View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7313_low_6 (Length: 488)

Name: NF7313_low_6
Description: NF7313
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7313_low_6
NF7313_low_6
[»] chr6 (36 HSPs)
chr6 (1-474)||(4308394-4308865)
chr6 (148-234)||(26559160-26559247)
chr6 (273-327)||(24626270-24626324)
chr6 (278-335)||(4006681-4006738)
chr6 (158-364)||(33080509-33080714)
chr6 (153-271)||(7945811-7945930)
chr6 (279-390)||(4248870-4248981)
chr6 (40-123)||(4308847-4308930)
chr6 (159-226)||(27857429-27857496)
chr6 (312-379)||(29269819-29269886)
chr6 (272-422)||(3155056-3155206)
chr6 (280-334)||(31776323-31776377)
chr6 (146-215)||(13908322-13908391)
chr6 (157-226)||(17241090-17241159)
chr6 (153-226)||(32171625-32171698)
chr6 (159-344)||(33887788-33887968)
chr6 (145-337)||(281766-281953)
chr6 (145-213)||(7351589-7351657)
chr6 (41-84)||(13908349-13908392)
chr6 (312-379)||(29274309-29274376)
chr6 (312-395)||(31672548-31672631)
chr6 (283-337)||(2735034-2735088)
chr6 (196-225)||(836506-836535)
chr6 (149-226)||(2455881-2455958)
chr6 (145-226)||(2460069-2460150)
chr6 (153-202)||(3738196-3738245)
chr6 (280-337)||(8147667-8147724)
chr6 (196-225)||(10645353-10645382)
chr6 (145-226)||(30863317-30863398)
chr6 (42-79)||(33027706-33027743)
chr6 (145-226)||(33737641-33737722)
chr6 (272-300)||(103433-103461)
chr6 (272-380)||(2727896-2728004)
chr6 (272-328)||(6909912-6909968)
chr6 (349-393)||(7351725-7351769)
chr6 (272-328)||(33067133-33067188)
[»] chr7 (37 HSPs)
chr7 (145-234)||(30535625-30535715)
chr7 (276-395)||(39169459-39169578)
chr7 (279-364)||(12110298-12110383)
chr7 (148-219)||(3836604-3836675)
chr7 (312-383)||(35536026-35536097)
chr7 (278-369)||(46945842-46945933)
chr7 (153-421)||(425749-426011)
chr7 (145-226)||(4970710-4970790)
chr7 (145-222)||(30748952-30749029)
chr7 (146-226)||(22387815-22387895)
chr7 (146-226)||(23214926-23215006)
chr7 (152-270)||(25670511-25670631)
chr7 (272-328)||(44821933-44821989)
chr7 (153-216)||(529443-529506)
chr7 (272-363)||(1417203-1417294)
chr7 (285-384)||(30496622-30496721)
chr7 (147-189)||(7513667-7513709)
chr7 (42-80)||(19302482-19302520)
chr7 (152-226)||(22759232-22759306)
chr7 (272-302)||(24363641-24363671)
chr7 (148-226)||(28844561-28844639)
chr7 (42-80)||(30748953-30748991)
chr7 (319-421)||(31341075-31341177)
chr7 (373-419)||(42656397-42656443)
chr7 (145-223)||(43854959-43855037)
chr7 (160-213)||(5288195-5288248)
chr7 (282-379)||(9527140-9527237)
chr7 (42-79)||(34036031-34036068)
chr7 (278-339)||(45530484-45530545)
chr7 (145-221)||(45593605-45593681)
chr7 (280-337)||(48470009-48470066)
chr7 (146-214)||(1418502-1418570)
chr7 (173-221)||(1431939-1431987)
chr7 (145-221)||(3610658-3610734)
chr7 (153-189)||(25907406-25907442)
chr7 (271-303)||(28076556-28076588)
chr7 (272-340)||(47941285-47941353)
[»] chr8 (45 HSPs)
chr8 (146-226)||(2487927-2488007)
chr8 (272-366)||(34770828-34770922)
chr8 (157-336)||(42215230-42215410)
chr8 (172-221)||(42215035-42215084)
chr8 (272-340)||(6509343-6509411)
chr8 (311-394)||(14482110-14482193)
chr8 (158-259)||(30191072-30191175)
chr8 (145-363)||(7646145-7646358)
chr8 (174-224)||(7853452-7853502)
chr8 (282-362)||(926427-926508)
chr8 (145-194)||(7008701-7008750)
chr8 (145-226)||(16162831-16162912)
chr8 (101-151)||(2606143-2606193)
chr8 (153-223)||(6950396-6950466)
chr8 (146-208)||(14926901-14926963)
chr8 (279-421)||(41336692-41336834)
chr8 (145-219)||(44236741-44236815)
chr8 (145-226)||(6526170-6526251)
chr8 (145-226)||(7918700-7918780)
chr8 (145-226)||(38537662-38537743)
chr8 (156-216)||(1664450-1664510)
chr8 (288-344)||(3269652-3269708)
chr8 (174-214)||(3953885-3953925)
chr8 (161-221)||(24326107-24326167)
chr8 (154-226)||(34770939-34771011)
chr8 (174-225)||(34849176-34849227)
chr8 (145-223)||(778463-778541)
chr8 (146-208)||(2606138-2606200)
chr8 (196-226)||(32840954-32840984)
chr8 (279-365)||(37353296-37353381)
chr8 (148-226)||(39551130-39551208)
chr8 (276-337)||(2093244-2093305)
chr8 (287-340)||(2482827-2482880)
chr8 (270-303)||(24558852-24558885)
chr8 (280-337)||(38561691-38561748)
chr8 (153-226)||(43504822-43504895)
chr8 (156-216)||(1889064-1889124)
chr8 (180-224)||(2482936-2482980)
chr8 (274-302)||(5383151-5383179)
chr8 (153-221)||(10939451-10939519)
chr8 (280-356)||(29205754-29205830)
chr8 (42-98)||(29417530-29417586)
chr8 (174-226)||(31875542-31875594)
chr8 (145-213)||(36963272-36963339)
chr8 (272-392)||(38036152-38036272)
[»] chr2 (47 HSPs)
chr2 (278-362)||(4090289-4090373)
chr2 (145-226)||(43529776-43529857)
chr2 (174-226)||(787403-787455)
chr2 (313-421)||(41880584-41880692)
chr2 (277-344)||(41407033-41407100)
chr2 (272-337)||(11513863-11513928)
chr2 (146-222)||(22878173-22878249)
chr2 (146-233)||(5759494-5759581)
chr2 (194-369)||(41817101-41817271)
chr2 (145-234)||(8017496-8017586)
chr2 (148-226)||(28803451-28803529)
chr2 (94-152)||(30552562-30552620)
chr2 (145-226)||(1318307-1318387)
chr2 (177-226)||(1801739-1801788)
chr2 (153-226)||(3458666-3458739)
chr2 (272-337)||(12464513-12464578)
chr2 (145-206)||(15370241-15370302)
chr2 (145-226)||(28677577-28677658)
chr2 (272-333)||(35486403-35486464)
chr2 (181-226)||(39622022-39622067)
chr2 (282-339)||(40889471-40889528)
chr2 (272-337)||(41851500-41851565)
chr2 (281-337)||(43299451-43299508)
chr2 (145-189)||(1830147-1830191)
chr2 (272-303)||(39983341-39983372)
chr2 (149-226)||(5902473-5902548)
chr2 (272-302)||(9477952-9477982)
chr2 (272-366)||(10143108-10143202)
chr2 (147-213)||(16503437-16503503)
chr2 (42-84)||(18525160-18525202)
chr2 (180-226)||(31982370-31982416)
chr2 (179-365)||(33931522-33931703)
chr2 (148-326)||(40158694-40158867)
chr2 (93-151)||(43529776-43529834)
chr2 (276-421)||(626255-626400)
chr2 (145-222)||(2142730-2142806)
chr2 (145-226)||(15120254-15120335)
chr2 (181-226)||(32837394-32837439)
chr2 (276-337)||(43141836-43141897)
chr2 (146-219)||(43259913-43259986)
chr2 (148-221)||(43530032-43530105)
chr2 (272-328)||(1625874-1625930)
chr2 (157-225)||(5163316-5163384)
chr2 (146-226)||(23974412-23974491)
chr2 (278-365)||(39621890-39621975)
chr2 (309-357)||(40758968-40759016)
chr2 (93-137)||(44438759-44438803)
[»] chr1 (54 HSPs)
chr1 (158-224)||(31517671-31517737)
chr1 (148-226)||(18327067-18327145)
chr1 (176-226)||(36070252-36070302)
chr1 (145-226)||(2295168-2295248)
chr1 (272-357)||(7218114-7218199)
chr1 (145-226)||(37593602-37593683)
chr1 (191-270)||(19389926-19390008)
chr1 (153-219)||(10199334-10199400)
chr1 (156-226)||(11217943-11218013)
chr1 (148-226)||(51929383-51929461)
chr1 (177-226)||(10280720-10280769)
chr1 (272-337)||(24915091-24915156)
chr1 (272-333)||(25006074-25006135)
chr1 (272-337)||(25479546-25479611)
chr1 (146-223)||(46504137-46504214)
chr1 (146-221)||(172492-172570)
chr1 (146-222)||(10439761-10439837)
chr1 (276-380)||(10854655-10854759)
chr1 (146-182)||(11211233-11211269)
chr1 (145-213)||(12564417-12564485)
chr1 (272-328)||(17269224-17269280)
chr1 (272-316)||(18327180-18327224)
chr1 (279-327)||(27976570-27976618)
chr1 (146-226)||(28467504-28467584)
chr1 (174-226)||(43371838-43371890)
chr1 (159-226)||(14737658-14737725)
chr1 (272-303)||(25005837-25005868)
chr1 (272-364)||(35017512-35017606)
chr1 (179-226)||(42757129-42757176)
chr1 (191-226)||(50644218-50644253)
chr1 (270-337)||(51688670-51688737)
chr1 (148-226)||(4549462-4549540)
chr1 (196-226)||(5741678-5741708)
chr1 (272-326)||(7472287-7472341)
chr1 (319-393)||(18434565-18434639)
chr1 (145-219)||(25719749-25719823)
chr1 (145-203)||(29793851-29793909)
chr1 (354-396)||(47885130-47885172)
chr1 (276-361)||(3924565-3924650)
chr1 (153-226)||(4200305-4200378)
chr1 (145-226)||(23373231-23373312)
chr1 (272-321)||(23445315-23445364)
chr1 (280-337)||(27738228-27738285)
chr1 (280-365)||(31623960-31624045)
chr1 (160-221)||(32515374-32515435)
chr1 (272-365)||(33527187-33527280)
chr1 (276-337)||(34179916-34179977)
chr1 (272-301)||(47598461-47598490)
chr1 (153-202)||(47884959-47885008)
chr1 (154-226)||(4757409-4757481)
chr1 (147-223)||(6659754-6659830)
chr1 (148-216)||(7252541-7252609)
chr1 (44-84)||(29793619-29793659)
chr1 (281-337)||(49517035-49517091)
[»] chr5 (44 HSPs)
chr5 (272-363)||(18857440-18857531)
chr5 (145-256)||(41535022-41535134)
chr5 (272-367)||(17368611-17368706)
chr5 (148-226)||(32849249-32849327)
chr5 (148-224)||(4619780-4619856)
chr5 (279-395)||(32172560-32172676)
chr5 (146-259)||(499650-499765)
chr5 (153-208)||(1084065-1084120)
chr5 (272-337)||(10272471-10272536)
chr5 (145-226)||(12459919-12460000)
chr5 (145-222)||(25720335-25720412)
chr5 (148-213)||(40731565-40731630)
chr5 (41-85)||(28578953-28578997)
chr5 (279-335)||(34205206-34205262)
chr5 (153-327)||(2568632-2568802)
chr5 (162-221)||(6593375-6593434)
chr5 (146-221)||(11104981-11105056)
chr5 (145-208)||(12074364-12074427)
chr5 (280-331)||(17652232-17652283)
chr5 (147-226)||(26516478-26516557)
chr5 (313-384)||(35095864-35095935)
chr5 (319-394)||(37063161-37063236)
chr5 (147-226)||(38033947-38034026)
chr5 (156-215)||(38035988-38036047)
chr5 (280-378)||(4620117-4620215)
chr5 (152-226)||(12595375-12595449)
chr5 (280-366)||(16889671-16889757)
chr5 (272-302)||(18543236-18543266)
chr5 (282-380)||(31694440-31694538)
chr5 (273-337)||(443899-443964)
chr5 (145-226)||(11297114-11297195)
chr5 (272-337)||(14295471-14295536)
chr5 (272-337)||(38047895-38047960)
chr5 (158-215)||(40534281-40534338)
chr5 (145-226)||(41830923-41831004)
chr5 (312-376)||(1019524-1019588)
chr5 (115-163)||(6715839-6715887)
chr5 (170-226)||(10907449-10907505)
chr5 (312-395)||(11457030-11457111)
chr5 (158-226)||(13244482-13244550)
chr5 (155-219)||(14980587-14980651)
chr5 (312-376)||(36646166-36646230)
chr5 (95-151)||(38033947-38034003)
chr5 (272-300)||(40205114-40205142)
[»] chr3 (44 HSPs)
chr3 (145-226)||(11253572-11253653)
chr3 (272-337)||(30956666-30956731)
chr3 (272-337)||(30972478-30972543)
chr3 (155-221)||(46434541-46434607)
chr3 (148-226)||(49465586-49465664)
chr3 (272-337)||(1816548-1816613)
chr3 (145-218)||(35903085-35903158)
chr3 (146-215)||(36189711-36189780)
chr3 (145-226)||(44014716-44014797)
chr3 (145-226)||(47903998-47904079)
chr3 (272-339)||(24785168-24785235)
chr3 (148-226)||(45264287-45264364)
chr3 (146-216)||(45590732-45590802)
chr3 (36-81)||(8007579-8007624)
chr3 (153-226)||(24281118-24281191)
chr3 (280-337)||(37788825-37788882)
chr3 (145-226)||(45541642-45541723)
chr3 (154-226)||(3776317-3776389)
chr3 (272-328)||(21367641-21367697)
chr3 (158-226)||(37273205-37273273)
chr3 (157-225)||(41644375-41644443)
chr3 (145-221)||(43948730-43948806)
chr3 (146-226)||(50211806-50211886)
chr3 (274-337)||(14145877-14145940)
chr3 (272-315)||(22203417-22203460)
chr3 (148-219)||(41057233-41057304)
chr3 (42-85)||(48286729-48286772)
chr3 (282-337)||(48397611-48397666)
chr3 (153-220)||(50760668-50760735)
chr3 (145-227)||(21271030-21271112)
chr3 (274-336)||(21872313-21872375)
chr3 (42-80)||(30657399-30657437)
chr3 (282-335)||(3467438-3467491)
chr3 (280-337)||(23315591-23315648)
chr3 (109-150)||(27795947-27795988)
chr3 (145-222)||(30573833-30573909)
chr3 (94-151)||(36189723-36189780)
chr3 (159-204)||(43875743-43875788)
chr3 (146-226)||(3775770-3775850)
chr3 (271-303)||(22214698-22214730)
chr3 (145-189)||(30657394-30657438)
chr3 (320-364)||(34958266-34958310)
chr3 (145-225)||(42747700-42747779)
chr3 (312-380)||(44374724-44374792)
[»] scaffold0024 (1 HSPs)
scaffold0024 (279-395)||(27483-27599)
[»] chr4 (44 HSPs)
chr4 (186-365)||(1137649-1137823)
chr4 (272-394)||(3891485-3891605)
chr4 (272-366)||(2996509-2996603)
chr4 (145-226)||(7367972-7368053)
chr4 (153-226)||(18628479-18628552)
chr4 (146-226)||(6428089-6428169)
chr4 (146-226)||(37575855-37575935)
chr4 (174-221)||(22471350-22471397)
chr4 (145-259)||(22662169-22662281)
chr4 (46-80)||(50298628-50298662)
chr4 (153-214)||(1017111-1017172)
chr4 (145-226)||(47399556-47399637)
chr4 (146-215)||(52388296-52388365)
chr4 (151-219)||(3549479-3549547)
chr4 (280-344)||(6466094-6466158)
chr4 (186-326)||(20936188-20936323)
chr4 (145-221)||(28615411-28615486)
chr4 (145-221)||(42866144-42866220)
chr4 (285-340)||(2465972-2466027)
chr4 (278-365)||(18630617-18630704)
chr4 (145-259)||(22666648-22666760)
chr4 (145-187)||(679401-679443)
chr4 (146-208)||(2811560-2811622)
chr4 (272-326)||(7694050-7694104)
chr4 (148-214)||(19429391-19429457)
chr4 (312-414)||(22684596-22684698)
chr4 (279-337)||(25885824-25885882)
chr4 (148-226)||(31642264-31642342)
chr4 (174-220)||(39178213-39178259)
chr4 (148-222)||(50746050-50746124)
chr4 (279-337)||(52746887-52746945)
chr4 (272-337)||(10192249-10192314)
chr4 (271-340)||(13949883-13949952)
chr4 (280-337)||(17884033-17884090)
chr4 (148-221)||(22236026-22236099)
chr4 (145-226)||(27123270-27123351)
chr4 (272-380)||(50742876-50742982)
chr4 (145-226)||(51560207-51560288)
chr4 (312-395)||(485988-486072)
chr4 (158-226)||(2996644-2996712)
chr4 (146-226)||(6987660-6987740)
chr4 (44-80)||(20656152-20656188)
chr4 (182-226)||(25434441-25434485)
chr4 (272-328)||(35517173-35517229)
[»] scaffold0199 (1 HSPs)
scaffold0199 (156-216)||(6891-6951)
[»] scaffold0654 (1 HSPs)
scaffold0654 (312-384)||(6717-6789)
[»] scaffold0167 (1 HSPs)
scaffold0167 (272-304)||(17274-17306)
[»] scaffold0014 (1 HSPs)
scaffold0014 (312-384)||(116636-116708)


Alignment Details
Target: chr6 (Bit Score: 447; Significance: 0; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 447; E-Value: 0
Query Start/End: Original strand, 1 - 474
Target Start/End: Complemental strand, 4308865 - 4308394
Alignment:
Q  1 acttatttgagcttatctagtggcggaggcaccactgacattgtttgaattgatttattttagcttatctactgacataaacaccggtgatgctgtttaa 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4308865 acttatttgaacttatctagtggcggaggcaccactgacattgtttgaattgatttattttagcttatctactgacataaacaccggtgacgctgtttaa 4308766  T
Q  101 attgactgatttgagcttatctactggtataatcactagtgaaactgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4308765 attgactgatttgagcttatctactggtataatcactagtgaaactgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgt 4308666  T
Q  201 ttgggagaacttatgaaaacaacttagatatgtttaaaagttattttagcttatttccacaagcactccagtctccaggatagcttatgaaaacaactta 300  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4308665 ttgggagaacttatgaaaacaacttcgatatgtttaaaagttattttagcttatttccacaaacactccagtctccaggatagcttatgaaaacaactta 4308566  T
Q  301 tagactagacaaaaacaatttgactttaatttatcttgttttatggagatagtttattcataagcatttgtatgataagcgcttgtgctataagctactt 400  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4308565 tagactagac--aaacaatttgactttaatttatcttgttttatggagatagtttattcataagcatttgtatgataagcgcttgtgctataagctactt 4308468  T
Q  401 agtaagttgtttattcaaacatgccctagtttgtttggaatgcaattgttttcgattattttggatgttgatgt 474  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4308467 agtaagttgtttattcaaacatgccctagtttgtttggaatgcaattgttttcgattattttggatgttgatgt 4308394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 148 - 234
Target Start/End: Original strand, 26559160 - 26559247
Alignment:
Q  148 tttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta-gatatgtt 234  Q
    |||| ||| ||||||||||||| |  |||||||||||||| | |||| ||||||||| ||||||||||||||||||||| ||||||||    
T  26559160 tttggattaacttatttgagtttacctactggcataagcatttgtgagactgtttggaagaacttatgaaaacaacttatgatatgtt 26559247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 24626324 - 24626270
Alignment:
Q  273 ctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgacttt 327  Q
    ||||| |||||||||||||||||||||||||| || ||||||||||||| |||||    
T  24626324 ctccaagatagcttatgaaaacaacttatagaatatacaaaaacaatttaacttt 24626270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 278 - 335
Target Start/End: Complemental strand, 4006738 - 4006681
Alignment:
Q  278 ggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatc 335  Q
    ||||||||||||||||||||||||||  || | |||||||||||||||||| ||||||    
T  4006738 ggatagcttatgaaaacaacttatagcttatataaaaacaatttgactttattttatc 4006681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 364
Target Start/End: Original strand, 33080509 - 33080714
Alignment:
Q  158 cttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta-gatatgtttaaaagttatttt-agcttatt 255  Q
    |||||||||| | ||||||||||||||||||| |||| | |||||   |||| || ||||| ||||||| || ||||||| |||||||||| || |||||    
T  33080509 cttatttgagcttatttactggcataagcacttgtgagattgtttaatagaatttctgaaaccaacttatgacatgtttataagttattttcagtttatt 33080608  T
Q  256 tccacaagcactccagtctccaggatagcttatgaaaaca----acttatagactagacaaaaacaatttgactttaatttatcttgttttatggagata 351  Q
    || | ||||       |||||||||||| ||||| ||| |    | |||||||| | |||||||||||||||||| |||||||| ||| |||| || | |    
T  33080609 tctataagc-------tctccaggatagtttatgtaaatagcttatttatagaccatacaaaaacaatttgacttgaatttatcctgtgttatagaaaaa 33080701  T
Q  352 gtttattcataag 364  Q
    | |||||||||||    
T  33080702 gcttattcataag 33080714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 271
Target Start/End: Original strand, 7945811 - 7945930
Alignment:
Q  153 attgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta-gatatgtttaaaagttatttt-agc 250  Q
    ||||||||||| ||| | || ||||| |||||||||| ||||||  ||||||||||| |||||||||||||||| |  |||||||  |||| |||| |||    
T  7945811 attgacttatt-gagcttatctactgacataagcactcgtgacatggtttgggagaaattatgaaaacaacttatggcatgtttattagttgttttaagc 7945909  T
Q  251 ttatttccacaagcactccag 271  Q
    ||||||||| |||| ||||||    
T  7945910 ttatttccataagctctccag 7945930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 279 - 390
Target Start/End: Complemental strand, 4248981 - 4248870
Alignment:
Q  279 gatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggagatagtttattcataagcatttgtatgataa 378  Q
    ||||||||| ||||||| ||||| |  || |||||| ||||||||||||| |||||||| | |||| || |||| ||||  ||||||| || ||||| ||    
T  4248981 gatagcttaggaaaacaccttattgtttatacaaaatcaatttgactttattttatcttttgttattgaaatagcttatatataagcacttatatgacaa 4248882  T
Q  379 gcgcttgtgcta 390  Q
    |||||| |||||    
T  4248881 gcgcttatgcta 4248870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 4308930 - 4308847
Alignment:
Q  40 attgtttgaattgatttattttagcttatctactgacataaacaccggtgatgctgtttaaattgactgatttgagcttatcta 123  Q
    |||||||| ||||  |||||| || |||||||||||||||| |||  ||| | ||||||||||||||| |||||| ||||||||    
T  4308930 attgtttggattggcttatttgagtttatctactgacataagcactagtggttctgtttaaattgacttatttgaacttatcta 4308847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 27857496 - 27857429
Alignment:
Q  159 ttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||||||||| || ||||| ||||  |||| |||| ||||||||||||| |||||||||||||||||    
T  27857496 ttatttgagtttatctactgacatagacacttgtgaaactgtttgggagagcttatgaaaacaactta 27857429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 312 - 379
Target Start/End: Complemental strand, 29269886 - 29269819
Alignment:
Q  312 aaaacaatttgactttaatttatcttgttttatggagatagtttattcataagcatttgtatgataag 379  Q
    ||||||||||||||||| |||||||| | |||| || ||||||||| || |||||||| |||||||||    
T  29269886 aaaacaatttgactttattttatcttctgttatagaaatagtttatacacaagcatttatatgataag 29269819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 272 - 422
Target Start/End: Complemental strand, 3155206 - 3155056
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggagatagtttattcataagcatttgt 371  Q
    ||||||||||| |||||||||| | |||||||  || |   ||||| |||||||||  |||||||| | | |  ||||||| |||| ||||| ||||| |    
T  3155206 tctccaggatatcttatgaaaatagcttataggttatatggaaacagtttgactttgttttatcttttgtaaaagagatagcttatacataaccatttat 3155107  T
Q  372 atgataagcgcttgtgctataagctacttagtaagttgtttattcaaacat 422  Q
    ||||||| ||||| ||||||||||   | | |||||||||||| |||||||    
T  3155106 atgataaacgcttatgctataagcgcttaaataagttgtttatccaaacat 3155056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 334
Target Start/End: Original strand, 31776323 - 31776377
Alignment:
Q  280 atagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttat 334  Q
    ||||||||||||||||||||||  | || |||||||||||||||||||| |||||    
T  31776323 atagcttatgaaaacaacttattaattatacaaaaacaatttgactttattttat 31776377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 13908391 - 13908322
Alignment:
Q  146 tgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatg 215  Q
    |||||||||||||||||||||  | || ||||| ||||| |||| |||||||| ||| ||||||||||||    
T  13908391 tgtttgaattgacttatttgaacttatctactgacataaacacttgtgacactctttaggagaacttatg 13908322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 17241090 - 17241159
Alignment:
Q  157 acttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||||||||||| || ||||| ||||| |||| ||||||||| |||||| |||| | ||||||||||||    
T  17241090 acttatttgagtttatatactgacataaacacttgtgacactgattgggaaaactaaggaaaacaactta 17241159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 153 - 226
Target Start/End: Complemental strand, 32171698 - 32171625
Alignment:
Q  153 attgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||| ||||| ||| | |||||||||||||| ||||  |||||||||||| |||| |||| ||||||||||||    
T  32171698 attgatttattcgagcttatttactggcataaccacttctgacactgtttgagagagcttaggaaaacaactta 32171625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 159 - 344
Target Start/End: Complemental strand, 33887968 - 33887788
Alignment:
Q  159 ttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta-gatatgtttaaaagttatttt-agcttattt 256  Q
    ||||||||||| |||||||| ||| |||||| |||||| |||||| ||||| ||||||||| | |||| || ||||| | ||||| |||| | |||||||    
T  33887968 ttatttgagtttatttactgacattagcacttgtgacattgtttgagagaatttatgaaaatagcttatgacatgttcacaagttgttttcaacttattt 33887869  T
Q  257 ccacaagcactccagtctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttat 344  Q
    ||| |||||        | ||||||||||||||||||||  |||| || || || |||||| ||||| |||  |||||||||| ||||    
T  33887868 ccataagca-------tttcaggatagcttatgaaaacagtttattgattatactaaaacagtttgagtttgttttatcttgtgttat 33887788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 337
Target Start/End: Original strand, 281766 - 281953
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta-gatatgtttaaaagtta 243  Q
    ||||||| ||||||||| ||||| | || || || |||||| ||| |||| ||||||||||||| || ||| || ||||||| || |||| || |||||     
T  281766 ctgtttggattgacttacttgagattatgtagtgacataagtacttgtgagactgtttgggagagctaatggaagcaacttatgacatgtctataagttg 281865  T
Q  244 tttt-agcttatttccacaagcactccagtctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatctt 337  Q
    |||| ||||||||||||  |||       |||| ||||||||||||||| ||| |||||||  || |  ||||||| ||||||||| ||||||||    
T  281866 ttttcagcttatttccatgagc-------tctctaggatagcttatgaacacagcttatagcttatatgaaaacaagttgactttattttatctt 281953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 213
Target Start/End: Original strand, 7351589 - 7351657
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaactta 213  Q
    |||||| |||||||||||||||||| || ||||| |||||||||| |||| | |||||  |||||||||    
T  7351589 ctgtttaaattgacttatttgagtttatctactgacataagcacttgtgagattgtttatgagaactta 7351657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 13908392 - 13908349
Alignment:
Q  41 ttgtttgaattgatttattttagcttatctactgacataaacac 84  Q
    ||||||||||||| |||||| | |||||||||||||||||||||    
T  13908392 ttgtttgaattgacttatttgaacttatctactgacataaacac 13908349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 29274309 - 29274376
Alignment:
Q  312 aaaacaatttgactttaatttatcttgttttatggagatagtttattcataagcatttgtatgataag 379  Q
    ||||||||||||||||| |||||||| |  ||| || |||| |||| ||||||||||| |||||||||    
T  29274309 aaaacaatttgactttattttatcttttgctatagaaatagcttatacataagcatttctatgataag 29274376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 395
Target Start/End: Original strand, 31672548 - 31672631
Alignment:
Q  312 aaaacaatttgactttaatttatcttgttttatggagatagtttattcataagcatttgtatgataagcgcttgtgctataagc 395  Q
    |||||| |||||||||| ||||| || | | ||||| ||||||||| ||||| || ||||||||||| |||||  |||||||||    
T  31672548 aaaacagtttgactttattttattttttgtcatggaaatagtttatacataaacacttgtatgataatcgcttaagctataagc 31672631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 283 - 337
Target Start/End: Complemental strand, 2735088 - 2735034
Alignment:
Q  283 gcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatctt 337  Q
    ||||||||||||| |||||||| || ||||||| ||||| |||||| ||||||||    
T  2735088 gcttatgaaaacagcttatagattatacaaaaataatttaactttattttatctt 2735034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 225
Target Start/End: Original strand, 836506 - 836535
Alignment:
Q  196 actgtttgggagaacttatgaaaacaactt 225  Q
    ||||||||||||||||||||||||||||||    
T  836506 actgtttgggagaacttatgaaaacaactt 836535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 2455958 - 2455881
Alignment:
Q  149 ttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||||||||||||||||| | || ||| |||||||||||| | || | ||||| | ||| |||||| ||||||||||    
T  2455958 ttgaattgacttatttgagcttatctaccggcataagcacttgcgagattgtttagaagagcttatggaaacaactta 2455881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 2460069 - 2460150
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||||| ||| ||||||||||| | ||  ||| ||||||| ||| |||| |||||||| |||| |||||| ||||||||||    
T  2460069 ctgtttggattaacttatttgagcttataaactagcataagtacttgtgagactgtttgagagagcttatggaaacaactta 2460150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 3738245 - 3738196
Alignment:
Q  153 attgacttatttgagttaatttactggcataagcactagtgacactgttt 202  Q
    ||||||||||||||||| || |||| ||||||||||| |||| |||||||    
T  3738245 attgacttatttgagtttatctactagcataagcacttgtgagactgttt 3738196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 337
Target Start/End: Complemental strand, 8147724 - 8147667
Alignment:
Q  280 atagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatctt 337  Q
    |||||||||||||||| ||| |||| || ||||||||||||  |||||| ||||||||    
T  8147724 atagcttatgaaaacatcttttagaatatacaaaaacaattcaactttattttatctt 8147667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 225
Target Start/End: Original strand, 10645353 - 10645382
Alignment:
Q  196 actgtttgggagaacttatgaaaacaactt 225  Q
    ||||||||||||||||||||||||||||||    
T  10645353 actgtttgggagaacttatgaaaacaactt 10645382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 30863398 - 30863317
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||||| | |||||||||||||   ||||| |||||||| |||| || | ||| ||||| ||| |||||||||||||||||    
T  30863398 ctgtttggagtgacttatttgagcctatttattggcataaacacttgttagactctttggtagagcttatgaaaacaactta 30863317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 33027743 - 33027706
Alignment:
Q  42 tgtttgaattgatttattttagcttatctactgacata 79  Q
    |||||| |||||||||||| ||||||||||||||||||    
T  33027743 tgtttggattgatttatttgagcttatctactgacata 33027706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 33737722 - 33737641
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||||| | ||||||||| ||||| || || || ||||| |||| |||  |||||||| ||||||||||||| ||||||||    
T  33737722 ctgtttggaatgacttattcgagtttatctattgacataaacacttgtgcaactgtttgagagaacttatgaacacaactta 33737641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 272 - 300
Target Start/End: Complemental strand, 103461 - 103433
Alignment:
Q  272 tctccaggatagcttatgaaaacaactta 300  Q
    |||||||||||||||||||||||||||||    
T  103461 tctccaggatagcttatgaaaacaactta 103433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 272 - 380
Target Start/End: Original strand, 2727896 - 2728004
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggagatagtttattcataagcatttgt 371  Q
    |||| |||||||||||||||||||||||||||  || |  || ||||||||| |||  |||||||| | |||| ||   || |||| |||||||| || |    
T  2727896 tctctaggatagcttatgaaaacaacttatagcttatatcaatacaatttgatttttgtttatcttttgttatagaagcagcttatacataagcacttat 2727995  T
Q  372 atgataagc 380  Q
    |||||||||    
T  2727996 atgataagc 2728004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 6909912 - 6909968
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgacttta 328  Q
    |||||| ||||  |||||||||||||||||||  || ||||||||||||| ||||||    
T  6909912 tctccaagatatgttatgaaaacaacttatagcatatacaaaaacaatttaacttta 6909968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 393
Target Start/End: Original strand, 7351725 - 7351769
Alignment:
Q  349 atagtttattcataagcatttgtatgataagcgcttgtgctataa 393  Q
    ||||||||| ||||||||||| ||||||||| |||| ||||||||    
T  7351725 atagtttatacataagcatttatatgataagagcttatgctataa 7351769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 33067188 - 33067133
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgacttta 328  Q
    |||||| ||||||||||||||||||||||||| ||| |  ||||||||| |||||||    
T  33067188 tctccaagatagcttatgaaaacaacttatag-ctaaatgaaaacaattcgacttta 33067133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 8e-25; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 30535715 - 30535625
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta-gatatgtt 234  Q
    |||||||||||||||||||||||||||||||||| ||||| |||| | || ||||||| ||||||||||||||||||||||| ||||||||    
T  30535715 ctgtttgaattgacttatttgagttaatttactgacataaacacttgagagactgttttggagaacttatgaaaacaacttatgatatgtt 30535625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 276 - 395
Target Start/End: Original strand, 39169459 - 39169578
Alignment:
Q  276 caggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggagatagtttattcataagcatttgtatga 375  Q
    ||||||||||||||||||||  ||||||| || ||||||||| | |||||| | ||| |||||| | ||||| |||| |||||| |||||  |  |||||    
T  39169459 caggatagcttatgaaaacagtttatagattatacaaaaacagtctgacttcattttttcttgtgtaatggaaatagcttattcgtaagcgctcatatga 39169558  T
Q  376 taagcgcttgtgctataagc 395  Q
    ||||||||| ||||||||||    
T  39169559 taagcgcttatgctataagc 39169578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 279 - 364
Target Start/End: Complemental strand, 12110383 - 12110298
Alignment:
Q  279 gatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggagatagtttattcataag 364  Q
    ||||||||||||||||| |||||||  || || ||||||||||||||||| |||||||||| | || || |||| |||||||||||    
T  12110383 gatagcttatgaaaacagcttatagcttataccaaaacaatttgactttattttatcttgtgtaatagaaataggttattcataag 12110298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 148 - 219
Target Start/End: Original strand, 3836604 - 3836675
Alignment:
Q  148 tttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaa 219  Q
    |||| |||| |||||||||| | || ||||||| |||||||| |||| ||||||||||||||||||||||||    
T  3836604 tttggattgccttatttgagcttatctactggcttaagcacttgtgaaactgtttgggagaacttatgaaaa 3836675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 312 - 383
Target Start/End: Complemental strand, 35536097 - 35536026
Alignment:
Q  312 aaaacaatttgactttaatttatcttgttttatggagatagtttattcataagcatttgtatgataagcgct 383  Q
    ||||||||||||||||| |||||||| | |||| || |||| |||| ||||||| ||| |||||||||||||    
T  35536097 aaaacaatttgactttattttatcttatgttatagaaatagcttatacataagcctttatatgataagcgct 35536026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 278 - 369
Target Start/End: Complemental strand, 46945933 - 46945842
Alignment:
Q  278 ggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggagatagtttattcataagcattt 369  Q
    |||||||||| |||||||| ||||||| || |||  |||||||||| || | |||||||||| ||||  | |||| ||||||||||||||||    
T  46945933 ggatagcttaagaaaacaaattatagattatacatgaacaatttgatttgattttatcttgtgttatacaaatagcttattcataagcattt 46945842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 421
Target Start/End: Original strand, 425749 - 426011
Alignment:
Q  153 attgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaa-caactta-gatatgtttaaaagttatttt-ag 249  Q
    |||| |||||||||| | || |||||||||||||||  ||| ||||||||||||||||||| ||||| || |||| || ||||| | ||| |||||  ||    
T  425749 attggcttatttgagattatctactggcataagcacatgtggcactgtttgggagaacttacgaaaaacagcttatgacatgttcataagctatttccag 425848  T
Q  250 cttatttccacaagcactccagtctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggaga 349  Q
    ||||||| |||  ||       |||||| ||||| |||||||| || |||||||| || |||||  || |||||||||| |||||||||| |||| ||      
T  425849 cttattttcactggc-------tctccatgatagtttatgaaagcagcttatagattacacaaa--cagtttgactttattttatcttgtattatagaat 425939  T
Q  350 tagtttattcataagcatttgtatgataagcgcttgtgctataagctacttagtaagttgtttattcaaaca 421  Q
    ||  || |||||||| | || ||  |||||||||| ||||||||||| |  | |||||| ||||| ||||||    
T  425940 taacttgttcataagaaattatacaataagcgcttatgctataagctgcaaaataagttatttatccaaaca 426011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 4970710 - 4970790
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||||| ||||||||||||||| | || |  || ||||||  || |||| |||||||||||||||||||||||||||||||    
T  4970710 ctgtttggattgacttatttgagcttatctcgtgacataagt-cttgtgagactgtttgggagaacttatgaaaacaactta 4970790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 222
Target Start/End: Original strand, 30748952 - 30749029
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaa 222  Q
    ||||||||||||| ||||||||| | || ||||| |||||||    |||| |||||||| ||||||||||||||||||    
T  30748952 ctgtttgaattgagttatttgagcttatctactgacataagccaatgtgagactgtttgagagaacttatgaaaacaa 30749029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 22387815 - 22387895
Alignment:
Q  146 tgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||||| ||||||||| | ||  | |||||||| ||||| |||  |||| ||||||||||||| |||||||||||||||||    
T  22387815 tgtttggattgacttactagaacttatttactgacataaacacgtgtgagactgtttgggagagcttatgaaaacaactta 22387895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 146 - 226
Target Start/End: Complemental strand, 23215006 - 23214926
Alignment:
Q  146 tgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||||| ||||||||||||||  | || |||| |||||| ||||  ||| |||||||| ||||| ||||||||||||||||    
T  23215006 tgtttggattgacttatttgaccttatctactagcataaacacttatgagactgtttgagagaatttatgaaaacaactta 23214926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 270
Target Start/End: Original strand, 25670511 - 25670631
Alignment:
Q  152 aattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta-gatatgtttaaaagttatttt-ag 249  Q
    |||||||||| ||||| | || || || ||||||| || |||| |||||||| || ||||||||||||||||||| || ||||| | || || |||| ||    
T  25670511 aattgacttacttgagcttatctattgacataagctcttgtgagactgtttgagaaaacttatgaaaacaacttatgacatgttaataaattgttttcag 25670610  T
Q  250 cttatttccacaagcactcca 270  Q
    ||||||| ||||||| |||||    
T  25670611 cttattttcacaagctctcca 25670631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 44821989 - 44821933
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgacttta 328  Q
    ||||||| |||||||||||||||| ||||||   || ||||||||||||||||||||    
T  44821989 tctccagaatagcttatgaaaacagcttataacttatacaaaaacaatttgacttta 44821933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 529506 - 529443
Alignment:
Q  153 attgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatga 216  Q
    ||||||||||||||| | || ||||||||||| |||| ||||  || |||||||||||||||||    
T  529506 attgacttatttgagcttatctactggcataaacacttgtgaggctatttgggagaacttatga 529443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 363
Target Start/End: Complemental strand, 1417294 - 1417203
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggagatagtttattcataa 363  Q
    |||||| | ||||||||||||||||||||| |  || |  ||||||||||||||||| |||||||| | ||||  | ||||||||| |||||    
T  1417294 tctccatgctagcttatgaaaacaacttattgcttatatgaaaacaatttgactttattttatcttttgttatataaatagtttatacataa 1417203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 384
Target Start/End: Complemental strand, 30496721 - 30496622
Alignment:
Q  285 ttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggagatagtttattcataagcatttgtatgataagcgctt 384  Q
    ||||||||||||| |||||  || || ||||||||||||||||| ||||| || | |||| || ||||||||| ||||| || || | ||||| ||||||    
T  30496721 ttatgaaaacaacctataggttatacgaaaacaatttgactttattttatattttgttatagaaatagtttatacataaacacttatgtgatatgcgctt 30496622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 189
Target Start/End: Complemental strand, 7513709 - 7513667
Alignment:
Q  147 gtttgaattgacttatttgagttaatttactggcataagcact 189  Q
    ||||||||||||||||||||| | || ||||||||||||||||    
T  7513709 gtttgaattgacttatttgagcttatctactggcataagcact 7513667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 80
Target Start/End: Original strand, 19302482 - 19302520
Alignment:
Q  42 tgtttgaattgatttattttagcttatctactgacataa 80  Q
    |||||||||||| |||||| |||||||||||||||||||    
T  19302482 tgtttgaattgacttatttgagcttatctactgacataa 19302520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 226
Target Start/End: Complemental strand, 22759306 - 22759232
Alignment:
Q  152 aattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||||||||||||||| | || |||||||||||||||||| || || ||| | |||| |||||| ||||| ||||    
T  22759306 aattgacttatttgagcttatctactggcataagcactagcgagacagttcgagagagcttatggaaacagctta 22759232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 302
Target Start/End: Original strand, 24363641 - 24363671
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttata 302  Q
    |||||||||||||||||||||||||||||||    
T  24363641 tctccaggatagcttatgaaaacaacttata 24363671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 226
Target Start/End: Complemental strand, 28844639 - 28844561
Alignment:
Q  148 tttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||||||||||| |||||| |  |||| || |||||||||  |||| ||||||| ||||| ||| |||||||||||||    
T  28844639 tttgaattgacttgtttgagcttgtttattgtcataagcacatgtgatactgtttaggagagcttctgaaaacaactta 28844561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 80
Target Start/End: Original strand, 30748953 - 30748991
Alignment:
Q  42 tgtttgaattgatttattttagcttatctactgacataa 80  Q
    |||||||||||| |||||| |||||||||||||||||||    
T  30748953 tgtttgaattgagttatttgagcttatctactgacataa 30748991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 421
Target Start/End: Complemental strand, 31341177 - 31341075
Alignment:
Q  319 tttgactttaatttatcttgttttatggagatagtttattcataagcatttgtatgataagcgcttgtgctataagctacttagtaagttgtttattcaa 418  Q
    |||||||||| |||||||| | ||||  | |||| |||| |||||||||||  ||||||||||||| ||| ||||||   | | |||||||||||| |||    
T  31341177 tttgactttattttatcttttgttatacaaatagcttatacataagcatttagatgataagcgcttatgcaataagcgcttgattaagttgtttatccaa 31341078  T
Q  419 aca 421  Q
    |||    
T  31341077 aca 31341075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 373 - 419
Target Start/End: Complemental strand, 42656443 - 42656397
Alignment:
Q  373 tgataagcgcttgtgctataagctacttagtaagttgtttattcaaa 419  Q
    |||||||||||| |||||||||||||| |  ||||||||||||||||    
T  42656443 tgataagcgcttatgctataagctactaatgaagttgtttattcaaa 42656397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 145 - 223
Target Start/End: Original strand, 43854959 - 43855037
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaac 223  Q
    |||||||||||| |||||||||  | || ||||  |||||||| | | |||||| ||||||||| ||||||||||||||    
T  43854959 ctgtttgaattggcttatttgaacttatctactaacataagcatttgcgacactatttgggagagcttatgaaaacaac 43855037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 5288248 - 5288195
Alignment:
Q  160 tatttgagttaatttactggcataagcactagtgacactgtttgggagaactta 213  Q
    |||||||| |||| |||| |||||||||||  ||| ||||||||||||||||||    
T  5288248 tatttgagctaatctactagcataagcacttatgagactgtttgggagaactta 5288195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 379
Target Start/End: Original strand, 9527140 - 9527237
Alignment:
Q  282 agcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggagatagtttattcataagcatttgtatgataag 379  Q
    ||||||||||||||||||||||  || |  |||||| |||||||||| | |||||| | |||| || ||||  |||  ||||||| ||||||||||||    
T  9527140 agcttatgaaaacaacttatagtttatatgaaaacagtttgactttattatatcttttgttatagatatagcgtatatataagcacttgtatgataag 9527237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 34036068 - 34036031
Alignment:
Q  42 tgtttgaattgatttattttagcttatctactgacata 79  Q
    |||||||||||| |||||| ||||||||||||||||||    
T  34036068 tgtttgaattgacttatttgagcttatctactgacata 34036031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 339
Target Start/End: Complemental strand, 45530545 - 45530484
Alignment:
Q  278 ggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgt 339  Q
    |||||| ||||||||||||||| || | || ||| ||||| ||||| |||||||||||||||    
T  45530545 ggatagattatgaaaacaacttttatattatacacaaacagtttgattttaatttatcttgt 45530484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 221
Target Start/End: Complemental strand, 45593681 - 45593605
Alignment:
Q  145 ctgtttgaattgacttatttgagttaat-ttactggcataagcactagtgacactgtttgggagaacttatgaaaaca 221  Q
    ||||||| |||| |||||||||||| || |||||| |||||||  | |||| ||||||||||||||||||| ||||||    
T  45593681 ctgtttggattggcttatttgagtttatattactgacataagcttt-gtgagactgtttgggagaacttataaaaaca 45593605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 337
Target Start/End: Complemental strand, 48470066 - 48470009
Alignment:
Q  280 atagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatctt 337  Q
    |||||||||||||||||||||||   || ||||||||||||| |||| | ||||||||    
T  48470066 atagcttatgaaaacaacttatattatatacaaaaacaatttaacttaattttatctt 48470009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 146 - 214
Target Start/End: Complemental strand, 1418570 - 1418502
Alignment:
Q  146 tgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttat 214  Q
    |||||| ||||||||||||||| | || ||||||||||||||||  |||  ||||||| |||| |||||    
T  1418570 tgtttggattgacttatttgagcttatctactggcataagcacttatgaggctgtttgtgagagcttat 1418502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 1431939 - 1431987
Alignment:
Q  173 ttactggcataagcactagtgacactgtttgggagaacttatgaaaaca 221  Q
    ||||||||||||||||| |||| ||||||| ||||| |||||| |||||    
T  1431939 ttactggcataagcacttgtgagactgtttaggagagcttatggaaaca 1431987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 145 - 221
Target Start/End: Original strand, 3610658 - 3610734
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaaca 221  Q
    |||||||||||| |||||||||| | || ||||||| ||| |||| |||| ||| ||||||| | |||||| |||||    
T  3610658 ctgtttgaattggcttatttgagcttatctactggcctaaccacttgtgatactttttgggaaaccttatggaaaca 3610734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 25907406 - 25907442
Alignment:
Q  153 attgacttatttgagttaatttactggcataagcact 189  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  25907406 attggcttatttgagttaatttactgacataagcact 25907442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 271 - 303
Target Start/End: Complemental strand, 28076588 - 28076556
Alignment:
Q  271 gtctccaggatagcttatgaaaacaacttatag 303  Q
    ||||||||||| |||||||||||||||||||||    
T  28076588 gtctccaggattgcttatgaaaacaacttatag 28076556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 272 - 340
Target Start/End: Complemental strand, 47941353 - 47941285
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgtt 340  Q
    ||||| ||||||||||||||||||  ||||||| || || |||| |||||||| ||| ||| |||||||    
T  47941353 tctccgggatagcttatgaaaacagtttatagattatactaaaataatttgaccttattttgtcttgtt 47941285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 3e-21; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 2487927 - 2488007
Alignment:
Q  146 tgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||||| |||| |||||||||||| || ||||| |||||||||| |||| |||||||||||||||||||||||||||||||    
T  2487927 tgtttggattggcttatttgagttcatctactgacataagcacttgtgagactgtttgggagaacttatgaaaacaactta 2488007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 272 - 366
Target Start/End: Complemental strand, 34770922 - 34770828
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggagatagtttattcataagca 366  Q
    |||| |||||||||||||||||||||||||||  || |  ||||||||||||||||| |||||||| | | ||||| ||||||| | ||||||||    
T  34770922 tctctaggatagcttatgaaaacaacttatagcttaaatgaaaacaatttgactttattttatcttttgtaatggaaatagtttttacataagca 34770828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 157 - 336
Target Start/End: Original strand, 42215230 - 42215410
Alignment:
Q  157 acttatttgagttaatttactggcataagcact------agtgacactgtttgggagaacttatgaaaacaactta-gatatgtttaaaagttatttt-a 248  Q
    ||||||||||| | |||||||||||||||||||      |||||||||||||||||||||| ||||||||| |||| ||  |||| | ||| | |||| |    
T  42215230 acttatttgagcttatttactggcataagcacttacgacagtgacactgtttgggagaactaatgaaaacagcttatgacttgttcataagctgttttca 42215329  T
Q  249 gcttatttccacaagcactccagtctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatct 336  Q
    |||||||| || ||||       ||||||||||||| |||||||| |  ||||||| || ||||||||| |||||||||| |||||||    
T  42215330 gcttatttacataagc-------tctccaggatagcatatgaaaataggttatagattatacaaaaacagtttgactttattttatct 42215410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 42215035 - 42215084
Alignment:
Q  172 tttactggcataagcactagtgacactgtttgggagaacttatgaaaaca 221  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  42215035 tttactagcataagcacttgtgacactgtttgggagaacttatgaaaaca 42215084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 272 - 340
Target Start/End: Original strand, 6509343 - 6509411
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgtt 340  Q
    |||||||||||||||||||||||| |||||||  || | ||| |||||||||||||| |||||||||||    
T  6509343 tctccaggatagcttatgaaaacagcttatagcttatataaatacaatttgactttattttatcttgtt 6509411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 394
Target Start/End: Complemental strand, 14482193 - 14482110
Alignment:
Q  311 aaaaacaatttgactttaatttatcttgttttatggagatagtttattcataagcatttgtatgataagcgcttgtgctataag 394  Q
    |||||||||||||||||| |||||||| | |||| || ||||||||| |||||||| || |||||||||| ||  |||||||||    
T  14482193 aaaaacaatttgactttattttatcttttgttatagaaatagtttatacataagcacttatatgataagcactaatgctataag 14482110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 158 - 259
Target Start/End: Original strand, 30191072 - 30191175
Alignment:
Q  158 cttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta-gatatgtttaaaagttatttt-agcttatt 255  Q
    |||||||||||| || || ||||||||||||| || | ||||||||||||| |||||| |||||||||| || ||||| |||| || |||| ||||||||    
T  30191072 cttatttgagtttatctattggcataagcacttgttagactgtttgggagagcttatggaaacaacttatgacatgttcaaaacttgttttcagcttatt 30191171  T
Q  256 tcca 259  Q
    ||||    
T  30191172 tcca 30191175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 145 - 363
Target Start/End: Complemental strand, 7646358 - 7646145
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta-gatatgtttaaaagtta 243  Q
    ||||||| |||| ||||||| || | |  ||||| ||||||||||||||||| |||||||||||| ||||||||||  |||| || ||||| |  || ||    
T  7646358 ctgtttgtattgccttatttaagcttaactactgacataagcactagtgacaatgtttgggagaatttatgaaaactgcttatgacatgttgatcagcta 7646259  T
Q  244 tttt-agcttatttccacaagcactccagtctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgtttt 342  Q
    |||| |||||||||||| ||||       ||||| ||  |||||||||| |||  ||||||| || ||||||||||||| |||||| |||| ||| | ||    
T  7646258 ttttcagcttatttccataagc-------tctcctggtcagcttatgaagacagtttatagattatacaaaaacaatttaactttattttaccttttctt 7646166  T
Q  343 atggagatagtttattcataa 363  Q
    || || |||| |||| |||||    
T  7646165 atagaaatagcttatacataa 7646145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 7853502 - 7853452
Alignment:
Q  174 tactggcataagcactagtgacactgtttgggagaacttatgaaaacaact 224  Q
    ||||||||||||||||||||| ||| ||||||||||||| |||||||||||    
T  7853502 tactggcataagcactagtgagactatttgggagaacttgtgaaaacaact 7853452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 282 - 362
Target Start/End: Complemental strand, 926508 - 926427
Alignment:
Q  282 agcttatgaaaacaacttatagactagacaaaaaca-atttgactttaatttatcttgttttatggagatagtttattcata 362  Q
    |||||||||||||||||||||||  | |||||||||  |||||||||| |||||||||| |||| || |||| |||||||||    
T  926508 agcttatgaaaacaacttatagataatacaaaaacagttttgactttattttatcttgtgttatagaaatagcttattcata 926427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 194
Target Start/End: Complemental strand, 7008750 - 7008701
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtga 194  Q
    ||||||||||||||||||||||||| || |||||||||||||||| ||||    
T  7008750 ctgtttgaattgacttatttgagtttatctactggcataagcacttgtga 7008701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 16162912 - 16162831
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||||| |||| |||||||||||| || |||| |||||| |||| |||| |||||||| || |||||||||||||| ||||    
T  16162912 ctgtttggattggcttatttgagtttatctactagcataaacacttgtgagactgtttgagaaaacttatgaaaacagctta 16162831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 101 - 151
Target Start/End: Complemental strand, 2606193 - 2606143
Alignment:
Q  101 attgactgatttgagcttatctactggtataatcactagtgaaactgtttg 151  Q
    ||||||| ||| ||||||||||||||  |||||||||||||||||||||||    
T  2606193 attgacttattcgagcttatctactgacataatcactagtgaaactgtttg 2606143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 6950466 - 6950396
Alignment:
Q  153 attgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaac 223  Q
    ||||||||||||||||| || ||||||||||| || | |||| | ||||||||||| |||||| |||||||    
T  6950466 attgacttatttgagtttatctactggcataaacatttgtgagattgtttgggagagcttatgtaaacaac 6950396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 146 - 208
Target Start/End: Original strand, 14926901 - 14926963
Alignment:
Q  146 tgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggaga 208  Q
    |||||| ||||||||||||||  | ||||||||||||||||||| |||| |||||||| ||||    
T  14926901 tgtttggattgacttatttgaacttatttactggcataagcacttgtgagactgtttgagaga 14926963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 421
Target Start/End: Original strand, 41336692 - 41336834
Alignment:
Q  279 gatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggagatagtttattcataagcatttgtatgataa 378  Q
    |||||||||||||||||| || |||  || |  |||||||||||||| || |||||||| | | ||  | ||  ||||| ||||||||||| | ||||||    
T  41336692 gatagcttatgaaaacaagttctagtttatatgaaaacaatttgactatattttatcttttgtcataaaaatgatttatacataagcatttatttgataa 41336791  T
Q  379 gcgcttgtgctataagctacttagtaagttgtttattcaaaca 421  Q
     ||||| |||||||||| | | | |||||||||||| ||||||    
T  41336792 acgcttatgctataagcaattaattaagttgtttatccaaaca 41336834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 145 - 219
Target Start/End: Original strand, 44236741 - 44236815
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaa 219  Q
    ||||||| |||  |||||||||||| || |||||||||||||||| |||| |||||| |||||||  ||||||||    
T  44236741 ctgtttggattaccttatttgagtttatctactggcataagcacttgtgagactgttcgggagaatctatgaaaa 44236815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 6526170 - 6526251
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||||| ||||||||||| |||   || ||||||||||||| || |||| | |||||| ||||||||| ||||||||||||    
T  6526170 ctgtttggattgacttattcgagcctatctactggcataagcccttgtgagattgtttgagagaacttaggaaaacaactta 6526251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 7918700 - 7918780
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||||||||||| |||||| |  | || |||| |||||| |||| |||| ||||||||||||| |||||||||||||||||    
T  7918700 ctgtttgaattga-ttatttaaacttatctactagcataaacacttgtgagactgtttgggagagcttatgaaaacaactta 7918780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 38537743 - 38537662
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||||||  |||||| ||||||||| || |||||| ||| ||| | |||||| |||| ||| ||||||||||||||||||||    
T  38537743 ctgtttgggttgactcatttgagtttatctactggtataggcatttgtgacattgttcgggggaacttatgaaaacaactta 38537662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 1664510 - 1664450
Alignment:
Q  156 gacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatga 216  Q
    |||||||||||||| || |||| |||||| |||| |||| ||||||||||||| |||||||    
T  1664510 gacttatttgagtttatctactagcataaacacttgtgagactgtttgggagagcttatga 1664450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 344
Target Start/End: Complemental strand, 3269708 - 3269652
Alignment:
Q  288 tgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttat 344  Q
    ||||||||||||||||| || |||||| ||||| ||||||| |||||||||| ||||    
T  3269708 tgaaaacaacttatagattatacaaaatcaattcgactttattttatcttgtgttat 3269652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 214
Target Start/End: Complemental strand, 3953925 - 3953885
Alignment:
Q  174 tactggcataagcactagtgacactgtttgggagaacttat 214  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  3953925 tactggcataagcacttgtgaaactgtttgggagaacttat 3953885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 24326167 - 24326107
Alignment:
Q  161 atttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaaca 221  Q
    ||||||| | || |||||||||||||||| |||| ||||||||||||| |||||| |||||    
T  24326167 atttgagcttatctactggcataagcacttgtgagactgtttgggagagcttatggaaaca 24326107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 34771011 - 34770939
Alignment:
Q  154 ttgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||||||||||||||| || | || ||||||||||| |||| |||||||| |||| | |||||||||| ||||    
T  34771011 ttgacttatttgagtttatctgctagcataagcacttgtgaaactgtttgagagatcctatgaaaacagctta 34770939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 34849227 - 34849176
Alignment:
Q  174 tactggcataagcactagtgacactgtttgggagaacttatgaaaacaactt 225  Q
    |||||||||||| |||  ||| |||||||||||||||| |||||||||||||    
T  34849227 tactggcataagtacttttgagactgtttgggagaactaatgaaaacaactt 34849176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 145 - 223
Target Start/End: Complemental strand, 778541 - 778463
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaac 223  Q
    |||||||  ||||||||||||   | ||||||||  ||||||||| |||| ||||||||  ||||||||||||||||||    
T  778541 ctgtttggtttgacttatttgtacttatttactgaaataagcacttgtgagactgtttgcaagaacttatgaaaacaac 778463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 208
Target Start/End: Complemental strand, 2606200 - 2606138
Alignment:
Q  146 tgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggaga 208  Q
    |||||| ||||||||||| ||| | || ||||| ||||| ||||||||| |||||||||||||    
T  2606200 tgtttggattgacttattcgagcttatctactgacataatcactagtgaaactgtttgggaga 2606138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 226
Target Start/End: Original strand, 32840954 - 32840984
Alignment:
Q  196 actgtttgggagaacttatgaaaacaactta 226  Q
    |||||||||||||||||||||||||||||||    
T  32840954 actgtttgggagaacttatgaaaacaactta 32840984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 365
Target Start/End: Original strand, 37353296 - 37353381
Alignment:
Q  279 gatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggagatagtttattcataagc 365  Q
    ||||||||| ||||||| |||||||  || ||||||||||||| ||||| ||||||||| | |||| || ||||||| | |||||||    
T  37353296 gatagcttaagaaaacagcttatagcatacacaaaaacaatttaacttt-atttatcttttgttatagaaatagtttgtacataagc 37353381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 226
Target Start/End: Original strand, 39551130 - 39551208
Alignment:
Q  148 tttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||| ||||||||||||||| | || ||| |  ||||||| | |||| |||||||||||||| ||||| ||||||||||    
T  39551130 tttggattgacttatttgagattatctacggatataagcatttgtgaaactgtttgggagaatttatggaaacaactta 39551208  T

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Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 337
Target Start/End: Complemental strand, 2093305 - 2093244
Alignment:
Q  276 caggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatctt 337  Q
    |||||||||| |||||||||||||||||  || |  ||||| ||||||||||| ||||||||    
T  2093305 caggatagctaatgaaaacaacttatagcttaaaagaaaaccatttgactttattttatctt 2093244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 340
Target Start/End: Complemental strand, 2482880 - 2482827
Alignment:
Q  287 atgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgtt 340  Q
    ||||||||| |||||||  || ||||||||| |||||||||| |||||||||||    
T  2482880 atgaaaacagcttatagcttatacaaaaacattttgactttattttatcttgtt 2482827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 303
Target Start/End: Complemental strand, 24558885 - 24558852
Alignment:
Q  270 agtctccaggatagcttatgaaaacaacttatag 303  Q
    |||||||| |||||||||||||||||||||||||    
T  24558885 agtctccaagatagcttatgaaaacaacttatag 24558852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 337
Target Start/End: Complemental strand, 38561748 - 38561691
Alignment:
Q  280 atagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatctt 337  Q
    |||| |||||||||||||||||||  |||| ||||| | |||||||||| ||||||||    
T  38561748 atagtttatgaaaacaacttatagtatagataaaaatagtttgactttattttatctt 38561691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 226
Target Start/End: Complemental strand, 43504895 - 43504822
Alignment:
Q  153 attgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||| ||||||| || | || ||||||| |||||||| |||  ||||||| |||||||| ||||||||||||||    
T  43504895 attggcttatttaagcttatctactggcttaagcacttgtgtgactgtttcggagaactgatgaaaacaactta 43504822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 1889064 - 1889124
Alignment:
Q  156 gacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatga 216  Q
    |||||||||||||| || ||||||||||| ||||  ||| ||||||||||| | |||||||    
T  1889064 gacttatttgagtttatctactggcataaacacttttgagactgtttgggaaagcttatga 1889124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 2482980 - 2482936
Alignment:
Q  180 cataagcactagtgacactgtttgggagaacttatgaaaacaact 224  Q
    ||||||| || |||| |||||||||||||||||| ||||||||||    
T  2482980 cataagcccttgtgagactgtttgggagaacttaagaaaacaact 2482936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 302
Target Start/End: Complemental strand, 5383179 - 5383151
Alignment:
Q  274 tccaggatagcttatgaaaacaacttata 302  Q
    |||||||||||||||||||||||||||||    
T  5383179 tccaggatagcttatgaaaacaacttata 5383151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 221
Target Start/End: Complemental strand, 10939519 - 10939451
Alignment:
Q  153 attgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaaca 221  Q
    ||||| ||||||||||| || |||  | |||||||||  ||| ||||||| ||||||||||||||||||    
T  10939519 attgaattatttgagtttatctacctgtataagcacttctgagactgtttaggagaacttatgaaaaca 10939451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 356
Target Start/End: Complemental strand, 29205830 - 29205754
Alignment:
Q  280 atagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggagatagttta 356  Q
    |||| ||||||||| |||||||||  || ||||||||||||| |||| | |||||||| || ||| || ||||||||    
T  29205830 atagtttatgaaaataacttatagcatatacaaaaacaatttaacttcattttatctttttctatagaaatagttta 29205754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 29417530 - 29417586
Alignment:
Q  42 tgtttgaattgatttattttagcttatctactgacataaacaccggtgatgctgttt 98  Q
    |||||||||||  ||||||||||||||| || |||||||||||  |||| |||||||    
T  29417530 tgtttgaattggcttattttagcttatcgaccgacataaacacttgtgaggctgttt 29417586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 31875542 - 31875594
Alignment:
Q  174 tactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||| |||||| |||||||||||||||||| || | |||||| ||||||||||    
T  31875542 tactagcataaacactagtgacactgtttgagaaagcttatggaaacaactta 31875594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 145 - 213
Target Start/End: Original strand, 36963272 - 36963339
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaactta 213  Q
    ||||||| |||| |||||||||| |||| ||||||||||||   | |||| ||||||||||||||||||    
T  36963272 ctgtttggattggcttatttgagctaatctactggcataag-ttttgtgagactgtttgggagaactta 36963339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 272 - 392
Target Start/End: Original strand, 38036152 - 38036272
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggagatagtttattcataagcatttgt 371  Q
    |||||| ||||||| || ||||||  ||||||  || ||||||||||||||| |||| ||||| || | |||   | ||||||||| |||||||| || |    
T  38036152 tctccaagatagctaatcaaaacagtttatagcttacacaaaaacaatttgaatttattttattttttgttaaataaatagtttatacataagcacttat 38036251  T
Q  372 atgataagcgcttgtgctata 392  Q
    |  |||||||||| |||||||    
T  38036252 agaataagcgcttatgctata 38036272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 8e-19; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 278 - 362
Target Start/End: Complemental strand, 4090373 - 4090289
Alignment:
Q  278 ggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggagatagtttattcata 362  Q
    |||||||||||| |||||||||||||| || ||  |||||||||||||||| |||||||||| ||||||| |||| |||||||||    
T  4090373 ggatagcttatgtaaacaacttatagattataccgaaacaatttgactttattttatcttgtgttatggaaatagcttattcata 4090289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 43529776 - 43529857
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||||||||||||||||||||| | || || ||| |||||||||  |||||||||||||||||| ||||||||||| ||||    
T  43529776 ctgtttgaattgacttatttgagcttatctattggtataagcacttctgacactgtttgggagaatttatgaaaacagctta 43529857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 787455 - 787403
Alignment:
Q  174 tactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||| ||||    
T  787455 tactggcataagcacttgtgacactgtttgtgagaacttatgaaaacagctta 787403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 313 - 421
Target Start/End: Original strand, 41880584 - 41880692
Alignment:
Q  313 aaacaatttgactttaatttatcttgttttatggagatagtttattcataagcatttgtatgataagcgcttgtgctataagctacttagtaagttgttt 412  Q
    |||||||||  ||||| |||||| ||| | || || ||||| |||| ||||||| ||  ||||||||||||||||||||||||| |  ||||||||||||    
T  41880584 aaacaattttgctttattttatcgtgtgtaatagaaatagtatatttataagcaattacatgataagcgcttgtgctataagctgcaaagtaagttgttt 41880683  T
Q  413 attcaaaca 421  Q
    || ||||||    
T  41880684 atccaaaca 41880692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 277 - 344
Target Start/End: Complemental strand, 41407100 - 41407033
Alignment:
Q  277 aggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttat 344  Q
    |||||||||||||||||||||||||||| || |||||| || ||| |||||| |||||||||| ||||    
T  41407100 aggatagcttatgaaaacaacttatagaatatacaaaagcagtttaactttattttatcttgtgttat 41407033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 272 - 337
Target Start/End: Complemental strand, 11513928 - 11513863
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatctt 337  Q
    |||||| |||||||||||||||||||||||||  || |  ||||||||||||||||| ||||||||    
T  11513928 tctccatgatagcttatgaaaacaacttatagcttatatgaaaacaatttgactttattttatctt 11513863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 22878249 - 22878173
Alignment:
Q  146 tgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaa 222  Q
    |||||| ||||||||||||||| | ||  |||| |||||||||| |||| ||||||||||||| |||||| ||||||    
T  22878249 tgtttggattgacttatttgagcttatccactgacataagcacttgtgagactgtttgggagaccttatggaaacaa 22878173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 146 - 233
Target Start/End: Original strand, 5759494 - 5759581
Alignment:
Q  146 tgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaacttagatatgt 233  Q
    ||||||| || ||||||||||||| || || ||| ||||| ||| |||| ||||||||||||| |||||| ||||| |||||| ||||    
T  5759494 tgtttgagtttacttatttgagtttatctattggtataagtacttgtgagactgtttgggagagcttatggaaacagcttagacatgt 5759581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 194 - 369
Target Start/End: Complemental strand, 41817271 - 41817101
Alignment:
Q  194 acactgtttgggagaacttatgaaaacaactta-gatatgtttaaaagttatttt-agcttatttccacaagcactccagtctccaggatagcttatgaa 291  Q
    ||||||||| |||||| ||||||||||| |||| || ||||| | || || |||| |||||||||||| ||||       |||||||||||| |||||||    
T  41817271 acactgtttaggagaatttatgaaaacatcttatgacatgttgataatttgttttcagcttatttccataagc-------tctccaggatagtttatgaa 41817179  T
Q  292 aacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggagatagtttattcataagcattt 369  Q
    || | |||| | | || ||||||| | ||||  |||||||| |||||| |||| || |||| ||||||||||||||||    
T  41817178 aatagcttacacattatacaaaaatagtttgcttttaatttctcttgtgttatagaaatagcttattcataagcattt 41817101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 8017586 - 8017496
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta-gatatgtt 234  Q
    ||||||| ||||||||||||||| | || || || |||||||||| |||  | | |||||||||||||||||||||| |||| ||||||||    
T  8017586 ctgtttggattgacttatttgaggttatctattgacataagcacttgtgcgattatttgggagaacttatgaaaacagcttatgatatgtt 8017496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 226
Target Start/End: Original strand, 28803451 - 28803529
Alignment:
Q  148 tttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||| ||||||||||||||| | || ||| |||||||||||  |||| |||||||| |||||| |||| ||||||||||    
T  28803451 tttggattgacttatttgagcttatctaccggcataagcacatgtgagactgtttgagagaacatatggaaacaactta 28803529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 30552562 - 30552620
Alignment:
Q  94 tgtttaaattgactgatttgagcttatctactggtataatcactagtgaaactgtttga 152  Q
    |||||| ||||||  |||||||||||||||||||||||| ||||  |||||||||||||    
T  30552562 tgtttagattgacatatttgagcttatctactggtataagcacttttgaaactgtttga 30552620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 1318387 - 1318307
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||||||||||| | ||||||| | || ||||| |||||||||| |||| |||||||| |||| |||||||||||| ||||    
T  1318387 ctgtttgaattgagtaatttgagattatctactg-cataagcacttgtgagactgtttgtgagagcttatgaaaacatctta 1318307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 1801788 - 1801739
Alignment:
Q  177 tggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||||||||||| |||| | |||||||||||||||||||||||| ||||    
T  1801788 tggcataagcacttgtgatattgtttgggagaacttatgaaaacagctta 1801739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 153 - 226
Target Start/End: Complemental strand, 3458739 - 3458666
Alignment:
Q  153 attgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||||||||||||| | | |||||||||||| |||| || | ||||  ||||||| |||||||||||||||||    
T  3458739 attgacttatttgagcttacttactggcataaacacttgtcagactgaatgggagagcttatgaaaacaactta 3458666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 272 - 337
Target Start/End: Original strand, 12464513 - 12464578
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatctt 337  Q
    |||||| ||||||||||||||| | |||||||  || ||||||||||||| |||||| ||||||||    
T  12464513 tctccaagatagcttatgaaaatagcttatagcatatacaaaaacaatttaactttattttatctt 12464578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 15370241 - 15370302
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttggga 206  Q
    ||||||| ||||||||||||||| | || |||||||||||||| | |||| |||||||||||    
T  15370241 ctgtttggattgacttatttgagcttatctactggcataagcatttgtgagactgtttggga 15370302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 28677577 - 28677658
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||||| ||||| || |||||| | ||||||| ||||||| |||  | | |||||||||||||||||||||||||| ||||    
T  28677577 ctgtttggattgatttttttgagcttatttacttgcataagtactgctaagactgtttgggagaacttatgaaaacagctta 28677658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 272 - 333
Target Start/End: Original strand, 35486403 - 35486464
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaattta 333  Q
    |||||||||||||||  ||||||| |||||||| || ||||||||| |||||||||| ||||    
T  35486403 tctccaggatagcttgcgaaaacagcttatagattatacaaaaacagtttgactttacttta 35486464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 39622067 - 39622022
Alignment:
Q  181 ataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||||||| | ||||||||||| ||||||||||||||||||||||    
T  39622067 ataagcacttgcgacactgtttgagagaacttatgaaaacaactta 39622022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 339
Target Start/End: Complemental strand, 40889528 - 40889471
Alignment:
Q  282 agcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgt 339  Q
    ||||||||||||||||||||||| || ||| ||| ||||||||||||  |||||||||    
T  40889528 agcttatgaaaacaacttatagattatacacaaataatttgactttatattatcttgt 40889471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 272 - 337
Target Start/End: Complemental strand, 41851565 - 41851500
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatctt 337  Q
    |||||| |||||||| ||||||||||||||||  || ||||||||||||| |||||| | ||||||    
T  41851565 tctccaagatagcttctgaaaacaacttatagcatatacaaaaacaatttaactttattgtatctt 41851500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 281 - 337
Target Start/End: Original strand, 43299451 - 43299508
Alignment:
Q  281 tagcttatgaaaacaacttataga-ctagacaaaaacaatttgactttaatttatctt 337  Q
    ||||||||||||||||||||||||  || ||||||||| |||||||||| ||||||||    
T  43299451 tagcttatgaaaacaacttatagatttatacaaaaacagtttgactttattttatctt 43299508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 189
Target Start/End: Complemental strand, 1830191 - 1830147
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcact 189  Q
    ||||||| ||||||||||||||||| |||||||| ||||||||||    
T  1830191 ctgtttggattgacttatttgagtttatttactgacataagcact 1830147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 303
Target Start/End: Complemental strand, 39983372 - 39983341
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatag 303  Q
    ||||||||||||||||||||||||||||||||    
T  39983372 tctccaggatagcttatgaaaacaacttatag 39983341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 5902473 - 5902548
Alignment:
Q  149 ttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||||||||||||||||  | || ||  ||||||| |||| |||| ||||||||| |||||||||||||||| ||||    
T  5902473 ttgaattgacttatttgaacttatcta--ggcataaacacttgtgagactgtttggaagaacttatgaaaacagctta 5902548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 302
Target Start/End: Complemental strand, 9477982 - 9477952
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttata 302  Q
    |||||||||||||||||||||||||||||||    
T  9477982 tctccaggatagcttatgaaaacaacttata 9477952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 366
Target Start/End: Complemental strand, 10143202 - 10143108
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggagatagtttattcataagca 366  Q
    |||||| ||||||||||||||| |||||||||  || | ||||||| |||||||| | |||||||| | |||| || |||  |||| ||||||||    
T  10143202 tctccatgatagcttatgaaaaaaacttatagcttatataaaaacagtttgacttaattttatcttttgttatagaaataacttatacataagca 10143108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 213
Target Start/End: Complemental strand, 16503503 - 16503437
Alignment:
Q  147 gtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaactta 213  Q
    |||||||||  |||||||||| | || || ||||||||| ||| |||||||||||||||||| ||||    
T  16503503 gtttgaattaccttatttgagattatctagtggcataagtacttgtgacactgtttgggagagctta 16503437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 18525160 - 18525202
Alignment:
Q  42 tgtttgaattgatttattttagcttatctactgacataaacac 84  Q
    |||||||||||| |||||| ||||||||||| |||||||||||    
T  18525160 tgtttgaattgacttatttgagcttatctacagacataaacac 18525202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 31982416 - 31982370
Alignment:
Q  180 cataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||||||||  |||||||| |||||||||||||||||||||| ||||    
T  31982416 cataagcacctgtgacactatttgggagaacttatgaaaacagctta 31982370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 365
Target Start/End: Original strand, 33931522 - 33931703
Alignment:
Q  179 gcataagcactagtgacactgtttgggagaacttatgaaaacaactta-gatatgtttaaaagtt-attttagcttatttccacaagcactccagtctcc 276  Q
    ||||||||||| ||||| ||||||||||||||  | |||| ||||||| || ||||| | ||||| |||| ||||||||||||| |         |||||    
T  33931522 gcataagcacttgtgactctgtttgggagaacaaaagaaatcaacttatgacatgttcataagtttatttcagcttatttccactatt-------tctcc 33931614  T
Q  277 aggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggagatagtttattcataagc 365  Q
    |  |||||||||||||||| |||||||  || ||||||||||| |||| ||| ||||||| || | || || |||| ||||||| ||||    
T  33931615 aaaatagcttatgaaaacagcttatagcttatacaaaaacaatctgaccttattttatctagtgtaatagaaatagcttattcacaagc 33931703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 326
Target Start/End: Complemental strand, 40158867 - 40158694
Alignment:
Q  148 tttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta-gatatgtttaaaagttattt 246  Q
    |||| |||| ||||||||||   || ||||| |||||| ||| |||| |||| ||||| ||||||||||||||| |||| || ||||||| ||||| |||    
T  40158867 tttggattggcttatttgagcatatctactgacataagaacttgtgagactgattgggggaacttatgaaaacagcttatgacatgtttataagttgttt 40158768  T
Q  247 t-agcttatttccacaagcactccagtctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactt 326  Q
    | |||||| || || ||||       ||||||| ||| |||||||||||||||||| |  || || |||||| ||||||||    
T  40158767 tcagcttaattacataagc-------tctccagaataacttatgaaaacaacttattgcttatacgaaaacagtttgactt 40158694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 151
Target Start/End: Original strand, 43529776 - 43529834
Alignment:
Q  93 ctgtttaaattgactgatttgagcttatctactggtataatcactagtgaaactgtttg 151  Q
    |||||| |||||||| ||||||||||||||| |||||||| ||||  ||| ||||||||    
T  43529776 ctgtttgaattgacttatttgagcttatctattggtataagcacttctgacactgtttg 43529834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 421
Target Start/End: Original strand, 626255 - 626400
Alignment:
Q  276 caggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggagatagtttattcataagcatttgtatga 375  Q
    |||||| |||||| |||| |||||| ||| |  |||||| || ||||||| || |||||||||| || | || |||| |||||||||| || ||  | ||    
T  626255 caggattgcttattaaaataacttagagattgtacaaaaccattttgactatattttatcttgtgttctagaaatagcttattcataaccacttacaaga 626354  T
Q  376 taagcgcttgtgctataagctacttagtaagttgtttattcaaaca 421  Q
    ||||||||  | | |||||||||  | |||||||||||| ||||||    
T  626355 taagcgctaatacaataagctacaaaataagttgtttatccaaaca 626400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 222
Target Start/End: Complemental strand, 2142806 - 2142730
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaa 222  Q
    |||||||  |||||||||||||||| || |||  |||||||   || ||| |||||||||||||||||||||||||||    
T  2142806 ctgtttggtttgacttatttgagtttatctacatgcataagtttta-tgagactgtttgggagaacttatgaaaacaa 2142730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 15120335 - 15120254
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||||| ||||||||||||||  | || |||| |||||| || | ||||  |||||||||||| |||||| ||||||||||    
T  15120335 ctgtttggattgacttatttgaacttatctactagcataaacagttgtgaatctgtttgggagagcttatggaaacaactta 15120254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 32837439 - 32837394
Alignment:
Q  181 ataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||| ||| |||| |||||||||||||||||||||||||| ||||    
T  32837439 ataagtacttgtgagactgtttgggagaacttatgaaaacagctta 32837394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 337
Target Start/End: Complemental strand, 43141897 - 43141836
Alignment:
Q  276 caggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatctt 337  Q
    |||||||||||||||||||| |||||||  || |   |||||||||||||||| ||||||||    
T  43141897 caggatagcttatgaaaacatcttatagcttatatggaaacaatttgactttactttatctt 43141836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 43259986 - 43259913
Alignment:
Q  146 tgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaa 219  Q
    |||||| |||| |||||||||  | || |||| ||||||||||| |||||| |||| |||| ||||||||||||    
T  43259986 tgtttggattggcttatttgaacttatctactagcataagcacttgtgacaatgttcgggaaaacttatgaaaa 43259913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 43530032 - 43530105
Alignment:
Q  148 tttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaaca 221  Q
    ||||| ||| |||||||||| |||| ||||  |||| ||||| |||| | || |||||||||||||||||||||    
T  43530032 tttgatttggcttatttgagctaatctactaacatatgcacttgtgagagtgcttgggagaacttatgaaaaca 43530105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 1625930 - 1625874
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgacttta 328  Q
    |||||| ||||||||||||||||||||||||   || || |||||||||| ||||||    
T  1625930 tctccaagatagcttatgaaaacaacttataacttatacgaaaacaatttaacttta 1625874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 5163384 - 5163316
Alignment:
Q  157 acttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactt 225  Q
    ||||||||||||| ||  |||| | |||||||| ||||  |||||| |||||||||| |||||||||||    
T  5163384 acttatttgagtttatcaactgacgtaagcacttgtgaagctgtttcggagaacttacgaaaacaactt 5163316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 23974412 - 23974491
Alignment:
Q  146 tgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||||| ||||||||||||| ||| || ||||| ||| || | |||||| | ||||| |||||||||||||||||| ||||    
T  23974412 tgtttggattgacttatttgggtttatctactgacatgag-attagtgagattgttttggagaacttatgaaaacagctta 23974491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 278 - 365
Target Start/End: Complemental strand, 39621975 - 39621890
Alignment:
Q  278 ggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggagatagtttattcataagc 365  Q
    ||||| |||||||||||| |||||||| || ||||||  | |||||||||| ||||| |||| |||| || |||  ||||||||||||    
T  39621975 ggataacttatgaaaacagcttatagattatacaaaa--agtttgactttattttattttgtgttatagaaatatcttattcataagc 39621890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 357
Target Start/End: Complemental strand, 40759016 - 40758968
Alignment:
Q  309 acaaaaacaatttgactttaatttatcttgttttatggagatagtttat 357  Q
    |||||||||||||||||||| |||||||| | ||||||| |||| ||||    
T  40759016 acaaaaacaatttgactttattttatcttttgttatggaaatagcttat 40758968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 137
Target Start/End: Original strand, 44438759 - 44438803
Alignment:
Q  93 ctgtttaaattgactgatttgagcttatctactggtataatcact 137  Q
    |||||| ||||||||||||||||||||||||| |  |||||||||    
T  44438759 ctgtttgaattgactgatttgagcttatctacagacataatcact 44438803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 158 - 224
Target Start/End: Original strand, 31517671 - 31517737
Alignment:
Q  158 cttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaact 224  Q
    |||||||||| | ||||||||||||||||||| |||| ||||||||||||||||||| |||||||||    
T  31517671 cttatttgagcttatttactggcataagcacttgtgagactgtttgggagaacttatcaaaacaact 31517737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 148 - 226
Target Start/End: Original strand, 18327067 - 18327145
Alignment:
Q  148 tttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||| |||| |||||||||| | || ||||| ||||||||||  ||||||| ||||| |||||||||||||||||||||    
T  18327067 tttggattggcttatttgagcttatctactgtcataagcacttttgacactatttggaagaacttatgaaaacaactta 18327145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 36070302 - 36070252
Alignment:
Q  176 ctggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||||||    
T  36070302 ctggcataagcacttgtgagactgtttaggagaacttatgaaaacaactta 36070252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 2295248 - 2295168
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||||||||||| |||||||||| | || ||||||||||||   | |||| |||||||||||||||||||||||||| ||||    
T  2295248 ctgtttgaattggcttatttgagcttatctactggcataagtttt-gtgagactgtttgggagaacttatgaaaacagctta 2295168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 272 - 357
Target Start/End: Original strand, 7218114 - 7218199
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggagatagtttat 357  Q
    |||||||||||| |||||||||||||||||||  || |  ||||||||||||||||| |||| ||| | ||||||| |||| ||||    
T  7218114 tctccaggataggttatgaaaacaacttatagcttatatgaaaacaatttgactttattttaccttttattatggaaatagattat 7218199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 37593602 - 37593683
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||||||| |||||||||||||| | || ||||||||||| |||| || | ||||||||||| |||| ||||| ||||||||    
T  37593602 ctgtttgatttgacttatttgagcttatatactggcataaacacttgttagactgtttgggaaaactaatgaacacaactta 37593683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 19390008 - 19389926
Alignment:
Q  191 gtgacactgtttgggagaacttatgaaaacaactta-gatatgtttaaaagt--tattttagcttatttccacaagcactcca 270  Q
    |||||||||||||||||||| |||||||| |||||| |||||||| | ||||  | ||||||||||||| ||||||| |||||    
T  19390008 gtgacactgtttgggagaacgtatgaaaaaaacttatgatatgttcataagttgttttttagcttattttcacaagctctcca 19389926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 10199334 - 10199400
Alignment:
Q  153 attgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaa 219  Q
    ||||||||||||||| | || ||||  |||||||||| |||||||| |||||||||||| |||||||    
T  10199334 attgacttatttgagcttatctactaacataagcacttgtgacactatttgggagaactcatgaaaa 10199400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 226
Target Start/End: Original strand, 11217943 - 11218013
Alignment:
Q  156 gacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||||||||||| |||| ||||| ||| |||||| |||| || |||||||||||||  |||||||||||||    
T  11217943 gacttatttgagctaatctactgacatgagcacttgtgagacggtttgggagaactggtgaaaacaactta 11218013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 226
Target Start/End: Original strand, 51929383 - 51929461
Alignment:
Q  148 tttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||| |||||||| |||||| | || ||||| |||||||||  ||||||||||||  ||||||||||||||||| ||||    
T  51929383 tttggattgacttttttgagcttatctactgacataagcacctgtgacactgtttaagagaacttatgaaaacagctta 51929461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 10280769 - 10280720
Alignment:
Q  177 tggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||||||||| | |||||||||||  |||||||||||||||||||||||    
T  10280769 tggcataagcaattgtgacactgttcaggagaacttatgaaaacaactta 10280720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 272 - 337
Target Start/End: Original strand, 24915091 - 24915156
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatctt 337  Q
    |||||| || |||||||||||||| |||||||  || ||||||||||||| |||||| ||||||||    
T  24915091 tctccaagacagcttatgaaaacagcttatagcatatacaaaaacaatttaactttattttatctt 24915156  T

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Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 272 - 333
Target Start/End: Original strand, 25006074 - 25006135
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaattta 333  Q
    |||||| |||||||||||||||||||||||||  || |  ||||||||||||||||| ||||    
T  25006074 tctccaagatagcttatgaaaacaacttatagcttatatgaaaacaatttgactttatttta 25006135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 272 - 337
Target Start/End: Complemental strand, 25479611 - 25479546
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatctt 337  Q
    |||| ||||||||||||||||||||||||||| ||| |  || |||||||||| ||| ||||||||    
T  25479611 tctctaggatagcttatgaaaacaacttatagcctatatgaagacaatttgacgttattttatctt 25479546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 146 - 223
Target Start/End: Original strand, 46504137 - 46504214
Alignment:
Q  146 tgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaac 223  Q
    |||| ||||||||||||||||||| || ||| |||||||| | | |||| |||||| || ||| ||||||||||||||    
T  46504137 tgttggaattgacttatttgagtttatctaccggcataagtatttgtgagactgttcggtagagcttatgaaaacaac 46504214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 146 - 221
Target Start/End: Original strand, 172492 - 172570
Alignment:
Q  146 tgtttgaattgacttatttgagttaatttactggcataagcac---tagtgacactgtttgggagaacttatgaaaaca 221  Q
    |||||| ||||||||||||||||| || |||| || |||||||   | |||||||||| |||||||| |||||||||||    
T  172492 tgtttggattgacttatttgagtttatctacttgcctaagcacttgttgtgacactgtctgggagaatttatgaaaaca 172570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 10439837 - 10439761
Alignment:
Q  146 tgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaa 222  Q
    |||||||||||||||||||||| | |||||  | ||||||  || |||| ||| ||||||||| |||||||||||||    
T  10439837 tgtttgaattgacttatttgagcttatttatggccataagatcttgtgagactatttgggagagcttatgaaaacaa 10439761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 380
Target Start/End: Complemental strand, 10854759 - 10854655
Alignment:
Q  276 caggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggagatagtttattcataagcatttgtatga 375  Q
    ||||||||  |||||||||||| |||||| || |||||| || |||||||||| |||||||||| ||   || |||  |||||||||| || || |||||    
T  10854759 caggatagtatatgaaaacaacatatagattatacaaaatcagtttgactttattttatcttgtatttcagaaataacttattcataaccacttatatga 10854660  T
Q  376 taagc 380  Q
    |||||    
T  10854659 taagc 10854655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 11211269 - 11211233
Alignment:
Q  146 tgtttgaattgacttatttgagttaatttactggcat 182  Q
    |||||||||||||||||||||| ||||||||||||||    
T  11211269 tgtttgaattgacttatttgagctaatttactggcat 11211233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 213
Target Start/End: Original strand, 12564417 - 12564485
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaactta 213  Q
    ||||||||||||||||||||||| | || |||||  ||||||||| |||  ||||||||||||| ||||    
T  12564417 ctgtttgaattgacttatttgagcttatatactgatataagcacttgtgtgactgtttgggagagctta 12564485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 17269280 - 17269224
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgacttta 328  Q
    |||||||||||||||||||||||||||||| |  || |  |||||||||||||||||    
T  17269280 tctccaggatagcttatgaaaacaacttattgcttatatgaaaacaatttgacttta 17269224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 316
Target Start/End: Original strand, 18327180 - 18327224
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaac 316  Q
    |||||||||||||||||||| |||||||||||| || ||||||||    
T  18327180 tctccaggatagcttatgaagacaacttatagattaaacaaaaac 18327224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 27976618 - 27976570
Alignment:
Q  279 gatagcttatgaaaacaacttatagactagacaaaaacaatttgacttt 327  Q
    |||||||||||||||||||||||||  || ||||||||||||| |||||    
T  27976618 gatagcttatgaaaacaacttatagcatatacaaaaacaatttaacttt 27976570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 146 - 226
Target Start/End: Complemental strand, 28467584 - 28467504
Alignment:
Q  146 tgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||||| ||||||||||||||||| ||||||| |||| ||||||  ||| ||| |||||||||  ||||| ||| ||||||    
T  28467584 tgtttggattgacttatttgagtttatttactagcattagcacttatgagactatttgggagagattatggaaataactta 28467504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 43371838 - 43371890
Alignment:
Q  174 tactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||||||||||||||| |||| |||||||| |||| |||||||||||| ||||    
T  43371838 tactggcataagcacttgtgagactgtttgagagagcttatgaaaacagctta 43371890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 14737658 - 14737725
Alignment:
Q  159 ttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||||||| | ||||||| | ||||||||| |||| ||||||||||| ||||| |||||| ||||||    
T  14737658 ttatttgagcttatttactagaataagcacttgtgagactgtttgggaaaacttgtgaaaataactta 14737725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 303
Target Start/End: Original strand, 25005837 - 25005868
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatag 303  Q
    ||||||||||||||||||||||||||||||||    
T  25005837 tctccaggatagcttatgaaaacaacttatag 25005868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 364
Target Start/End: Complemental strand, 35017606 - 35017512
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaat--ttgactttaatttatcttgttttatggagatagtttattcataag 364  Q
    ||||||||| |||||||||||||| | |||||| || || |||||| |  ||||||||| |||||||||| ||||  | |||| |||||||||||    
T  35017606 tctccaggacagcttatgaaaacagcatatagattatacgaaaacagtgtttgactttattttatcttgtattataaaaatagcttattcataag 35017512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 42757129 - 42757176
Alignment:
Q  179 gcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||||| |||| |||||||||||||| |||||||| ||||||||||||    
T  42757129 gcataaccacttgtgacactgtttggaagaacttacgaaaacaactta 42757176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 226
Target Start/End: Original strand, 50644218 - 50644253
Alignment:
Q  191 gtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||| |||||||||||||||||||||||||||||||    
T  50644218 gtgagactgtttgggagaacttatgaaaacaactta 50644253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 337
Target Start/End: Complemental strand, 51688737 - 51688670
Alignment:
Q  270 agtctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatctt 337  Q
    |||||||| ||||||||| |||||||||||||||  |  |||||||||||||  ||||| ||||||||    
T  51688737 agtctccacgatagcttacgaaaacaacttatagcatgtacaaaaacaatttatctttattttatctt 51688670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 226
Target Start/End: Original strand, 4549462 - 4549540
Alignment:
Q  148 tttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||| |||| |||||||||| | || |||||||||||||| |  ||| ||||||||||||| |||||  ||||||||||    
T  4549462 tttggattggcttatttgagattatctactggcataagcatttctgagactgtttgggagagcttatagaaacaactta 4549540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 226
Target Start/End: Complemental strand, 5741708 - 5741678
Alignment:
Q  196 actgtttgggagaacttatgaaaacaactta 226  Q
    |||||||||||||||||||||||||||||||    
T  5741708 actgtttgggagaacttatgaaaacaactta 5741678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 326
Target Start/End: Complemental strand, 7472341 - 7472287
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactt 326  Q
    |||||| ||||||||||| ||||| |||||||| || ||||||||||||| ||||    
T  7472341 tctccaagatagcttatggaaacagcttatagattatacaaaaacaatttaactt 7472287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 393
Target Start/End: Original strand, 18434565 - 18434639
Alignment:
Q  319 tttgactttaatttatcttgttttatggagatagtttattcataagcatttgtatgataagcgcttgtgctataa 393  Q
    |||||||||| |||||||| | ||||||| |||| | || || ||||| || ||||| |||||||||||||||||    
T  18434565 tttgactttattttatcttttgttatggaaataggtaatacagaagcacttatatgacaagcgcttgtgctataa 18434639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 145 - 219
Target Start/End: Complemental strand, 25719823 - 25719749
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaa 219  Q
    ||||||| ||||| ||||||||||| |||||||||| |||||| |  ||| ||| ||||||||| || |||||||    
T  25719823 ctgtttggattgatttatttgagtttatttactggcttaagcatttatgagactctttgggagagctgatgaaaa 25719749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 29793909 - 29793851
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttg 203  Q
    |||||||||||||||||||||| || ||||||  ||||||||||| |||| ||| ||||    
T  29793909 ctgtttgaattgacttatttgaatttatttaccagcataagcacttgtgagactatttg 29793851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 396
Target Start/End: Original strand, 47885130 - 47885172
Alignment:
Q  354 ttattcataagcatttgtatgataagcgcttgtgctataagct 396  Q
    ||||||||||||| || |||||||||||||| |||||||||||    
T  47885130 ttattcataagcaattatatgataagcgcttatgctataagct 47885172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 3924650 - 3924565
Alignment:
Q  276 caggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggagatagtttattcat 361  Q
    ||||||||||||| ||||||||| ||||| || || |||||| |||| ||| | |||||||||| |||| || |||| || |||||    
T  3924650 caggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctttttcat 3924565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 226
Target Start/End: Complemental strand, 4200378 - 4200305
Alignment:
Q  153 attgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||||||||||| |||| || |||||  ||||||| | |||| |||||||| |||| || ||||||||||||||    
T  4200378 attgacttattttagtttatatactgatataagcatttgtgagactgtttgtgagagctaatgaaaacaactta 4200305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 23373231 - 23373312
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||||||||||||||||||||  |  | |||||  ||||||||| |||| | ||||||||||| |||||  ||||||||||    
T  23373231 ctgtttgaattgacttatttgaacttgtctactgatataagcacttgtgagattgtttgggagagcttatagaaacaactta 23373312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 23445364 - 23445315
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaattt 321  Q
    |||||| ||||||||||||||||||||||| |  || |||||||||||||    
T  23445364 tctccaagatagcttatgaaaacaacttatggcttatacaaaaacaattt 23445315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 337
Target Start/End: Original strand, 27738228 - 27738285
Alignment:
Q  280 atagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatctt 337  Q
    ||||||||||||||||| ||||||  || |  ||||||||||||||||| ||||||||    
T  27738228 atagcttatgaaaacaaattatagcttatatgaaaacaatttgactttattttatctt 27738285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 365
Target Start/End: Complemental strand, 31624045 - 31623960
Alignment:
Q  280 atagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggagatagtttattcataagc 365  Q
    ||||||||||| ||||||||||||  || |  || ||||||||||||||||||||| ||| |||  || |||| |||||| |||||    
T  31624045 atagcttatgataacaacttatagcatatatcaatacaatttgactttaatttatcatgtgttaccgaaatagcttattcttaagc 31623960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 32515374 - 32515435
Alignment:
Q  160 tatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaaca 221  Q
    |||||||||| || ||||  |||||||||| |||| ||||||||||||| |||||| |||||    
T  32515374 tatttgagtttatctactaacataagcacttgtgagactgtttgggagagcttatggaaaca 32515435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 365
Target Start/End: Original strand, 33527187 - 33527280
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggagatagtttattcataagc 365  Q
    |||| |||||| |||||||||||| |||||||| || |  |||||| ||||||| || |||||||| | || | || |||| ||||||||||||    
T  33527187 tctcgaggataacttatgaaaacagcttatagattatatgaaaacagtttgactgtattttatcttttgttttagaaatagcttattcataagc 33527280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 337
Target Start/End: Original strand, 34179916 - 34179977
Alignment:
Q  276 caggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatctt 337  Q
    |||||||| |||||||||||  ||||||  ||||  ||||||||||||||||| ||||||||    
T  34179916 caggatagtttatgaaaacagtttatagcttagattaaaacaatttgactttattttatctt 34179977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 301
Target Start/End: Original strand, 47598461 - 47598490
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttat 301  Q
    ||||||||||||||||||||||||||||||    
T  47598461 tctccaggatagcttatgaaaacaacttat 47598490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 47884959 - 47885008
Alignment:
Q  153 attgacttatttgagttaatttactggcataagcactagtgacactgttt 202  Q
    ||||||||||||||||  || ||||||||||| |||| ||||||||||||    
T  47884959 attgacttatttgagtatatctactggcataatcactcgtgacactgttt 47885008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 4757481 - 4757409
Alignment:
Q  154 ttgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||||||||||||| | || || || ||||| |||| |||| ||  ||||| |||||||||||||||||||||    
T  4757481 ttgacttatttgagcttatctattgacataaacacttgtgagaccatttggcagaacttatgaaaacaactta 4757409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 147 - 223
Target Start/End: Complemental strand, 6659830 - 6659754
Alignment:
Q  147 gtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaac 223  Q
    ||||| |||||||||||| || | || |||| ||||||||||| |||| ||| ||||||| | ||||||| ||||||    
T  6659830 gtttggattgacttattttagcttatctactagcataagcacttgtgagactatttgggatagcttatgataacaac 6659754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 216
Target Start/End: Original strand, 7252541 - 7252609
Alignment:
Q  148 tttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatga 216  Q
    ||||||||  |||||||||| |||| ||||  |||||| ||| | || |||||||||||||||||||||    
T  7252541 tttgaattagcttatttgagctaatctactaacataagtacttgagaaactgtttgggagaacttatga 7252609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 29793619 - 29793659
Alignment:
Q  44 tttgaattgatttattttagcttatctactgacataaacac 84  Q
    |||| ||||| |||||| |||||||||||||||||||||||    
T  29793619 tttgtattgacttatttgagcttatctactgacataaacac 29793659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 281 - 337
Target Start/End: Complemental strand, 49517091 - 49517035
Alignment:
Q  281 tagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatctt 337  Q
    ||||||||||||||| |||||||  || |  ||||||||||||||||| ||||||||    
T  49517091 tagcttatgaaaacagcttatagcttaaatgaaaacaatttgactttattttatctt 49517035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 8e-16; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 272 - 363
Target Start/End: Original strand, 18857440 - 18857531
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggagatagtttattcataa 363  Q
    |||||| || |||||||||||||| |||||||| || | |||||||||||||||||| |||||| ||| |||| || |||| ||||||||||    
T  18857440 tctccaagacagcttatgaaaacagcttatagattatagaaaaacaatttgactttattttatcgtgtgttattgaaatagcttattcataa 18857531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 145 - 256
Target Start/End: Original strand, 41535022 - 41535134
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta-gatatgtttaaaagtta 243  Q
    |||||||||||| |||||||||| | || ||||| |||||||||| |||||||||||||||  ||||| |||||| | |||| ||  || | |||||||     
T  41535022 ctgtttgaattggcttatttgagctcatctactgccataagcacttgtgacactgtttgggttaacttgtgaaaagagcttatgacgtggtcaaaagttt 41535121  T
Q  244 ttttagcttattt 256  Q
    |||||||||||||    
T  41535122 ttttagcttattt 41535134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 272 - 367
Target Start/End: Complemental strand, 17368706 - 17368611
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggagatagtttattcataagcat 367  Q
    |||||| |||||||||||||||||||||||||| || ||||||||| |||||||| | || ||  ||| |||| || |||| |||||| |||||||    
T  17368706 tctccaagatagcttatgaaaacaacttatagattacacaaaaacagtttgacttcatttaatactgtgttattgaaatagcttattcctaagcat 17368611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 148 - 226
Target Start/End: Complemental strand, 32849327 - 32849249
Alignment:
Q  148 tttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||||||||||||||| || | || ||||  |||||||||| ||||  ||||||||||||||||||||||| ||||||    
T  32849327 tttgaattgacttatttaagcttatctactatcataagcacttgtgaggctgtttgggagaacttatgaaaaaaactta 32849249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 4619856 - 4619780
Alignment:
Q  148 tttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaact 224  Q
    |||| |||| |||||||| ||| |||| ||| |||||||||| |  ||||||||||||||| |||||||||||||||    
T  4619856 tttggattggcttatttgtgtttatttgctgacataagcacttgcaacactgtttgggagagcttatgaaaacaact 4619780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 395
Target Start/End: Complemental strand, 32172676 - 32172560
Alignment:
Q  279 gatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggagatagtttattcataagcatttgtatgataa 378  Q
    ||||||||||||||||| |||||||  || |   |||||| ||||||| | |||||||| | || | || ||||||||| |||||||  |||||||||||    
T  32172676 gatagcttatgaaaacagcttatagcttatatgtaaacaacttgacttcattttatcttttgttgtagaaatagtttatacataagctcttgtatgataa 32172577  T
Q  379 gcgcttgtgctataagc 395  Q
    |||||| |||| |||||    
T  32172576 gcgcttatgctgtaagc 32172560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 146 - 259
Target Start/End: Original strand, 499650 - 499765
Alignment:
Q  146 tgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta-gatatgtttaaaagttat 244  Q
    |||||| ||||||||||||||| | |  ||||| |||||||||  || |  ||||||||||||||||||||||||| |||| || ||||| | ||||| |    
T  499650 tgtttggattgacttatttgagcttacctactgacataagcacctgttaggctgtttgggagaacttatgaaaacagcttatgacatgttaacaagttgt 499749  T
Q  245 ttt-agcttatttcca 259  Q
    ||| ||||||||||||    
T  499750 tttcagcttatttcca 499765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 1084065 - 1084120
Alignment:
Q  153 attgacttatttgagttaatttactggcataagcactagtgacactgtttgggaga 208  Q
    ||||||||||||||||| |||||||| |||||||||| |||| |||||||| ||||    
T  1084065 attgacttatttgagtttatttactgacataagcacttgtgaaactgtttgagaga 1084120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 272 - 337
Target Start/End: Original strand, 10272471 - 10272536
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatctt 337  Q
    |||||| ||| |||||||||||||||||||||  || || ||||||||||||||| | ||||||||    
T  10272471 tctccaagatggcttatgaaaacaacttatagcttatacgaaaacaatttgacttaattttatctt 10272536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 12459919 - 12460000
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||||| ||||||||||||  | | || | ||| |||||||||  |||| ||||||||||||||| |||||||||||||||    
T  12459919 ctgtttggattgacttatttcggcttatctgctgacataagcacctgtgagactgtttgggagaacctatgaaaacaactta 12460000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 222
Target Start/End: Original strand, 25720335 - 25720412
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaa 222  Q
    |||||||||||  |||||||||| | || |||||||||||||||| |||| ||||| || |||| ||||| |||||||    
T  25720335 ctgtttgaattagcttatttgaggttatctactggcataagcacttgtgagactgtctgagagagcttataaaaacaa 25720412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 148 - 213
Target Start/End: Complemental strand, 40731630 - 40731565
Alignment:
Q  148 tttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaactta 213  Q
    |||| |||||||||||| |||| |||||||||||| || ||| |||||| ||||||| ||||||||    
T  40731630 tttgcattgacttatttaagtttatttactggcatcagaacttgtgacaatgtttggaagaactta 40731565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 28578997 - 28578953
Alignment:
Q  41 ttgtttgaattgatttattttagcttatctactgacataaacacc 85  Q
    ||||||||||||| |||||| |||||||||||||||| |||||||    
T  28578997 ttgtttgaattgacttatttgagcttatctactgacaaaaacacc 28578953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 335
Target Start/End: Complemental strand, 34205262 - 34205206
Alignment:
Q  279 gatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatc 335  Q
    |||||||||||||||||||||||||  || | ||||| |||||||||||| ||||||    
T  34205262 gatagcttatgaaaacaacttatagcttatataaaaataatttgactttactttatc 34205206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 327
Target Start/End: Complemental strand, 2568802 - 2568632
Alignment:
Q  153 attgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta-gatatgtttaaaagttatttt-agc 250  Q
    |||| |||||||||| | || ||||||  |||||||| | || ||||||| | |||||||||||||||| |||| || || || | |||||||||| |||    
T  2568802 attgtcttatttgagcttatctactggtgtaagcacttgagagactgtttagaagaacttatgaaaacagcttatgacatattcataagttatttttagc 2568703  T
Q  251 ttatttccacaagcactccagtctccaggatagcttatgaaaacaacttatagactagac-aaaaacaatttgacttt 327  Q
    |||||| ||  |||       |||||| |||||||||||||||||||||||||  || || ||||||||||| |||||    
T  2568702 ttattttcattagc-------tctccatgatagcttatgaaaacaacttatagcttatacgaaaaacaatttaacttt 2568632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 6593434 - 6593375
Alignment:
Q  162 tttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaaca 221  Q
    |||||||||||| |||||||| | |||| |||| ||| |||||||||| |||||||||||    
T  6593434 tttgagttaattcactggcatgaacacttgtgagactatttgggagaatttatgaaaaca 6593375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 146 - 221
Target Start/End: Complemental strand, 11105056 - 11104981
Alignment:
Q  146 tgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaaca 221  Q
    |||||| ||||| ||||||||| | ||  ||  ||||||||||| |||| ||| ||||||||||||||||||||||    
T  11105056 tgtttggattgatttatttgagcttatcaaccagcataagcacttgtgatactatttgggagaacttatgaaaaca 11104981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 12074364 - 12074427
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggaga 208  Q
    ||||||| ||||||||||||||||| ||||| ||||  ||| ||| |||| |||||||||||||    
T  12074364 ctgtttggattgacttatttgagtttatttaatggctcaagtacttgtgagactgtttgggaga 12074427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 331
Target Start/End: Complemental strand, 17652283 - 17652232
Alignment:
Q  280 atagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatt 331  Q
    ||||||||||||||||||||||||  || |||||| |||||| |||||||||    
T  17652283 atagcttatgaaaacaacttatagtatatacaaaagcaatttaactttaatt 17652232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 226
Target Start/End: Complemental strand, 26516557 - 26516478
Alignment:
Q  147 gtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||||||||  |||||||||||| ||||||||||||||||||  |||  | |||||  |||| |||||||||||| ||||    
T  26516557 gtttgaattagcttatttgagtttatttactggcataagcacctgtgggaatgtttaagagagcttatgaaaacagctta 26516478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 384
Target Start/End: Original strand, 35095864 - 35095935
Alignment:
Q  313 aaacaatttgactttaatttatcttgttttatggagatagtttattcataagcatttgtatgataagcgctt 384  Q
    |||||||||||||||| |||||||| | |||| || ||||||||   ||||||| || ||||||||||||||    
T  35095864 aaacaatttgactttattttatcttttgttatagaaatagtttaaatataagcacttatatgataagcgctt 35095935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 394
Target Start/End: Original strand, 37063161 - 37063236
Alignment:
Q  319 tttgactttaatttatcttgttttatggagatagtttattcataagcatttgtatgataagcgcttgtgctataag 394  Q
    |||||||||| |||||||| | |||| || ||||||||| ||||||||||| ||||| ||||  || |||||||||    
T  37063161 tttgactttattttatcttttgttatagaaatagtttatacataagcatttatatgacaagcatttatgctataag 37063236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 38033947 - 38034026
Alignment:
Q  147 gtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||| |||||||||||||||| |  | |||||||||||||||  |||| ||||||||| |||| |||| |||||| ||||    
T  38033947 gtttaaattgacttatttgagcttttctactggcataagcacctgtgagactgtttggaagaagttattaaaacagctta 38034026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 215
Target Start/End: Original strand, 38035988 - 38036047
Alignment:
Q  156 gacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatg 215  Q
    |||||||||||| | ||||  |||||||| |||| |||| ||||||||||||||||||||    
T  38035988 gacttatttgaggttatttgttggcataaacacttgtgaaactgtttgggagaacttatg 38036047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 378
Target Start/End: Complemental strand, 4620215 - 4620117
Alignment:
Q  280 atagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggagatagtttattcataagcatttgtatgataa 378  Q
    |||||||||||||||| |||||||  ||  ||||  |||||| |||||| ||||||||||||  ||||  ||||| ||| ||||||| || ||||||||    
T  4620215 atagcttatgaaaacagcttatagcttatgcaaattcaatttcactttattttatcttgtttagtggaattagttgatttataagcacttatatgataa 4620117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 226
Target Start/End: Original strand, 12595375 - 12595449
Alignment:
Q  152 aattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||||||||||||||||||||||| || |||||  ||| |||| | ||| |||||||  ||||| ||||||||||    
T  12595375 aattgacttatttgagttaatttattgtcataaatacttgtgagattgtctgggagagattatggaaacaactta 12595449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 366
Target Start/End: Complemental strand, 16889757 - 16889671
Alignment:
Q  280 atagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggagatagtttattcataagca 366  Q
    |||||||||||||||| |||||||  |  | ||||||| |||||||| | |||||||| | ||||||| |||| |||| ||||||||    
T  16889757 atagcttatgaaaacagcttatagcttctataaaaacagtttgacttaagtttatcttttgttatggaaatagcttatacataagca 16889671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 302
Target Start/End: Original strand, 18543236 - 18543266
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttata 302  Q
    |||||||||||||||||||||||||||||||    
T  18543236 tctccaggatagcttatgaaaacaacttata 18543266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 282 - 380
Target Start/End: Complemental strand, 31694538 - 31694440
Alignment:
Q  282 agcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggagatagtttattcataagcatttgtatgataagc 380  Q
    |||||| || ||||||||||||  |  | ||||||| |||||||||| ||||| || | |||| || |||| ||||||||||||| || ||||||||||    
T  31694538 agcttaagagaacaacttatagtttgtataaaaacagtttgactttagtttatgttttgttatagacatagcttattcataagcacttatatgataagc 31694440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 337
Target Start/End: Complemental strand, 443964 - 443899
Alignment:
Q  273 ctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgacttta-atttatctt 337  Q
    ||||| ||||||||||||||||| |||||||  || ||||||||  |||||||||| |||||||||    
T  443964 ctccaagatagcttatgaaaacatcttatagcttatacaaaaactgtttgactttatatttatctt 443899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 11297114 - 11297195
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||||||||||||||||||| || | || || |||||||| |||| || | ||||||||  ||| |||||| ||||||||||    
T  11297114 ctgtttgaattgacttatttaagcttatctagtggcataaacacttgtaagactgtttgaaagagcttatggaaacaactta 11297195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 337
Target Start/End: Complemental strand, 14295536 - 14295471
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatctt 337  Q
    |||||||||||||||| ||||||| |||||||  || |  |||||| |||||||||| ||||||||    
T  14295536 tctccaggatagcttacgaaaacagcttatagcttatatgaaaacagtttgactttattttatctt 14295471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 337
Target Start/End: Original strand, 38047895 - 38047960
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatctt 337  Q
    |||||||||||||||||||||||| | |||||  || |  |||| |||||||||||| ||||||||    
T  38047895 tctccaggatagcttatgaaaacagcatatagtatatatgaaaataatttgactttattttatctt 38047960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 40534338 - 40534281
Alignment:
Q  158 cttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatg 215  Q
    |||||||||||| |||||||| ||||| |||| |||| ||||||| ||||| ||||||    
T  40534338 cttatttgagtttatttactgacataaacacttgtgatactgtttaggagagcttatg 40534281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 41831004 - 41830923
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||||| |||||||||||||||||  | ||||| ||||| ||   |||| |||||||||||||||||   |||||||||||    
T  41831004 ctgtttggattgacttatttgagtttgtgtactgtcataaacatctgtgagactgtttgggagaacttgcaaaaacaactta 41830923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 376
Target Start/End: Original strand, 1019524 - 1019588
Alignment:
Q  312 aaaacaatttgactttaatttatcttgttttatggagatagtttattcataagcatttgtatgat 376  Q
    |||||| |||||||||| |||||||| | ||||  | ||||||||| ||||||||||| ||||||    
T  1019524 aaaacagtttgactttagtttatcttttgttattaaaatagtttatgcataagcatttatatgat 1019588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 6715839 - 6715887
Alignment:
Q  115 gcttatctactggtataatcactagtgaaactgtttgaattgacttatt 163  Q
    |||||||||||||||||||||||  ||| |||||||| ||| |||||||    
T  6715839 gcttatctactggtataatcacttttgagactgtttggattaacttatt 6715887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 170 - 226
Target Start/End: Complemental strand, 10907505 - 10907449
Alignment:
Q  170 aatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||||| |||||| | |||| |||| ||||||||| ||| |||||||||||||||||    
T  10907505 aatttattggcatgaacacttgtgagactgtttggaagagcttatgaaaacaactta 10907449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 395
Target Start/End: Complemental strand, 11457111 - 11457030
Alignment:
Q  312 aaaacaatttgactttaatttatcttgttttatggagatagtttattcataagcatttgtatgataagcgcttgtgctataagc 395  Q
    ||||||||||||||||| | ||||||   ||||  ||| || |||| ||||| |||||||||||||||| ||| ||||||||||    
T  11457111 aaaacaatttgactttattatatctttcgttat--agaaagcttatacataaacatttgtatgataagcacttatgctataagc 11457030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 13244482 - 13244550
Alignment:
Q  158 cttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||||||||||| || || ||  |||| ||||  ||||||||||||| ||| |||||||||||||||||    
T  13244482 cttatttgagtttatctattgaaataaacacttatgacactgtttggaagagcttatgaaaacaactta 13244550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 14980651 - 14980587
Alignment:
Q  155 tgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaa 219  Q
    ||||||||||||| | || |||||||||||||||||  || |||||||| |||| ||||| ||||    
T  14980651 tgacttatttgagcttatctactggcataagcactatagagactgtttgagagagcttataaaaa 14980587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 376
Target Start/End: Complemental strand, 36646230 - 36646166
Alignment:
Q  312 aaaacaatttgactttaatttatcttgttttatggagatagtttattcataagcatttgtatgat 376  Q
    |||||| |||||||||| |||||||| | ||||  | ||||||||| ||||||||||| ||||||    
T  36646230 aaaacagtttgactttagtttatcttatgttataaaaatagtttatgcataagcatttatatgat 36646166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 38033947 - 38034003
Alignment:
Q  95 gtttaaattgactgatttgagcttatctactggtataatcactagtgaaactgtttg 151  Q
    ||||||||||||| |||||||||| |||||||| |||| |||  |||| ||||||||    
T  38033947 gtttaaattgacttatttgagcttttctactggcataagcacctgtgagactgtttg 38034003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 272 - 300
Target Start/End: Original strand, 40205114 - 40205142
Alignment:
Q  272 tctccaggatagcttatgaaaacaactta 300  Q
    |||||||||||||||||||||||||||||    
T  40205114 tctccaggatagcttatgaaaacaactta 40205142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 11253653 - 11253572
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||||||||||||||||||||| | || |||| ||||||||||| | || ||||||||| |||| |||| |||||||||||    
T  11253653 ctgtttgaattgacttatttgagattatctactagcataagcacttgagagactgtttggcagaatttataaaaacaactta 11253572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 272 - 337
Target Start/End: Original strand, 30956666 - 30956731
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatctt 337  Q
    |||||| |||||||| |||||||||||||||| ||| ||||||||||||| |||||| ||||||||    
T  30956666 tctccaagatagcttttgaaaacaacttatagcctatacaaaaacaatttaactttattttatctt 30956731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 272 - 337
Target Start/End: Original strand, 30972478 - 30972543
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatctt 337  Q
    |||||| |||||||| |||||||||||||||| ||| ||||||||||||| |||||| ||||||||    
T  30972478 tctccaagatagcttttgaaaacaacttatagcctatacaaaaacaatttaactttattttatctt 30972543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 155 - 221
Target Start/End: Original strand, 46434541 - 46434607
Alignment:
Q  155 tgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaaca 221  Q
    ||||||||| ||| | ||||||| ||||||||| | ||||||||||||||||||||||| |||||||    
T  46434541 tgacttattcgagctcatttactagcataagcaattgtgacactgtttgggagaacttacgaaaaca 46434607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 148 - 226
Target Start/End: Original strand, 49465586 - 49465664
Alignment:
Q  148 tttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||| |||||||||||| |||| |||||||  |||||||||| |||| | ||||| |||||||||||||||||| ||||    
T  49465586 tttggattgacttatttcagtttatttactaccataagcacttgtgatattgtttcggagaacttatgaaaacagctta 49465664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 272 - 337
Target Start/End: Complemental strand, 1816613 - 1816548
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatctt 337  Q
    ||||||| |||||||||||||||||||||||   || ||||||||| |||||||||| ||||||||    
T  1816613 tctccagtatagcttatgaaaacaacttatatcttatacaaaaacagtttgactttattttatctt 1816548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 35903085 - 35903158
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaa 218  Q
    ||||||||||||||||||||||||| ||  |||  ||||||||||  |||||||||||  ||||||||||||||    
T  35903085 ctgtttgaattgacttatttgagttcatcaactaacataagcacttatgacactgtttcagagaacttatgaaa 35903158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 36189780 - 36189711
Alignment:
Q  146 tgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatg 215  Q
    |||||||||||||||||||||| | ||||||| | ||||||||| |||| |||||||||  |||||||||    
T  36189780 tgtttgaattgacttatttgagcttatttactagtataagcacttgtgagactgtttggaggaacttatg 36189711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 44014716 - 44014797
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||||| |||| |||||||||||| || |||| |||||| |||| |||| |||||||| || |||||||||||||| ||||    
T  44014716 ctgtttggattggcttatttgagtttatctactagcataaacacttgtgagactgtttgagaaaacttatgaaaacagctta 44014797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 47903998 - 47904079
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||||| ||||||||||||||||| ||   |||  |||||| |  ||||||||||||||||||||||||||||||| ||||    
T  47903998 ctgtttggattgacttatttgagtttatcctctgatataagctcctgtgacactgtttgggagaacttatgaaaacagctta 47904079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 272 - 339
Target Start/End: Complemental strand, 24785235 - 24785168
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgt 339  Q
    |||| |||||||||||||||||||  ||||||| || |||||||||  ||||||||| ||||||||||    
T  24785235 tctcgaggatagcttatgaaaacacgttatagattatacaaaaacagattgactttattttatcttgt 24785168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 226
Target Start/End: Original strand, 45264287 - 45264364
Alignment:
Q  148 tttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||||||| |||||||||| ||| |||||| ||||||   |||||| |||| ||| ||||||||||||||||||||||    
T  45264287 tttgaattggcttatttgagataacttactgacataagtt-tagtgagactggttgagagaacttatgaaaacaactta 45264364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 146 - 216
Target Start/End: Complemental strand, 45590802 - 45590732
Alignment:
Q  146 tgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatga 216  Q
    ||||||||||||||| |||||  | || |||| ||||||||||| |||| ||||||||||||| |||||||    
T  45590802 tgtttgaattgacttttttgaacttatctactagcataagcacttgtgagactgtttgggagagcttatga 45590732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 8007579 - 8007624
Alignment:
Q  36 tgacattgtttgaattgatttattttagcttatctactgacataaa 81  Q
    |||||||||||| ||||| ||||||||||||||||||| |||||||    
T  8007579 tgacattgtttggattgacttattttagcttatctacttacataaa 8007624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 153 - 226
Target Start/End: Complemental strand, 24281191 - 24281118
Alignment:
Q  153 attgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||||||||||||||  || |||||| ||||||||| |||  | |||||| |||| |||||||||||||||||    
T  24281191 attgacttatttgagtctatctactggtataagcacttgtgtgattgtttgagagagcttatgaaaacaactta 24281118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 280 - 337
Target Start/End: Complemental strand, 37788882 - 37788825
Alignment:
Q  280 atagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatctt 337  Q
    ||||||||||||||||||||||||| || || |||| |||| ||||||| ||||||||    
T  37788882 atagcttatgaaaacaacttatagattatacgaaaataattggactttattttatctt 37788825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 45541723 - 45541642
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||||| ||||||||||||||| | ||||| ||| |||| |||| || | ||||||| | |||||||||||||||| ||||    
T  45541723 ctgtttggattgacttatttgagcttatttaatggtataaacacttgtaagactgtttagaagaacttatgaaaacagctta 45541642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 3776317 - 3776389
Alignment:
Q  154 ttgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||||| |||||||| || |||||||||||| | | |||| | |||||| ||||||||||||||||| ||||    
T  3776317 ttgacttgtttgagtttatctactggcataagtaattgtgagaatgtttgagagaacttatgaaaacagctta 3776389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 21367697 - 21367641
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgacttta 328  Q
    |||||| |||||||||||||||||||||||| | || || |||||||||| ||||||    
T  21367697 tctccaagatagcttatgaaaacaacttatacattatacgaaaacaatttaacttta 21367641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 37273273 - 37273205
Alignment:
Q  158 cttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||||||||  | ||||| | ||||||||||| |||| ||||||||||||| |||||| ||||||||||    
T  37273273 cttatttgaacttatttattagcataagcactggtgagactgtttgggagagcttatggaaacaactta 37273205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 41644375 - 41644443
Alignment:
Q  157 acttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactt 225  Q
    |||| |||||| | || |||| ||||||||||| | |||||||||| ||||||||||| ||||||||||    
T  41644375 acttctttgagcttatctactagcataagcacttgagacactgtttaggagaacttataaaaacaactt 41644443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 221
Target Start/End: Complemental strand, 43948806 - 43948730
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaaca 221  Q
    ||||||| |||| || |||||||||||| || || |||||||| | |||| ||||| ||||||||| ||||||||||    
T  43948806 ctgtttggattggctaatttgagttaatctattgtcataagcatttgtgagactgtatgggagaacatatgaaaaca 43948730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 146 - 226
Target Start/End: Complemental strand, 50211886 - 50211806
Alignment:
Q  146 tgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||||| ||| |||||||| || | || ||||  |||||||||| || | |||||||| ||||||||||||||||||||||    
T  50211886 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactgtttgagagaacttatgaaaacaactta 50211806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 337
Target Start/End: Complemental strand, 14145940 - 14145877
Alignment:
Q  274 tccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatctt 337  Q
    |||| ||||||||||||||| |||||||||  || || |||||||||| |||||| ||||||||    
T  14145940 tccaagatagcttatgaaaataacttatagcatatacgaaaacaatttaactttattttatctt 14145877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 315
Target Start/End: Complemental strand, 22203460 - 22203417
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaa 315  Q
    |||||| |||||||||||||||||||||||||| || |||||||    
T  22203460 tctccaagatagcttatgaaaacaacttatagattatacaaaaa 22203417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 219
Target Start/End: Complemental strand, 41057304 - 41057233
Alignment:
Q  148 tttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaa 219  Q
    ||||||||| |||||||||| | || |||  ||||||||||| |||| |||||||||||||| || ||||||    
T  41057304 tttgaattggcttatttgagcttatctacatgcataagcacttgtgagactgtttgggagaatttgtgaaaa 41057233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 48286729 - 48286772
Alignment:
Q  42 tgtttgaattgatttattttagcttatctactgacataaacacc 85  Q
    ||||||||||||||||||| ||||||||||| |||| |||||||    
T  48286729 tgtttgaattgatttatttgagcttatctacggacaaaaacacc 48286772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 282 - 337
Target Start/End: Complemental strand, 48397666 - 48397611
Alignment:
Q  282 agcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatctt 337  Q
    |||| |||||||||||||||||  || | |||||||||||||||||| ||||||||    
T  48397666 agctaatgaaaacaacttatagcttaaataaaaacaatttgactttattttatctt 48397611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 220
Target Start/End: Complemental strand, 50760735 - 50760668
Alignment:
Q  153 attgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaac 220  Q
    ||||||||||||||| | || |||  ||||||||||| ||||||| | ||| ||||||||||||||||    
T  50760735 attgacttatttgagctcatctacaagcataagcacttgtgacaccgcttgagagaacttatgaaaac 50760668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 145 - 227
Target Start/End: Complemental strand, 21271112 - 21271030
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaacttag 227  Q
    |||||||  |||||||||||||||| || |||||  ||| ||||| |||||| ||||||  ||||| | ||||||||||||||    
T  21271112 ctgtttgggttgacttatttgagtttatatactgctatatgcacttgtgacattgtttgaaagaacctgtgaaaacaacttag 21271030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 336
Target Start/End: Original strand, 21872313 - 21872375
Alignment:
Q  274 tccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatct 336  Q
    ||||||||||||||||||||||||||||||  || |  |||| |||||||| ||| |||||||    
T  21872313 tccaggatagcttatgaaaacaacttatagcttatatcaaaaaaatttgaccttattttatct 21872375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 80
Target Start/End: Complemental strand, 30657437 - 30657399
Alignment:
Q  42 tgtttgaattgatttattttagcttatctactgacataa 80  Q
    ||||||||||||||||||| || ||||||||||||||||    
T  30657437 tgtttgaattgatttatttgagtttatctactgacataa 30657399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 335
Target Start/End: Original strand, 3467438 - 3467491
Alignment:
Q  282 agcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatc 335  Q
    |||||| ||||||||||||||| ||| |  ||||||||||||||||| ||||||    
T  3467438 agcttacgaaaacaacttatagtctatatgaaaacaatttgactttattttatc 3467491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 337
Target Start/End: Complemental strand, 23315648 - 23315591
Alignment:
Q  280 atagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatctt 337  Q
    |||||||||| ||||| ||||||| ||| |  ||||||||||||||||| ||||||||    
T  23315648 atagcttatggaaacatcttatagcctatatgaaaacaatttgactttattttatctt 23315591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 27795947 - 27795988
Alignment:
Q  109 atttgagcttatctactggtataatcactagtgaaactgttt 150  Q
    ||||||||||||||||||| |||| |||| ||||||||||||    
T  27795947 atttgagcttatctactggcataagcacttgtgaaactgttt 27795988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 222
Target Start/End: Original strand, 30573833 - 30573909
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaa 222  Q
    ||||||| || |||||||||||| || | ||||| |||||||||| ||||   |||||| ||||||||||||||||||    
T  30573833 ctgtttggatggacttatttgagcta-tctactgacataagcacttgtgagtttgtttgtgagaacttatgaaaacaa 30573909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 36189780 - 36189723
Alignment:
Q  94 tgtttaaattgactgatttgagcttatctactggtataatcactagtgaaactgtttg 151  Q
    ||||| |||||||| |||||||||||| |||| |||||| |||| |||| ||||||||    
T  36189780 tgtttgaattgacttatttgagcttatttactagtataagcacttgtgagactgtttg 36189723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 43875788 - 43875743
Alignment:
Q  159 ttatttgagttaatttactggcataagcactagtgacactgtttgg 204  Q
    ||||||||||| |||||||||||||||| || |||| |||||||||    
T  43875788 ttatttgagtttatttactggcataagctcttgtgagactgtttgg 43875743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 3775770 - 3775850
Alignment:
Q  146 tgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||||| |||| |||||||||||| || ||||||||||| || | || | ||||||||| ||| |||||  ||||||||||    
T  3775770 tgtttggattgccttatttgagtttatctactggcataaacaattgttagactgtttggcagagcttatagaaacaactta 3775850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 271 - 303
Target Start/End: Original strand, 22214698 - 22214730
Alignment:
Q  271 gtctccaggatagcttatgaaaacaacttatag 303  Q
    ||||| |||||||||||||||||||||||||||    
T  22214698 gtctctaggatagcttatgaaaacaacttatag 22214730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 145 - 189
Target Start/End: Complemental strand, 30657438 - 30657394
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcact 189  Q
    ||||||||||||| ||||||||||| || ||||| ||||||||||    
T  30657438 ctgtttgaattgatttatttgagtttatctactgacataagcact 30657394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 34958310 - 34958266
Alignment:
Q  320 ttgactttaatttatcttgttttatggagatagtttattcataag 364  Q
    ||||||||| |||||||||| |||| || ||||||||||||||||    
T  34958310 ttgactttattttatcttgtgttatagaaatagtttattcataag 34958266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 145 - 225
Target Start/End: Original strand, 42747700 - 42747779
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactt 225  Q
    |||||||  |||||||||||||||| || ||||  |||||| | | |||| |||||||  |||||||||||||||||||||    
T  42747700 ctgtttggtttgacttatttgagtttatctacttccataagtatt-gtgagactgtttttgagaacttatgaaaacaactt 42747779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 380
Target Start/End: Original strand, 44374724 - 44374792
Alignment:
Q  312 aaaacaatttgactttaatttatcttgttttatggagatagtttattcataagcatttgtatgataagc 380  Q
    ||||||||||||||||| |||||||| | |||  || |||| |||| |||||||| || ||||||||||    
T  44374724 aaaacaatttgactttattttatcttttgttaaagatatagcttatacataagcacttatatgataagc 44374792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 279 - 395
Target Start/End: Complemental strand, 27599 - 27483
Alignment:
Q  279 gatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggagatagtttattcataagcatttgtatgataa 378  Q
    ||||| |||||||||||||||||||  || |  ||||||||||||||||| |||||||| | |||| || |||  |||| |||||||| ||  |||||||    
T  27599 gatagtttatgaaaacaacttatagtttatatgaaaacaatttgactttattttatcttctgttatagaaataacttatacataagcacttacatgataa 27500  T
Q  379 gcgcttgtgctataagc 395  Q
    | |||| ||||||||||    
T  27499 gagcttatgctataagc 27483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 186 - 365
Target Start/End: Complemental strand, 1137823 - 1137649
Alignment:
Q  186 cactagtgacactgtttgggagaacttatgaaaacaactta-gatatgtttaaaagttatttt-agcttatttccacaagcactccagtctccaggatag 283  Q
    |||| |||||||||||| |||||||||||||||||| |||| || ||||| | ||||| |||| || ||||||||| ||||       ||||  ||||||    
T  1137823 cacttgtgacactgtttaggagaacttatgaaaacatcttatgacatgttcataagttgttttcagtttatttccataagc-------tctcttggatag 1137731  T
Q  284 cttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggagatagtttattcataagc 365  Q
     |||||||| || |||||||| ||  |||||| ||| |||||||| ||||| | || |||| || |||||||||||||||||    
T  1137730 tttatgaaagcagcttatagattattcaaaaataatatgactttattttatatggtattatagaaatagtttattcataagc 1137649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 272 - 394
Target Start/End: Complemental strand, 3891605 - 3891485
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggagatagtttattcataagcatttgt 371  Q
    |||| |||||||||||| ||||||||||| | | || ||||||||  || ||||||| |||||| |||| ||  || |||||||||||||||||| || |    
T  3891605 tctctaggatagcttataaaaacaacttacatattatacaaaaacggttcgactttattttatcctgttata--gaaatagtttattcataagcacttat 3891508  T
Q  372 atgataagcgcttgtgctataag 394  Q
    |||||||| |  |||||||||||    
T  3891507 atgataagtgtatgtgctataag 3891485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 272 - 366
Target Start/End: Complemental strand, 2996603 - 2996509
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggagatagtttattcataagca 366  Q
    |||||| ||||||||||||||||||||||||   || | ||||||||||||||| || |||||||| | |||| ||  ||| |||||||||||||    
T  2996603 tctccaagatagcttatgaaaacaacttataacttatataaaaacaatttgactgtattttatcttatgttatcgaagtagcttattcataagca 2996509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 7367972 - 7368053
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||||| ||||||||||||||||| || ||| ||||||| | || |||| ||||||||||||| || ||||||||| ||||    
T  7367972 ctgtttggattgacttatttgagtttatctacaggcataaacgcttgtgagactgtttgggagagctcatgaaaacagctta 7368053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 153 - 226
Target Start/End: Original strand, 18628479 - 18628552
Alignment:
Q  153 attgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||||| |||||||| | || ||||| ||||| |||| |||| ||||||||||||| |||||||||||||||||    
T  18628479 attgacgtatttgagcttatctactgacataaacacttgtgagactgtttgggagagcttatgaaaacaactta 18628552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 146 - 226
Target Start/End: Complemental strand, 6428169 - 6428089
Alignment:
Q  146 tgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||||||||||||||||||||| | || || ||| ||||||||| |||| || ||||| ||||  ||||||||||||||||    
T  6428169 tgtttgaattgacttatttgagcttatatattggtataagcacttgtgagacagtttgagagagattatgaaaacaactta 6428089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 37575855 - 37575935
Alignment:
Q  146 tgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||||| ||||||||||||||||| || | || |||||| | || |||||| |||||| ||||||||||||||| ||||||    
T  37575855 tgtttggattgacttatttgagtttatctgctagcataaactctcgtgacattgtttgagagaacttatgaaaataactta 37575935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 22471397 - 22471350
Alignment:
Q  174 tactggcataagcactagtgacactgtttgggagaacttatgaaaaca 221  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||||||    
T  22471397 tactgacataagcacttgtgagactgtttgggagaacttatgaaaaca 22471350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 22662169 - 22662281
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta-gatatgtttaaaagtta 243  Q
    ||||||| ||||||||||||||||| || ||||  ||||||||||  | ||||    |||||||||||||||||| |||||| |||||||| | ||| ||    
T  22662169 ctgtttggattgacttatttgagtttatctactaacataagcactcataacac----tgggagaacttatgaaaaaaacttatgatatgttcataagcta 22662264  T
Q  244 tttt-agcttatttcca 259  Q
    |||| ||||||||||||    
T  22662265 ttttcagcttatttcca 22662281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 80
Target Start/End: Complemental strand, 50298662 - 50298628
Alignment:
Q  46 tgaattgatttattttagcttatctactgacataa 80  Q
    |||||||||||||||||||||||||||||||||||    
T  50298662 tgaattgatttattttagcttatctactgacataa 50298628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 153 - 214
Target Start/End: Complemental strand, 1017172 - 1017111
Alignment:
Q  153 attgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttat 214  Q
    ||||||||||||||| |||| ||||| ||||| |||| |||| ||||||||| |||||||||    
T  1017172 attgacttatttgagctaatctactgacataaacacttgtgagactgtttggaagaacttat 1017111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 47399637 - 47399556
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||||||||| ||||||||||  | || |||||||||||  ||| |||| |||| ||| |||||||| |||||||||||||    
T  47399637 ctgtttgaattaacttatttgaacttatatactggcataaaaacttgtgagactgattgagagaacttgtgaaaacaactta 47399556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 52388365 - 52388296
Alignment:
Q  146 tgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatg 215  Q
    |||||| ||||||||||||||||  || |||||||||||||||  |||| | ||||||||||| ||||||    
T  52388365 tgtttggattgacttatttgagtccatctactggcataagcacatgtgaaattgtttgggagagcttatg 52388296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 3549479 - 3549547
Alignment:
Q  151 gaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaa 219  Q
    |||||| ||||||| |||| || || |||||||||||||  ||| |||||||| |||||||||||||||    
T  3549479 gaattggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 3549547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 6466094 - 6466158
Alignment:
Q  280 atagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttat 344  Q
    |||||||||| |||||||||||||| || ||||||| ||||| |||||| || ||||||| ||||    
T  6466094 atagcttatggaaacaacttatagattatacaaaaagaatttcactttatttgatcttgtgttat 6466158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 326
Target Start/End: Original strand, 20936188 - 20936323
Alignment:
Q  186 cactagtgacactgtttgggagaacttatgaaaacaactta-gatatgtttaaaagttatttt-agcttatttccacaagcactccagtctccaggatag 283  Q
    |||| |||||||||||| | | ||||||||||||||||||| |||||||| | ||| | |||| | |||||||||| || |       ||||||||||||    
T  20936188 cacttgtgacactgtttcgtaaaacttatgaaaacaacttatgatatgttcataagctgttttcaccttatttccataatc-------tctccaggatag 20936280  T
Q  284 cttatgaaaacaacttatagactagacaaaaacaatttgactt 326  Q
      |||||||||||| |||||| || | ||||||||||||||||    
T  20936281 aatatgaaaacaacctatagattatataaaaacaatttgactt 20936323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 221
Target Start/End: Complemental strand, 28615486 - 28615411
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaaca 221  Q
    ||||||| |||||||||||| |||| || |||| |||||| |||| |||| | ||||| ||||||||||||||||||    
T  28615486 ctgtttggattgacttatttaagtttatctactagcataaacacttgtgagattgttt-ggagaacttatgaaaaca 28615411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 221
Target Start/End: Complemental strand, 42866220 - 42866144
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaaca 221  Q
    ||||||| |||| ||| |||||||| |||||||||||||| |||   ||| ||| |||||||||||||||| |||||    
T  42866220 ctgtttggattggcttgtttgagtttatttactggcataaacacctttgagactctttgggagaacttatgtaaaca 42866144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 340
Target Start/End: Original strand, 2465972 - 2466027
Alignment:
Q  285 ttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgtt 340  Q
    |||||||||||||||||||  || |||||||||| |||| || |||||||||||||    
T  2465972 ttatgaaaacaacttatagcttatacaaaaacaaattgaattgaatttatcttgtt 2466027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 278 - 365
Target Start/End: Complemental strand, 18630704 - 18630617
Alignment:
Q  278 ggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggagatagtttattcataagc 365  Q
    ||||||||| ||||||||||||||||  || |  ||||| | ||||||||| |||||||| | |||| || ||||||||| |||||||    
T  18630704 ggatagcttgtgaaaacaacttatagcttatatgaaaaccaattgactttattttatcttttgttattgaaatagtttatgcataagc 18630617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 22666648 - 22666760
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta-gatatgtttaaaagtta 243  Q
    ||||||| ||||||||||||||||| || ||||  ||||||||||  | ||||    |||||||||||||||||| |||||| |||||||| | ||| ||    
T  22666648 ctgtttggattgacttatttgagtttatctactaacataagcactcataacac----tgggagaacttatgaaaaaaacttatgatatgttcataagcta 22666743  T
Q  244 tttt-agcttatttcca 259  Q
    |||| || |||||||||    
T  22666744 ttttcagtttatttcca 22666760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 145 - 187
Target Start/End: Complemental strand, 679443 - 679401
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagca 187  Q
    ||||||||||||||||||||||||| || |||||| |||||||    
T  679443 ctgtttgaattgacttatttgagtttatctactggtataagca 679401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 208
Target Start/End: Complemental strand, 2811622 - 2811560
Alignment:
Q  146 tgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggaga 208  Q
    |||||||||||||||||||||| | || |||||||||||||| |  ||| |||||||| ||||    
T  2811622 tgtttgaattgacttatttgaggttatctactggcataagcatttatgagactgtttgagaga 2811560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 326
Target Start/End: Original strand, 7694050 - 7694104
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactt 326  Q
    ||||||||||| |||||||||||| |||||||  || ||||||||| ||||||||    
T  7694050 tctccaggataacttatgaaaacagcttatagcttatacaaaaacagtttgactt 7694104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 214
Target Start/End: Original strand, 19429391 - 19429457
Alignment:
Q  148 tttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttat 214  Q
    |||| |||| |||||||||| | ||||||||| |||| |||| |||| ||||||||||||| |||||    
T  19429391 tttggattggcttatttgagcttatttactggtataaacacttgtgagactgtttgggagagcttat 19429457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 414
Target Start/End: Original strand, 22684596 - 22684698
Alignment:
Q  312 aaaacaatttgactttaatttatcttgttttatggagatagtttattcataagcatttgtatgataagcgcttgtgctataagctacttagtaagttgtt 411  Q
    ||||||||||||||||| |||| | | | |||| || |||| |||| || |||||||| |||||||||||| | || ||||||| | | | |||||||||    
T  22684596 aaaacaatttgactttattttaccgtttgttatagaaatagcttatacagaagcatttatatgataagcgcatatggtataagcaattaattaagttgtt 22684695  T
Q  412 tat 414  Q
    |||    
T  22684696 tat 22684698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 337
Target Start/End: Complemental strand, 25885882 - 25885824
Alignment:
Q  279 gatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatctt 337  Q
    |||| ||||||||||||||||||||  || || |||||||||| |||||| ||||||||    
T  25885882 gataacttatgaaaacaacttatagcttacacgaaaacaatttaactttattttatctt 25885824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 226
Target Start/End: Complemental strand, 31642342 - 31642264
Alignment:
Q  148 tttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||||||| |||||||||| | |  |||| |||||| ||   ||| ||||||||| ||||||||||||||||||||||    
T  31642342 tttgaattgtcttatttgagattacctactagcataaacaaatgtgtcactgtttgagagaacttatgaaaacaactta 31642264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 39178213 - 39178259
Alignment:
Q  174 tactggcataagcactagtgacactgtttgggagaacttatgaaaac 220  Q
    ||||| ||||| ||||  |||||||||||||||||||||||||||||    
T  39178213 tactgacataaacacttttgacactgtttgggagaacttatgaaaac 39178259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 222
Target Start/End: Complemental strand, 50746124 - 50746050
Alignment:
Q  148 tttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaa 222  Q
    |||| ||||||||||||||||| || |||| ||||||||||| |||| ||| |||| | ||  ||||||||||||    
T  50746124 tttgtattgacttatttgagtttatctacttgcataagcacttgtgagactatttgtgtgagtttatgaaaacaa 50746050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 337
Target Start/End: Original strand, 52746887 - 52746945
Alignment:
Q  279 gatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatctt 337  Q
    ||||||||||||||||| ||||| |  || ||||||||||||| |||||| ||||||||    
T  52746887 gatagcttatgaaaacagcttatggcttacacaaaaacaatttaactttattttatctt 52746945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 337
Target Start/End: Complemental strand, 10192314 - 10192249
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatctt 337  Q
    ||||||||||||||| |||||||||||||||   || |  ||||||||||||||||| | ||||||    
T  10192314 tctccaggatagcttttgaaaacaacttataacttatatgaaaacaatttgactttattctatctt 10192249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 340
Target Start/End: Original strand, 13949883 - 13949952
Alignment:
Q  271 gtctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgtt 340  Q
    ||||||||  ||||||||  |||||||||||||  || |  ||||||||||||||||| |||||||||||    
T  13949883 gtctccagagtagcttatacaaacaacttatagcttatatgaaaacaatttgactttattttatcttgtt 13949952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 337
Target Start/End: Complemental strand, 17884090 - 17884033
Alignment:
Q  280 atagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatctt 337  Q
    ||||||||||||||||||| |||   || ||||||||||||| |||||| ||||||||    
T  17884090 atagcttatgaaaacaactgataacttatacaaaaacaatttaactttattttatctt 17884033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 22236026 - 22236099
Alignment:
Q  148 tttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaaca 221  Q
    ||||||||| |||||||||||| |||||||  ||||| |||| | || ||||||||||||| | ||| ||||||    
T  22236026 tttgaattggcttatttgagttcatttactaacataaccacttgcgaaactgtttgggagagcctattaaaaca 22236099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 27123270 - 27123351
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||||| ||| ||||||||||| | ||  ||| ||||||| ||| |||| |||||||| |||| |||||| ||||||||||    
T  27123270 ctgtttggattaacttatttgagcttataaactagcataagtacttgtgagactgtttgagagagcttatggaaacaactta 27123351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 380
Target Start/End: Original strand, 50742876 - 50742982
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgactttaatttatcttgttttatggagatagtttattcataagcatttgt 371  Q
    ||||||||||||||||||||||||| ||||  | || ||||||||||  |||||| | ||||| |||| ||||  | |||| |||| |||||||  || |    
T  50742876 tctccaggatagcttatgaaaacaagttatttattatacaaaaacaa--tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttat 50742973  T
Q  372 atgataagc 380  Q
    |||||||||    
T  50742974 atgataagc 50742982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 51560207 - 51560288
Alignment:
Q  145 ctgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||||| |||||  |||| |||| | || ||||||||||||||||  ||| ||| ||||||||| |||||||||||| ||||    
T  51560207 ctgtttcaattgctttatatgagcttatctactggcataagcacttatgagactctttgggagaccttatgaaaacacctta 51560288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 395
Target Start/End: Complemental strand, 486072 - 485988
Alignment:
Q  312 aaaacaatttgactttaattt-atcttgttttatggagatagtttattcataagcatttgtatgataagcgcttgtgctataagc 395  Q
    |||||||||||||||| |||| ||||| | || | || ||||  ||| |||||||| || |||||||||||||| ||||||||||    
T  486072 aaaacaatttgacttttattttatcttttgttttagaaatagcatatacataagcacttttatgataagcgcttatgctataagc 485988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 2996712 - 2996644
Alignment:
Q  158 cttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||||||||  | ||||| || ||||||||||  ||| |||||||| |||| |||||||||||||||||    
T  2996712 cttatttgaacttatttattgacataagcacttttgagactgtttgagagagcttatgaaaacaactta 2996644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 6987660 - 6987740
Alignment:
Q  146 tgtttgaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    |||||| ||||||||| ||||||| || |||| |||||||   | |||| ||||||||||||| |||||| | ||||||||    
T  6987660 tgtttgtattgacttaattgagtttatctactagcataagtgtttgtgagactgtttgggagagcttatggatacaactta 6987740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 44 - 80
Target Start/End: Complemental strand, 20656188 - 20656152
Alignment:
Q  44 tttgaattgatttattttagcttatctactgacataa 80  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  20656188 tttgaattgatttatttgagcttatctactgtcataa 20656152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 25434441 - 25434485
Alignment:
Q  182 taagcactagtgacactgtttgggagaacttatgaaaacaactta 226  Q
    ||||||||||||| ||||||| ||||| |||||||||||| ||||    
T  25434441 taagcactagtgagactgtttaggagagcttatgaaaacagctta 25434485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 35517173 - 35517229
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttatagactagacaaaaacaatttgacttta 328  Q
    |||||||||||||||||||||||| ||| |||  || | ||||||||||||| ||||    
T  35517173 tctccaggatagcttatgaaaacatcttctagcttatataaaaacaatttgatttta 35517229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 6951 - 6891
Alignment:
Q  156 gacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatga 216  Q
    |||||||||||||| || |||| |||||| |||| |||| ||||||||||||| |||||||    
T  6951 gacttatttgagtttatctactagcataaacacttgtgagactgtttgggagagcttatga 6891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0654 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 384
Target Start/End: Original strand, 6717 - 6789
Alignment:
Q  312 aaaacaatttgactttaatttatcttgttttatggagatagtttattcataagcatttgtatgataagcgctt 384  Q
    ||||||||||||||| | ||||| || | |||| || ||||||||| |||||||| || ||||||||| ||||    
T  6717 aaaacaatttgacttaagtttattttttgttatagaaatagtttatacataagcacttatatgataagtgctt 6789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 272 - 304
Target Start/End: Complemental strand, 17306 - 17274
Alignment:
Q  272 tctccaggatagcttatgaaaacaacttataga 304  Q
    |||||| ||||||||||||||||||||||||||    
T  17306 tctccaagatagcttatgaaaacaacttataga 17274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 384
Target Start/End: Original strand, 116636 - 116708
Alignment:
Q  312 aaaacaatttgactttaatttatcttgttttatggagatagtttattcataagcatttgtatgataagcgctt 384  Q
    ||||||||||||||| | ||||| || | |||| || ||||||||| |||||||| || ||||||||| ||||    
T  116636 aaaacaatttgacttaagtttattttttgttatagaaatagtttatacataagcacttatatgataagtgctt 116708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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