffold0598 (1 HSPs)
scaffold0598 (16-74)||(2586-2643)
[»] scaffold0138 (1 HSPs)
scaffold0138 (21-74)||(16238-16292)
[»] scaffold0084 (1 HSPs)
scaffold0084 (13-86)||(48556-48630)
[»] scaffold0064 (1 HSPs)
scaffold0064 (16-74)||(44665-44722)
[»] scaffold0002 (1 HSPs)
scaffold0002 (171-209)||(362882-362920)
[»] scaffold0337 (1 HSPs)
scaffold0337 (13-85)||(14208-14281)
[»] scaffold0065 (1 HSPs)
scaffold0065 (13-85)||(1250-1323)
[»] scaffold0323 (1 HSPs)
scaffold0323 (171-211)||(17744-17784)
[»] scaffold0132 (1 HSPs)
scaffold0132 (169-197)||(24299-24327)


Alignment Details
Target: chr2 (Bit Score: 62; Significance: 6e-27; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 109 - 170
Target Start/End: Original strand, 1752593 - 1752654
Alignment:
109 ccttccttggtgaaataagcttcgatgcggctgtaccatgctcgtggtgcttgtttaaggcc 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
1752593 ccttccttggtgaaataagcttcgatgcggctgtaccatgctcgtggtgcttgtttaaggcc 1752654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 24851463 - 24851522
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
24851463 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 24851522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 28702015 - 28702089
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaagaaa 89  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||  ||| |||||||||    
28702015 acatcacttcagaagtagaactctatttgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagaaa 28702089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 6574957 - 6575014
Alignment:
18 atcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
6574957 atcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 6575014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 22455750 - 22455809
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
22455750 acatcacttcagaagtagaactctatctgcttctgatcagtgttttgagcttaggagaaa 22455809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 25188711 - 25188652
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
25188711 acatcacttcagaagtggaactctatctgcttctgatcagtgttttcagcttaggagaaa 25188652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 39038431 - 39038490
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
39038431 acatcacttcagaagtataactctatctgcttctgatcagtgttttcagcttaggagaaa 39038490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 45087788 - 45087862
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaagaaa 89  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||  ||| |||||||||    
45087788 acatcacttcagaagtataaatctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagaaa 45087862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 24690113 - 24690158
Alignment:
171 tgtcataccccaatttttgacctaagaacctacattcatacaccct 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
24690113 tgtcataccccaatttttgacctaagaacctacattcatacaccct 24690158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 24699464 - 24699509
Alignment:
171 tgtcataccccaatttttgacctaagaacctacattcatacaccct 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
24699464 tgtcataccccaatttttgacctaagaacctacattcatacaccct 24699509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 6391975 - 6391927
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
6391975 acatcacttcagaagtagaactctatatgcttctgatcagtgttttcag 6391927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 22188898 - 22188946
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||    
22188898 acatcacttcagaagtagaactatatctgcttctgatcagtgttttcag 22188946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 23234262 - 23234214
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
23234262 acatcacttcagaagtaaaactctatctgcttctgatcagtgttttcag 23234214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 13964778 - 13964833
Alignment:
20 cacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
13964778 cacttcagaagtagaactttatctgcttctgatcagtgttttcagcttaggagaaa 13964833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 28712497 - 28712556
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||    
28712497 acatcacttcagaagtataactctatctgcttctgatcaatgttttcagcttaggagaaa 28712556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 40780618 - 40780559
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
40780618 acatcacttcagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaa 40780559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 24575344 - 24575270
Alignment:
13 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaag 86  Q
    |||| ||||||||||||| | |||||||| |||||||||||||||||||||| |||||||||| |||| ||||||    
24575344 tggaaatcacttcagaagcaaaactctatttgcttctgatcagtgttttcagcttaggagaaaatgaagaaaaag 24575270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 21537978 - 21538026
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||    
21537978 acatcacttcagaagtagaactctatctgcttctaatcaatgttttcag 21538026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 10010541 - 10010600
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||| ||||| |||||||||| |||||||||||||||||||||| ||||||||||    
10010541 acatcactttagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaa 10010600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 1587825 - 1587883
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||| ||||||||||||||||||||||||||||||   || |||||||||||||||||    
1587825 acatctcttcagaagtagaactctatctgcttctgacttgtattttcagttaggagaaa 1587883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 20152790 - 20152832
Alignment:
21 acttcagaagtagaactctatctgcttctgatcagtgttttca 63  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
20152790 acttcagaagtagaactctatctgcttctgattagtgttttca 20152832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 20569537 - 20569599
Alignment:
13 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||| ||||||||||||| | |||||||| |||||||||||||||||||||| ||||||||||    
20569537 tggaaatcacttcagaagcataactctatttgcttctgatcagtgttttcagcttaggagaaa 20569599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 17333932 - 17333892
Alignment:
171 tgtcataccccaatttttgacctaagaacctacattcatac 211  Q
    ||||||||||||||||||||||||||| |||||||||||||    
17333932 tgtcataccccaatttttgacctaagaccctacattcatac 17333892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 18973194 - 18973150
Alignment:
170 ctgtcataccccaatttttgacctaagaacctacattcatacacc 214  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||    
18973194 ctgtcataccccaatttttgaccaaagaatctacattcatacacc 18973150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 22801783 - 22801735
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    ||||||||| |||||||||||||||||||||| | ||||||||||||||    
22801783 acatcactttagaagtagaactctatctgcttataatcagtgttttcag 22801735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 24778640 - 24778592
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    ||||||||||||||| | |||||||| ||||||||||||||||||||||    
24778640 acatcacttcagaagcataactctatttgcttctgatcagtgttttcag 24778592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 31801676 - 31801724
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    ||||||||| | ||| |||||||||||||||||||||||||||||||||    
31801676 acatcactttaaaagcagaactctatctgcttctgatcagtgttttcag 31801724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 22257501 - 22257427
Alignment:
13 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaag 86  Q
    |||| ||||||||||||| | |||||||| |||||||||| ||||||||||| || ||||||| |||| ||||||    
22257501 tggaaatcacttcagaagcataactctatttgcttctgataagtgttttcagctttggagaaaatgaagaaaaag 22257427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 23185123 - 23185161
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatca 54  Q
    |||||||||||||||| ||||||||||||||||||||||    
23185123 acatcacttcagaagttgaactctatctgcttctgatca 23185161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 23596386 - 23596424
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatca 54  Q
    |||||||||||||||| ||||||||||||||||||||||    
23596386 acatcacttcagaagttgaactctatctgcttctgatca 23596424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 28551712 - 28551770
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||| |||||||||||||||||||||||||||||| | |  |||||||||| ||||||    
28551712 acatctcttcagaagtagaactctatctgcttctgaactgcattttcagttatgagaaa 28551770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 34322720 - 34322778
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||| ||||||||||||||||  ||||| || ||||| ||||||||||||||||||||    
34322720 acatctcttcagaagtagaactacatctgtttttgatctgtgttttcagttaggagaaa 34322778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 40387087 - 40387041
Alignment:
170 ctgtcataccccaatttttgacctaagaacctacattcatacaccct 216  Q
    ||||||||||||||||||| |||||||| |||||||| |||||||||    
40387087 ctgtcataccccaattttttacctaagaccctacatttatacaccct 40387041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 22271401 - 22271333
Alignment:
17 catcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaattgaataaaaag 86  Q
    ||||||||||||||  ||||||||||||||| |||||||||  ||||| |||||||||| ||| ||||||    
22271401 catcacttcagaagctgaactctatctgcttatgatcagtgacttcag-taggagaaatcgaagaaaaag 22271333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 22316898 - 22316857
Alignment:
20 cacttcagaagtagaactctatctgcttctgatcagtgtttt 61  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
22316898 cacttcagaagtggaactatatctgcttctgatcagtgtttt 22316857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 24724168 - 24724096
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaattgaataaaaagaaa 89  Q
    |||||||||||||||  ||||||||||||||||||| || || |||||| |||||||||  ||| |||||||||    
24724168 acatcacttcagaagctgaactctatctgcttctgaccaatgatttcag-taggagaaaacgaagaaaaagaaa 24724096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 40331096 - 40331028
Alignment:
17 catcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaattgaataaaaa 85  Q
    |||| |||||||||||||||||||||||||| ||| | |  |||| ||||||||||||| ||| |||||    
40331096 catctcttcagaagtagaactctatctgcttatgaactgcatttttagttaggagaaatagaagaaaaa 40331028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 41122473 - 41122528
Alignment:
18 atcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    |||||||||||||  |||||||||||||||||||||||||  ||||| |||||||||    
41122473 atcacttcagaagctgaactctatctgcttctgatcagtgacttcag-taggagaaa 41122528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 16494655 - 16494620
Alignment:
16 acatcacttcagaagtagaactctatctgcttctga 51  Q
    ||||| ||||||||||||||||||||||||||||||    
16494655 acatctcttcagaagtagaactctatctgcttctga 16494620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 26367200 - 26367235
Alignment:
18 atcacttcagaagtagaactctatctgcttctgatc 53  Q
    ||||||||||||||| ||||||||||||||||||||    
26367200 atcacttcagaagtaaaactctatctgcttctgatc 26367235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 38780705 - 38780646
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||| |||||| ||||||||||| |||| ||||||||| | ||||||||||    
38780705 acatcacttcagatgtagaattctatctgcttatgattagtgttttcggcttaggagaaa 38780646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 44839734 - 44839683
Alignment:
23 ttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||||||||||||||||||||||||| | | |  |||||||||||||||||    
44839734 ttcagaagtagaactctatctgcttctaaactgcattttcagttaggagaaa 44839683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 17964091 - 17964153
Alignment:
13 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||| ||||| ||||||| |||||||||| || || |||||||||||||||| ||||||||||    
17964091 tggaaatcacctcagaagcagaactctatttgtttatgatcagtgttttcagcttaggagaaa 17964153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 31328765 - 31328823
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    |||||||||  |||||| |||| ||||||||||| | |||||||||||| |||||||||    
31328765 acatcacttatgaagtaaaactttatctgcttctaaacagtgttttcagataggagaaa 31328823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 31335486 - 31335544
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    |||||||||  |||||| |||| ||||||||||| | |||||||||||| |||||||||    
31335486 acatcacttatgaagtaaaactttatctgcttctaaacagtgttttcagataggagaaa 31335544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 19884469 - 19884424
Alignment:
171 tgtcataccccaatttttgacctaagaacctacattcatacaccct 216  Q
    ||||| ||| ||||||||||||||| ||| ||||||||||||||||    
19884469 tgtcaaacctcaatttttgacctaaaaacttacattcatacaccct 19884424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 50
Target Start/End: Complemental strand, 40331421 - 40331388
Alignment:
17 catcacttcagaagtagaactctatctgcttctg 50  Q
    |||| |||||||||||||||||||||||||||||    
40331421 catctcttcagaagtagaactctatctgcttctg 40331388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 7509 - 7567
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
7509 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 7567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 4e-25; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 4820794 - 4820724
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaattgaataaaaag 86  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
4820794 acatcacttcaaaagtagaactctatctgcttctgattagtgttttcagttatgagaaattgaataaaaag 4820724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 4493853 - 4493794
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
4493853 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 4493794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 13034702 - 13034772
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaa 85  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||| |||||    
13034702 acatcacttcagaagtagaactgtatctgcttctgatcagtgttttcagcttaggagaaaatgaagaaaaa 13034772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 13879452 - 13879404
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
13879452 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 13879404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 2499337 - 2499266
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaag 86  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||| ||||||    
2499337 acatcatttcagaagtagaactctatctgcttctgattagtgttttcagcttaggagaaaatgaagaaaaag 2499266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 13473336 - 13473395
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
13473336 acatcacttcagaagtagaactatatctgcttctgatcagtgttttcagcttaggagaaa 13473395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 16546186 - 16546245
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
16546186 acatcacttcagaagtagaactttatctgcttctgatcagtgttttcagcttaggagaaa 16546245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 16619476 - 16619417
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
16619476 acatcacttcagaagtagaactttatctgcttctgatcagtgttttcagcttaggagaaa 16619417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 21691733 - 21691674
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
21691733 acatcacttcagaagtagaactttatctgcttctgatcagtgttttcagcttaggagaaa 21691674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 28623202 - 28623261
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
28623202 acatcacttcagaagtagaactctatctgcttctgatcagtgtgttcagcttaggagaaa 28623261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 9710683 - 9710753
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtg-ttttcag-ttaggagaaattgaataaaa 84  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||  ||||||||    
9710683 acatcacttcagaagtagaactctatctgcttctgatcagtgtttttcagcttaggagaaaaagaataaaa 9710753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 15705343 - 15705401
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
15705343 acatctcttcagaagtagaactctatttgcttctgatctgtgttttcagttaggagaaa 15705401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 35954762 - 35954819
Alignment:
18 atcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
35954762 atcacttcagaagtaaaactctatctgcttctgatcagtgttttcagcttaggagaaa 35954819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 44413346 - 44413301
Alignment:
171 tgtcataccccaatttttgacctaagaacctacattcatacaccct 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
44413346 tgtcataccccaatttttgacctaagaacctacattcatacaccct 44413301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 11792179 - 11792107
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttc-agttaggagaaattgaataaaaaga 87  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||  ||| |||||||    
11792179 acatcacttcagaagtagaacactatctgcttctgatcagtgttttcaacttaggagaaaacgaagaaaaaga 11792107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 13138774 - 13138822
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
13138774 acatcacttcagaagtagaactctatctgcttctgatcaatgttttcag 13138822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 14186995 - 14186947
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||    
14186995 acatcacttcagaagtagaattctatctgcttctgatcagtgttttcag 14186947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 15467224 - 15467152
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaaga 87  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||  ||| |||||||    
15467224 acatcacttaagaagtggaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaaga 15467152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 19328859 - 19328907
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||    
19328859 acatcacttcagaagtagaactctatctgcttgtgatcagtgttttcag 19328907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 21284223 - 21284271
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||    
21284223 acatcacttcagaaatagaactctatctgcttctgatcagtgttttcag 21284271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 41843271 - 41843319
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
41843271 acatcacttcagaagtagaactctttctgcttctgatcagtgttttcag 41843319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 4832173 - 4832216
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgtt 59  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
4832173 acatcacttcagaagtagaactctatctgcttctgatcagtgtt 4832216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 13027800 - 13027871
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaag 86  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||| | |||||||||| |||| ||||||    
13027800 acatcactttagaagtagaactctatctgcttctgatcaatgttttcggcttaggagaaaatgaagaaaaag 13027871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 14424616 - 14424557
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||    
14424616 acatcacttcagaagtagaactcgatctgcttctgatcagtgtttttagattaggagaaa 14424557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 16315383 - 16315445
Alignment:
13 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||| ||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
16315383 tggaaatcacttcagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaa 16315445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 72
Target Start/End: Original strand, 16557466 - 16557516
Alignment:
23 ttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggaga 72  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||    
16557466 ttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggaga 16557516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 16608196 - 16608146
Alignment:
23 ttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggaga 72  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||    
16608196 ttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggaga 16608146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 18157362 - 18157316
Alignment:
170 ctgtcataccccaatttttgacctaagaacctacattcatacaccct 216  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||    
18157362 ctgtcataccccagtttttgacctaagaacctacattcatacaccct 18157316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 43005703 - 43005657
Alignment:
170 ctgtcataccccaatttttgacctaagaacctacattcatacaccct 216  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
43005703 ctgtcataccccaattttttacctaagaacctacattcatacaccct 43005657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 15087862 - 15087813
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatc-agtgttttcag 64  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
15087862 acatcacttcagaagtagaactctatctgcttctgatcaagtgttttcag 15087813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 48237687 - 48237732
Alignment:
19 tcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
48237687 tcacttcagaagtagaactctatctacttctgatcagtgttttcag 48237732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 12367606 - 12367678
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca-gttaggagaaattgaataaaaaga 87  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||  ||||||||||  ||| |||||||    
12367606 acatcacttcagaagaagaactctatttgcttctgatcagtgttttcaccttaggagaaaacgaagaaaaaga 12367678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 2914502 - 2914564
Alignment:
13 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||| ||| ||||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
2914502 tggaaatctcttcagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaa 2914564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 8182265 - 8182207
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||| |||||||| ||||||||||||||||||||||| |  |||||||||||||||||    
8182265 acatctcttcagaaatagaactctatctgcttctgatctgcattttcagttaggagaaa 8182207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 13261524 - 13261598
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaagaaa 89  Q
    ||||||||||||||| |||||||||| |||||||||||| ||| ||||| ||||||||||  ||| |||||||||    
13261524 acatcacttcagaagcagaactctatttgcttctgatcaatgtgttcagcttaggagaaaacgaagaaaaagaaa 13261598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 13731522 - 13731584
Alignment:
13 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||| ||||||||||||| |||||||||| ||||||||||| |||||||||| ||||||||||    
13731522 tggaaatcacttcagaagcagaactctatttgcttctgatctgtgttttcagcttaggagaaa 13731584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 15574457 - 15574515
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||| |||||| ||||||||||||||||||||||||| || |||||| ||||||||||    
15574457 acatctcttcagtagtagaactctatctgcttctgatctgtattttcaattaggagaaa 15574515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 10884021 - 10884078
Alignment:
18 atcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||| | |||||||| |||||||||||||||||||||| ||||||||||    
10884021 atcacttcagaagcataactctatttgcttctgatcagtgttttcagcttaggagaaa 10884078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 13302168 - 13302111
Alignment:
18 atcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||| |||||||||| |||||||||| ||||||||||| ||||||||||    
13302168 atcacttcagaagcagaactctatttgcttctgataagtgttttcagcttaggagaaa 13302111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 16155591 - 16155636
Alignment:
18 atcacttcagaagtagaactctatctgcttctgatcagtgttttca 63  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||    
16155591 atcacttcagaagtagaattctatctgcttctgattagtgttttca 16155636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 23443600 - 23443645
Alignment:
171 tgtcataccccaatttttgacctaagaacctacattcatacaccct 216  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||    
23443600 tgtcataccccaatttttgacctaagaccctacattcatacgccct 23443645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 46462129 - 46462084
Alignment:
171 tgtcataccccaatttttgacctaagaacctacattcatacaccct 216  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||    
46462129 tgtcataccccaattttttacctaagaacctagattcatacaccct 46462084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 16317445 - 16317493
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    ||||||||||||||| |||||| ||| ||||||||||||||||||||||    
16317445 acatcacttcagaagcagaactttatttgcttctgatcagtgttttcag 16317493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 22580103 - 22580151
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    |||||| ||||||||||||||| ||||||||| ||||||||||||||||    
22580103 acatcagttcagaagtagaactttatctgcttttgatcagtgttttcag 22580151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 5001711 - 5001770
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||| |||||| ||| ||||||||||||||| |||||| ||||||||||    
5001711 acatcacttcagaagcagaactttatttgcttctgatcagtgctttcagcttaggagaaa 5001770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 9069073 - 9069010
Alignment:
12 atggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||| ||||||||||||| | |||| ||| |||||||||||||||||||||| ||||||||||    
9069073 atggaaatcacttcagaagcaaaactttatttgcttctgatcagtgttttcagcttaggagaaa 9069010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 12175183 - 12175230
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 63  Q
    ||||||||||| |||||||| | |||||||||||||||||||||||||    
12175183 acatcacttcaaaagtagaaatttatctgcttctgatcagtgttttca 12175230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 15820471 - 15820510
Alignment:
171 tgtcataccccaatttttgacctaagaacctacattcata 210  Q
    ||||||||||||||||||||||||||| ||||||||||||    
15820471 tgtcataccccaatttttgacctaagaccctacattcata 15820510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 29936194 - 29936241
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 63  Q
    ||||||||||||||| |||||||||| |||||||||||| ||||||||    
29936194 acatcacttcagaagcagaactctatttgcttctgatcaatgttttca 29936241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 30025243 - 30025184
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||| ||| |||||||||| |||||||||||||||| ||||||||| ||||||||||    
30025243 acatcacatcataagtagaactttatctgcttctgatcaatgttttcagcttaggagaaa 30025184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 30946255 - 30946302
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 63  Q
    ||||||||||||| |||||||||||||||||||| |||||||| ||||    
30946255 acatcacttcagacgtagaactctatctgcttctaatcagtgtattca 30946302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 33421056 - 33421005
Alignment:
23 ttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    |||| ||||| ||||||||| |||||||||| ||||||||||||||||||||    
33421056 ttcaaaagtataactctatccgcttctgatctgtgttttcagttaggagaaa 33421005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 33604213 - 33604154
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||| ||||||| |||| ||||| |||||||||||||||||||||| ||||||||||    
33604213 acatcacgtcagaagcagaattctatttgcttctgatcagtgttttcagcttaggagaaa 33604154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 8913523 - 8913485
Alignment:
171 tgtcataccccaatttttgacctaagaacctacattcat 209  Q
    ||||||||||||||||||||||||||| |||||||||||    
8913523 tgtcataccccaatttttgacctaagatcctacattcat 8913485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 13645763 - 13645701
Alignment:
13 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||| |||| |||||||| |||||||||| ||||||||||| |||||||||| ||||||||||    
13645763 tggaaatcagttcagaagcagaactctatttgcttctgatcggtgttttcagcttaggagaaa 13645701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 13681607 - 13681545
Alignment:
13 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||| ||||||||||||| |||||||||| ||||||| |||| ||||||||| ||||||||||    
13681607 tggaaatcacttcagaagcagaactctatttgcttctaatcaatgttttcagcttaggagaaa 13681545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 23280824 - 23280869
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgtttt 61  Q
    ||||||||| |||||| |||| ||||||||||||||||||||||||    
23280824 acatcactttagaagtggaacactatctgcttctgatcagtgtttt 23280869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 33692571 - 33692616
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgtttt 61  Q
    |||||||||||||||| ||||||||||| |||||||||| ||||||    
33692571 acatcacttcagaagtggaactctatctacttctgatcaatgtttt 33692616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 2266418 - 2266470
Alignment:
22 cttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||||||||||||||| |||||||||||||  ||||||||| |||| |||||    
2266418 cttcagaagtagaactcaatctgcttctgatttgtgttttcaattagaagaaa 2266470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 48063666 - 48063718
Alignment:
22 cttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    |||||||||||||||||||||||||| ||| | |  |||||||||||||||||    
48063666 cttcagaagtagaactctatctgcttttgaactgcattttcagttaggagaaa 48063718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 11318707 - 11318656
Alignment:
13 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    |||| |||||||||||||  ||||||||| | ||||||||||||||||||||    
11318707 tggaaatcacttcagaagccgaactctattttcttctgatcagtgttttcag 11318656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 14424816 - 14424765
Alignment:
23 ttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    |||||||||||||||||||||||||||||   |  |||||||||||||||||    
14424816 ttcagaagtagaactctatctgcttctgaattgcattttcagttaggagaaa 14424765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 32265559 - 32265594
Alignment:
16 acatcacttcagaagtagaactctatctgcttctga 51  Q
    ||||| ||||||||||||||||||||||||||||||    
32265559 acatctcttcagaagtagaactctatctgcttctga 32265594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 13259292 - 13259366
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaagaaa 89  Q
    ||||||||| ||||| |||||||||| |  |||||||||||||| |||| ||||||||||  ||| |||||||||    
13259292 acatcactttagaagcagaactctatttatttctgatcagtgttgtcagcttaggagaaaacgaagaaaaagaaa 13259366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 197
Target Start/End: Original strand, 12583625 - 12583654
Alignment:
168 gcctgtcataccccaatttttgacctaaga 197  Q
    ||||||||||||||||||||||||||||||    
12583625 gcctgtcataccccaatttttgacctaaga 12583654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 13424766 - 13424807
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtg 57  Q
    |||||||||||||||  ||||||||| |||||||||||||||    
13424766 acatcacttcagaagctgaactctatatgcttctgatcagtg 13424807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 24787672 - 24787600
Alignment:
12 atggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaa 84  Q
    ||||| ||||||||||||| |||||||||| ||| ||| || ||||||||||| |||||||||| |||| ||||    
24787672 atggaaatcacttcagaagaagaactctatttgc-tctaataagtgttttcagcttaggagaaaatgaagaaaa 24787600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 1292351 - 1292303
Alignment:
26 agaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    |||||||||| ||||||||||||||| | |  |||||||||||||||||    
1292351 agaagtagaattctatctgcttctgaactgcattttcagttaggagaaa 1292303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 16310804 - 16310852
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    ||||||||||||||| |||| | ||| |||||||||| |||||||||||    
16310804 acatcacttcagaagcagaattatatttgcttctgattagtgttttcag 16310852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 51
Target Start/End: Original strand, 48806736 - 48806764
Alignment:
23 ttcagaagtagaactctatctgcttctga 51  Q
    |||||||||||||||||||||||||||||    
48806736 ttcagaagtagaactctatctgcttctga 48806764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 2e-23; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 52283106 - 52283035
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaag 86  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||    
52283106 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaataaaaag 52283035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 40799201 - 40799127
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaagaaa 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||| |||||||||    
40799201 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagaaa 40799127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 6090039 - 6089980
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
6090039 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 6089980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 14968680 - 14968621
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
14968680 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 14968621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 29952283 - 29952342
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
29952283 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 29952342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 30001437 - 30001496
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
30001437 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 30001496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 47206974 - 47206915
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
47206974 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 47206915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 5212870 - 5212818
Alignment:
22 cttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
5212870 cttcagaagtagaactctatctgcttctgatctgtgttttcagttaggagaaa 5212818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 1241921 - 1241980
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
1241921 acatcacttcagaagtagaaatctatctgcttctgatcagtgttttcagcttaggagaaa 1241980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 12727082 - 12727141
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
12727082 acatcacttcagaagtagaattctatctgcttctgatcagtgttttcagcttaggagaaa 12727141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 14954721 - 14954662
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
14954721 acattacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 14954662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 20628308 - 20628367
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
20628308 acatcacttcagaagtagaactctatctgcttctgatcactgttttcagcttaggagaaa 20628367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 24776358 - 24776405
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
24776358 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 24776405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 49554356 - 49554415
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
49554356 acatcacttcagaagtagaactctatctgcttctgatcaatgttttcagcttaggagaaa 49554415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 11222107 - 11222049
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaa 73  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
11222107 acatcactttagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaa 11222049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 11222859 - 11222801
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaa 73  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
11222859 acatcactttagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaa 11222801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 21639128 - 21639186
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||    
21639128 acatctcttcagaagtagaactctatctgcttctgatctgtattttcagttaggagaaa 21639186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 35491055 - 35491101
Alignment:
170 ctgtcataccccaatttttgacctaagaacctacattcatacaccct 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
35491055 ctgtcataccccaatttttgacctaagaacctacattcatacaccct 35491101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 18122494 - 18122542
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||    
18122494 acatcacttcagaagtagaactctatctgctcctgatcagtgttttcag 18122542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 19885924 - 19885996
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaaga 87  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||  ||| |||||||    
19885924 acatcacttcagaagtagaactctatttgcttctgataagtgttttcagcttaggagaaaacgaagaaaaaga 19885996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 22804867 - 22804914
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 63  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
22804867 acatcacttcaaaagtagaactctatctgcttctgatcagtgttttca 22804914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 25399101 - 25399160
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttc-agttaggagaaa 74  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||    
25399101 acatcacttcagaagtagaactctatctgcttctgattagtgttttcgacttaggagaaa 25399160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 109 - 168
Target Start/End: Complemental strand, 27444863 - 27444804
Alignment:
109 ccttccttggtgaaataagcttcgatgcggctgtaccatgctcgtggtgcttgtttaagg 168  Q
    |||||||| |||||||| ||||| |||||||||||||||||||||||||| |||||||||    
27444863 ccttcctttgtgaaataggcttcaatgcggctgtaccatgctcgtggtgcctgtttaagg 27444804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 38178491 - 38178550
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||    
38178491 acatcacttcagaagaagaactctatctgcttctgattagtgttttcagcttaggagaaa 38178550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 19889782 - 19889844
Alignment:
13 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||||||||||||||||| |||||||||| ||||||| |||||||||||||| ||||||||||    
19889782 tggacatcacttcagaagcagaactctatttgcttctaatcagtgttttcagcttaggagaaa 19889844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 46797241 - 46797299
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||| |||||||||||||||||||||||||||||||  || |||||||||||||||||    
46797241 acatctcttcagaagtagaactctatctgcttctgatttgtattttcagttaggagaaa 46797299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 31302657 - 31302612
Alignment:
19 tcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
31302657 tcactttagaagtagaactctatctgcttctgatcagtgttttcag 31302612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 2782797 - 2782749
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||    
2782797 acatcacttcagaagtagaattctatctgattctgatcagtgttttcag 2782749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 2783187 - 2783139
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||    
2783187 acatcacttcagaagtagaattctatctgattctgatcagtgttttcag 2783139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 11189304 - 11189257
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 63  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||    
11189304 acatcacttcataagtagaactctatcttcttctgatcagtgttttca 11189257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 14393841 - 14393888
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 63  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||    
14393841 acatcacttcagaagtagaactctattttcttctgatcagtgttttca 14393888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 29854721 - 29854663
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||    
29854721 acatcacttcagatgtagaactctatctgcttctgatc-gtgttttcagtttaggagaaa 29854663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 47406263 - 47406322
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||| |||||| ||||||||| |||||||||||||||||||| ||||||||||    
47406263 acatcacttcacaagtagcactctatctccttctgatcagtgttttcagcttaggagaaa 47406322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 50299549 - 50299502
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 63  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||    
50299549 acatcagttcagaagtagaaatctatctgcttctgatcagtgttttca 50299502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 52919735 - 52919676
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||| || ||||||||||||||||| |||||||||||||||| ||||||||||    
52919735 acatcacttcaaaaatagaactctatctgcttgtgatcagtgttttcagcttaggagaaa 52919676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 2560496 - 2560450
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttc 62  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||    
2560496 acatcacttcaaaagtagaactctatctgcttcttatcagtgttttc 2560450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 41494312 - 41494254
Alignment:
17 catcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||| ||||||||||| | |||||||||||||||||||| ||||||||||    
41494312 catcacttcagaaatagaactctatttacttctgatcagtgttttcagcttaggagaaa 41494254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 13823379 - 13823322
Alignment:
18 atcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||||||||||| ||||||| |||||||||||||||||||||||| | ||||||||||    
13823379 atcacttcagaattagaactttatctgcttctgatcagtgttttcggcttaggagaaa 13823322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 17667676 - 17667611
Alignment:
21 acttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaa 85  Q
    |||||||||| |||||||||| ||||| |||||||||||||||| |||||||||| |||| |||||    
17667676 acttcagaagcagaactctatttgcttatgatcagtgttttcagcttaggagaaaatgaagaaaaa 17667611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 2025397 - 2025345
Alignment:
22 cttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    |||||||||||||||||||||||||||||| | |  |||||||||||||||||    
2025397 cttcagaagtagaactctatctgcttctgaactgcattttcagttaggagaaa 2025345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 49669338 - 49669390
Alignment:
22 cttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    |||||||||||||||||||||||||||||||| ||  ||||| ||||||||||    
49669338 cttcagaagtagaactctatctgcttctgatctgtactttcaattaggagaaa 49669390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 53057571 - 53057619
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    |||||||||||||||||||||||||||| |||||||| || ||||||||    
53057571 acatcacttcagaagtagaactctatctacttctgattagagttttcag 53057619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 16031814 - 16031739
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaagaaat 90  Q
    |||| ||||||||||| ||||||||| ||||||||||||||  |||||| ||||||||||  ||| ||||||||||    
16031814 acattacttcagaagtggaactctatttgcttctgatcagtaatttcagcttaggagaaaaagaagaaaaagaaat 16031739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 15902509 - 15902447
Alignment:
13 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||| ||||||||||||| |||||| ||| ||| |||||||||||||||||| ||||||||||    
15902509 tggaaatcacttcagaagcagaactttatttgcctctgatcagtgttttcagcttaggagaaa 15902447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 49643607 - 49643669
Alignment:
13 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||| ||||||||| ||| |||||||||| ||||| |||||||||||||||| ||||||||||    
49643607 tggaaatcacttcataagcagaactctatttgcttttgatcagtgttttcagcttaggagaaa 49643669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 8874971 - 8875019
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    ||||||||||||||| | |||| ||| ||||||||||||||||||||||    
8874971 acatcacttcagaagcaaaactttatttgcttctgatcagtgttttcag 8875019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 14310987 - 14310932
Alignment:
18 atcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    |||||||||||||  | ||||||||||||||||||||||| |||||| |||||||||    
14310987 atcacttcagaagctggactctatctgcttctgatcagtgatttcag-taggagaaa 14310932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 17218159 - 17218119
Alignment:
171 tgtcataccccaatttttgacctaagaacctacattcatac 211  Q
    ||||||||||||||||||||||||| | |||||||||||||    
17218159 tgtcataccccaatttttgacctaacaccctacattcatac 17218119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 17239775 - 17239834
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||| ||| |||||||||| ||||| |||||| ||||||||| ||||||||||    
17239775 acatcacttcaaaagcagaactctatttgcttttgatcattgttttcagcttaggagaaa 17239834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 30055022 - 30055057
Alignment:
16 acatcacttcagaagtagaactctatctgcttctga 51  Q
    ||||| ||||||||||||||||||||||||||||||    
30055022 acatctcttcagaagtagaactctatctgcttctga 30055057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 33582530 - 33582483
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 63  Q
    |||||||||||||| ||||| ||||||| ||||| |||||||||||||    
33582530 acatcacttcagaattagaaatctatctacttcttatcagtgttttca 33582483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 46350687 - 46350734
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 63  Q
    |||||| |||| |||||||||||||||||||||| |||||| ||||||    
46350687 acatcatttcaaaagtagaactctatctgcttctcatcagtattttca 46350734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 16017528 - 16017486
Alignment:
169 cctgtcataccccaatttttgacctaagaacctacattcatac 211  Q
    ||||||||||| ||||||||||||||||| || ||||||||||    
16017528 cctgtcataccacaatttttgacctaagaccccacattcatac 16017486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 19250236 - 19250293
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    |||||||||||||||| ||||||||||||||| |||| ||||  ||||| |||||||||    
19250236 acatcacttcagaagtggaactctatctgcttttgattagtgacttcag-taggagaaa 19250293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 12963934 - 12964003
Alignment:
18 atcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaag 86  Q
    ||||||||  ||| |||||||||| ||||||| |||||||||||||| | |||||||| |||| ||||||    
12963934 atcacttcgtaagcagaactctatttgcttcttatcagtgttttcagctgaggagaaaatgaagaaaaag 12964003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 20724348 - 20724307
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtg 57  Q
    |||||||||||||||  ||| |||||||||||||||||||||    
20724348 acatcacttcagaagctgaaatctatctgcttctgatcagtg 20724307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 44363522 - 44363482
Alignment:
171 tgtcataccccaatttttgacctaagaacctacattcatac 211  Q
    |||||||||| |||||||||| ||||| |||||||||||||    
44363522 tgtcataccctaatttttgacttaagatcctacattcatac 44363482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 9e-23; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 45539331 - 45539405
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaagaaa 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||| |||||||||    
45539331 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagaaa 45539405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 36104651 - 36104578
Alignment:
13 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaattgaataaaaag 86  Q
    |||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||| ||||||    
36104651 tggacatctcttcagaagtagaactcaatctgcttctgatctgtgttttcagttaggagaaaatgaagaaaaag 36104578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 16206535 - 16206476
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
16206535 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 16206476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 9319876 - 9319806
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaa 85  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||  |||||||||    
9319876 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttagaagaaaaagaataaaaa 9319806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 31445406 - 31445358
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
31445406 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 31445358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 17796721 - 17796662
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
17796721 acatcacttcagaagtataactctatctgcttctgatcagtgttttcagcttaggagaaa 17796662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 30422277 - 30422336
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
30422277 acatcacttcagaagtagaactctatttgcttctgatcagtgttttcagcttaggagaaa 30422336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 15336934 - 15336992
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||    
15336934 acatcacttcagaagcagaactctatctgctcctgatcagtgatttcagttaggagaaa 15336992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 15425999 - 15426057
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||    
15425999 acatcacttcagaagcagaactctatctgctcctgatcagtgatttcagttaggagaaa 15426057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 15517303 - 15517361
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||    
15517303 acatcacttcagaagcagaactctatctgctcctgatcagtgatttcagttaggagaaa 15517361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 22673080 - 22673022
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||    
22673080 acatctcttcagaagtagaactctatctgcttctgatctgtattttcagttaggagaaa 22673022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 17442694 - 17442742
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
17442694 acatcacttcagaagtagaactctatttgcttctgatcagtgttttcag 17442742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 23185593 - 23185641
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
23185593 acatcgcttcagaagtagaactctatctgcttctgatcagtgttttcag 23185641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 18121980 - 18122027
Alignment:
17 catcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
18121980 catcacttcagaagtagaactctatctgcttctgatcaatgttttcag 18122027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 23264474 - 23264533
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||    
23264474 acatcacttcagaagtagaattctatctacttctgatcagtgttttcagcttaggagaaa 23264533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 17541333 - 17541406
Alignment:
13 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaa 85  Q
    |||| ||||||||||||| |||||| ||| |||||||||||||||||||||| |||||||||| |||| |||||    
17541333 tggaaatcacttcagaagcagaactatatttgcttctgatcagtgttttcagcttaggagaaaatgaagaaaaa 17541406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 6407054 - 6407006
Alignment:
26 agaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||    
6407054 agaagtagaactctatctgcttctgatctgtattttcagttaggagaaa 6407006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 29692620 - 29692568
Alignment:
12 atggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||||||||||||    
29692620 atggaaatcacttcagaagcagaactctatttgcttctgatcagtgttttcag 29692568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 19942539 - 19942481
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||    
19942539 acatcacttcagaagtagaactctatctgctt-tgatcggtgttttcagcttaggagaaa 19942481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 25163375 - 25163316
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||| |||||||| | |||||||||||||||||||||| ||||||||||    
25163375 acatcacttcagaagcagaactctgtttgcttctgatcagtgttttcagcttaggagaaa 25163316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 14990935 - 14990993
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||| |||||||||||||||||||| ||||||||| | || |||||||||||||||||    
14990935 acatctcttcagaagtagaactctatatgcttctgacctgtattttcagttaggagaaa 14990993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 17007617 - 17007555
Alignment:
13 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||| ||||||||||||| |||||| ||| |||||||||||||||||||||| ||||||||||    
17007617 tggaaatcacttcagaagcagaactatatttgcttctgatcagtgttttcagcttaggagaaa 17007555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 18152550 - 18152608
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||| |||||||||||||||||||||||||||||||| || |||| ||||| ||||||    
18152550 acatctcttcagaagtagaactctatctgcttctgatctgtatttttagttacgagaaa 18152608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 19153331 - 19153269
Alignment:
13 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||| ||||||||||||| | |||||||| |||||||||||||||||||||| ||||||||||    
19153331 tggaaatcacttcagaagcataactctatttgcttctgatcagtgttttcagcttaggagaaa 19153269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 20256356 - 20256406
Alignment:
13 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttca 63  Q
    |||| ||||||||||||| |||||||||| |||||||||||||||||||||    
20256356 tggaaatcacttcagaagcagaactctatttgcttctgatcagtgttttca 20256406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 20256441 - 20256491
Alignment:
13 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttca 63  Q
    |||| ||||||||||||| |||||||||| |||||||||||||||||||||    
20256441 tggaaatcacttcagaagcagaactctatttgcttctgatcagtgttttca 20256491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 19706815 - 19706774
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtg 57  Q
    |||||||||||||||| |||||||||||||||||||||||||    
19706815 acatcacttcagaagttgaactctatctgcttctgatcagtg 19706774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 35028324 - 35028372
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    ||||||||||| |||||||||| |||||| |||||||||||||||||||    
35028324 acatcacttcataagtagaactatatctgtttctgatcagtgttttcag 35028372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 12758586 - 12758648
Alignment:
13 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||| ||||||| ||||| | |||||||| |||||||||||||||||||||| ||||||||||    
12758586 tggaaatcactttagaagcaaaactctatttgcttctgatcagtgttttcagtttaggagaaa 12758648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 22662375 - 22662317
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||| |||||||||||||||||||||||||||||||| || ||||   ||||||||||    
22662375 acatctcttcagaagtagaactctatctgcttctgatctgtatttttgtttaggagaaa 22662317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 40846262 - 40846308
Alignment:
28 aagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||| |||||||||||||||||||| || |||||||||||||||||    
40846262 aagtataactctatctgcttctgatctgtattttcagttaggagaaa 40846308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 43644185 - 43644116
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaattgaataaaaag 86  Q
    |||||||||||||||  |||||||||||||||||||||||||  ||||| ||||| ||| |||| ||||||    
43644185 acatcacttcagaagctgaactctatctgcttctgatcagtgaattcag-taggaaaaaatgaaaaaaaag 43644116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 21932180 - 21932135
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgtttt 61  Q
    |||| ||||||||||| || ||||||||||||||||||||||||||    
21932180 acattacttcagaagtggatctctatctgcttctgatcagtgtttt 21932135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 27808648 - 27808608
Alignment:
171 tgtcataccccaatttttgacctaagaacctacattcatac 211  Q
    ||||||||||||||||||||||||||| ||| |||||||||    
27808648 tgtcataccccaatttttgacctaagaccctgcattcatac 27808608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 43639052 - 43639000
Alignment:
22 cttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    |||||||||||||||||||||||||| ||| | |  |||||||||||||||||    
43639052 cttcagaagtagaactctatctgcttatgaactgcattttcagttaggagaaa 43639000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 15934505 - 15934552
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 63  Q
    ||||||||| |||||| ||||||||||||||| ||||||||| |||||    
15934505 acatcactttagaagttgaactctatctgcttttgatcagtgatttca 15934552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 16682097 - 16682159
Alignment:
13 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||| |||||||||||||  ||||| ||| |||||||||||| ||||||||| ||||||||||    
16682097 tggaaatcacttcagaagccgaactatatttgcttctgatcattgttttcagcttaggagaaa 16682159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 24655406 - 24655368
Alignment:
171 tgtcataccccaatttttgacctaagaacctacattcat 209  Q
    ||||||||||||||||||||| ||||| |||||||||||    
24655406 tgtcataccccaatttttgacgtaagatcctacattcat 24655368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 1744499 - 1744462
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatc 53  Q
    ||||| |||||||||||||| |||||||||||||||||    
1744499 acatctcttcagaagtagaattctatctgcttctgatc 1744462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 13431465 - 13431498
Alignment:
16 acatcacttcagaagtagaactctatctgcttct 49  Q
    ||||| ||||||||||||||||||||||||||||    
13431465 acatctcttcagaagtagaactctatctgcttct 13431498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 51
Target Start/End: Original strand, 33561068 - 33561096
Alignment:
23 ttcagaagtagaactctatctgcttctga 51  Q
    |||||||||||||||||||||||||||||    
33561068 ttcagaagtagaactctatctgcttctga 33561096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 9e-23; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 25449357 - 25449415
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
25449357 acatcacttcagaagtataactctatctgcttctgatcagtgttttcagttaggagaaa 25449415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 1577158 - 1577110
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
1577158 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 1577110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 23037293 - 23037341
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
23037293 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 23037341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 1899656 - 1899597
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
1899656 acatcactttagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 1899597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 2266395 - 2266336
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
2266395 acatcacttcagaagtagaactctatctgattctgatcagtgttttcagcttaggagaaa 2266336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 2833965 - 2833906
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
2833965 acatcacttcagaagtagagctctatctgcttctgatcagtgttttcagcttaggagaaa 2833906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 22428108 - 22428167
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
22428108 acatcatttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 22428167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 109 - 168
Target Start/End: Complemental strand, 12795146 - 12795087
Alignment:
109 ccttccttggtgaaataagcttcgatgcggctgtaccatgctcgtggtgcttgtttaagg 168  Q
    |||||||| |||||||| ||||| |||||||||||||||||||||||||| |||||||||    
12795146 ccttcctttgtgaaataggcttcaatgcggctgtaccatgctcgtggtgcctgtttaagg 12795087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 14294052 - 14294123
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaag 86  Q
    ||||||||| ||||||| |||||||||| |||||||||||||||||||| |||||||||| |||| ||||||    
14294052 acatcactttagaagtataactctatctccttctgatcagtgttttcagcttaggagaaaatgaagaaaaag 14294123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 22600956 - 22601015
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca-gttaggagaaa 74  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||    
22600956 acatcacttcagaagtagaactctatctgattctgatcaatgttttcaggttaggagaaa 22601015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 30892374 - 30892303
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaag 86  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||| |||| |||||| ||| ||||||    
30892374 acatcactttagaagtagaactctatttgcttctgatcagtgttttcagcttagaagaaatcgaagaaaaag 30892303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 38281672 - 38281613
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||    
38281672 acatcacttcagaagtagaactatatctgtttctgatcagtgttttcagcttaggagaaa 38281613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 7309099 - 7309041
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||||||| ||||| |||| ||||| ||||||||||||||||||||||||||||||||    
7309099 acatcactttagaagcagaattctatttgcttctgatcagtgttttcagttaggagaaa 7309041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 29215107 - 29215061
Alignment:
18 atcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||    
29215107 atcacttcagaagtggaactctatctgcttctgatcagtgttttcag 29215061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 30571511 - 30571453
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||| ||||||||||||||||||| |||||||||||| || |||||||||||||||||    
30571511 acatctcttcagaagtagaactctacctgcttctgatctgtattttcagttaggagaaa 30571453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 44824523 - 44824581
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||| ||||||||||||||||  |||||||||||||| ||||||||||||||||||||    
44824523 acatctcttcagaagtagaactacatctgcttctgatctgtgttttcagttaggagaaa 44824581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 51967950 - 51967995
Alignment:
171 tgtcataccccaatttttgacctaagaacctacattcatacaccct 216  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
51967950 tgtcataccccaattttttacctaagaacctacattcatacaccct 51967995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 22153135 - 22153087
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||    
22153135 acatcacttcagaagtagaactctatctgcttctgatcaaagttttcag 22153087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 14264198 - 14264243
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgtttt 61  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||    
14264198 acatcacttcagaagtagaattctatctgcttttgatcagtgtttt 14264243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 15473912 - 15473867
Alignment:
171 tgtcataccccaatttttgacctaagaacctacattcatacaccct 216  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||    
15473912 tgtcataccccaatttttgacctaagagcatacattcatacaccct 15473867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 32786708 - 32786752
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttt 60  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||    
32786708 acatcacttcagaagtggaactttatctgcttctgatcagtgttt 32786752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 22202526 - 22202601
Alignment:
13 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaaga 87  Q
    |||| ||||| ||||||| |||||||||| ||||| |||||||||||||||| ||||||||||  ||| |||||||    
22202526 tggaaatcacgtcagaagcagaactctatttgcttatgatcagtgttttcagtttaggagaaaacgaagaaaaaga 22202601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 22202648 - 22202723
Alignment:
13 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaaga 87  Q
    |||| ||||| ||||||| |||||||||| ||||| |||||||||||||||| ||||||||||  ||| |||||||    
22202648 tggaaatcacgtcagaagcagaactctatttgcttatgatcagtgttttcagtttaggagaaaacgaagaaaaaga 22202723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 22465582 - 22465653
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaag 86  Q
    |||||||||||||||||||||||   || |||||||||||||||||||| ||||||| ||  ||||||||||    
22465582 acatcacttcagaagtagaactccgcctacttctgatcagtgttttcagcttaggagtaaacgaataaaaag 22465653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 10250302 - 10250244
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||| ||| |||||||||||||||| ||||| ||||| || |||||||||||||||||    
10250302 acatctctttagaagtagaactctatatgcttttgatctgtattttcagttaggagaaa 10250244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 48571022 - 48571080
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||| ||| ||||||||||||||||||| |||| ||| || |||||||||||||||||    
48571022 acatctctttagaagtagaactctatctgtttctaatctgtattttcagttaggagaaa 48571080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 12625318 - 12625359
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtg 57  Q
    |||||||||||||||| |||||||||||||||||||| ||||    
12625318 acatcacttcagaagttgaactctatctgcttctgatgagtg 12625359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 74
Target Start/End: Original strand, 20959819 - 20959859
Alignment:
35 actctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||||||||||||||||||||||||||||| ||||||||||    
20959819 actctatctgcttctgatcagtgttttcagcttaggagaaa 20959859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 21983908 - 21983873
Alignment:
16 acatcacttcagaagtagaactctatctgcttctga 51  Q
    ||||| ||||||||||||||||||||||||||||||    
21983908 acatctcttcagaagtagaactctatctgcttctga 21983873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 46088294 - 46088243
Alignment:
23 ttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    |||||||||||||||||||||| |||||| | |  |||||||||||||||||    
46088294 ttcagaagtagaactctatctgattctgaactgcattttcagttaggagaaa 46088243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 2267975 - 2267933
Alignment:
20 cacttcagaagtagaactctatctgcttctgatcagtgttttc 62  Q
    ||||| |||||||||||| |||||||||||||||||| |||||    
2267975 cactttagaagtagaactatatctgcttctgatcagtattttc 2267933  T

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Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 17025772 - 17025813
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtg 57  Q
    ||||||||| |||| | |||||||||||||||||||||||||    
17025772 acatcactttagaaattgaactctatctgcttctgatcagtg 17025813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 19214913 - 19214860
Alignment:
22 cttcagaagtagaactctatctgcttctgatc-agtgttttcagttaggagaaa 74  Q
    |||| |||||||| |||||||||||||||| | ||||||||||| |||||||||    
19214913 cttctgaagtagatctctatctgcttctgaacaagtgttttcagataggagaaa 19214860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 28493092 - 28493137
Alignment:
18 atcacttcagaagtagaactctatctgcttctgatcagtgttttca 63  Q
    ||||||||||||| |||||||||| ||||| ||||| |||||||||    
28493092 atcacttcagaagcagaactctatttgcttatgatctgtgttttca 28493137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 20521424 - 20521388
Alignment:
173 tcataccccaatttttgacctaagaacctacattcat 209  Q
    ||||||||||||||||||||||||| | |||||||||    
20521424 tcataccccaatttttgacctaagatcatacattcat 20521388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 36133520 - 36133472
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    ||||||||||| ||||| |||||||||  ||| ||||||||||||||||    
36133520 acatcacttcataagtaaaactctatcgacttatgatcagtgttttcag 36133472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 44911007 - 44910963
Alignment:
170 ctgtcataccccaatttttgacctaagaacctacattcatacacc 214  Q
    ||||||||  ||||||||| ||||||||||| |||||||||||||    
44911007 ctgtcatattccaattttttacctaagaacccacattcatacacc 44910963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 2767 - 2694
Alignment:
13 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaattgaataaaaag 86  Q
    |||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||| ||||||    
2767 tggacatctcttcagaagtagaactcaatctgcttctgatctgtgttttcagttaggagaaaatgaagaaaaag 2694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 5e-21; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 10631446 - 10631387
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
10631446 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 10631387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 13435194 - 13435135
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
13435194 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 13435135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 20731546 - 20731617
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaag 86  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||  ||||||||||    
20731546 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttagtagaaaaagaataaaaag 20731617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 24717659 - 24717733
Alignment:
18 atcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggag--aaattgaataaaaagaaa 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||| |||||||||    
24717659 atcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaattgaagaaaaagaaa 24717733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 16333038 - 16332980
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
16333038 acatcacttcagaagtagaactctatctgcttctgatctgtattttcagttaggagaaa 16332980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 21617562 - 21617504
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
21617562 acatctcttcagaagtagaactctatctgcttctgatctgtgttttcagttaggagaaa 21617504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 17380872 - 17380813
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
17380872 acatcacttcagaagtagaactctatttgcttctgatcagtgttttcagcttaggagaaa 17380813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 21234465 - 21234406
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
21234465 acatcacttcagaagtagaattctatctgcttctgatcagtgttttcagcttaggagaaa 21234406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 21624401 - 21624342
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
21624401 acatcacttcagaagtaaaactctatctgcttctgatcagtgttttcagcttaggagaaa 21624342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 32543572 - 32543513
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca-gttaggagaaa 74  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
32543572 acatcacttcagaagtggaactctatctgcttctgatcagtgttttcaggttaggagaaa 32543513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 19833829 - 19833887
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||    
19833829 acatcacttcagaggtggtactctatctgcttctgatcagtgttttcagttaggagaaa 19833887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 22077211 - 22077269
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||    
22077211 acatctcttcagaagtagaactctatctgcttctgatctgtattttcagttaggagaaa 22077269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 18909125 - 18909170
Alignment:
171 tgtcataccccaatttttgacctaagaacctacattcatacaccct 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
18909125 tgtcataccccaatttttgacctaagaacctacattcatacaccct 18909170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 20113473 - 20113533
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatc-agtgttttcag-ttaggagaaa 74  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
20113473 acatcacttcagaagtagaactctatctgcttctgatcaagtgttttcagcttaggagaaa 20113533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 14101284 - 14101343
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||    
14101284 acatcacttcataagtagaactctatctgcttctgatcagtattttcagcttaggagaaa 14101343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 15532470 - 15532529
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||    
15532470 acatcacttcagaagtagaactctatttgctcctgatcagtgttttcagcttaggagaaa 15532529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 18434819 - 18434748
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaag 86  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||| || ||||||| |||| ||||||    
18434819 acatcacttcagaagtagaactctatctgcttctgattagtgtttccagctttggagaaaatgaagaaaaag 18434748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 19688042 - 19687995
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 63  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
19688042 acatcacttcagaagtagaactttatctgcttctgatcagtgttttca 19687995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 22801452 - 22801409
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgtt 59  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
22801452 acatcacttcagaagtagaactctatctgcttctgatcagtgtt 22801409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 13601479 - 13601417
Alignment:
13 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||| ||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
13601479 tggaaatcacttcagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaa 13601417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 16876217 - 16876159
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||||||||||||| |||||||||||| || |||||||||||||||||||| ||||||    
16876217 acatcacttcagaagcagaactctatctactcctgatcagtgttttcagttaagagaaa 16876159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 22232642 - 22232596
Alignment:
170 ctgtcataccccaatttttgacctaagaacctacattcatacaccct 216  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
22232642 ctgtcataccccaatttttaacctaagaacctacattcatacaccct 22232596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 3917632 - 3917587
Alignment:
171 tgtcataccccaatttttgacctaagaacctacattcatacaccct 216  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
3917632 tgtcataccccaatttttaacctaagaacctacattcatacaccct 3917587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 9717135 - 9717088
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 63  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||    
9717135 acatcacttcagaagtggaactctatctgcttttgatcagtgttttca 9717088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 15301531 - 15301468
Alignment:
12 atggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||| ||||||| ||||| |||||||||| |||||||||||||||||||||| ||||||||||    
15301531 atggaaatcactttagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaa 15301468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 16528624 - 16528577
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 63  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||    
16528624 acatcacttcagaaatagaactctatctgcttcttatcagtgttttca 16528577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 7762947 - 7762890
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    |||||||||||||||  ||||||||||||||||||||||||| |||||| |||||||||    
7762947 acatcacttcagaagctgaactctatctgcttctgatcagtgatttcag-taggagaaa 7762890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 12422550 - 12422492
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||| |||||||||||||||||| ||||||||| ||  ||||||||||||||||||||    
12422550 acatctcttcagaagtagaactctttctgcttctaatatgtgttttcagttaggagaaa 12422492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 14780019 - 14779974
Alignment:
171 tgtcataccccaatttttgacctaagaacctacattcatacaccct 216  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||    
14780019 tgtcatacaccaatttttgacctaaggacctacattcatacaccct 14779974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 15986671 - 15986626
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgtttt 61  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||    
15986671 acatcacttcataagtagaactctatctgtttctgatcagtgtttt 15986626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 18377736 - 18377688
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    ||||||||||||||||||||||||||||| || |||||||| |||||||    
18377736 acatcacttcagaagtagaactctatctgtttttgatcagtattttcag 18377688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 19085440 - 19085393
Alignment:
17 catcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    |||||||||||||| |||||||||| ||||||| ||||||||||||||    
19085440 catcacttcagaagcagaactctatttgcttcttatcagtgttttcag 19085393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 19623296 - 19623237
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||| || ||||||| ||||||||||||||||||| || ||||||||||    
19623296 acatcacttcagaagcaggactctatttgcttctgatcagtgtttttagcttaggagaaa 19623237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 17304106 - 17304163
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    |||||||||||||||  |||||||||||||||||||||||||  ||||| |||||||||    
17304106 acatcacttcagaagctgaactctatctgcttctgatcagtgacttcag-taggagaaa 17304163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 19469938 - 19469881
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    |||||||||||||||| |||||||||||| ||||||||||||  ||||| |||||||||    
19469938 acatcacttcagaagtggaactctatctgtttctgatcagtgacttcag-taggagaaa 19469881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 25593383 - 25593321
Alignment:
13 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||| ||||||||| ||| | |||||||| |||||||||||||||||||||| ||||||||||    
25593383 tggaaatcacttcataagcataactctatttgcttctgatcagtgttttcagcttaggagaaa 25593321  T

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Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 3680411 - 3680362
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagt 65  Q
    ||||||| |||||||  ||||||||||||||||||||||||| |||||||    
3680411 acatcacctcagaagctgaactctatctgcttctgatcagtgatttcagt 3680362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 12041170 - 12041125
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgtttt 61  Q
    ||||||||| |||||||||||||||||||||| ||||||| |||||    
12041170 acatcactttagaagtagaactctatctgcttttgatcagggtttt 12041125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 19952434 - 19952483
Alignment:
24 tcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggaga 72  Q
    ||||||||||||||||||||||||||||| ||| ||||||| ||||||||    
19952434 tcagaagtagaactctatctgcttctgattagtattttcagcttaggaga 19952483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 19066854 - 19066889
Alignment:
16 acatcacttcagaagtagaactctatctgcttctga 51  Q
    ||||| ||||||||||||||||||||||||||||||    
19066854 acatctcttcagaagtagaactctatctgcttctga 19066889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 21750720 - 21750681
Alignment:
171 tgtcataccccaatttttgacctaagaacctacattcata 210  Q
    ||||||||||||||||||||||||||| || |||||||||    
21750720 tgtcataccccaatttttgacctaagaccccacattcata 21750681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 33353093 - 33353160
Alignment:
22 cttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaattgaataaaaagaaa 89  Q
    |||||||||||||||||||||||||||||| | |  ||||||||||  |||||  ||| |||||||||    
33353093 cttcagaagtagaactctatctgcttctgaactgcattttcagttacaagaaaaagaagaaaaagaaa 33353160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 12348850 - 12348792
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||| ||||| |||||||| ||||||||||| ||||| || |||||||||| ||||||    
12348850 acatctcttcaaaagtagaattctatctgcttatgatctgtattttcagttatgagaaa 12348792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 14732952 - 14733014
Alignment:
13 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||| ||||||||||||| | |||||||| || |||||||||||||||| || ||||||||||    
14732952 tggaaatcacttcagaagcataactctatttgtttctgatcagtgtttttagcttaggagaaa 14733014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 51
Target Start/End: Complemental strand, 26588903 - 26588875
Alignment:
23 ttcagaagtagaactctatctgcttctga 51  Q
    |||||||||||||||||||||||||||||    
26588903 ttcagaagtagaactctatctgcttctga 26588875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 29917347 - 29917307
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagt 56  Q
    |||||| ||||||||| |||||||||||||||| |||||||    
29917347 acatcagttcagaagtggaactctatctgcttccgatcagt 29917307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 5e-21; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 7746524 - 7746583
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
7746524 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 7746583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 23880321 - 23880273
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
23880321 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 23880273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 6498623 - 6498564
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
6498623 acatcacttcagaagtagaactctatctgcttctaatcagtgttttcagcttaggagaaa 6498564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 33021968 - 33021909
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
33021968 acatcacttcggaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 33021909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 11993197 - 11993139
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||    
11993197 acatcacttcagaagcagaactctatctgctcctgatcagtgtttttagttaggagaaa 11993139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 21100578 - 21100648
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaa 85  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||| |||| |||||    
21100578 acatcacttcaaaagtggaactctatctgcttctgatcagtgttttcagcttaggagaaaatgaagaaaaa 21100648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 26764779 - 26764721
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||    
26764779 acatctcttcagaagtagaactctatctgcttctgatctatgttttcagttaggagaaa 26764721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 13546355 - 13546403
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
13546355 acatcacttcagaagtagaactctatctgcttctgatcattgttttcag 13546403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 30742248 - 30742200
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||    
30742248 acatcacttcagaagtagaactatatctgcttctgatcagtgttttcag 30742200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 85
Target Start/End: Original strand, 9399440 - 9399511
Alignment:
15 gacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaa 85  Q
    ||||||||||||||| ||||| |||||||||||||||| ||||||||||| |||||||||| |||| |||||    
9399440 gacatcacttcagaaatagaattctatctgcttctgattagtgttttcagcttaggagaaaatgaagaaaaa 9399511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 12353691 - 12353762
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaag 86  Q
    ||||||||||| |||||||||| ||||||||||||||||| |||||||| ||||||||||| ||| ||||||    
12353691 acatcacttcataagtagaactttatctgcttctgatcagagttttcagcttaggagaaatcgaagaaaaag 12353762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 13736934 - 13736993
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||    
13736934 acatcacttcagaagtggaactctatctgtttctgatcagtgttttcagtttaggagaaa 13736993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 21076011 - 21076070
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||    
21076011 acatcacttcagaagtagaactcaatctgcttctgatcagtgttatcagcttaggagaaa 21076070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 31117184 - 31117125
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||    
31117184 acatcacttcagaagtagaactctatctggttttgatcagtgttttcagcttaggagaaa 31117125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 28138907 - 28138849
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||| ||||||||||||||||||||||| |||||||| || |||||||||||||||||    
28138907 acatctcttcagaagtagaactctatctgtttctgatctgtattttcagttaggagaaa 28138849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 30116702 - 30116760
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||| ||||||||| |||||||||||||||||||||| || |||||||||||||||||    
30116702 acatctcttcagaagcagaactctatctgcttctgatctgtattttcagttaggagaaa 30116760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 3246291 - 3246363
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaattgaataaaaagaaa 89  Q
    ||||| |||||||||||||||||||||||||||||||| ||  ||||||||||||||||  ||| |||||||||    
3246291 acatctcttcagaagtagaactctatctgcttctgatctgt-atttcagttaggagaaaaagaagaaaaagaaa 3246363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 9088273 - 9088221
Alignment:
22 cttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| |||||    
9088273 cttcagaagtagaactctatctgcttctgatctgtattttcagttagaagaaa 9088221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 15516270 - 15516218
Alignment:
22 cttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    |||||||||||||||||||||||||||||||  |||| |||||||||||||||    
15516270 cttcagaagtagaactctatctgcttctgatatgtgtcttcagttaggagaaa 15516218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 31487517 - 31487458
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||| || ||||||||||| |||||||||||||||||||||| ||||||||||    
31487517 acatcacttcaaaattagaactctatttgcttctgatcagtgttttcagcttaggagaaa 31487458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 42242916 - 42242857
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||| |||||||| ||||| |||||||||||||||||||||| ||||||||||    
42242916 acatcacttcataagtagaaatctatttgcttctgatcagtgttttcagcttaggagaaa 42242857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 37395476 - 37395418
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaa 73  Q
    |||||||||||||| ||||| ||||||||||||| |||||||||||||| |||||||||    
37395476 acatcacttcagaaatagaattctatctgcttctaatcagtgttttcagcttaggagaa 37395418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 33932576 - 33932528
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    |||||| ||||||||||||| ||||| ||||||||||||||||||||||    
33932576 acatcatttcagaagtagaaatctatttgcttctgatcagtgttttcag 33932528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 6513255 - 6513306
Alignment:
13 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    |||| ||||||||||||| |||||||||| ||||| ||||||||||||||||    
6513255 tggaaatcacttcagaagcagaactctatttgcttatgatcagtgttttcag 6513306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 10848073 - 10848022
Alignment:
23 ttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||||||||||||||||||||||||||| | |  |||||||||||||||||    
10848073 ttcagaagtagaactctatctgcttctgaactgcattttcagttaggagaaa 10848022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 13358439 - 13358482
Alignment:
173 tcataccccaatttttgacctaagaacctacattcatacaccct 216  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
13358439 tcatatcccaatttttgacctaagaccctacattcatacaccct 13358482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 22000855 - 22000914
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||||| |||||||| | |||||||| |||||||||||||||||||||| ||||||||||    
22000855 acatcatttcagaagcataactctatttgcttctgatcagtgttttcagcttaggagaaa 22000914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 214
Target Start/End: Original strand, 30249351 - 30249389
Alignment:
176 taccccaatttttgacctaagaacctacattcatacacc 214  Q
    ||||||||||||||||||| |||||||||||||||||||    
30249351 taccccaatttttgacctaggaacctacattcatacacc 30249389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 90261 - 90306
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgtttt 61  Q
    |||||||||| |||| |||||||||| |||||||||||||||||||    
90261 acatcacttcggaagcagaactctatttgcttctgatcagtgtttt 90306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 21199846 - 21199898
Alignment:
21 acttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||||||||| |||||||||||||||||||||||||  ||||| |||||||||    
21199846 acttcagaagttgaactctatctgcttctgatcagtgacttcag-taggagaaa 21199898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 22704486 - 22704526
Alignment:
171 tgtcataccccaatttttgacctaagaacctacattcatac 211  Q
    |||||||| |||||||||||||||||| |||||||||||||    
22704486 tgtcatactccaatttttgacctaagaccctacattcatac 22704526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 23413804 - 23413863
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||| ||| |||||||||| | |||||| ||||||||||||| ||||||||||    
23413804 acatcacttcaaaagcagaactctatttacttctggtcagtgttttcagcttaggagaaa 23413863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 35932834 - 35932869
Alignment:
16 acatcacttcagaagtagaactctatctgcttctga 51  Q
    ||||| ||||||||||||||||||||||||||||||    
35932834 acatctcttcagaagtagaactctatctgcttctga 35932869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 25097871 - 25097928
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    |||||||||||||||  ||| ||||||||||||||||||||  |||||| |||||||||    
25097871 acatcacttcagaagctgaaatctatctgcttctgatcagttatttcag-taggagaaa 25097928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 25156963 - 25157020
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    |||||||||||||||  ||| ||||||||||||||||||||  |||||| |||||||||    
25156963 acatcacttcagaagctgaaatctatctgcttctgatcagttatttcag-taggagaaa 25157020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 197
Target Start/End: Original strand, 15394824 - 15394853
Alignment:
168 gcctgtcataccccaatttttgacctaaga 197  Q
    ||||||||||||||||||||||||||||||    
15394824 gcctgtcataccccaatttttgacctaaga 15394853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 19546358 - 19546406
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    ||||||||||||||| | |||| ||| |||||||||||||||| |||||    
19546358 acatcacttcagaagcataactatatttgcttctgatcagtgtcttcag 19546406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 28465177 - 28465233
Alignment:
18 atcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    |||||||||||||||||||||||| |  || ||||| ||  ||||||||||||||||    
28465177 atcacttcagaagtagaactctatatttttttgatctgtactttcagttaggagaaa 28465233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 51
Target Start/End: Original strand, 35987059 - 35987087
Alignment:
23 ttcagaagtagaactctatctgcttctga 51  Q
    |||||||||||||||||||||||||||||    
35987059 ttcagaagtagaactctatctgcttctga 35987087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 5e-21; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 17246917 - 17246858
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
17246917 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 17246858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 24628699 - 24628758
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
24628699 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 24628758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 29120675 - 29120616
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
29120675 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 29120616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 6516791 - 6516721
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaattgaataaaaag 86  Q
    ||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||  ||||||||||    
6516791 acatctcttcagaagtagaactctatctgcttctgatctgtattttcagttaggagaaaaagaataaaaag 6516721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 54679168 - 54679094
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaagaaa 89  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  ||| |||||||||    
54679168 acatcacttcagaagtagaactctatctgcttttgatcagtgttttcagcttaggagaaaaagaagaaaaagaaa 54679094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 55379619 - 55379555
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaa 79  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||    
55379619 acatcacttcagaagtagaactttatctgcttctgatcagtgttttcagcttaggagaaaatgaa 55379555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 14905127 - 14905186
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
14905127 acatcacttcagaagtagaactctatctgcttctgatcaatgttttcagcttaggagaaa 14905186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 22676362 - 22676421
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
22676362 acatcacttcaaaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 22676421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 23749833 - 23749774
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
23749833 acatcacttcagaagtagaactctatctacttctgatcagtgttttcagcttaggagaaa 23749774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 56033835 - 56033776
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
56033835 acatcacttcagaagtagaactctatctgcttctgataagtgttttcagcttaggagaaa 56033776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 8657547 - 8657593
Alignment:
170 ctgtcataccccaatttttgacctaagaacctacattcatacaccct 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
8657547 ctgtcataccccaatttttgacctaagaacctacattcatacaccct 8657593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 13576950 - 13577020
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtg-ttttcag-ttaggagaaattgaataaaa 84  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||  ||||||||    
13576950 acatcacttcagaagtagaactctatctgcttctgatcagtgtttttcagcttaggagaaaaagaataaaa 13577020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 44397516 - 44397468
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
44397516 acatcacttcagaagcagaactctatctgcttctgatcagtgttttcag 44397468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 3792640 - 3792581
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||    
3792640 acatcacttcagaagtagaactctatctgcttctaagcagtgttttcagcttaggagaaa 3792581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 37436332 - 37436379
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 63  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
37436332 acatcacttcataagtagaactctatctgcttctgatcagtgttttca 37436379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 12600060 - 12600003
Alignment:
18 atcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||    
12600060 atcacttcagaagtagaactttatttgcttctgatcagtgttttcagcttaggagaaa 12600003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 14605707 - 14605779
Alignment:
16 acatcacttcagaa-gtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaag 86  Q
    |||||||||||||| |||||| | |||||||||||||||||||||||||| ||||||||||  ||||||||||    
14605707 acatcacttcagaaagtagaattatatctgcttctgatcagtgttttcagcttaggagaaaacgaataaaaag 14605779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 3106218 - 3106276
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||| |||||||||||||||||||||||||||||| | |  |||||||||||||||||    
3106218 acatctcttcagaagtagaactctatctgcttctgaactgcattttcagttaggagaaa 3106276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 16852779 - 16852721
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    |||| ||||||||||||||||| |||||||||||||||||| ||||||  |||||||||    
16852779 acattacttcagaagtagaactttatctgcttctgatcagtattttcaaataggagaaa 16852721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 16939285 - 16939227
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||| |||||| |||| |||||||||||||||||||| || |||||||||||||||||    
16939285 acatctcttcaggagtataactctatctgcttctgatctgtattttcagttaggagaaa 16939227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 10071811 - 10071763
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    |||||||||||||||| ||||||||| ||||||| ||||||||||||||    
10071811 acatcacttcagaagtggaactctatttgcttcttatcagtgttttcag 10071763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 15135026 - 15134979
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 63  Q
    ||||||||| |||||| ||||||||| |||||||||||||||||||||    
15135026 acatcactttagaagtggaactctatttgcttctgatcagtgttttca 15134979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 29681315 - 29681378
Alignment:
12 atggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||| ||||||||||||| || ||||||| ||||| |||||||||||||||| ||||||||||    
29681315 atggaaatcacttcagaagcagtactctatttgcttatgatcagtgttttcagcttaggagaaa 29681378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 17399482 - 17399540
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||| ||||||||||||||||||||||||||||||   |  |||||||||||||||||    
17399482 acatctcttcagaagtagaactctatctgcttctgaattgcattttcagttaggagaaa 17399540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 19611171 - 19611233
Alignment:
13 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||| ||||||||||||| |||||||||| ||||||||||| |||||| ||| ||||||||||    
19611171 tggaaatcacttcagaagcagaactctatgtgcttctgatctgtgtttacagtttaggagaaa 19611233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 19665676 - 19665615
Alignment:
13 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||| ||||||||||||| |||||||||| |||||||||||||| ||||||| ||||||||||    
19665676 tggaaatcacttcagaagaagaactctatttgcttctgatcagt-ttttcagcttaggagaaa 19665615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 22089589 - 22089548
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtg 57  Q
    |||||||||||||||  |||||||||||||||||||||||||    
22089589 acatcacttcagaagctgaactctatctgcttctgatcagtg 22089548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 10072197 - 10072150
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 63  Q
    ||||||||||||||||  |||||||  |||||||||||||||||||||    
10072197 acatcacttcagaagtgaaactctagttgcttctgatcagtgttttca 10072150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 19884000 - 19883941
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||| |||||| ||| |||||||||||||||| |||||||| || ||||||||||    
19884000 acatcacttaagaagtggaattctatctgcttctgattagtgtttttagcttaggagaaa 19883941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 23120848 - 23120773
Alignment:
13 tggacatcacttcagaagtagaactctatctgcttctgatcagt-gttttcag-ttaggagaaattgaataaaaag 86  Q
    |||| ||||||||||||| |||||||||| |||||||||| |||  ||||||| |||||||||| |||| ||||||    
23120848 tggaaatcacttcagaagcagaactctatttgcttctgattagtctttttcagcttaggagaaaatgaagaaaaag 23120773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 6640997 - 6640959
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatca 54  Q
    |||||||||||||||  ||||||||||||||||||||||    
6640997 acatcacttcagaagctgaactctatctgcttctgatca 6640959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 37986420 - 37986474
Alignment:
21 acttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||||||||  |||||||||| ||||| |||||||||||||||| ||||||||||    
37986420 acttcagaataagaactctatttgcttatgatcagtgttttcagtttaggagaaa 37986474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 8686244 - 8686285
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtg 57  Q
    ||||||||||| ||| ||||||| ||||||||||||||||||    
8686244 acatcacttcaaaagcagaactcaatctgcttctgatcagtg 8686285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 11900413 - 11900364
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagt 65  Q
    ||||||||||||||   ||||||||||||||||||| ||||| |||||||    
11900413 acatcacttcagaatctgaactctatctgcttctgaacagtgatttcagt 11900364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 41115618 - 41115655
Alignment:
18 atcacttcagaagtagaactctatctgcttctgatcag 55  Q
    |||||||||||||  |||||||||||||||||||||||    
41115618 atcacttcagaagctgaactctatctgcttctgatcag 41115655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 51
Target Start/End: Original strand, 9752351 - 9752379
Alignment:
23 ttcagaagtagaactctatctgcttctga 51  Q
    |||||||||||||||||||||||||||||    
9752351 ttcagaagtagaactctatctgcttctga 9752379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 162
Target Start/End: Original strand, 20055880 - 20055932
Alignment:
110 cttccttggtgaaataagcttcgatgcggctgtaccatgctcgtggtgcttgt 162  Q
    |||||||||||||||| || | ||||| |||| || |||||||||||||||||    
20055880 cttccttggtgaaataggcctagatgcagctgaacaatgctcgtggtgcttgt 20055932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 51
Target Start/End: Complemental strand, 38513215 - 38513187
Alignment:
23 ttcagaagtagaactctatctgcttctga 51  Q
    |||||||||||||||||||||||||||||    
38513215 ttcagaagtagaactctatctgcttctga 38513187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 55731137 - 55731089
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    |||||||||||||||||||| ||||||| ||| | |||||| |||||||    
55731137 acatcacttcagaagtagaaatctatctactttttatcagtattttcag 55731089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 2280 - 2206
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaagaaa 89  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||  ||| |||||||||    
2280 acatcacttcagaagtagaactctatctgcttctgatcagtgtattcagcttaggagaaaaagaagaaaaagaaa 2206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 24576 - 24634
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
24576 acatcacttcagaagtagagctctatctgcttctgattagtgttttcagttaggagaaa 24634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 3483 - 3556
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaattgaataaaaagaaa 89  Q
    ||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||  ||| |||||||||    
3483 acatctcttcagaagtagaactctatctgcttctgatctgtattttcagttaggagaaaaagaagaaaaagaaa 3556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 49; Significance: 3e-19; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 79159 - 79215
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggaga 72  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
79159 acatcacttcagaagtagaactctatctgcttctaatcagtgttttcagttaagaga 79215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 33273 - 33230
Alignment:
173 tcataccccaatttttgacctaagaacctacattcatacaccct 216  Q
    ||||||||||| || |||||||||||||||||||||||||||||    
33273 tcataccccaacttatgacctaagaacctacattcatacaccct 33230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 9277 - 9218
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
9277 acatcacttcagaagtagaattctatctgcttctgatcagtgttttcagcttaggagaaa 9218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 932 - 873
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
932 acatcacttcagaagtagaattctatctgcttctgatcagtgttttcagcttaggagaaa 873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 752 - 823
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaag 86  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||| ||| ||||||    
752 acatcacttcagaagtagaattccatctgcttctgatcagtgttttcagcttaggagaaatagaagaaaaag 823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 25739 - 25680
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
25739 acatcacttcagaagtagaactctatttgcttctgatcagtgttttcagcttaggagaaa 25680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 102866 - 102807
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
102866 acatcacttcagaagtagaactctatctgcttatgatcagtgttttcagcttaggagaaa 102807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 110392 - 110450
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||    
110392 acatctcttcagaagtagaactctatctgcttctgatctgtattttcagttaggagaaa 110450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 20267 - 20324
Alignment:
18 atcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||| |||||||||| | |||||||||||| |||| || ||||||||||    
20267 atcacttcagaagcagaactctatttacttctgatcagtttttttagcttaggagaaa 20324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 47; Significance: 5e-18; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 210715 - 210657
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||    
210715 acatctcttcagaagtagaactctatctgcttctgatctgtattttcagttaggagaaa 210657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 378348 - 378410
Alignment:
13 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||| ||||||||||||| |||||||||| |||||||||| ||||||||||| ||||||||||    
378348 tggaaatcacttcagaagcagaactctatttgcttctgattagtgttttcagattaggagaaa 378410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 219547 - 219491
Alignment:
18 atcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||    
219547 atcacttcagaagtggaactctatctg-ttctgatcagtgttttcagcttaggagaaa 219491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 111400 - 111448
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||    
111400 acatcacttcaaaagtagaactctatctgcttctgatcagtgttttcag 111448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 6 - 65
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||    
6 acatcacttcagaagtagaactcgatctgcttctgatcagtgtttttagattaggagaaa 65  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 7976 - 7921
Alignment:
20 cacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
7976 cacttcagaagtggaactctatctgcttctgatcagtgttttcagcttaggagaaa 7921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 17642 - 17583
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||    
17642 acatcacttcagaagtagaaatctatttgcttctgatcagtgttttcagcttaggagaaa 17583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 44; Significance: 3e-16; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 59902 - 59949
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 63  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||    
59902 acatcacttcagaagtagaactctatctacttctgatcagtgttttca 59949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 45975 - 45921
Alignment:
20 cacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    |||||| ||||||||||| ||||||||||||| |||| ||||||| |||||||||    
45975 cacttctgaagtagaactttatctgcttctgaacagtattttcagataggagaaa 45921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 63646 - 63592
Alignment:
20 cacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    |||||| ||||||||||| ||||| ||||||| |||||||||||  |||||||||    
63646 cacttctgaagtagaactttatctacttctgaacagtgttttcaaataggagaaa 63592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 6524 - 6598
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaagaaa 89  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||| | ||||||||||  ||| |||||||||    
6524 acatcacttcagaagtagaactctatctgcttttgataagtgttttcggcttaggagaaaaagaagaaaaagaaa 6598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 23937 - 23879
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||| |||||||||||||| ||||||||||||||||| || |||||||||||||||||    
23937 acatctcttcagaagtagaattctatctgcttctgatctgtattttcagttaggagaaa 23879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 22956 - 23014
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||| |||||||||||||||||||||||||| ||||| || |||||||||||||||||    
22956 acatctcttcagaagtagaactctatctgcttttgatctgtattttcagttaggagaaa 23014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 729 - 804
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtg-ttttcag-ttaggagaaattgaataaaaagaaa 89  Q
    |||||| ||||||||| ||||  ||||||||||||||||||| ||||||| ||||||||||  ||| |||||||||    
729 acatcagttcagaagtggaacattatctgcttctgatcagtgtttttcagcttaggagaaaaagaagaaaaagaaa 804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1699 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold1699
Description:

Target: scaffold1699; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 1430 - 1385
Alignment:
171 tgtcataccccaatttttgacctaagaacctacattcatacaccct 216  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
1430 tgtcataccccaattttttacctaagaacctacattcatacaccct 1385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 40236 - 40191
Alignment:
171 tgtcataccccaatttttgacctaagaacctacattcatacaccct 216  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
40236 tgtcatactccaatttttgacctaagaacctacattcatacaccct 40191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 19454 - 19502
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||    
19454 acatcacgtcagaagtagaactctatctgcttctgattagtgttttcag 19502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 7588 - 7548
Alignment:
171 tgtcataccccaatttttgacctaagaacctacattcatac 211  Q
    ||||||||||||||||||||||||| | |||||||||||||    
7588 tgtcataccccaatttttgacctaaaatcctacattcatac 7548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 10907 - 10967
Alignment:
16 acatcacttcagaagtagaactctatctgc-ttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||    
10907 acatcacttcagaagtagaactctatctgctttctgatcagtattttcagcttaggagaaa 10967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 15571 - 15631
Alignment:
16 acatcacttcagaagtagaactctatctgc-ttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||    
15571 acatcacttcagaagtagaactctatctgctttctgatcagtattttcagcttaggagaaa 15631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 211671 - 211599
Alignment:
16 acatcacttcagaa-gtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaag 86  Q
    |||||||||||||| |||||| | |||||||||||||||||||||||||| ||||||||||  ||||||||||    
211671 acatcacttcagaaagtagaattatatctgcttctgatcagtgttttcagcttaggagaaaacgaataaaaag 211599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 7142 - 7096
Alignment:
15 gacatcacttcagaagtagaactctatctgcttctgatcagtgtttt 61  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||    
7142 gacatcacttcagaagtggaacactatctgcttctgatcagtgtttt 7096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 13303 - 13246
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    |||||||||||||||| |||||||||||||||||||||||||  ||||| |||||||||    
13303 acatcacttcagaagttgaactctatctgcttctgatcagtgacttcag-taggagaaa 13246  T

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Target: scaffold1294 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1294
Description:

Target: scaffold1294; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 2080 - 2039
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtg 57  Q
    |||||||||||||||| |||||||||||||||||||||||||    
2080 acatcacttcagaagtggaactctatctgcttctgatcagtg 2039  T

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Target: scaffold0530 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 2816 - 2873
Alignment:
18 atcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||| |||||||||| |||||||||| ||||||||||| ||||||||||    
2816 atcacttcagaagcagaactctatttgcttctgataagtgttttcagcttaggagaaa 2873  T

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Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 66206 - 66263
Alignment:
17 catcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    |||| ||| |||||||||||||||||||||||||||| |  |||||||||||||||||    
66206 catctctttagaagtagaactctatctgcttctgatctgcattttcagttaggagaaa 66263  T

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Target: scaffold0011; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 145249 - 145306
Alignment:
17 catcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    |||| ||||||||||||||||||||||||||||||||    ||||||||||| |||||    
145249 catctcttcagaagtagaactctatctgcttctgatctacattttcagttagaagaaa 145306  T

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Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 83672 - 83627
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgtttt 61  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||    
83672 acataacttcagaagtggaactctatctgcttctgatcagtgtttt 83627  T

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Target: scaffold0567 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 9209 - 9150
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||| || | ||||| |||||||||||||||||||||| ||||||||||    
9209 acatcacttcagaagcagtattctatttgcttctgatcagtgttttcagcttaggagaaa 9150  T

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Target: scaffold0607 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 5443 - 5389
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttagga 70  Q
    ||||| ||||| ||||||||||||||||||||||||||  | |||||||||||||    
5443 acatctcttcaaaagtagaactctatctgcttctgatctatattttcagttagga 5389  T

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Target: scaffold0249 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 18559 - 18617
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||| |||||||||||||||||||||| ||||||| | |  |||||||||||||||||    
18559 acatctcttcagaagtagaactctatctacttctgaactgcattttcagttaggagaaa 18617  T

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Target: scaffold0247 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 16514 - 16571
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||| |||||||||||||| | ||||||||||||||| || |||||||||||||||||    
16514 acatctcttcagaagtagaattttatctgcttctgatctgt-ttttcagttaggagaaa 16571  T

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Target: scaffold0026 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 7193 - 7131
Alignment:
13 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||| ||||||| ||||| | |||||||| |||||||||||||||||||||| ||||||||||    
7193 tggaaatcacttaagaagcataactctatttgcttctgatcagtgttttcagcttaggagaaa 7131  T

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Target: scaffold0301 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 8949 - 8994
Alignment:
171 tgtcataccccaatttttgacctaagaacctacattcatacaccct 216  Q
    ||||||| || |||||||||| ||||||||||||||||||||||||    
8949 tgtcatatcctaatttttgacttaagaacctacattcatacaccct 8994  T

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Target: scaffold0025 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 73835 - 73783
Alignment:
21 acttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||||||||| ||||||||||||||| ||||||||| |||||| |||||||||    
73835 acttcagaagttgaactctatctgcttttgatcagtgatttcag-taggagaaa 73783  T

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Target: scaffold0420 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 10899 - 10939
Alignment:
171 tgtcataccccaatttttgacctaagaacctacattcatac 211  Q
    ||||||||||||||||||||||||||| ||| |||||||||    
10899 tgtcataccccaatttttgacctaagaccctgcattcatac 10939  T

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Target: scaffold0343 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 4707 - 4667
Alignment:
171 tgtcataccccaatttttgacctaagaacctacattcatac 211  Q
    ||||||||||||||||||||||||| | |||||||||||||    
4707 tgtcataccccaatttttgacctaacatcctacattcatac 4667  T

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Target: scaffold0343; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 4915 - 4875
Alignment:
171 tgtcataccccaatttttgacctaagaacctacattcatac 211  Q
    ||||||||||||||||||||||||| | |||||||||||||    
4915 tgtcataccccaatttttgacctaacatcctacattcatac 4875  T

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Target: scaffold0031 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 33771 - 33731
Alignment:
171 tgtcataccccaatttttgacctaagaacctacattcatac 211  Q
    ||||||||||||||||||||||||| | |||||||||||||    
33771 tgtcataccccaatttttgacctaacatcctacattcatac 33731  T

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Target: scaffold0022 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 158457 - 158409
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 64  Q
    |||||||||||||||| ||||||||||||||||| || |||| ||||||    
158457 acatcacttcagaagtggaactctatctgcttctaataagtgatttcag 158409  T

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Target: scaffold0352 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 1617 - 1652
Alignment:
16 acatcacttcagaagtagaactctatctgcttctga 51  Q
    ||||| ||||||||||||||||||||||||||||||    
1617 acatctcttcagaagtagaactctatctgcttctga 1652  T

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Target: scaffold0334 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 7206 - 7163
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgtt 59  Q
    ||||||||||| |||||||||||||| |||||||||| ||||||    
7206 acatcacttcaaaagtagaactctatttgcttctgataagtgtt 7163  T

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Target: scaffold0330 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 491 - 530
Alignment:
36 ctctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||||||||||||||||||||| ||||||||||    
491 ctctatctgcttctgatcagtgttttcagcttaggagaaa 530  T

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Target: scaffold0146 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 14425 - 14366
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    ||||||||||| ||| |||||||||| ||||| |||||| ||||||||| ||||||||||    
14425 acatcacttcaaaagcagaactctatttgcttttgatcattgttttcagcttaggagaaa 14366  T

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Target: scaffold0056 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 35543 - 35578
Alignment:
16 acatcacttcagaagtagaactctatctgcttctga 51  Q
    ||||| ||||||||||||||||||||||||||||||    
35543 acatctcttcagaagtagaactctatctgcttctga 35578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 88398 - 88433
Alignment:
16 acatcacttcagaagtagaactctatctgcttctga 51  Q
    ||||| ||||||||||||||||||||||||||||||    
88398 acatctcttcagaagtagaactctatctgcttctga 88433  T

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Target: scaffold0598 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 2586 - 2643
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    |||||||||||||||  ||||||||||||||||||| |||||  ||||| |||||||||    
2586 acatcacttcagaagctgaactctatctgcttctgaacagtgacttcag-taggagaaa 2643  T

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Target: scaffold0138 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 16292 - 16238
Alignment:
21 acttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaa 74  Q
    |||| |||||| ||||||||||||||||||||||||  |||||| ||||||||||    
16292 actttagaagtggaactctatctgcttctgatcagtaatttcagcttaggagaaa 16238  T

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Target: scaffold0084 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 48630 - 48556
Alignment:
13 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaag 86  Q
    |||| ||||||||| ||| | ||||||||  ||||||||||||||||| ||| |||||||||| |||| ||||||    
48630 tggaaatcacttcaaaagcaaaactctattcgcttctgatcagtgtttccagcttaggagaaaatgaagaaaaag 48556  T

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Target: scaffold0064 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 44665 - 44722
Alignment:
16 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaa 74  Q
    ||||||||| || ||| ||||||||||||||| ||||||||| |||||| |||||||||    
44665 acatcactttagcagtggaactctatctgcttttgatcagtgatttcag-taggagaaa 44722  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 362920 - 362882
Alignment:
171 tgtcataccccaatttttgacctaagaacctacattcat 209  Q
    ||||||||||||||||||||||||||  |||||||||||    
362920 tgtcataccccaatttttgacctaaggtcctacattcat 362882  T

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Target: scaffold0337 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 14281 - 14208
Alignment:
13 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaa 85  Q
    |||| |||||||||||||  ||||||||| |||||||||||||| |||| || |||||||| |  |||||||||    
14281 tggaaatcacttcagaagccgaactctatttgcttctgatcagtatttttagcttaggagagaacgaataaaaa 14208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 1323 - 1250
Alignment:
13 tggacatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaattgaataaaaa 85  Q
    |||| |||||||||||||  ||||||||| |||||||||||||| |||| || |||||||| |  |||||||||    
1323 tggaaatcacttcagaagccgaactctatttgcttctgatcagtatttttagcttaggagagaacgaataaaaa 1250  T

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Target: scaffold0323 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 17784 - 17744
Alignment:
171 tgtcataccccaatttttgacctaagaacctacattcatac 211  Q
    ||||||||||||||||||||||||||  |||||| ||||||    
17784 tgtcataccccaatttttgacctaaggtcctacaatcatac 17744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 197
Target Start/End: Original strand, 24299 - 24327
Alignment:
169 cctgtcataccccaatttttgacctaaga 197  Q
    |||||||||||||||||||||||||||||    
24299 cctgtcataccccaatttttgacctaaga 24327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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