View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7311_low_78 (Length: 215)
Name: NF7311_low_78
Description: NF7311
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7311_low_78 |
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Alignment Details
Target: chr5 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 21 - 198
Target Start/End: Original strand, 40557237 - 40557414
Alignment:
| Q |
21 |
tcaagaagtggaaaatggtgactggagaggtctacattatcacaaacaaatggaacgaacttgtagcagaaaaccgtttcaaagccaagaaaaaggtgca |
120 |
Q |
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| T |
40557237 |
tcaagaagtggaaaatggtgactggagaggtctacattatcacaaacaaatggaacgaacttgtagcagaaaaccgtttcaaagccaagaaaaaggtgca |
40557336 |
T |
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| Q |
121 |
actctggtcttttagatgccgtggtgaactctacttcgcactcgtcaagctctagccaagttctattagtcaatgatg |
198 |
Q |
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| T |
40557337 |
actttggtcttttagatgccgtggtgaactctacttcgcactcgtcaagctctagccaagttctatcagtcaatgatg |
40557414 |
T |
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