View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7314_low_4 (Length: 297)

Name: NF7314_low_4
Description: NF7314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7314_low_4
NF7314_low_4
[»] chr2 (44 HSPs)
chr2 (124-297)||(28788486-28788659)
chr2 (1-117)||(12023977-12024093)
chr2 (1-117)||(9671140-9671256)
chr2 (1-117)||(23397726-23397841)
chr2 (4-117)||(10543658-10543772)
chr2 (1-117)||(21779319-21779434)
chr2 (1-117)||(8455374-8455491)
chr2 (4-117)||(24200686-24200800)
chr2 (1-117)||(11514396-11514513)
chr2 (5-117)||(14530278-14530391)
chr2 (1-117)||(17896219-17896337)
chr2 (1-117)||(25249796-25249912)
chr2 (9-117)||(5840988-5841097)
chr2 (1-117)||(19977772-19977889)
chr2 (1-114)||(99323-99434)
chr2 (1-117)||(27573581-27573697)
chr2 (1-117)||(22371017-22371131)
chr2 (33-117)||(25079810-25079893)
chr2 (8-117)||(7214494-7214604)
chr2 (1-106)||(17623535-17623641)
chr2 (1-106)||(17667973-17668079)
chr2 (34-117)||(17705455-17705537)
chr2 (3-92)||(25641487-25641576)
chr2 (4-99)||(5450263-5450360)
chr2 (33-117)||(17472931-17473014)
chr2 (1-75)||(14444730-14444805)
chr2 (1-99)||(21377131-21377230)
chr2 (5-114)||(4516413-4516522)
chr2 (1-76)||(10546162-10546240)
chr2 (33-105)||(44604826-44604897)
chr2 (1-109)||(26684678-26684789)
chr2 (33-99)||(33795263-33795328)
chr2 (33-111)||(39914398-39914475)
chr2 (36-117)||(14544023-14544103)
chr2 (2-97)||(17380296-17380391)
chr2 (46-114)||(35017781-35017848)
chr2 (1-60)||(36871509-36871569)
chr2 (81-117)||(39189560-39189596)
chr2 (31-99)||(45235908-45235975)
chr2 (75-117)||(27466263-27466305)
chr2 (33-99)||(29419981-29420046)
chr2 (33-99)||(40416963-40417028)
chr2 (1-113)||(24860046-24860157)
chr2 (1-53)||(30826060-30826113)
[»] chr8 (38 HSPs)
chr8 (1-117)||(12670308-12670423)
chr8 (5-120)||(20869560-20869674)
chr8 (1-117)||(30454155-30454270)
chr8 (1-117)||(13160662-13160778)
chr8 (1-117)||(29521743-29521860)
chr8 (1-117)||(36720756-36720873)
chr8 (1-117)||(45071225-45071341)
chr8 (1-113)||(17823540-17823653)
chr8 (1-117)||(28817684-28817801)
chr8 (5-117)||(39461058-39461171)
chr8 (5-117)||(7136591-7136704)
chr8 (1-117)||(35261639-35261756)
chr8 (1-117)||(44530109-44530226)
chr8 (4-113)||(18164821-18164930)
chr8 (5-117)||(26954092-26954206)
chr8 (33-114)||(28407379-28407459)
chr8 (33-117)||(2626479-2626562)
chr8 (5-113)||(6760786-6760895)
chr8 (5-117)||(20284133-20284248)
chr8 (5-117)||(21070761-21070877)
chr8 (1-99)||(24365117-24365217)
chr8 (5-117)||(25250482-25250595)
chr8 (33-114)||(30962865-30962944)
chr8 (49-117)||(24245411-24245478)
chr8 (1-117)||(8897822-8897939)
chr8 (1-95)||(31457155-31457249)
chr8 (4-114)||(44781567-44781677)
chr8 (33-114)||(42083791-42083870)
chr8 (1-70)||(5135347-5135418)
chr8 (6-98)||(35105902-35105995)
chr8 (2-76)||(389643-389721)
chr8 (33-114)||(14018061-14018140)
chr8 (1-50)||(23286383-23286432)
chr8 (33-117)||(11748259-11748342)
chr8 (78-117)||(40605041-40605080)
chr8 (1-108)||(12625858-12625967)
chr8 (33-99)||(22598135-22598200)
chr8 (81-117)||(23286432-23286468)
[»] chr4 (62 HSPs)
chr4 (1-117)||(48598883-48598998)
chr4 (1-117)||(20224944-20225059)
chr4 (1-117)||(47528588-47528703)
chr4 (1-117)||(5306722-5306838)
chr4 (1-117)||(5648219-5648335)
chr4 (1-117)||(6430684-6430800)
chr4 (5-123)||(16911516-16911635)
chr4 (1-117)||(11054206-11054321)
chr4 (5-120)||(21646921-21647037)
chr4 (1-117)||(30639340-30639456)
chr4 (1-96)||(39077854-39077948)
chr4 (5-116)||(16408665-16408777)
chr4 (1-117)||(14590797-14590915)
chr4 (5-117)||(54730209-54730323)
chr4 (1-104)||(40915802-40915905)
chr4 (1-76)||(9832371-9832446)
chr4 (1-72)||(10277815-10277886)
chr4 (1-97)||(17043452-17043549)
chr4 (33-117)||(17315390-17315473)
chr4 (1-113)||(30496380-30496491)
chr4 (36-99)||(12257688-12257750)
chr4 (1-76)||(29207956-29208031)
chr4 (1-123)||(14983788-14983911)
chr4 (57-117)||(23501753-23501812)
chr4 (33-117)||(30352683-30352766)
chr4 (3-94)||(41018854-41018945)
chr4 (46-117)||(5313099-5313169)
chr4 (1-112)||(8473680-8473790)
chr4 (5-117)||(10660364-10660477)
chr4 (5-117)||(10874509-10874622)
chr4 (5-96)||(19027829-19027921)
chr4 (1-76)||(47443957-47444034)
chr4 (33-117)||(37494811-37494894)
chr4 (4-114)||(54175028-54175137)
chr4 (8-117)||(55830786-55830896)
chr4 (8-99)||(487200-487292)
chr4 (33-99)||(23580300-23580365)
chr4 (1-112)||(47441588-47441699)
chr4 (33-111)||(49938682-49938759)
chr4 (49-114)||(50856344-50856407)
chr4 (1-94)||(7385534-7385628)
chr4 (33-112)||(42164240-42164317)
chr4 (33-104)||(44363224-44363294)
chr4 (3-76)||(10380003-10380077)
chr4 (5-117)||(13256463-13256572)
chr4 (4-99)||(20908698-20908795)
chr4 (33-91)||(25463108-25463165)
chr4 (33-99)||(30690275-30690340)
chr4 (81-122)||(18969696-18969737)
chr4 (1-99)||(35567148-35567247)
chr4 (33-114)||(54640431-54640510)
chr4 (4-89)||(7038041-7038126)
chr4 (4-113)||(25343152-25343261)
chr4 (35-99)||(43035226-43035289)
chr4 (33-116)||(54966983-54967064)
chr4 (8-117)||(55766531-55766641)
chr4 (1-64)||(9987892-9987957)
chr4 (33-117)||(20405053-20405129)
chr4 (33-102)||(32478877-32478945)
chr4 (39-92)||(32629366-32629418)
chr4 (33-114)||(49938530-49938610)
chr4 (81-117)||(29879636-29879672)
[»] chr7 (58 HSPs)
chr7 (1-117)||(21172067-21172182)
chr7 (1-116)||(10693131-10693245)
chr7 (1-117)||(32758221-32758336)
chr7 (1-117)||(2541077-2541195)
chr7 (1-117)||(47077913-47078028)
chr7 (1-117)||(48735180-48735296)
chr7 (5-117)||(46354154-46354267)
chr7 (1-112)||(19426947-19427059)
chr7 (1-95)||(42391158-42391251)
chr7 (1-117)||(2662993-2663106)
chr7 (1-98)||(11741774-11741870)
chr7 (1-117)||(42476833-42476948)
chr7 (1-99)||(33871968-33872066)
chr7 (1-117)||(42798629-42798746)
chr7 (5-117)||(42805484-42805597)
chr7 (5-117)||(43557432-43557545)
chr7 (1-116)||(11617646-11617762)
chr7 (1-118)||(40463836-40463953)
chr7 (1-115)||(27629596-27629711)
chr7 (1-117)||(34626266-34626382)
chr7 (33-117)||(42495927-42496010)
chr7 (5-117)||(47716419-47716532)
chr7 (33-117)||(18326994-18327077)
chr7 (1-114)||(28362203-28362316)
chr7 (34-117)||(7193045-7193127)
chr7 (46-117)||(14732927-14732997)
chr7 (1-120)||(35334874-35334992)
chr7 (1-114)||(13805066-13805178)
chr7 (4-99)||(29907395-29907493)
chr7 (33-117)||(7794598-7794681)
chr7 (1-76)||(18512511-18512587)
chr7 (1-112)||(19265781-19265891)
chr7 (33-117)||(21447550-21447633)
chr7 (4-117)||(22699031-22699145)
chr7 (1-114)||(23419732-23419845)
chr7 (4-99)||(16341256-16341352)
chr7 (1-117)||(8149003-8149121)
chr7 (37-117)||(5180253-5180332)
chr7 (1-114)||(48123542-48123655)
chr7 (47-117)||(28078237-28078306)
chr7 (4-114)||(12473267-12473378)
chr7 (1-99)||(14099064-14099163)
chr7 (1-99)||(14409081-14409180)
chr7 (2-75)||(38262255-38262330)
chr7 (5-117)||(1423972-1424085)
chr7 (33-76)||(7644956-7644999)
chr7 (9-76)||(31591175-31591242)
chr7 (33-99)||(39123868-39123933)
chr7 (33-114)||(3469271-3469350)
chr7 (1-75)||(7879639-7879715)
chr7 (1-99)||(6736868-6736966)
chr7 (3-99)||(19266428-19266525)
chr7 (4-76)||(35203439-35203513)
chr7 (1-114)||(32233193-32233305)
chr7 (33-99)||(44123713-44123778)
chr7 (58-115)||(5814433-5814489)
chr7 (11-99)||(22065566-22065654)
chr7 (1-53)||(38604550-38604603)
[»] chr6 (28 HSPs)
chr6 (1-117)||(1346924-1347039)
chr6 (1-117)||(1354815-1354930)
chr6 (5-113)||(12221979-12222088)
chr6 (2-100)||(28007603-28007702)
chr6 (5-117)||(29355919-29356033)
chr6 (5-109)||(2166474-2166579)
chr6 (5-109)||(2178107-2178212)
chr6 (1-117)||(3815135-3815252)
chr6 (33-120)||(14975172-14975258)
chr6 (10-117)||(8409203-8409311)
chr6 (33-122)||(12063422-12063510)
chr6 (33-108)||(6024202-6024276)
chr6 (9-117)||(9161083-9161191)
chr6 (4-112)||(14553477-14553585)
chr6 (41-117)||(15866137-15866212)
chr6 (49-117)||(33922936-33923003)
chr6 (1-116)||(13905037-13905152)
chr6 (13-117)||(22967131-22967235)
chr6 (13-117)||(23821158-23821262)
chr6 (33-117)||(24734593-24734676)
chr6 (2-58)||(25557743-25557799)
chr6 (2-58)||(26097178-26097234)
chr6 (75-113)||(19649300-19649338)
chr6 (33-117)||(20400627-20400710)
chr6 (1-117)||(1941815-1941932)
chr6 (5-76)||(23240886-23240957)
chr6 (31-77)||(4136607-4136653)
chr6 (33-77)||(18277285-18277329)
[»] chr5 (33 HSPs)
chr5 (1-117)||(35710273-35710388)
chr5 (1-117)||(8170042-8170157)
chr5 (1-117)||(41014279-41014395)
chr5 (1-117)||(24448850-24448967)
chr5 (13-117)||(37024626-37024729)
chr5 (5-117)||(38879541-38879654)
chr5 (4-122)||(43334157-43334277)
chr5 (1-117)||(2838738-2838855)
chr5 (5-117)||(4619168-4619281)
chr5 (1-90)||(32703411-32703499)
chr5 (33-117)||(22861758-22861841)
chr5 (5-117)||(27328712-27328825)
chr5 (1-117)||(1565391-1565509)
chr5 (4-117)||(22187245-22187359)
chr5 (33-117)||(23974741-23974823)
chr5 (39-117)||(31299592-31299669)
chr5 (5-61)||(7368413-7368469)
chr5 (1-117)||(22600414-22600531)
chr5 (1-114)||(19143001-19143113)
chr5 (1-93)||(1850624-1850716)
chr5 (4-99)||(208989-209084)
chr5 (1-76)||(22907923-22907999)
chr5 (33-97)||(34074654-34074717)
chr5 (55-106)||(9794473-9794522)
chr5 (5-112)||(12006392-12006500)
chr5 (33-76)||(22025543-22025586)
chr5 (75-122)||(30006280-30006327)
chr5 (48-114)||(10634253-10634317)
chr5 (33-99)||(28516526-28516591)
chr5 (36-114)||(39301087-39301163)
chr5 (5-67)||(13801831-13801895)
chr5 (57-114)||(39079882-39079937)
chr5 (85-117)||(19438709-19438741)
[»] chr3 (46 HSPs)
chr3 (1-117)||(7696945-7697060)
chr3 (1-117)||(1217072-1217187)
chr3 (1-117)||(22122975-22123090)
chr3 (1-117)||(39203498-39203613)
chr3 (5-117)||(8247751-8247864)
chr3 (5-117)||(46421099-46421212)
chr3 (1-117)||(16735423-16735539)
chr3 (33-117)||(10870043-10870126)
chr3 (5-117)||(13730666-13730779)
chr3 (5-117)||(29366784-29366897)
chr3 (1-117)||(40272870-40272987)
chr3 (1-110)||(26869696-26869805)
chr3 (5-117)||(13628854-13628968)
chr3 (1-117)||(52926277-52926385)
chr3 (1-117)||(22609749-22609864)
chr3 (1-117)||(4495722-4495839)
chr3 (1-117)||(12914093-12914210)
chr3 (4-114)||(34420705-34420815)
chr3 (2-117)||(6411881-6411996)
chr3 (5-114)||(26573113-26573222)
chr3 (1-69)||(31592878-31592946)
chr3 (5-117)||(9607185-9607298)
chr3 (5-114)||(45620890-45621000)
chr3 (33-117)||(5173812-5173896)
chr3 (2-123)||(26782342-26782464)
chr3 (33-97)||(30928239-30928302)
chr3 (5-114)||(45948900-45949012)
chr3 (33-91)||(516417-516474)
chr3 (4-70)||(10795486-10795554)
chr3 (1-53)||(31831244-31831296)
chr3 (81-120)||(25517312-25517351)
chr3 (1-96)||(7942993-7943089)
chr3 (33-117)||(12525392-12525472)
chr3 (37-99)||(53062038-53062099)
chr3 (33-114)||(25944455-25944534)
chr3 (33-114)||(35417902-35417981)
chr3 (3-76)||(52428537-52428613)
chr3 (1-75)||(54032617-54032693)
chr3 (5-66)||(14986989-14987052)
chr3 (1-49)||(15797271-15797319)
chr3 (6-76)||(33926105-33926176)
chr3 (4-76)||(54374407-54374481)
chr3 (33-99)||(19731002-19731067)
chr3 (4-99)||(53996627-53996723)
chr3 (81-117)||(21875002-21875038)
chr3 (1-52)||(47624088-47624140)
[»] chr1 (53 HSPs)
chr1 (1-117)||(34725156-34725271)
chr1 (1-117)||(38478340-38478455)
chr1 (1-117)||(32632615-32632731)
chr1 (1-117)||(45812595-45812710)
chr1 (3-117)||(12126897-12127010)
chr1 (1-117)||(19414422-19414537)
chr1 (1-117)||(47214494-47214609)
chr1 (5-117)||(18944626-18944739)
chr1 (5-117)||(30395790-30395903)
chr1 (1-117)||(14617021-14617138)
chr1 (1-117)||(46248011-46248128)
chr1 (33-117)||(10668203-10668291)
chr1 (3-113)||(18724605-18724715)
chr1 (1-123)||(23768378-23768501)
chr1 (33-117)||(45402078-45402160)
chr1 (33-117)||(22930159-22930242)
chr1 (5-117)||(20004154-20004267)
chr1 (1-76)||(35253245-35253320)
chr1 (1-117)||(46991787-46991904)
chr1 (47-117)||(34714606-34714675)
chr1 (2-117)||(41319865-41319981)
chr1 (4-114)||(2435848-2435958)
chr1 (1-99)||(25468321-25468420)
chr1 (4-117)||(27201630-27201744)
chr1 (1-104)||(6925096-6925200)
chr1 (4-99)||(17470407-17470503)
chr1 (4-99)||(35117829-35117925)
chr1 (1-113)||(11596501-11596612)
chr1 (1-114)||(44485167-44485280)
chr1 (8-117)||(27474264-27474373)
chr1 (4-113)||(33222971-33223080)
chr1 (55-117)||(40424725-40424786)
chr1 (33-117)||(8197026-8197109)
chr1 (1-113)||(4430084-4430197)
chr1 (34-113)||(20036208-20036285)
chr1 (33-117)||(25290146-25290231)
chr1 (2-117)||(18335347-18335463)
chr1 (1-114)||(6983869-6983980)
chr1 (60-117)||(18742080-18742136)
chr1 (58-115)||(19932869-19932925)
chr1 (33-98)||(22327101-22327165)
chr1 (39-117)||(9939443-9939521)
chr1 (4-114)||(50811926-50812037)
chr1 (33-99)||(2435985-2436050)
chr1 (1-58)||(31382272-31382330)
chr1 (5-99)||(50760288-50760383)
chr1 (82-117)||(10163742-10163777)
chr1 (33-76)||(23371147-23371190)
chr1 (1-117)||(24564327-24564444)
chr1 (4-76)||(35005146-35005220)
chr1 (35-109)||(22151495-22151568)
chr1 (33-114)||(19701557-19701636)
chr1 (4-67)||(22324925-22324989)
[»] scaffold0168 (1 HSPs)
scaffold0168 (1-117)||(30539-30654)
[»] scaffold0187 (4 HSPs)
scaffold0187 (3-122)||(10110-10228)
scaffold0187 (3-122)||(20438-20556)
scaffold0187 (57-117)||(8905-8964)
scaffold0187 (57-117)||(19233-19292)
[»] scaffold1176 (1 HSPs)
scaffold1176 (2-115)||(1646-1758)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-117)||(226463-226581)
[»] scaffold0223 (1 HSPs)
scaffold0223 (1-116)||(11093-11206)
[»] scaffold0258 (1 HSPs)
scaffold0258 (1-117)||(13082-13198)
[»] scaffold0057 (3 HSPs)
scaffold0057 (1-114)||(46794-46908)
scaffold0057 (1-117)||(24830-24942)
scaffold0057 (1-63)||(43672-43734)
[»] scaffold0254 (1 HSPs)
scaffold0254 (5-109)||(4125-4230)
[»] scaffold0049 (1 HSPs)
scaffold0049 (4-117)||(58937-59051)
[»] scaffold0031 (1 HSPs)
scaffold0031 (33-109)||(43097-43172)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-120)||(35075-35197)
[»] scaffold0024 (1 HSPs)
scaffold0024 (48-117)||(83835-83903)
[»] scaffold0194 (1 HSPs)
scaffold0194 (46-117)||(24624-24694)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-67)||(48692-48758)
[»] scaffold0311 (1 HSPs)
scaffold0311 (1-114)||(10773-10887)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-115)||(72925-73034)
[»] scaffold0116 (1 HSPs)
scaffold0116 (33-99)||(8869-8934)


Alignment Details
Target: chr2 (Bit Score: 166; Significance: 7e-89; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 124 - 297
Target Start/End: Complemental strand, 28788659 - 28788486
Alignment:
Q  124 tcttggaaagattcactaatgaacttaaattgtaatttaaagtggtgttttaatatcacgtcaattttaagcaatatatcaatatttcaatggtgcaatt 223  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28788659 tcttggaaagattcactaatgaacttaaattgtaattttaagtggtgttttaatatcacgtcaattttaagcaatatatcaatctttcaatggtgcaatt 28788560  T
Q  224 tttcagagtccaacacctttacattattacataaattatttcatttgaatattctttgtttgacttttaattta 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28788559 tttcagagtccaacacctttacattattacataaattatttcatttgaatattctttgtttgacttttaattta 28788486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 12023977 - 12024093
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    ||||||||||||||||||||||| ||| ||| |||| |||||||| |||||||| ||||||||||||||||||| ||||| |||||||||||||||||||    
T  12023977 ccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacc-tttcagtcacatgacaacaacttta 12024075  T
Q  100 tcagttgcgccaaggtta 117  Q
     |||||||||||||||||    
T  12024076 ccagttgcgccaaggtta 12024093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 9671256 - 9671140
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||| |||||||| |||| ||||||||||||| ||| || |||||||||||||||||||     
T  9671256 ccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgtttccaggatttgaacccgtgacatttccagtcacatgacaacaactttac 9671157  T
Q  101 cagttgcgccaaggtta 117  Q
    | |||||||||||||||    
T  9671156 cggttgcgccaaggtta 9671140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 23397841 - 23397726
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    ||||||||||||||||||| ||| ||| |||||||||||||||| |||||||| ||||||||||||| ||||| ||||| |||||||||||||||||||     
T  23397841 ccatttggtgtattgtacgtagccttaccctattttacacaagaggctgtttccaggacttgaacccatgacc-tttcagtcacatgacaacaactttac 23397743  T
Q  101 cagttgcgccaaggtta 117  Q
    ||||||| |||||||||    
T  23397742 cagttgcaccaaggtta 23397726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 10543772 - 10543658
Alignment:
Q  4 tttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatc 101  Q
    |||||||||||||||||||| ||| ||| ||||  |||||||| || ||||| |||||||||||||||||||||| || |||||||||||||||||||||    
T  10543772 tttggtgtattgtacgcagccttaccctgttttttacacaagaggccgtttccaggacttgaacccgtgaccttt-cagtcacatgacaacaactttatc 10543674  T
Q  102 agttgcgccaaggtta 117  Q
    ||||||||||||||||    
T  10543673 agttgcgccaaggtta 10543658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 21779319 - 21779434
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    ||||||||||||||||||||| | ||| ||| |||||||||||| ||||| || ||||||||||||||||||| ||||| ||||||||||||||||| |     
T  21779319 ccatttggtgtattgtacgcaaccttaccctgttttacacaagaggctgtctccaggacttgaacccgtgacc-tttcagtcacatgacaacaacttcac 21779417  T
Q  101 cagttgcgccaaggtta 117  Q
    |||||||||||||||||    
T  21779418 cagttgcgccaaggtta 21779434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 8455374 - 8455491
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctat--tttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||||||||||||||||||||| ||| ||| |  ||||||||||| |||||||| ||||||||||||||||||| || || ||||||||||||||||||    
T  8455374 ccatttggtgtattgtacgcagccttaccctgtgttttacacaagaggctgtttccaggacttgaacccgtgacc-ttccagtcacatgacaacaacttt 8455472  T
Q  99 atcagttgcgccaaggtta 117  Q
    | |||||||||||||||||    
T  8455473 accagttgcgccaaggtta 8455491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 24200686 - 24200800
Alignment:
Q  4 tttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatc 101  Q
    |||||||||||||||||||| ||| ||| ||||  |||||||| |||||||| ||||||||||||||||| ||||||| ||||||||||||||||||| |    
T  24200686 tttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtga-cttttcagtcacatgacaacaactttacc 24200784  T
Q  102 agttgcgccaaggtta 117  Q
    ||||||  ||||||||    
T  24200785 agttgcatcaaggtta 24200800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 11514513 - 11514396
Alignment:
Q  1 ccatttggtgtattgtacgcagcatta--tcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||||||||||||||||||||| |||  |  | |||||||||||| |||||||| |||| ||||||||||||||||  || ||||||||||||||||||    
T  11514513 ccatttggtgtattgtacgcagccttactttgttttttacacaagaggctgtttccaggagttgaacccgtgaccttc-cagtcacatgacaacaacttt 11514415  T
Q  99 atcagttgcgccaaggtta 117  Q
    | |||||||||||||||||    
T  11514414 accagttgcgccaaggtta 11514396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 14530391 - 14530278
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    ||||||||||||||| ||| ||| ||| ||||  | |||||| |||||||| |||||||||||||||||||||| || ||||||||||||||||||| ||    
T  14530391 ttggtgtattgtacgtagccttaccctgttttttatacaagaggctgtttccaggacttgaacccgtgaccttt-cagtcacatgacaacaactttacca 14530293  T
Q  103 gttgcgccaaggtta 117  Q
    |||||||||||||||    
T  14530292 gttgcgccaaggtta 14530278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 17896337 - 17896219
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt---acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactt 97  Q
    ||||||||| ||||||||||||| ||| ||||||||   |||||||| | ||||||||||||||||| |||||||| ||||  |||||||||||||||||    
T  17896337 ccatttggtatattgtacgcagccttaccctatttttttacacaagaggttgtttctaggacttgaatccgtgacc-tttcggtcacatgacaacaactt 17896239  T
Q  98 tatcagttgcgccaaggtta 117  Q
    || |||||||| ||||||||    
T  17896238 taccagttgcgtcaaggtta 17896219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 25249796 - 25249912
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattt-tacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    ||||||||||||||||||||||| ||| ||| ||| |||||||||  ||||||| | |||||||||||||||||||  || |||||||||||||||||||    
T  25249796 ccatttggtgtattgtacgcagccttaccctgtttgtacacaagagactgtttccatgacttgaacccgtgacctta-cagtcacatgacaacaacttta 25249894  T
Q  100 tcagttgcgccaaggtta 117  Q
     || ||||||||||||||    
T  25249895 ccaattgcgccaaggtta 25249912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 117
Target Start/End: Complemental strand, 5841097 - 5840988
Alignment:
Q  9 tgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttg 106  Q
    ||||||||||||| | ||| ||||||||  |||||| | |||||||||||||||||||||||||||| || || |||||||||||||||||||||| |||    
T  5841097 tgtattgtacgcatccttaccctattttttacacaaaaggctgtttctaggacttgaacccgtgacc-ttccagtcacatgacaacaactttatcatttg 5840999  T
Q  107 cgccaaggtta 117  Q
    | |||||||||    
T  5840998 caccaaggtta 5840988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 19977772 - 19977889
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatccta--ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||||||||||||||||||| | ||||||||  ||||||| |||| |||||||| || |||||||||||||||| ||||  |||||||||||||||||     
T  19977772 ccatttggtgtattgtacgcaaccttatcctattttttacaaaagaggctgtttccagaacttgaacccgtgacc-tttcggtcacatgacaacaacttc 19977870  T
Q  99 atcagttgcgccaaggtta 117  Q
    | ||||| |||||||||||    
T  19977871 accagttccgccaaggtta 19977889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 99323 - 99434
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    ||||||||||||||||||||||| ||  | | ||||  |||||| |||||||||||||||||||||||||||| ||||| |||| ||||||||||||||     
T  99323 ccatttggtgtattgtacgcagccttgccatgttttttacaagaggctgtttctaggacttgaacccgtgacc-tttcagtcacgtgacaacaacttta- 99420  T
Q  101 cagttgcgccaagg 114  Q
    | ||||||||||||    
T  99421 ctgttgcgccaagg 99434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 27573697 - 27573581
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattt-tacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    ||||||||||||||||||||||| ||| | | ||| ||||||||| |||||| |  |||||||||||  |||||||| || |||||||||||||||||||    
T  27573697 ccatttggtgtattgtacgcagccttaccatgtttatacacaagaggctgttgcccggacttgaaccaatgaccttt-cagtcacatgacaacaacttta 27573599  T
Q  100 tcagttgcgccaaggtta 117  Q
     |||||||||||||||||    
T  27573598 ccagttgcgccaaggtta 27573581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 22371131 - 22371017
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    ||||||||||||||||||||||| ||| ||| ||||  ||| || |||||||| ||||||||||||||||||||   || |||||||||||||||||||     
T  22371131 ccatttggtgtattgtacgcagccttaccctgttttt-acacgaggctgtttccaggacttgaacccgtgacctcc-cagtcacatgacaacaactttac 22371034  T
Q  101 cagttgcgccaaggtta 117  Q
    |||||| ||||||||||    
T  22371033 cagttgggccaaggtta 22371017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 25079810 - 25079893
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    |||||||||||| | |||||||| |||||||||||||||||||  || ||||||||||||||||||| |||||||||||||||||    
T  25079810 ttttacacaagaggttgtttctaagacttgaacccgtgaccttc-cagtcacatgacaacaactttaccagttgcgccaaggtta 25079893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 8 - 117
Target Start/End: Complemental strand, 7214604 - 7214494
Alignment:
Q  8 gtgtattgtacgcagcattatcct--attttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagtt 105  Q
    |||||||||||||||| ||| |||  |||||||||||||  ||||||| | ||||||||||| |||||||| || ||||||||||||||||||| |||||    
T  7214604 gtgtattgtacgcagccttaccctgtattttacacaagagactgtttccaagacttgaacccatgaccttt-cagtcacatgacaacaactttaccagtt 7214506  T
Q  106 gcgccaaggtta 117  Q
    | ||||| ||||    
T  7214505 gtgccaaagtta 7214494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 17623641 - 17623535
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatccta--ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||||||||||||||||||||| ||| |||   |||||||||||| | |||||| ||||||||||||||||||| || || || |||||||||||||||    
T  17623641 ccatttggtgtattgtacgcagccttaccctgatttttacacaagaggttgtttcgaggacttgaacccgtgacc-ttccagtcgcatgacaacaacttt 17623543  T
Q  99 atcagttg 106  Q
    | ||||||    
T  17623542 accagttg 17623535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 17668079 - 17667973
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatccta--ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||||||||||||||||||||| ||| |||   |||||||||||| | | |||| ||||||||||||||||||| || || ||||||||||||||||||    
T  17668079 ccatttggtgtattgtacgcagccttaccctgatttttacacaagaggttctttccaggacttgaacccgtgacc-ttccagtcacatgacaacaacttt 17667981  T
Q  99 atcagttg 106  Q
    | ||||||    
T  17667980 accagttg 17667973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 17705537 - 17705455
Alignment:
Q  34 tttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    ||||||||||| || ||||| ||||||||||||||||||||| | | ||||||||||||||||||| ||||||| |||||||||    
T  17705537 tttacacaagaggcggtttccaggacttgaacccgtgaccttct-agtcacatgacaacaactttaccagttgcaccaaggtta 17705455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 25641576 - 25641487
Alignment:
Q  3 atttggtgtattgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaac 92  Q
    ||||||||||||||||||| | ||| ||| |||| |||||| | |||||||| ||||||||||||||||||| ||||| ||||||||||||    
T  25641576 atttggtgtattgtacgcaactttaccctgttttcacacaaaatgctgtttccaggacttgaacccgtgacc-tttcagtcacatgacaac 25641487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 5450360 - 5450263
Alignment:
Q  4 tttggtgtattgtacgcagcatt---atcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    |||||||||||||||||||| ||   ||  | |||||||||||| | |||||| |||| |||||||||||||| ||||| |||||||||||||||||||    
T  5450360 tttggtgtattgtacgcagccttaccatgtttttttacacaagaggttgtttccaggaattgaacccgtgacc-tttcagtcacatgacaacaacttta 5450263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 17473014 - 17472931
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    |||||||||| | ||| |||||| ||| |||||||||||||||| ||||||  ||||||||||||||| ||||||| ||||||||    
T  17473014 ttttacacaataggctatttctaagacctgaacccgtgaccttt-caatcatttgacaacaactttattagttgcgtcaaggtta 17472931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 14444805 - 14444730
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaacccgtgacctt 75  Q
    ||||||||||||| |||| |||| ||| ||| |||| |||||||| |||||||| |||||||||||||||||||||    
T  14444805 ccatttggtgtatcgtacacagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacctt 14444730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 21377131 - 21377230
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    |||||||||| ||||||| |||| ||| ||| ||||  |||||||| | |||||||| ||||||||| ||| ||| ||||| ||||||||||||||||||    
T  21377131 ccatttggtgcattgtacccagccttaccctgttttttacacaagaggatgtttctatgacttgaactcgtaacc-tttcagtcacatgacaacaacttt 21377229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 4516413 - 4516522
Alignment:
Q  5 ttggtgtattgtacgcagcattatcc--tattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    ||||||||||||||||||| ||  ||  | |||||||||||| ||||||||||| |||||||   |||||| ||||| |||| |||||||||||||| |     
T  4516413 ttggtgtattgtacgcagcgttgccctgttttttacacaagaggctgtttctagaacttgaatatgtgacc-tttcagtcacgtgacaacaacttta-cc 4516510  T
Q  103 gttgcgccaagg 114  Q
    ||||||||||||    
T  4516511 gttgcgccaagg 4516522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 10546240 - 10546162
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt---acacaagacgctgtttctaggacttgaacccgtgaccttt 76  Q
    ||||||||||||||||||||||| ||| ||| ||||   | |||||| | |||||| ||||||||||||||||||||||    
T  10546240 ccatttggtgtattgtacgcagccttaccctgtttttttatacaagaggatgtttccaggacttgaacccgtgaccttt 10546162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 33 - 105
Target Start/End: Complemental strand, 44604897 - 44604826
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagtt 105  Q
    |||||||||||| | |||||| |||||||||||| |||||| || || ||||||||||||||||||| |||||    
T  44604897 ttttacacaagaggttgtttccaggacttgaacctgtgacc-ttccagtcacatgacaacaactttagcagtt 44604826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 26684678 - 26684789
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt---acacaagacg-ctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaact 96  Q
    |||||| || ||||||||||||| ||| | ||||||   |||||||| | ||||||  ||||||| ||||  |||||||| |||||||||||||||||||    
T  26684678 ccatttagtatattgtacgcagccttaccatatttttttacacaagaggtctgttttcaggacttaaacctttgaccttt-caatcacatgacaacaact 26684776  T
Q  97 ttatcagttgcgc 109  Q
    ||| |||||||||    
T  26684777 ttaccagttgcgc 26684789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 33795328 - 33795263
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    |||||| ||||| | ||||||  |||||||||||||||||| |||||||||| ||||||||||||||    
T  33795328 ttttacccaagaggttgtttccgggacttgaacccgtgacc-tttcaatcacgtgacaacaacttta 33795263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 111
Target Start/End: Original strand, 39914398 - 39914475
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgcca 111  Q
    |||||||||||| | |||||| || |||||| ||||||||| || || ||||||||||||||||||| ||| |||||||    
T  39914398 ttttacacaagaggttgtttccagtacttgatcccgtgacc-ttccagtcacatgacaacaactttaccagatgcgcca 39914475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 14544103 - 14544023
Alignment:
Q  36 tacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    ||||||||| |||||||| || || || ||| || |||||| || ||||||||||||||||||| || ||||||||||||||    
T  14544103 tacacaagaggctgtttccagtacctggacctgtaaccttt-cagtcacatgacaacaactttaccaattgcgccaaggtta 14544023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 17380296 - 17380391
Alignment:
Q  2 catttggtgtattgtacgcagcattatcctattt-tacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactt 97  Q
    |||||||||||||| || || | ||| ||| ||| ||||||||| | |||||| | ||||||||||||||||| ||||  |||||||||||||||||    
T  17380296 catttggtgtattgcacacaaccttaccctgtttatacacaagaggttgtttccaagacttgaacccgtgacc-tttcggtcacatgacaacaactt 17380391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 114
Target Start/End: Complemental strand, 35017848 - 35017781
Alignment:
Q  46 gctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaagg 114  Q
    |||||||  ||||||| ||||||||||||||  | ||||||||||||||||||| | ||||||||||||    
T  35017848 gctgttttcaggacttaaacccgtgacctttcaagtcacatgacaacaacttta-ccgttgcgccaagg 35017781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 36871569 - 36871509
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt-acacaagacgctgtttctaggact 60  Q
    ||||||||||||||||||||||| ||| ||| |||| |||||||| |||||||| ||||||    
T  36871569 ccatttggtgtattgtacgcagccttaccctgttttcacacaagaggctgtttccaggact 36871509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 117
Target Start/End: Original strand, 39189560 - 39189596
Alignment:
Q  81 tcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    ||||||||||||||||||| |||||||||||||||||    
T  39189560 tcacatgacaacaactttaccagttgcgccaaggtta 39189596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 45235908 - 45235975
Alignment:
Q  31 tattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    ||||||||| ||||  ||||||||||||||||||| ||||| | ||||| |||||||| ||||||||||    
T  45235908 tattttacagaagagactgtttctaggacttgaactcgtgatc-tttcagtcacatgagaacaacttta 45235975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 117
Target Start/End: Original strand, 27466263 - 27466305
Alignment:
Q  75 tttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    ||||| ||||||||||||||||||| |||||||||||| ||||    
T  27466263 tttcagtcacatgacaacaactttaccagttgcgccaatgtta 27466305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 29419981 - 29420046
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    |||||||||||| | |||||| ||||||||||| ||||||| ||||| |||  ||||||||||||||    
T  29419981 ttttacacaagaggttgtttccaggacttgaactcgtgacc-tttcagtcatgtgacaacaacttta 29420046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 40416963 - 40417028
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    ||||| |||||| | |||||| | ||||||||||||||||| || || |||||||||||||||||||    
T  40416963 ttttatacaagaggttgtttccatgacttgaacccgtgacc-ttccagtcacatgacaacaacttta 40417028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 24860046 - 24860157
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    ||||||||||||||||||||||| | | | | |||| |||| ||| | |||||| ||| ||| ||||||| |||||  || |||||||||||||| ||||    
T  24860046 ccatttggtgtattgtacgcagcct-accatgtttttacaccagaggttgtttccagggcttaaacccgtaaccttc-cagtcacatgacaacaatttta 24860143  T
Q  100 tcagttgcgccaag 113  Q
     |||||||||||||    
T  24860144 ccagttgcgccaag 24860157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 30826113 - 30826060
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatccta-ttttacacaagacgctgtttc 53  Q
    ||||||||||||||||||||| | ||| |||| |||||||||||| ||||||||    
T  30826113 ccatttggtgtattgtacgcaaccttaccctatttttacacaagaggctgtttc 30826060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 4e-38; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 12670308 - 12670423
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||| |||||||| ||||||||||||||||||| ||||| |||||||||||||||||||     
T  12670308 ccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgtttccaggacttgaacccgtgacc-tttcagtcacatgacaacaactttac 12670406  T
Q  101 cagttgcgccaaggtta 117  Q
    |||||||||||||||||    
T  12670407 cagttgcgccaaggtta 12670423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 20869560 - 20869674
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagt 104  Q
    |||||||||||||| |||| ||| ||| |||||||||||| |||||||| ||||||||||||||||||| ||||| ||||||||||||||||||| ||||    
T  20869560 ttggtgtattgtacacagccttaccctgttttacacaagaggctgtttccaggacttgaacccgtgacc-tttcagtcacatgacaacaactttaccagt 20869658  T
Q  105 tgcgccaaggttatcc 120  Q
    ||||||||||||||||    
T  20869659 tgcgccaaggttatcc 20869674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 30454155 - 30454270
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    ||||||||||||| ||||||||| ||| | | |||||||||||| |||||||| ||||||||||||||||||| ||||| |||||||||||||||||||     
T  30454155 ccatttggtgtatcgtacgcagccttaccttgttttacacaagaggctgtttccaggacttgaacccgtgacc-tttcagtcacatgacaacaactttac 30454253  T
Q  101 cagttgcgccaaggtta 117  Q
    |||||||||||||||||    
T  30454254 cagttgcgccaaggtta 30454270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 13160778 - 13160662
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    ||||||||||||||||||||||| ||| ||| |||| |||||||| |||||||||||||||||||||||||||| || || |||||||||||||||||||    
T  13160778 ccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttctaggacttgaacccgtgacc-ttacagtcacatgacaacaacttta 13160680  T
Q  100 tcagttgcgccaaggtta 117  Q
     |||||||||| ||||||    
T  13160679 ccagttgcgccgaggtta 13160662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 29521743 - 29521860
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||||||||||||||||||||| ||| ||| ||||  | |||||| |||||||| |||||||||||||||||||||  || ||||| ||||||||||||    
T  29521743 ccatttggtgtattgtacgcagccttaccctgttttttaaacaagaggctgtttccaggacttgaacccgtgaccttc-cagtcacacgacaacaacttt 29521841  T
Q  99 atcagttgcgccaaggtta 117  Q
    |||||||||||||||||||    
T  29521842 atcagttgcgccaaggtta 29521860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 36720873 - 36720756
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||||||||||||||||||||| ||| ||| ||||  |||||||| |||||||| ||||||||||||||||||| || || ||||||||||||||||||    
T  36720873 ccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacc-ttccagtcacatgacaacaacttt 36720775  T
Q  99 atcagttgcgccaaggtta 117  Q
    | ||||| |||||||||||    
T  36720774 accagttacgccaaggtta 36720756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 45071341 - 45071225
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    ||||||||||||||||||||||| ||| ||| |||| |||||||| |||||||| || |||||||||||||||| || ||||||||||||||||||||||    
T  45071341 ccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccagaacttgaacccgtgacc-ttacaatcacatgacaacaacttta 45071243  T
Q  100 tcagttgcgccaaggtta 117  Q
     ||||  |||||||||||    
T  45071242 ccagtatcgccaaggtta 45071225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 17823653 - 17823540
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatccta--ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    |||||||||||||| |||||||  |||||||   |||||||||||| |||||||| ||||||||||||||||||| ||||  ||||||||||||||||||    
T  17823653 ccatttggtgtattttacgcagtcttatcctggtttttacacaagaggctgtttccaggacttgaacccgtgacc-tttcggtcacatgacaacaacttt 17823555  T
Q  99 atcagttgcgccaag 113  Q
    | |||||||||||||    
T  17823554 accagttgcgccaag 17823540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 28817684 - 28817801
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||| ||||||||||||||||| ||| ||| ||||  |||||||| |||||||| ||||||||||||||||||| || || ||||||||||||||||||    
T  28817684 ccattgggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacc-ttccagtcacatgacaacaacttt 28817782  T
Q  99 atcagttgcgccaaggtta 117  Q
    | ||||||| |||||||||    
T  28817783 accagttgcaccaaggtta 28817801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 39461058 - 39461171
Alignment:
Q  5 ttggtgtattgtacgcagcattatcc--tattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    ||||||||||||||||||| |||  |  | |||||||||||| |||||||| ||||||||||||||||||| ||||| || |||||||||||||||| ||    
T  39461058 ttggtgtattgtacgcagccttactctgttttttacacaagaggctgtttccaggacttgaacccgtgacc-tttcagtctcatgacaacaactttacca 39461156  T
Q  103 gttgcgccaaggtta 117  Q
    |||||||||||||||    
T  39461157 gttgcgccaaggtta 39461171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 7136591 - 7136704
Alignment:
Q  5 ttggtgtattgtacgcagcattatccta--ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    ||||||||||||||||||| ||| |||   |||||||||||| | |||||| ||||||||||||| |||||||  || ||||||||||||||||||| ||    
T  7136591 ttggtgtattgtacgcagccttaccctggtttttacacaagaggttgtttccaggacttgaacccatgaccttc-cagtcacatgacaacaactttacca 7136689  T
Q  103 gttgcgccaaggtta 117  Q
    |||||||||||||||    
T  7136690 gttgcgccaaggtta 7136704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 35261756 - 35261639
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||||||||||||||||||| | ||| ||| ||||  ||||||||  ||||||| ||| |||||||||||||||||  || ||||||||||||||||||    
T  35261756 ccatttggtgtattgtacgcaaccttaccctgttttttacacaagagactgtttccagggcttgaacccgtgaccttc-cagtcacatgacaacaacttt 35261658  T
Q  99 atcagttgcgccaaggtta 117  Q
    | |||||||||||||||||    
T  35261657 accagttgcgccaaggtta 35261639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 44530226 - 44530109
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||||||||||||||||||||| ||| ||| ||||  |||||||| | |||||| | ||||||||||||||||||| | | |||||||||| |||||||    
T  44530226 ccatttggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaagacttgaacccgtgaccttct-agtcacatgacagcaacttt 44530128  T
Q  99 atcagttgcgccaaggtta 117  Q
    | |||||||||||||||||    
T  44530127 accagttgcgccaaggtta 44530109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 18164821 - 18164930
Alignment:
Q  4 tttggtgtattgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    |||||||||||||||||| | ||| ||| |||| |||||||| |||||||| ||||||||||||||||||| ||||| ||||||||||||||||| | |     
T  18164821 tttggtgtattgtacgcaaccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacc-tttcagtcacatgacaacaacttcaccg 18164919  T
Q  103 gttgcgccaag 113  Q
    |||||||||||    
T  18164920 gttgcgccaag 18164930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 26954206 - 26954092
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctatttt---acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatc 101  Q
    ||||||||||||||||||| ||| ||| ||||   |||||||| |||||||| ||||||||||||||||||||| | ||||||||||||||||||||| |    
T  26954206 ttggtgtattgtacgcagccttaccctgtttttttacacaagaggctgtttccaggacttgaacccgtgaccttct-aatcacatgacaacaactttacc 26954108  T
Q  102 agttgcgccaaggtta 117  Q
    | || |||||| ||||    
T  26954107 aattacgccaaagtta 26954092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 33 - 114
Target Start/End: Complemental strand, 28407459 - 28407379
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaagg 114  Q
    |||||||||||| |||||||| ||||||||||||||||||| || || ||||||||||||||||||| ||||||||||||||    
T  28407459 ttttacacaagaggctgtttccaggacttgaacccgtgacc-ttccagtcacatgacaacaactttaccagttgcgccaagg 28407379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 2626562 - 2626479
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||  ||||||||||||||||||| || ||||||||||||||    
T  2626562 ttttacacaagaggctgtttccaggacttgaacccgtgacc-tttcggtcacatgacaacaactttaccaattgcgccaaggtta 2626479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 113
Target Start/End: Complemental strand, 6760895 - 6760786
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    ||||||||||||||| ||| ||| ||| ||||  |||||||| |||||||| ||||||||||||||||||||| | | ||| ||||||||||||||| ||    
T  6760895 ttggtgtattgtacgaagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttct-agtcatatgacaacaactttacca 6760797  T
Q  103 gttgcgccaag 113  Q
    |||||||||||    
T  6760796 gttgcgccaag 6760786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 20284133 - 20284248
Alignment:
Q  5 ttggtgtattgtacgcagcattatcc----tattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    ||||||||||||||||||| ||| ||    | ||||| |||||| |||||||| ||||||||||||||||||| ||||| |||||||||||||||||||     
T  20284133 ttggtgtattgtacgcagccttacccttttttttttatacaagaggctgtttccaggacttgaacccgtgacc-tttcagtcacatgacaacaactttac 20284231  T
Q  101 cagttgcgccaaggtta 117  Q
    | |||||| ||||||||    
T  20284232 ccgttgcgtcaaggtta 20284248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 21070761 - 21070877
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctatttt-----acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    ||||||||||||||||||| ||| ||| ||||     | |||||| |||||||| ||||||||||||||||||| ||||| |||||||||||||||||||    
T  21070761 ttggtgtattgtacgcagccttaccctttttttttttatacaagaggctgtttccaggacttgaacccgtgacc-tttcagtcacatgacaacaacttta 21070859  T
Q  100 tcagttgcgccaaggtta 117  Q
     | |||||| ||||||||    
T  21070860 cccgttgcgtcaaggtta 21070877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 24365117 - 24365217
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatccta---ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactt 97  Q
    |||||||||||||||| |||||| ||| |||    |||||||||||| |||||||||||| |||||||||||||| |||| | |||||||||||||||||    
T  24365117 ccatttggtgtattgttcgcagccttaccctgattttttacacaagaggctgtttctagggcttgaacccgtgacatttt-agtcacatgacaacaactt 24365215  T
Q  98 ta 99  Q
    ||    
T  24365216 ta 24365217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 25250595 - 25250482
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    |||||||||||||||||||  || ||||||||  |||||| | |||||||| |||||||||||  ||||||||  || ||||||||||||||||||| ||    
T  25250595 ttggtgtattgtacgcagccataccctattttttacacaataggctgtttccaggacttgaacatgtgaccttc-cagtcacatgacaacaactttacca 25250497  T
Q  103 gttgcgccaaggtta 117  Q
    |||| ||||||||||    
T  25250496 gttgtgccaaggtta 25250482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 114
Target Start/End: Original strand, 30962865 - 30962944
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaagg 114  Q
    |||||||||||| |||||||| ||||||||||  ||||||| |||||||||||||||||||||||| || ||||||||||||    
T  30962865 ttttacacaagaggctgtttccaggacttgaagtcgtgacc-tttcaatcacatgacaacaacttt-tccgttgcgccaagg 30962944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 24245478 - 24245411
Alignment:
Q  49 gtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    ||||| |||||||||||||||||||||| || ||||||||||||||||||| ||||||| |||||||||    
T  24245478 gtttccaggacttgaacccgtgaccttt-cagtcacatgacaacaactttaccagttgccccaaggtta 24245411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 8897822 - 8897939
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||||||||||||||||| ||| ||| ||||||||  |||||||  | |||||| ||||||| |||||||||||||  |  ||||||||||||||||||    
T  8897822 ccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttg-ctgtcacatgacaacaacttt 8897920  T
Q  99 atcagttgcgccaaggtta 117  Q
    | |||||| |||| |||||    
T  8897921 accagttgtgccagggtta 8897939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 31457249 - 31457155
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaac 95  Q
    ||||||| ||||||||||||||| || ||||||||| |||||||| | |||||  ||||||||||||||||||| |||||  ||||||||||||||    
T  31457249 ccatttgatgtattgtacgcagccttttcctatttttacacaagaggttgtttacaggacttgaacccgtgacc-tttcagccacatgacaacaac 31457155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 44781567 - 44781677
Alignment:
Q  4 tttggtgtattgtacgcagcattatcctat--tttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatc 101  Q
    ||||||||||||||| |||| ||| ||| |  ||||||||||| | |||||| ||||||||||||||||| | ||||| |||| |||||||||||||| |    
T  44781567 tttggtgtattgtacacagccttaccctgtcttttacacaagaggttgtttccaggacttgaacccgtgaac-tttcagtcacgtgacaacaacttta-c 44781664  T
Q  102 agttgcgccaagg 114  Q
     ||||||||||||    
T  44781665 cgttgcgccaagg 44781677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 114
Target Start/End: Original strand, 42083791 - 42083870
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaagg 114  Q
    |||||||||| | |||||||| ||||||||||||||||||| ||||| |||| ||||||||| |||| | ||||||||||||    
T  42083791 ttttacacaaaaggctgtttccaggacttgaacccgtgacc-tttcagtcacgtgacaacaatttta-ccgttgcgccaagg 42083870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 5135347 - 5135418
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtg 70  Q
    |||||||||||||||||| |||| ||| ||| ||||  |||||||| |||||||| ||||||||||||||||    
T  5135347 ccatttggtgtattgtacacagccttaccctcttttttacacaagaggctgtttccaggacttgaacccgtg 5135418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 35105995 - 35105902
Alignment:
Q  6 tggtgtattgtacgcagcatt--atcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    |||||||||||||||||| ||  |  || |||||||||||| | |||||| ||||||||||||||||||| |||||  ||| |||||||||||||    
T  35105995 tggtgtattgtacgcagccttacactctcttttacacaagaggttgtttccaggacttgaacccgtgacc-tttcagccacgtgacaacaacttt 35105902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 389721 - 389643
Alignment:
Q  2 catttggtgtattgtacgcagcattatcctatttt----acacaagacgctgtttctaggacttgaacccgtgaccttt 76  Q
    |||||||||||||||||||| | ||| ||| ||||    |||||||| | |||||| ||||||||||||||||||||||    
T  389721 catttggtgtattgtacgcaaccttaccctgtttttttgacacaagagggtgtttccaggacttgaacccgtgaccttt 389643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 114
Target Start/End: Original strand, 14018061 - 14018140
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaagg 114  Q
    ||||||||||||  ||||||| | ||||||||||| ||||| |||||||||| |||||||||| ||| | ||||||||||||    
T  14018061 ttttacacaagagactgtttccaagacttgaacccatgacc-tttcaatcacgtgacaacaacatta-ccgttgcgccaagg 14018140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 23286383 - 23286432
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgt 50  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||| |||||    
T  23286383 ccatttggtgtattgtacgcagctttaccctgttttacacaagaggctgt 23286432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 11748342 - 11748259
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    ||||||| |||| |||||||| | ||||||||||||||| | ||||| |||||||||||||| || | ||||||| |||| ||||    
T  11748342 ttttacaaaagaggctgtttccaagacttgaacccgtga-catttcagtcacatgacaacaatttcaccagttgcaccaaagtta 11748259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 117
Target Start/End: Original strand, 40605041 - 40605080
Alignment:
Q  78 caatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    |||||||||||||||||||||| |||||||||||| ||||    
T  40605041 caatcacatgacaacaactttaccagttgcgccaaagtta 40605080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 12625967 - 12625858
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt---acacaagacgctgtttctaggacttgaacccgtgaccttttcaa-tcacatgacaacaact 96  Q
    ||||||||||||||||| ||||  ||| ||| ||||   |||||||| | |||||| ||||||||| ||||||||||   ||| ||||| ||||||||||    
T  12625967 ccatttggtgtattgtatgcagtcttaccctgtttttttacacaagaggttgtttccaggacttgagcccgtgaccta--caagtcacacgacaacaact 12625870  T
Q  97 ttatcagttgcg 108  Q
    ||| ||||||||    
T  12625869 ttaccagttgcg 12625858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 22598200 - 22598135
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    |||||||||||| | |||||| |||| |||||||||||||| ||||| |||  ||||||||||||||    
T  22598200 ttttacacaagaggttgtttccaggatttgaacccgtgacc-tttcagtcatgtgacaacaacttta 22598135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 117
Target Start/End: Original strand, 23286432 - 23286468
Alignment:
Q  81 tcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    ||||||||||||||||||| |||||||| ||||||||    
T  23286432 tcacatgacaacaactttaccagttgcgacaaggtta 23286468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 4e-38; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 48598883 - 48598998
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||| |||||||| ||||||||||||||||||| ||||| |||||||||||||||||||     
T  48598883 ccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgtttccaggacttgaacccgtgacc-tttcagtcacatgacaacaactttac 48598981  T
Q  101 cagttgcgccaaggtta 117  Q
    |||||||||||||||||    
T  48598982 cagttgcgccaaggtta 48598998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 20225059 - 20224944
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||| | |||||| ||||||||||||| ||||| ||||| |||||||||||||||||||     
T  20225059 ccatttggtgtattgtacgcagccttaccctgttttacacaagaggttgtttccaggacttgaacccatgacc-tttcagtcacatgacaacaactttac 20224961  T
Q  101 cagttgcgccaaggtta 117  Q
    |||||||||||||||||    
T  20224960 cagttgcgccaaggtta 20224944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 47528588 - 47528703
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||| |||||||| |||||||||||| |||||| ||||| |||||||||||||||||||     
T  47528588 ccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgtttccaggacttgaacctgtgacc-tttcagtcacatgacaacaactttac 47528686  T
Q  101 cagttgcgccaaggtta 117  Q
    ||||||| |||||||||    
T  47528687 cagttgcaccaaggtta 47528703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 5306722 - 5306838
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcct-attttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    ||||||||||||||||||||| | ||| ||| ||||||||||||| |||||||| ||||||||||||||||||| ||||| |||||||||| ||||||||    
T  5306722 ccatttggtgtattgtacgcaaccttaccctgattttacacaagaggctgtttccaggacttgaacccgtgacc-tttcagtcacatgacatcaacttta 5306820  T
Q  100 tcagttgcgccaaggtta 117  Q
     |||||||||||||||||    
T  5306821 ccagttgcgccaaggtta 5306838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 5648335 - 5648219
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    ||||||||||||||||||||||| ||| ||| |||| |||||||| |||||||| ||||||||||||||||||| || || |||||||||||||||||||    
T  5648335 ccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacc-ttacagtcacatgacaacaacttta 5648237  T
Q  100 tcagttgcgccaaggtta 117  Q
     |||||||||||||||||    
T  5648236 ccagttgcgccaaggtta 5648219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 6430684 - 6430800
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    ||||||||||||||||||||||| ||| ||| |||| |||||||| |||||||| | |||||||||||||||||||| || |||||||||||||||||||    
T  6430684 ccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccatgacttgaacccgtgaccttt-cagtcacatgacaacaacttta 6430782  T
Q  100 tcagttgcgccaaggtta 117  Q
     |||||||||||||||||    
T  6430783 ccagttgcgccaaggtta 6430800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 5 - 123
Target Start/End: Complemental strand, 16911635 - 16911516
Alignment:
Q  5 ttggtgtattgtacgcagcattatcct-attt-tacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    ||||||||||||||||||| ||| ||| |||| ||||||||| |||||||||||||||||||||||||||| ||| | ||||||||||||||||||| ||    
T  16911635 ttggtgtattgtacgcagccttaccctgatttgtacacaagaggctgtttctaggacttgaacccgtgacc-tttaagtcacatgacaacaactttacca 16911537  T
Q  103 gttgcgccaaggttatcctca 123  Q
    ||||||||||||||| |||||    
T  16911536 gttgcgccaaggttaccctca 16911516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 11054206 - 11054321
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    ||||||||||||||||||||||  ||| ||| ||||||||||||  ||||||  ||||||||||||||||||| ||||| |||||||||||||||||||     
T  11054206 ccatttggtgtattgtacgcagtcttaccctgttttacacaagagactgttttcaggacttgaacccgtgacc-tttcagtcacatgacaacaactttac 11054304  T
Q  101 cagttgcgccaaggtta 117  Q
    |||||||||||| ||||    
T  11054305 cagttgcgccaaagtta 11054321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 21647037 - 21646921
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    ||||| ||||||||||||| ||| ||||||||  |||||||| |||||||| |||||||||||| ||||||||  || ||||||||||||||||||| ||    
T  21647037 ttggtatattgtacgcagccttaccctattttttacacaagaggctgtttccaggacttgaacctgtgaccttc-cagtcacatgacaacaactttacca 21646939  T
Q  103 gttgcgccaaggttatcc 120  Q
    ||||||||||||||||||    
T  21646938 gttgcgccaaggttatcc 21646921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 30639456 - 30639340
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    ||||||||||||||||||||||| ||| ||| |||| ||||||||  ||||||| |||||||||||| ||||||||| || ||||| |||||||||||||    
T  30639456 ccatttggtgtattgtacgcagccttaccctgtttttacacaagagtctgtttccaggacttgaaccagtgaccttt-cagtcacaagacaacaacttta 30639358  T
Q  100 tcagttgcgccaaggtta 117  Q
     |||||||||||||||||    
T  30639357 ccagttgcgccaaggtta 30639340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 39077854 - 39077948
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaact 96  Q
    ||||||||| ||||||||||| | ||| ||| |||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  39077854 ccatttggtatattgtacgcaaccttaccctgttttacacaagaggctgtttccaggacttgaacccgtgacc-tttcaatcacatgacaacaact 39077948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 16408665 - 16408777
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    ||||||||||||||||||  ||| ||| ||||  |||||||| |||||||| ||||||||||||||||||| || || ||||||||||||||||||| ||    
T  16408665 ttggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacc-ttccagtcacatgacaacaactttacca 16408763  T
Q  103 gttgcgccaaggtt 116  Q
    ||||||||||||||    
T  16408764 gttgcgccaaggtt 16408777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 14590915 - 14590797
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt---acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactt 97  Q
    ||||||| ||||||||| ||||| ||| ||| ||||   | |||||| ||||||||||||||||||| ||||||||||| || |||||||||||||||||    
T  14590915 ccatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgaccttt-cagtcacatgacaacaactt 14590817  T
Q  98 tatcagttgcgccaaggtta 117  Q
    || |||||||||||||||||    
T  14590816 taccagttgcgccaaggtta 14590797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 54730323 - 54730209
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctatttt---acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatc 101  Q
    |||||||||| |||||||| ||||||||||||   |||||||| ||||||||||||||||||||||||||||||||   ||||||||||||||||||| |    
T  54730323 ttggtgtattatacgcagccttatcctatttttttacacaagaggctgtttctaggacttgaacccgtgacctttt-ggtcacatgacaacaactttacc 54730225  T
Q  102 agttgcgccaaggtta 117  Q
      ||||||||| ||||    
T  54730224 gattgcgccaaagtta 54730209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 40915905 - 40915802
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    ||||||||||||||||||||||| ||| | | |||| |||||||| |||||||| ||||||||||||||||||||| | | |||||||||||||||||||    
T  40915905 ccatttggtgtattgtacgcagccttaccttgtttttacacaagaggctgtttccaggacttgaacccgtgaccttat-agtcacatgacaacaacttta 40915807  T
Q  100 tcagt 104  Q
     ||||    
T  40915806 ccagt 40915802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 9832371 - 9832446
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttt 76  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||| |||||||  ||||||||||||||||||||||    
T  9832371 ccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgttttcaggacttgaacccgtgaccttt 9832446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 10277815 - 10277886
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgac 72  Q
    ||||||||||||||||||||||| ||||||||||||| |||||| |||||||| |||| |||||||||||||    
T  10277815 ccatttggtgtattgtacgcagccttatcctattttatacaagaggctgtttcaaggatttgaacccgtgac 10277886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 17043452 - 17043549
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcct--attttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactt 97  Q
    ||||||||||||||||||||||| ||| |||  ||||||||||||| |||||||| |||||||||||| |||||| ||||| |||| ||||||||||||    
T  17043452 ccatttggtgtattgtacgcagccttaccctgtattttacacaagaggctgtttccaggacttgaacctgtgacc-tttcagtcacttgacaacaactt 17043549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 17315390 - 17315473
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    |||||||||||| | |||||| |||| ||||||||||||||||| || ||||||||||||||||||| | |||||||||||||||    
T  17315390 ttttacacaagaggttgtttcgaggaattgaacccgtgaccttt-cagtcacatgacaacaactttaccggttgcgccaaggtta 17315473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 30496380 - 30496491
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    ||||||||||||||||| ||||| ||| ||   ||||||||||| |||||||| | ||||||||| ||||||| ||||| |||| |||||||||||||      
T  30496380 ccatttggtgtattgtatgcagccttacccgtgtttacacaagaggctgtttccatgacttgaacacgtgacc-tttcagtcacgtgacaacaactttta 30496478  T
Q  101 cagttgcgccaag 113  Q
    |||||||||||||    
T  30496479 cagttgcgccaag 30496491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 12257688 - 12257750
Alignment:
Q  36 tacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||    
T  12257688 tacacaagacgctgtttctaggatttgaacccgtgacc-tttcaatcacgtgacaacaacttta 12257750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 29207956 - 29208031
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttt 76  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||| ||  |||| ||||||||||||||||||||||    
T  29207956 ccatttggtgtattgtacgcagccttaccctgttttacacaagaggcaatttccaggacttgaacccgtgaccttt 29208031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 14983911 - 14983788
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    |||||| |||||||||| ||| | ||| ||||||||  |||||||| |||||||| | |||||||| |||||||| || |||||| ||||||||||||||    
T  14983911 ccatttagtgtattgtaggcaaccttaccctattttttacacaagaggctgtttcaaagacttgaatccgtgacc-ttccaatcatatgacaacaacttt 14983813  T
Q  99 atcagttgcgccaaggttatcctca 123  Q
    | |||||  |||||||||| |||||    
T  14983812 accagttctgccaaggttaccctca 14983788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 23501812 - 23501753
Alignment:
Q  57 gacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    |||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||    
T  23501812 gacttgaacccgtgaccttt-cagtcacatgacaacaactttaccagttgcgccaaggtta 23501753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 30352683 - 30352766
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    |||||||||||| |||||||| ||||||  |||||||||||||| |  |||| |||||||||||||| |||||||||||||||||    
T  30352683 ttttacacaagaggctgtttccaggactctaacccgtgaccttt-cggtcacttgacaacaactttaccagttgcgccaaggtta 30352766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 41018854 - 41018945
Alignment:
Q  3 atttggtgtattgtacgcagcattatccta-ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaa 94  Q
    ||||||||||||||||| ||| ||| |||| |||||||||||| | |||||| ||||||||||||||||||| ||||| |||| |||||||||    
T  41018854 atttggtgtattgtacgtagccttaccctaattttacacaagaggttgtttccaggacttgaacccgtgacc-tttcagtcacgtgacaacaa 41018945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 5313099 - 5313169
Alignment:
Q  46 gctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    |||||||  |||| ||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||    
T  5313099 gctgttttcaggaattgaacccgtgaccttt-caatcacatgacaacaactttaccagttacgccaaggtta 5313169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 8473680 - 8473790
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    ||||||||||||||||| ||||| ||| ||| ||  |||||||| |||||||| ||||||||||||||  ||| || |  ||| |||||||||||||||     
T  8473680 ccatttggtgtattgtatgcagccttaccctgttaaacacaagaggctgtttccaggacttgaacccgcaacc-ttccggtcatatgacaacaactttac 8473778  T
Q  101 cagttgcgccaa 112  Q
    ||||||||||||    
T  8473779 cagttgcgccaa 8473790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 10660477 - 10660364
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    ||||||||||||| |||||  || ||||||||  ||| |||| | |||||| |||||||||||  || |||||| || ||||||||||||||||||| ||    
T  10660477 ttggtgtattgtatgcagccataccctattttttacataagaggttgtttccaggacttgaacatgtaaccttt-cagtcacatgacaacaactttacca 10660379  T
Q  103 gttgcgccaaggtta 117  Q
    |||||||||||||||    
T  10660378 gttgcgccaaggtta 10660364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 10874622 - 10874509
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    ||||||||||||| |||||  || ||||||||  ||| |||| | |||||| |||||||||||  || |||||| || ||||||||||||||||||| ||    
T  10874622 ttggtgtattgtatgcagccataccctattttttacataagaggttgtttccaggacttgaacatgtaaccttt-cagtcacatgacaacaactttacca 10874524  T
Q  103 gttgcgccaaggtta 117  Q
    |||||||||||||||    
T  10874523 gttgcgccaaggtta 10874509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 19027921 - 19027829
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaact 96  Q
    ||||||||||||||||||| ||| ||| ||||  |||||||| | |||||| ||||||||||||||||||| ||||| |||| |||||||||||    
T  19027921 ttggtgtattgtacgcagccttaccctgttttttacacaagatgttgtttccaggacttgaacccgtgacc-tttcagtcacgtgacaacaact 19027829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 47444034 - 47443957
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttt 76  Q
    ||||||||||||||||||||||| ||| ||| ||||  || ||||| |||||||| ||||||||||||||||||||||    
T  47444034 ccatttggtgtattgtacgcagccttaccctgttttttacgcaagaggctgtttccaggacttgaacccgtgaccttt 47443957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 37494894 - 37494811
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    |||||||||||| | |||||| |||||||||||| |||||| ||||| || |||| ||||||||||| ||||||| |||||||||    
T  37494894 ttttacacaagaggttgtttccaggacttgaacctgtgacc-tttcagtcgcatggcaacaactttaccagttgcaccaaggtta 37494811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 54175137 - 54175028
Alignment:
Q  4 tttggtgtattgtacgcagcattatcct-attttacacaagacgctg-tttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatc 101  Q
    |||||||||||||||||||| ||| |||  |||||||||||| |||| |||| |||||||||| |||||| | ||||| ||||||||||||||| |||||    
T  54175137 tttggtgtattgtacgcagccttaccctgtttttacacaagaggctgttttccaggacttgaatccgtga-catttcagtcacatgacaacaac-ttatc 54175040  T
Q  102 agttgcgccaagg 114  Q
     ||||||||||||    
T  54175039 -gttgcgccaagg 54175028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 55830786 - 55830896
Alignment:
Q  8 gtgtattgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaac-ccgtgaccttttcaatcacatgacaacaactttatcagtt 105  Q
    |||||||||||||||||||| ||| |||  ||||||||  ||||||| |  |||||||| ||||||||||  | |||||||||||||||||||| |||||    
T  55830786 gtgtattgtacgcagcattaccctgtttacacacaagagactgtttccaaaacttgaactccgtgaccttc-cgatcacatgacaacaactttaccagtt 55830884  T
Q  106 gcgccaaggtta 117  Q
    ||| ||||||||    
T  55830885 gcgtcaaggtta 55830896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 487200 - 487292
Alignment:
Q  8 gtgtattgtacgcagcattatcctatttta--cacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    |||||||||||||||| ||| | | |||||  ||||||| | |||||| | ||||||||||||||||| ||||| |||||||||||||||||||    
T  487200 gtgtattgtacgcagctttaccttgttttatacacaagaggttgtttccaagacttgaacccgtgacc-tttcagtcacatgacaacaacttta 487292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 23580300 - 23580365
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    |||||||||||| ||| ||||||| |||||||||||||||| ||||| |||| ||||||||||||||    
T  23580300 ttttacacaagaggctctttctagaacttgaacccgtgacc-tttcagtcacgtgacaacaacttta 23580365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 47441588 - 47441699
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatccta--ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    |||||||||||||||||| |||| ||| |||   ||||||| ||||  |||||||| ||||||||||| |||||| ||||| |||| |||||||||||||    
T  47441588 ccatttggtgtattgtacacagccttaccctgatttttacaaaagagactgtttcttggacttgaacctgtgacc-tttcagtcacgtgacaacaacttt 47441686  T
Q  99 atcagttgcgccaa 112  Q
    | | ||||||||||    
T  47441687 a-ccgttgcgccaa 47441699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 111
Target Start/End: Original strand, 49938682 - 49938759
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgcca 111  Q
    |||||||||||| |||||||| |||||||||||| |||||| ||||| |||| |||||||||||||  | |||||||||    
T  49938682 ttttacacaagaggctgtttccaggacttgaacctgtgacc-tttcagtcacgtgacaacaacttttaccgttgcgcca 49938759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 50856344 - 50856407
Alignment:
Q  49 gtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaagg 114  Q
    ||||||||||||||||||||||||| |||||||||  |||||||||||||| | ||||||||||||    
T  50856344 gtttctaggacttgaacccgtgacc-tttcaatcatgtgacaacaacttta-ccgttgcgccaagg 50856407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 7385534 - 7385628
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaa 94  Q
    ||||||||||||||| || || | ||| ||||||||  ||||| || |||||||| ||| ||||||||||||||| ||||| ||||||||||||||    
T  7385534 ccatttggtgtattgcacacaaccttaccctattttttacacatgaggctgtttccagggcttgaacccgtgacc-tttcagtcacatgacaacaa 7385628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 42164240 - 42164317
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaa 112  Q
    |||||||||||| | |||||| | ||||||||||||||||| ||||| |||||||||||||| |||| | ||||||||||    
T  42164240 ttttacacaagaggttgtttccaagacttgaacccgtgacc-tttcagtcacatgacaacaatttta-ccgttgcgccaa 42164317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 104
Target Start/End: Original strand, 44363224 - 44363294
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagt 104  Q
    ||||||||| || |||||||  ||||||||||| ||||||| ||||| ||||||||||||||||||| ||||    
T  44363224 ttttacacacgaggctgttttcaggacttgaactcgtgacc-tttcagtcacatgacaacaactttaccagt 44363294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 10380003 - 10380077
Alignment:
Q  3 atttggtgtattgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaacccgtgaccttt 76  Q
    |||||||||||||||||||   |||||||||||| |||||||| | ||||| ||||||||||||  |||||||||    
T  10380003 atttggtgtattgtacgcaattttatcctatttttacacaagaggttgtttgtaggacttgaacaagtgaccttt 10380077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 13256463 - 13256572
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    ||||||||||||||||||| ||| ||| ||||  |||||||| |||    | ||||||||||||  |||||||  || ||||||||||||||||||| ||    
T  13256463 ttggtgtattgtacgcagccttaccctgttttttacacaagaggct----ccaggacttgaacctatgaccttc-cagtcacatgacaacaactttacca 13256557  T
Q  103 gttgcgccaaggtta 117  Q
    ||||| |||||||||    
T  13256558 gttgcaccaaggtta 13256572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 20908698 - 20908795
Alignment:
Q  4 tttggtgtattgtacgcagcattatc--ctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    |||||||||||||||||||| ||| |  || ||||| | |||||| |||||| | |||||||||  || || |||||| |||||||||||||||||||    
T  20908698 tttggtgtattgtacgcagccttaccttcttttttagaaaagacgatgtttccatgacttgaacatgtaacattttcagtcacatgacaacaacttta 20908795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 25463165 - 25463108
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaa 91  Q
    |||||||||||| | |||||| ||||||||||||||||||| ||||| |||||||||||    
T  25463165 ttttacacaagaggttgtttccaggacttgaacccgtgacc-tttcagtcacatgacaa 25463108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 30690275 - 30690340
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||| |||| ||||||| ||||||    
T  30690275 ttttacacaagaggctttttccaggacttgaacccgtgacc-tttcagtcacttgacaaccacttta 30690340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 18969737 - 18969696
Alignment:
Q  81 tcacatgacaacaactttatcagttgcgccaaggttatcctc 122  Q
    ||||||||||||||||||| ||||||||||||||||| ||||    
T  18969737 tcacatgacaacaactttaccagttgcgccaaggttaccctc 18969696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 35567247 - 35567148
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||||||||| |||||| |||| ||| ||| ||||  |||||||  |||||||| | ||||||||||| ||||| ||||| | ||||||||||||||||    
T  35567247 ccatttggtgtgttgtacacagccttaccctgttttttacacaagtggctgtttccaagacttgaacccatgacc-tttcagttacatgacaacaacttt 35567149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 114
Target Start/End: Original strand, 54640431 - 54640510
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaagg 114  Q
    |||||||||||| |||||||| | ||||||||||||||||| |||||  ||| ||||||||| |||| | ||||||||||||    
T  54640431 ttttacacaagaggctgtttccaagacttgaacccgtgacc-tttcagccacgtgacaacaatttta-ccgttgcgccaagg 54640510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 7038126 - 7038041
Alignment:
Q  4 tttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgac 89  Q
    |||||||||||||||| ||  ||| ||||||||  |||||||| |||||||| |||||||||||| |||||| ||||| |||||||||    
T  7038126 tttggtgtattgtacgaagtcttaccctattttttacacaagaagctgtttc-aggacttgaacctgtgacc-tttcagtcacatgac 7038041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 25343261 - 25343152
Alignment:
Q  4 tttggtgtattgtacgcagcattatcc--tattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatc 101  Q
    |||||||||||||||||||| ||| ||  | ||||||||||||  || |||| || ||||||||| |||||| | ||| |||| |||||||||||||| |    
T  25343261 tttggtgtattgtacgcagccttaccctgttttttacacaagagactatttccagaacttgaacctgtgacc-tatcagtcacgtgacaacaactttacc 25343163  T
Q  102 agttgcgccaag 113  Q
    | ||||||||||    
T  25343162 a-ttgcgccaag 25343152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 43035289 - 43035226
Alignment:
Q  35 ttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    |||||||||| | ||||||  |||||||||||||||||| ||||| |||| ||||||||||||||    
T  43035289 ttacacaagaggttgtttcctggacttgaacccgtgacc-tttcagtcacgtgacaacaacttta 43035226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 116
Target Start/End: Complemental strand, 54967064 - 54966983
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtt 116  Q
    |||||||||||| | | |||| || ||||||||  ||||||||| || ||||||||||||||||||| | ||||||||||||||    
T  54967064 ttttacacaagaggttctttccagaacttgaacatgtgaccttt-cagtcacatgacaacaacttta-ccgttgcgccaaggtt 54966983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 55766531 - 55766641
Alignment:
Q  8 gtgtattgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaaccc-gtgaccttttcaatcacatgacaacaactttatcagtt 105  Q
    |||||||||||||||| ||| ||| |||  ||||||||  ||||||| |  |||||||||| ||||||||  |  ||||||||||||||||||| |||||    
T  55766531 gtgtattgtacgcagccttaccctgtttacacacaagaaactgtttccaaaacttgaaccccgtgaccttc-cggtcacatgacaacaactttaccagtt 55766629  T
Q  106 gcgccaaggtta 117  Q
    ||| ||||||||    
T  55766630 gcgtcaaggtta 55766641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 9987892 - 9987957
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctat--tttacacaagacgctgtttctaggacttgaa 64  Q
    ||||||||||||||||| ||||| ||| |||||  ||||||||||| | |||||| ||||||||||    
T  9987892 ccatttggtgtattgtatgcagccttaccctattgtttacacaagaggttgtttccaggacttgaa 9987957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 20405129 - 20405053
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    |||||||||||| ||||||||||||       |||||||||||  || ||||||||||||||||||| |||||||| ||||||||    
T  20405129 ttttacacaagaggctgtttctagg-------cccgtgaccttc-cagtcacatgacaacaactttaccagttgcgtcaaggtta 20405053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 32478877 - 32478945
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    |||||||| ||| | |||||| |||||||||||| |||||| | ||  ||||||||||||||||||||||    
T  32478877 ttttacactagaggttgtttccaggacttgaacctgtgacc-tctcggtcacatgacaacaactttatca 32478945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 92
Target Start/End: Original strand, 32629366 - 32629418
Alignment:
Q  39 acaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaac 92  Q
    |||||| |||||||| |||| |||||||||||||| ||||| ||||||||||||    
T  32629366 acaagaggctgtttcgaggatttgaacccgtgacc-tttcagtcacatgacaac 32629418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 114
Target Start/End: Original strand, 49938530 - 49938610
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaagg 114  Q
    |||||||||| |||||| ||| | |||||||| | ||||||||| || |||| |||||||||||||  | ||||||||||||    
T  49938530 ttttacacaatacgctgcttccaagacttgaatctgtgaccttt-cagtcacgtgacaacaacttttaccgttgcgccaagg 49938610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 117
Target Start/End: Original strand, 29879636 - 29879672
Alignment:
Q  81 tcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  29879636 tcacatgacaacaactttatcagttgcaccaatgtta 29879672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 9e-36; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 21172067 - 21172182
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||| |||||||| ||||||||||||||||||| ||||| | |||||||||||||||||     
T  21172067 ccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgtttccaggacttgaacccgtgacc-tttcagttacatgacaacaactttac 21172165  T
Q  101 cagttgcgccaaggtta 117  Q
    |||||||||||||||||    
T  21172166 cagttgcgccaaggtta 21172182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 10693131 - 10693245
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||| |||||||| ||||||||||||||||||| ||||| |||||||||||||||||||     
T  10693131 ccatttggtgtattgtacgcagccttaccctcttttacacaagaggctgtttccaggacttgaacccgtgacc-tttcagtcacatgacaacaactttac 10693229  T
Q  101 cagttgcgccaaggtt 116  Q
     |||||||||||||||    
T  10693230 tagttgcgccaaggtt 10693245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 32758336 - 32758221
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    |||||||||||||||||| |||| ||| ||| |||||||||||| |||||||| |||||||||||| |||||| ||||| |||||||||||||||||||     
T  32758336 ccatttggtgtattgtacacagccttaccctgttttacacaagaggctgtttccaggacttgaacctgtgacc-tttcagtcacatgacaacaactttac 32758238  T
Q  101 cagttgcgccaaggtta 117  Q
    |||||||||||||||||    
T  32758237 cagttgcgccaaggtta 32758221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 2541077 - 2541195
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||||||||||| ||||||||| ||| ||| ||||  |||||||| |||||||| |||||||||||||||||||||| || ||||||||||||||||||    
T  2541077 ccatttggtgtatagtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttccagtcacatgacaacaacttt 2541176  T
Q  99 atcagttgcgccaaggtta 117  Q
    | |||||||||||||||||    
T  2541177 accagttgcgccaaggtta 2541195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 47077913 - 47078028
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    |||||| |||||||||||||| | |||  |||||||||||||||  ||||||| ||||||||||||||||||| ||||| |||||||||||||||||||     
T  47077913 ccattttgtgtattgtacgcaactttactctattttacacaagagactgtttccaggacttgaacccgtgacc-tttcagtcacatgacaacaactttac 47078011  T
Q  101 cagttgcgccaaggtta 117  Q
    |||||||||||||||||    
T  47078012 cagttgcgccaaggtta 47078028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 48735180 - 48735296
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttcta-ggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    ||||||||||||||||||||||| ||| | | |||||||||||| | |||||| | ||||||||||||||||||||| || |||||||||||||||||||    
T  48735180 ccatttggtgtattgtacgcagccttaccgtgttttacacaagaggttgtttccaaggacttgaacccgtgaccttt-cagtcacatgacaacaacttta 48735278  T
Q  100 tcagttgcgccaaggtta 117  Q
     |||||||||||||||||    
T  48735279 ccagttgcgccaaggtta 48735296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 46354267 - 46354154
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    ||||||||||||||||||| ||| ||| ||||  |||||||| | |||||| |||||||||||||||||||||  |||||||||||||||||||||| ||    
T  46354267 ttggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgaccttc-caatcacatgacaacaactttacca 46354169  T
Q  103 gttgcgccaaggtta 117  Q
    |||||||||||||||    
T  46354168 gttgcgccaaggtta 46354154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 19426947 - 19427059
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||||||||||||||||||||  ||| ||||||||  |||||||| |||||||| ||||||||||||||||||| ||||  ||||||||||||||||||    
T  19426947 ccatttggtgtattgtacgcagtcttaccctattttttacacaagaggctgtttccaggacttgaacccgtgacc-tttcggtcacatgacaacaacttt 19427045  T
Q  99 atcagttgcgccaa 112  Q
    | ||||||||||||    
T  19427046 accagttgcgccaa 19427059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 42391158 - 42391251
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaac 95  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||| |||||||| ||||||||||||||||||| ||||| |||||||||||||||    
T  42391158 ccatttggtgtattgtacgcagccttaccctgttttacacaagaagctgtttccaggacttgaacccgtgacc-tttcagtcacatgacaacaac 42391251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 2662993 - 2663106
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||||| |||||||| ||||||||||||  ||||   | || |||||| ||||||||||||     
T  2662993 ccatttggtgtattgtacgcagccttaccctattttacacaagaggctgtttccaggacttgaacctatgac---tccagtcacataacaacaactttac 2663089  T
Q  101 cagttgcgccaaggtta 117  Q
     ||||||||||||||||    
T  2663090 tagttgcgccaaggtta 2663106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 11741870 - 11741774
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||| |||||||  ||||||||||||| ||||| ||||| ||||||||||||||||||    
T  11741870 ccatttggtgtattgtacgcagccttaccctattttacactagaagctgttttcaggacttgaacccatgacc-tttcagtcacatgacaacaacttt 11741774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 42476948 - 42476833
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    ||||||||||||||||||||||| ||| | | ||||||||||||  ||||||| || ||||||| |||||||||||| | |||||||||||||||||||     
T  42476948 ccatttggtgtattgtacgcagccttaccttgttttacacaagagactgtttccagaacttgaatccgtgacctttt-agtcacatgacaacaactttac 42476850  T
Q  101 cagttgcgccaaggtta 117  Q
    ||||| |||||| ||||    
T  42476849 cagttacgccaatgtta 42476833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 33871968 - 33872066
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcct-attttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    ||||||||||||||||||||||| |||||||  |||||||||||| | |||||| |||||||||||||| |||| ||||| |||||||||||||||||||    
T  33871968 ccatttggtgtattgtacgcagccttatcctgtttttacacaagaggttgtttccaggacttgaacccgcgacc-tttcagtcacatgacaacaacttta 33872066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 42798746 - 42798629
Alignment:
Q  1 ccatttggtgtattgtacgcagcatta--tcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||||||||||||||||||||| |||  |  | ||||||||||||  ||||||| | ||||||||||||||||| || || ||||||||||||||||||    
T  42798746 ccatttggtgtattgtacgcagccttaccttgttttttacacaagagactgtttccaagacttgaacccgtgacc-ttccagtcacatgacaacaacttt 42798648  T
Q  99 atcagttgcgccaaggtta 117  Q
    | |||||||||||||||||    
T  42798647 accagttgcgccaaggtta 42798629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 42805597 - 42805484
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    |||||||||||||| |||| ||| ||| ||||  |||||||| |||||||| ||||||||||||||||||| || || ||||||||||||||||||| ||    
T  42805597 ttggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacc-ttccagtcacatgacaacaactttacca 42805499  T
Q  103 gttgcgccaaggtta 117  Q
    ||| |||||||||||    
T  42805498 gttacgccaaggtta 42805484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 43557545 - 43557432
Alignment:
Q  5 ttggtgtattgtacgcagcattatcc--tattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    ||||||||||||||||||| |||  |  | |||||||||||| |||||||| ||||||||||||| ||||| ||||| ||||||||||||||||||| ||    
T  43557545 ttggtgtattgtacgcagccttactctgttttttacacaagaggctgtttccaggacttgaacccatgacc-tttcagtcacatgacaacaactttacca 43557447  T
Q  103 gttgcgccaaggtta 117  Q
    |||||| ||||||||    
T  43557446 gttgcggcaaggtta 43557432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 11617646 - 11617762
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||||||||||||||||||||  ||| ||| ||||  |||||||| | |||||| |||||||||||| ||||||||| || ||||||||||||||||||    
T  11617646 ccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggttgtttccaggacttgaacctgtgaccttt-cagtcacatgacaacaacttt 11617744  T
Q  99 atcagttgcgccaaggtt 116  Q
    | |||||||||| |||||    
T  11617745 accagttgcgccgaggtt 11617762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 40463953 - 40463836
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    |||||||||||||| |||||||| ||| ||  |||| ||||||||  ||||||||| ||||||||||||||||| || || |||||||||||||||||||    
T  40463953 ccatttggtgtattatacgcagccttacccagtttttacacaagagactgtttctatgacttgaacccgtgacc-ttacagtcacatgacaacaacttta 40463855  T
Q  100 tcagttgcgccaaggttat 118  Q
     | ||||||||||||||||    
T  40463854 ccggttgcgccaaggttat 40463836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 27629711 - 27629596
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    |||||||||||||| |||||| | ||| ||| ||||  |||||||| |||||||| ||||||||||||||||||| ||||  ||| ||||||||||||||    
T  27629711 ccatttggtgtattttacgcaaccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacc-tttcggtcaaatgacaacaacttt 27629613  T
Q  99 atcagttgcgccaaggt 115  Q
    | |||||||||||||||    
T  27629612 accagttgcgccaaggt 27629596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 34626266 - 34626382
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    ||||||||||||||| ||||||| ||| ||| |||| ||||| || |||||||| |||||||||| | ||| ||||| ||||||||||||||||||||||    
T  34626266 ccatttggtgtattgaacgcagccttaccctgtttttacacaggaggctgtttccaggacttgaatctgtggccttt-caatcacatgacaacaacttta 34626364  T
Q  100 tcagttgcgccaaggtta 117  Q
     ||||||||| |||||||    
T  34626365 ccagttgcgctaaggtta 34626382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 42495927 - 42496010
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    ||||| |||||| |||||||| ||||||||||||||||||| ||||| ||| ||||||||||||||| |||||||||||||||||    
T  42495927 ttttatacaagaggctgtttccaggacttgaacccgtgacc-tttcagtcatatgacaacaactttaccagttgcgccaaggtta 42496010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 47716532 - 47716419
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    ||||||||||||||||||| ||| ||| ||||  |||||||| |||||||| ||||||||||||||||||| || || ||||||| ||||||||||  ||    
T  47716532 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacc-ttccagtcacatggcaacaacttttcca 47716434  T
Q  103 gttgcgccaaggtta 117  Q
    |||| ||||||||||    
T  47716433 gttgtgccaaggtta 47716419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 18327077 - 18326994
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaa-tcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    |||||||||||| ||||||||  ||||||||||||||||||||  ||| ||||||||||||||||||| |||||||||||||||||    
T  18327077 ttttacacaagaggctgtttccgggacttgaacccgtgacctt--caagtcacatgacaacaactttaccagttgcgccaaggtta 18326994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 28362203 - 28362316
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcc--tattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||||||||||||||||||||| ||| |   | |||||||||||| || |||||||||||||||||| |||||| |||||  |||||||||||||||||    
T  28362203 ccatttggtgtattgtacgcagccttaccaagttttttacacaagaggcagtttctaggacttgaacctgtgacc-tttcagccacatgacaacaacttt 28362301  T
Q  99 atcagttgcgccaagg 114  Q
    | | ||||||||||||    
T  28362302 a-ccgttgcgccaagg 28362316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 7193127 - 7193045
Alignment:
Q  34 tttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    ||||||||||| | |||||| ||||||||||||||||||| ||||| |||||||||||||||||||  |||| |||||||||||    
T  7193127 tttacacaagaggttgtttcgaggacttgaacccgtgacc-tttcagtcacatgacaacaactttacaagttacgccaaggtta 7193045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 14732927 - 14732997
Alignment:
Q  46 gctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    |||||||| ||||||||||||| |||| |||||| ||||||||||||||||||| |||||||||||||||||    
T  14732927 gctgtttccaggacttgaacccatgac-ttttcagtcacatgacaacaactttaccagttgcgccaaggtta 14732997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 35334874 - 35334992
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    ||||| |||||||||||| |||  ||| ||| ||||  ||| ||  ||||||| ||||||||||| |||||||||  || |||||||||||||||||||     
T  35334874 ccattcggtgtattgtacacagtcttaccctgttttttacacgagactgtttccaggacttgaactcgtgaccttc-cagtcacatgacaacaactttac 35334972  T
Q  101 cagttgcgccaaggttatcc 120  Q
    ||||||||||||||||||||    
T  35334973 cagttgcgccaaggttatcc 35334992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 13805178 - 13805066
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcc-tattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    |||||||||||||||||| |||| ||| || | |||||||| ||| ||| |||| ||||||||||||||| ||| ||||| |||||||||||||||||||    
T  13805178 ccatttggtgtattgtacacagccttacccctgttttacaccagaggctatttccaggacttgaacccgttacc-tttcagtcacatgacaacaacttta 13805080  T
Q  100 tcagttgcgccaagg 114  Q
     || |||||||||||    
T  13805079 cca-ttgcgccaagg 13805066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 29907493 - 29907395
Alignment:
Q  4 tttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatg--acaacaacttta 99  Q
    |||||||||||| ||||||| |||  |||||||  |||||||| |||||||||||||||||||||||||||| ||||| |||||||  ||||||||||||    
T  29907493 tttggtgtattgaacgcagccttacactattttttacacaagaggctgtttctaggacttgaacccgtgacc-tttcagtcacatgatacaacaacttta 29907395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 7794598 - 7794681
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    ||||||| |||| |||||||| ||||||||||||||||||| || || |||||| |||||||||||| ||||||||| |||||||    
T  7794598 ttttacataagaggctgtttccaggacttgaacccgtgacc-ttccagtcacataacaacaactttaccagttgcgctaaggtta 7794681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 18512511 - 18512587
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaacccgtgaccttt 76  Q
    ||||| ||||||||||||||||| ||| |||||||| |||||||| | |||||| ||||||||||||||||||||||    
T  18512511 ccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgtttccaggacttgaacccgtgaccttt 18512587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 19265891 - 19265781
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    ||||||||||||||||||||||| ||| ||| |||| |||||||  ||||| || | ||||||||||||||||| ||||| |||| ||||||||||||||    
T  19265891 ccatttggtgtattgtacgcagccttaccctctttttacacaagcggctgtatccaagacttgaacccgtgacc-tttcagtcacgtgacaacaacttta 19265793  T
Q  100 tcagttgcgccaa 112  Q
     | ||||||||||    
T  19265792 -ccgttgcgccaa 19265781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 21447633 - 21447550
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    |||||||||||| |||||||  | |||||||| ||||||||||  |||| |||||||||||| ||||||||||||||||||||||    
T  21447633 ttttacacaagaggctgttttcaagacttgaatccgtgaccttc-caattacatgacaacaaatttatcagttgcgccaaggtta 21447550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 22699031 - 22699145
Alignment:
Q  4 tttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatc 101  Q
    |||||||||||||||||||  ||| ||| ||||  ||||||||  || |||| ||||||||||||| | |||||| || ||||||||||||||||||| |    
T  22699031 tttggtgtattgtacgcagtcttaccctgttttttacacaagagactatttccaggacttgaacccataaccttt-cagtcacatgacaacaactttacc 22699129  T
Q  102 agttgcgccaaggtta 117  Q
    ||||||| ||||||||    
T  22699130 agttgcgtcaaggtta 22699145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 23419732 - 23419845
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||||||||||||||||||||  ||| ||| ||||  |||||||| |||||||| || ||||||||| |||||||||| | |||||||||| |||||||    
T  23419732 ccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttccagaacttgaacctgtgacctttt-agtcacatgacagcaacttt 23419830  T
Q  99 atcagttgcgccaagg 114  Q
    | | ||||||||||||    
T  23419831 a-ccgttgcgccaagg 23419845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 16341352 - 16341256
Alignment:
Q  4 tttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    |||||||||||||||| ||| ||| ||| ||||  |||||||| ||||||||||| |||||||||||||||| ||||||  |||||| ||||||||||    
T  16341352 tttggtgtattgtacgtagccttaccctgttttttacacaagaggctgtttctagaacttgaacccgtgacc-tttcaaatacatgataacaacttta 16341256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 8149003 - 8149121
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt---acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactt 97  Q
    ||||||||||||||||||||| | ||| ||||||||   |||||||| |  ||||  ||||||||||| |||||| ||| || ||||||||||||||| |    
T  8149003 ccatttggtgtattgtacgcaaccttaccctattttttaacacaagaggtagttttcaggacttgaactcgtgac-tttgcagtcacatgacaacaacat 8149101  T
Q  98 tatcagttgcgccaaggtta 117  Q
    || |||||| ||||||||||    
T  8149102 taccagttgtgccaaggtta 8149121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 5180253 - 5180332
Alignment:
Q  37 acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    |||||||| |||||||| || | |||||||| |||||||| || ||||||||||||||||||| |||||||| ||||||||    
T  5180253 acacaagaggctgtttccagaagttgaacccttgaccttt-cagtcacatgacaacaactttaccagttgcgtcaaggtta 5180332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 48123542 - 48123655
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatt--ttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||||||||||||||| ||||  ||| ||| ||  |||||||||| |||||||| ||||||||||||| ||||| |||||  ||||||| |||||||||    
T  48123542 ccatttggtgtattgtatgcagttttaccctgttatttacacaagaggctgtttccaggacttgaacccatgacc-tttcagacacatgataacaacttt 48123640  T
Q  99 atcagttgcgccaagg 114  Q
    | | ||||||||||||    
T  48123641 a-ccgttgcgccaagg 48123655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 117
Target Start/End: Original strand, 28078237 - 28078306
Alignment:
Q  47 ctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    ||||||||||||||||||||||||||| || || ||||||||||||||||| |  |||||||||| |||||    
T  28078237 ctgtttctaggacttgaacccgtgacc-ttacagtcacatgacaacaacttcacgagttgcgccagggtta 28078306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 12473378 - 12473267
Alignment:
Q  4 tttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatc 101  Q
    |||||||||||||||||| | ||| ||| ||||  |||||||| | |||||  ||||||||||||| ||||||||   || ||||||||||||||||| |    
T  12473378 tttggtgtattgtacgcatccttaccctgtttttgacacaagaggttgtttgcaggacttgaacccatgacctttcagat-acatgacaacaactttacc 12473280  T
Q  102 agttgcgccaagg 114  Q
     ||||||||||||    
T  12473279 ggttgcgccaagg 12473267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 14099064 - 14099163
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcc--tattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||||||||||||||||||||  ||| ||  | |||||||||| | ||| |||| ||||||| ||||| ||||| ||||| ||||||||||||||||||    
T  14099064 ccatttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttcaacccatgacc-tttcagtcacatgacaacaacttt 14099162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 14409081 - 14409180
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcc--tattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||||||||||||||||||||  ||| ||  | |||||||||| | ||| |||| ||||||| ||||| ||||| ||||| ||||||||||||||||||    
T  14409081 ccatttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttcaacccatgacc-tttcagtcacatgacaacaacttt 14409179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 38262255 - 38262330
Alignment:
Q  2 catttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgacctt 75  Q
    |||||||||||||||| ||| ||||| | ||||||  ||||||||  ||||||| |||||||||||||||||||||    
T  38262255 catttggtgtattgtatgcaacattaccatattttttacacaagagactgtttccaggacttgaacccgtgacctt 38262330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 1423972 - 1424085
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    |||||||| |||| ||||||||| ||| ||||  |||||| |  ||||||| |||| ||||| ||||||||||  || |||||| |||||||||||| ||    
T  1423972 ttggtgtagtgtatgcagcattaccctgttttttacacaacagactgtttccaggatttgaatccgtgaccttc-cagtcacataacaacaactttacca 1424070  T
Q  103 gttgcgccaaggtta 117  Q
    |||||||||| ||||    
T  1424071 gttgcgccaaagtta 1424085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 76
Target Start/End: Complemental strand, 7644999 - 7644956
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttt 76  Q
    |||||||||||| |||||||| ||||||||||||||||||||||    
T  7644999 ttttacacaagaggctgtttccaggacttgaacccgtgaccttt 7644956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 31591175 - 31591242
Alignment:
Q  9 tgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttt 76  Q
    ||||||||||||||| |||  || |||||||||||| | |||||| ||||||||||| ||||||||||    
T  31591175 tgtattgtacgcagccttactctgttttacacaagaggttgtttccaggacttgaactcgtgaccttt 31591242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 39123933 - 39123868
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    ||||||||||||  | ||||||||||||||||||||||  | ||||| |||||||||||||||||||    
T  39123933 ttttacacaagagaccgtttctaggacttgaacccgtg-tcgtttcagtcacatgacaacaacttta 39123868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 114
Target Start/End: Original strand, 3469271 - 3469350
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaagg 114  Q
    ||||||||||||   ||||||||||||||||  | ||||||||| || ||||||||||||||||||| | ||||||||||||    
T  3469271 ttttacacaagagaatgtttctaggacttgagtctgtgaccttt-cagtcacatgacaacaacttta-ccgttgcgccaagg 3469350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 7879715 - 7879639
Alignment:
Q  1 ccatttggtgtattgtacgcagcatta--tcctattttacacaagacgctgtttctaggacttgaacccgtgacctt 75  Q
    ||||||||||||||||||||||| |||  |  | ||||||||||||   |||||| |||||||||||||||||||||    
T  7879715 ccatttggtgtattgtacgcagccttaccttgttttttacacaagagattgtttccaggacttgaacccgtgacctt 7879639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 6736966 - 6736868
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcct-attttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    ||||||||||||||||| ||||  ||| | |  ||||| |||||| | |||||  ||||||||||||||||||| ||||| || ||||||||||||||||    
T  6736966 ccatttggtgtattgtatgcagtcttaccttgtttttatacaagaggttgttttgaggacttgaacccgtgacc-tttcagtcgcatgacaacaacttta 6736868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 19266525 - 19266428
Alignment:
Q  3 atttggtgtattgtacgcagcattatcc--tattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    ||||||||||||||||||||| ||| ||  | |||||| ||||  ||| |||  |||||||||||||  |||| ||||| |||||||||||||||||||    
T  19266525 atttggtgtattgtacgcagccttaccctgttttttacgcaagtggctattttcaggacttgaacccacgacc-tttcagtcacatgacaacaacttta 19266428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 35203513 - 35203439
Alignment:
Q  4 tttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttt 76  Q
    |||||| ||||||||||||  ||||||| ||||  ||||||||   |||||| ||||||||||||||||||||||    
T  35203513 tttggtatattgtacgcagtcttatcctgttttttacacaagagaatgtttccaggacttgaacccgtgaccttt 35203439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 32233193 - 32233305
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    |||||||||||| | ||||| || ||| ||| |||| |||||||| | |||||| ||||||||||||| ||||| ||||| |||  ||||||||| |||     
T  32233193 ccatttggtgtaatatacgctgccttaccctgtttttacacaagaggttgtttccaggacttgaacccatgacc-tttcagtcaggtgacaacaa-tttt 32233290  T
Q  100 tcagttgcgccaagg 114  Q
    || ||||||||||||    
T  32233291 tctgttgcgccaagg 32233305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 44123713 - 44123778
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    |||||||||||| |||||||| || |||||||||||| | | ||||| |||||||||| ||||||||    
T  44123713 ttttacacaagaggctgtttccagtacttgaacccgtaatc-tttcagtcacatgacaccaacttta 44123778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 115
Target Start/End: Complemental strand, 5814489 - 5814433
Alignment:
Q  58 acttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggt 115  Q
    ||||||||||||||| ||| ||||||||| |||||||||||| |  ||||||||||||    
T  5814489 acttgaacccgtgac-tttccaatcacataacaacaactttaccgattgcgccaaggt 5814433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 99
Target Start/End: Complemental strand, 22065654 - 22065566
Alignment:
Q  11 tattgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    ||||||| ||||| ||| |||||||| |||||||| | |||||| |  |||||||| | |||| ||||||||||| ||||||||||||||    
T  22065654 tattgtatgcagctttaccctatttttacacaagaggttgtttccaaaacttgaactcatgac-ttttcaatcacgtgacaacaacttta 22065566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 38604603 - 38604550
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcct-attttacacaagacgctgtttc 53  Q
    ||||||||||||||||||||||| ||| |||  |||||||||||| ||||||||    
T  38604603 ccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttc 38604550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 9e-36; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 1347039 - 1346924
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||  |||||||| ||||||||||||||||||| ||||| |||||||||||||||||||     
T  1347039 ccatttggtgtattgtacgcagccttaccctgttttacacaagtggctgtttccaggacttgaacccgtgacc-tttcagtcacatgacaacaactttac 1346941  T
Q  101 cagttgcgccaaggtta 117  Q
    |||||||||||||||||    
T  1346940 cagttgcgccaaggtta 1346924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 1354815 - 1354930
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||| |||||||| |||||||||||| |||||| ||||| |||||||||||||||||||     
T  1354815 ccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgtttccaggacttgaaccagtgacc-tttcagtcacatgacaacaactttac 1354913  T
Q  101 cagttgcgccaaggtta 117  Q
    |||||||||||||||||    
T  1354914 cagttgcgccaaggtta 1354930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 12221979 - 12222088
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    ||||||||||||||||||| ||| ||| ||||  |||||||| |||||||| | ||||||||||||||||| ||||| ||||||||||||||||||| ||    
T  12221979 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaagacttgaacccgtgacc-tttcagtcacatgacaacaactttacca 12222077  T
Q  103 gttgcgccaag 113  Q
    |||||||||||    
T  12222078 gttgcgccaag 12222088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 28007702 - 28007603
Alignment:
Q  2 catttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttca-atcacatgacaacaactttat 100  Q
    |||||||||||||||||||||| | | ||| |||||||||||| ||| |||| |||||||||||||||||||||||||  ||||||||||||||||||||    
T  28007702 catttggtgtattgtacgcagcctgaccctgttttacacaagaggctctttccaggacttgaacccgtgaccttttcatgtcacatgacaacaactttat 28007603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 29355919 - 29356033
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctattt--tacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaa-ctttatc 101  Q
    ||||||||||||||||||| ||| ||| |||  ||||||||| |||||||| ||||||||||||||||||| ||||| ||||||||||||||  |||| |    
T  29355919 ttggtgtattgtacgcagccttaccctgtttcttacacaagaggctgtttccaggacttgaacccgtgacc-tttcagtcacatgacaacaatttttacc 29356017  T
Q  102 agttgcgccaaggtta 117  Q
    ||||| ||||||||||    
T  29356018 agttgtgccaaggtta 29356033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 2166474 - 2166579
Alignment:
Q  5 ttggtgtattgtacgcagcattatcct--attttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    ||||||||||||||||| | |||||||  ||||||||||||| | |||||| ||||||||||||||||||| ||||| |||||| ||||||||||||  |    
T  2166474 ttggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccgtgacc-tttcagtcacataacaacaactttacta 2166572  T
Q  103 gttgcgc 109  Q
    |||||||    
T  2166573 gttgcgc 2166579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 2178107 - 2178212
Alignment:
Q  5 ttggtgtattgtacgcagcattatcct--attttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    ||||||||||||||||| | |||||||  ||||||||||||| | |||||| ||||||||||||||||||| ||||| |||||| ||||||||||||  |    
T  2178107 ttggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccgtgacc-tttcagtcacataacaacaactttacta 2178205  T
Q  103 gttgcgc 109  Q
    |||||||    
T  2178206 gttgcgc 2178212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 3815135 - 3815252
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||||||||||||||||||||   || | ||||||  |||||| |  ||||||| |||||||||||||||||| ||| || ||||||||||||||||||    
T  3815135 ccatttggtgtattgtacgcagtcgtaccatattttttacacaatagtctgtttccaggacttgaacccgtgacattt-cagtcacatgacaacaacttt 3815233  T
Q  99 atcagttgcgccaaggtta 117  Q
    | |||||||||||||||||    
T  3815234 accagttgcgccaaggtta 3815252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 14975172 - 14975258
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggttatcc 120  Q
    |||||||||||| |||||||| |||||||||| ||||||||||  || ||||||||||||||||||| | ||||||||||||||||||    
T  14975172 ttttacacaagaggctgtttccaggacttgaatccgtgaccttc-cagtcacatgacaacaactttaccggttgcgccaaggttatcc 14975258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 8409311 - 8409203
Alignment:
Q  10 gtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgc 107  Q
    |||||||||||||| ||| ||| ||||  |||||||| || ||||| |||||||||| ||||||||||| || |||||| |||||||||||| |||||||    
T  8409311 gtattgtacgcagccttaccctgttttttacacaagaggcagtttccaggacttgaatccgtgaccttt-cagtcacattacaacaactttaccagttgc 8409213  T
Q  108 gccaaggtta 117  Q
    ||||||||||    
T  8409212 gccaaggtta 8409203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 122
Target Start/End: Complemental strand, 12063510 - 12063422
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggttatcctc 122  Q
    ||||| |||||| ||| |||||||||||||||||||||||| ||||| || ||||| |||||||||||||||||| ||||||||| ||||    
T  12063510 ttttatacaagaggctatttctaggacttgaacccgtgacc-tttcagtctcatgataacaactttatcagttgcaccaaggttaccctc 12063422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 108
Target Start/End: Complemental strand, 6024276 - 6024202
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcg 108  Q
    |||||||||||| ||||||||||||| ||||| |||||||| || |||||||||||||||||||||| ||||||||    
T  6024276 ttttacacaagaggctgtttctaggatttgaaaccgtgacc-ttccaatcacatgacaacaactttaccagttgcg 6024202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 117
Target Start/End: Complemental strand, 9161191 - 9161083
Alignment:
Q  9 tgtattgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgc 107  Q
    ||||||||||||||| |||  || |||| |||||||| |||||||| |||||||||||| |||||| ||||| ||||||||||||||||||| |  ||||    
T  9161191 tgtattgtacgcagccttactctgtttttacacaagaggctgtttccaggacttgaacctgtgacc-tttcagtcacatgacaacaactttaccgattgc 9161093  T
Q  108 gccaaggtta 117  Q
    | ||||||||    
T  9161092 gtcaaggtta 9161083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 14553585 - 14553477
Alignment:
Q  4 tttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatc 101  Q
    ||||||||||| ||| |||| ||| ||||||||  |||||||| ||| |||| |||||||||||| |||||||||  | ||||||||||||||||||| |    
T  14553585 tttggtgtattatacacagccttaccctattttttacacaagaagctatttccaggacttgaacctgtgaccttt--agtcacatgacaacaactttacc 14553488  T
Q  102 agttgcgccaa 112  Q
    |||||| ||||    
T  14553487 agttgcaccaa 14553477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 15866137 - 15866212
Alignment:
Q  41 aagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    |||| |||||||| |||| |||||||| |||||||| |||||||||| ||||||||||| |||||| ||||||||||    
T  15866137 aagaggctgtttccaggaattgaacccatgaccttt-caatcacatgccaacaactttaccagttgggccaaggtta 15866212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 33922936 - 33923003
Alignment:
Q  49 gtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    |||||||||||||||||| ||||| |||||| ||| ||||||||||||||| | |||||||||||||||    
T  33922936 gtttctaggacttgaacctgtgac-ttttcagtcaaatgacaacaactttaccggttgcgccaaggtta 33923003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 13905037 - 13905152
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    |||||||||| |||||| ||||| ||| ||| ||||  |||||||| |  ||||  ||||||||| |||||||||||| || ||||||||||||||||||    
T  13905037 ccatttggtgaattgtatgcagccttaccctgttttttacacaagaggtcgttttcaggacttgagcccgtgaccttt-cagtcacatgacaacaacttt 13905135  T
Q  99 atcagttgcgccaaggtt 116  Q
    | | ||||||||||||||    
T  13905136 a-ccgttgcgccaaggtt 13905152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 22967235 - 22967131
Alignment:
Q  13 ttgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgcca 111  Q
    ||||| ||||| |||||||||||| |||||||| | |||||| | |||||||||  ||||||||  || ||||||||||| ||||||||||| ||||| |    
T  22967235 ttgtatgcagccttatcctatttttacacaagaagttgtttccatgacttgaactagtgacctta-cagtcacatgacaataactttatcagatgcgcga 22967137  T
Q  112 aggtta 117  Q
    ||||||    
T  22967136 aggtta 22967131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 117
Target Start/End: Original strand, 23821158 - 23821262
Alignment:
Q  13 ttgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgcca 111  Q
    ||||| ||||| |||||||||||| |||||||| | |||||| | |||||||||  ||||||||  || ||||||||||| ||||||||||| ||||| |    
T  23821158 ttgtatgcagccttatcctatttttacacaagaagttgtttccatgacttgaactagtgacctta-cagtcacatgacaataactttatcagatgcgcga 23821256  T
Q  112 aggtta 117  Q
    ||||||    
T  23821257 aggtta 23821262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 24734676 - 24734593
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    |||||||||||| | |||||| |||| ||||||   |||||||| || ||||||||||||||||||| |||||||||||| ||||    
T  24734676 ttttacacaagaggttgtttcaaggatttgaacttttgaccttt-cagtcacatgacaacaactttaccagttgcgccaatgtta 24734593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 25557799 - 25557743
Alignment:
Q  2 catttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctagga 58  Q
    |||||||||||||||||||||| ||| ||| |||||||||||| |||||||| ||||    
T  25557799 catttggtgtattgtacgcagccttaccctgttttacacaagaggctgtttccagga 25557743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 26097234 - 26097178
Alignment:
Q  2 catttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctagga 58  Q
    |||||||||||||||||||||| ||| ||| |||||||||||| |||||||| ||||    
T  26097234 catttggtgtattgtacgcagccttaccctgttttacacaagaggctgtttccagga 26097178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 113
Target Start/End: Original strand, 19649300 - 19649338
Alignment:
Q  75 tttcaatcacatgacaacaactttatcagttgcgccaag 113  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  19649300 tttcagtcacatgacaacaactttatcagttgcgccaag 19649338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 20400710 - 20400627
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    ||||||||||||   |||||| |  ||||||||| ||||||||| || |||||||||||||||| || || ||||||||||||||    
T  20400710 ttttacacaagagattgtttccataacttgaacctgtgaccttt-cagtcacatgacaacaactataccaattgcgccaaggtta 20400627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 1941932 - 1941815
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||| ||||||||||||||||| ||| ||| ||||  |||||||| | |||||  | ||||| || ||| ||||||  || ||| ||||||||||||||    
T  1941932 ccattcggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttacatgacttcaatccgcgaccttc-cagtcagatgacaacaacttt 1941834  T
Q  99 atcagttgcgccaaggtta 117  Q
    | ||||||| |||||||||    
T  1941833 accagttgcaccaaggtta 1941815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 23240886 - 23240957
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttt 76  Q
    ||||| |||||||||||   ||| ||| |||||||||||| |||||||| |||||||| ||| |||||||||    
T  23240886 ttggtatattgtacgcaaacttaccctgttttacacaagaggctgtttccaggacttgcacctgtgaccttt 23240957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 4136607 - 4136653
Alignment:
Q  31 tattttacacaagacgctgtttctaggacttgaacccgtgacctttt 77  Q
    |||||||||||||| | ||||| ||||||||||||||||||| ||||    
T  4136607 tattttacacaagatgttgtttttaggacttgaacccgtgacatttt 4136653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 18277285 - 18277329
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgacctttt 77  Q
    |||||||||||| |||||||| | || ||||||||||||||||||    
T  18277285 ttttacacaagaggctgtttccaagatttgaacccgtgacctttt 18277329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 9e-36; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 35710388 - 35710273
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    ||||||||||||||| ||||||| ||| |||||||||||||||| |||||||| ||||||||||||||||||| ||||| | |||||||||||||||||     
T  35710388 ccatttggtgtattgaacgcagccttaccctattttacacaagaggctgtttccaggacttgaacccgtgacc-tttcagttacatgacaacaactttac 35710290  T
Q  101 cagttgcgccaaggtta 117  Q
    |||||||||||||||||    
T  35710289 cagttgcgccaaggtta 35710273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 8170042 - 8170157
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    ||||||||||||||||||||||| ||| ||| |||||||||| | |||||||| ||||||||||||||||||| ||||  |||||||||||||||||||     
T  8170042 ccatttggtgtattgtacgcagccttaccctgttttacacaaaaggctgtttccaggacttgaacccgtgacc-tttcggtcacatgacaacaactttac 8170140  T
Q  101 cagttgcgccaaggtta 117  Q
    |||||||||||||||||    
T  8170141 cagttgcgccaaggtta 8170157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 41014395 - 41014279
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    ||||||||||||||||||||||| ||| ||| |||| |||||||| |||||||| ||||||||||||||||||| || || |||||||||||||||||||    
T  41014395 ccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacc-ttccagtcacatgacaacaacttta 41014297  T
Q  100 tcagttgcgccaaggtta 117  Q
     |||||||||||||||||    
T  41014296 ccagttgcgccaaggtta 41014279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 24448967 - 24448850
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||||||||||||||||||||| ||| ||||||||  |||||| | |||||||| |||||||||||||||||||||  || ||||||||||||||||||    
T  24448967 ccatttggtgtattgtacgcagccttaccctattttttacacaaaaggctgtttccaggacttgaacccgtgaccttc-cagtcacatgacaacaacttt 24448869  T
Q  99 atcagttgcgccaaggtta 117  Q
    | |||||||||||||||||    
T  24448868 accagttgcgccaaggtta 24448850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 117
Target Start/End: Original strand, 37024626 - 37024729
Alignment:
Q  13 ttgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaa 112  Q
    ||||||||||| ||| ||| |||||||||||| |||||||| ||||||||||||||||||| ||||| ||||||||||||||||||| ||||||| ||||    
T  37024626 ttgtacgcagccttaccctgttttacacaagaggctgtttccaggacttgaacccgtgacc-tttcagtcacatgacaacaactttaccagttgcaccaa 37024724  T
Q  113 ggtta 117  Q
    |||||    
T  37024725 ggtta 37024729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 38879654 - 38879541
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    ||||||||||||||||||| ||| ||| ||||  | |||||| |||||||| |||||||||||||||||||||| || ||||||||||||||||||| ||    
T  38879654 ttggtgtattgtacgcagccttaccctgttttttatacaagaggctgtttccaggacttgaacccgtgaccttt-cagtcacatgacaacaactttacca 38879556  T
Q  103 gttgcgccaaggtta 117  Q
    |||||||||||||||    
T  38879555 gttgcgccaaggtta 38879541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 43334277 - 43334157
Alignment:
Q  4 tttggtgtattgtacgcagcattatcctatttt---acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    |||||||||||||||||||| ||| ||| ||||   ||||| || |||||||| |||||||||||||||||||||| || |||||||||||||||||||     
T  43334277 tttggtgtattgtacgcagccttaccctgtttttttacacaggaggctgtttccaggacttgaacccgtgaccttt-cagtcacatgacaacaactttac 43334179  T
Q  101 cagttgcgccaaggttatcctc 122  Q
    ||||||||||||||||| ||||    
T  43334178 cagttgcgccaaggttaccctc 43334157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 2838855 - 2838738
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    ||||||||||||||||||||||| ||| ||| |||| |||||||| |||||||||  ||||||| | |||||||||| || |||||||||||||||||||    
T  2838855 ccatttggtgtattgtacgcagccttaccctgtttttacacaagatgctgtttctgagacttgacctcgtgacctttacagtcacatgacaacaacttta 2838756  T
Q  100 tcagttgcgccaaggtta 117  Q
     | |||||||||||||||    
T  2838755 ccggttgcgccaaggtta 2838738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 4619168 - 4619281
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    ||||||||||||||||||| ||| ||| ||||  |||||||| ||| |||| |||||||||||||||||||||  || ||||||||||||||||||| ||    
T  4619168 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctatttccaggacttgaacccgtgaccttc-cagtcacatgacaacaactttacca 4619266  T
Q  103 gttgcgccaaggtta 117  Q
    |||||||||||||||    
T  4619267 gttgcgccaaggtta 4619281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 32703499 - 32703411
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgaca 90  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||| |||||||| ||||||||||||||||||| ||||| ||||||||||    
T  32703499 ccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgtttccaggacttgaacccgtgacc-tttcagtcacatgaca 32703411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 22861758 - 22861841
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    ||||||||||||  ||| |||||||||||||| ||||||||||| || |||||||||||||||||||||||||| ||||||||||    
T  22861758 ttttacacaagagactgcttctaggacttgaatccgtgaccttt-cagtcacatgacaacaactttatcagttgtgccaaggtta 22861841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 27328825 - 27328712
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    ||||||||||||||||||| ||| ||| ||||  ||||||||  ||||||| |||||||||||| |||||| ||||| ||||||||||||||||||| ||    
T  27328825 ttggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccaggacttgaacctgtgacc-tttcagtcacatgacaacaactttacca 27328727  T
Q  103 gttgcgccaaggtta 117  Q
     ||||| ||||||||    
T  27328726 attgcgtcaaggtta 27328712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 1565509 - 1565391
Alignment:
Q  1 ccatttggtgtattgtacgcagcatta---tcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactt 97  Q
    |||||||||| |||||||||||| |||   |  | |||||| ||||| | |||||| |||||||||||||| ||||||| || |||||||||||||||||    
T  1565509 ccatttggtgcattgtacgcagccttaatatgtttttttactcaagaggttgtttccaggacttgaacccgcgaccttt-cagtcacatgacaacaactt 1565411  T
Q  98 tatcagttgcgccaaggtta 117  Q
    || |||||||||||||||||    
T  1565410 taccagttgcgccaaggtta 1565391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 22187359 - 22187245
Alignment:
Q  4 tttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatc 101  Q
    |||||||||||||||||||  ||||| | ||||  |||||||| |||||||| ||||||| |||| |||||| ||||| ||| |||||||||||||||      
T  22187359 tttggtgtattgtacgcagtcttatcatgttttttacacaagaggctgtttccaggacttaaaccggtgacc-tttcagtcaaatgacaacaactttact 22187261  T
Q  102 agttgcgccaaggtta 117  Q
    ||||||||||| ||||    
T  22187260 agttgcgccaaagtta 22187245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 23974823 - 23974741
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    |||||||||||| | |||||| ||||||||||||||||||| || || ||||||||||||||||||| | |||||||||||||||    
T  23974823 ttttacacaagaggttgtttccaggacttgaacccgtgacc-ttccagtcacatgacaacaacttta-ccgttgcgccaaggtta 23974741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 31299669 - 31299592
Alignment:
Q  39 acaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    |||||| ||||||||||||||||||||  ||||||| |  | ||||||||||||||||||| ||||||| |||||||||    
T  31299669 acaagaggctgtttctaggacttgaactagtgacctgta-agtcacatgacaacaactttaccagttgcaccaaggtta 31299592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 7368469 - 7368413
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggactt 61  Q
    ||||||||||||||||||| ||| ||| |||||||||||| |||||||| |||||||    
T  7368469 ttggtgtattgtacgcagccttaccctgttttacacaagaggctgtttccaggactt 7368413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 22600531 - 22600414
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctat--tttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    |||||||||||||||||| |||| ||| ||| |  ||||||||| |   |||||| ||||||||||||||| ||| || || |||||||| |||||||||    
T  22600531 ccatttggtgtattgtacacagccttaccctgtgttttacacaaaatattgtttccaggacttgaacccgtaacc-ttccagtcacatgataacaacttt 22600433  T
Q  99 atcagttgcgccaaggtta 117  Q
    | ||||| || ||||||||    
T  22600432 accagttacgtcaaggtta 22600414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 19143001 - 19143113
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    |||||||||||| |||||||||| ||| ||| |||| |||||||| | |||||| |||||||||||| ||| | |||| | |||| ||||||||| ||||    
T  19143001 ccatttggtgtactgtacgcagccttaccctgtttttacacaagaggttgtttccaggacttgaacctgtggcatttt-agtcacgtgacaacaatttta 19143099  T
Q  100 tcagttgcgccaagg 114  Q
     || |||||||||||    
T  19143100 cca-ttgcgccaagg 19143113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 1850716 - 1850624
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaaca 93  Q
    ||||||| ||||||||||||| | |||| || |||| |||||||| | | ||||  |||||||||||||||||| ||||| |||||||||||||    
T  1850716 ccatttgatgtattgtacgcacccttattctgtttttacacaagaggttatttccgggacttgaacccgtgacc-tttcagtcacatgacaaca 1850624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 208989 - 209084
Alignment:
Q  4 tttggtgtattgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    |||||||||||| | ||||| ||| ||| |||| |||||||| | |||| | |||||||||||  |||||||||| | |||||||||||||||||||    
T  208989 tttggtgtattgaatgcagccttaccctgtttttacacaagaggttgttgccaggacttgaacttgtgacctttt-agtcacatgacaacaacttta 209084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 22907923 - 22907999
Alignment:
Q  1 ccatttggtgtattgtacgcagcatta-tcctattttacacaagacgctgtttctaggacttgaacccgtgaccttt 76  Q
    ||||||||||||||||| ||| | ||| ||   |||||||||||| ||||||||| |||||||||||| ||||||||    
T  22907923 ccatttggtgtattgtatgcaaccttactctgtttttacacaagaggctgtttcttggacttgaacccttgaccttt 22907999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 34074654 - 34074717
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactt 97  Q
    |||||||||||| ||||||||||||||||||||  |||||| ||||| |||  ||||||||||||    
T  34074654 ttttacacaagaggctgtttctaggacttgaacttgtgacc-tttcagtcatgtgacaacaactt 34074717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 106
Target Start/End: Original strand, 9794473 - 9794522
Alignment:
Q  55 aggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttg 106  Q
    |||||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  9794473 aggacttgaacccgtgacctttt-gatcacatgacaacaa-tttatcagttg 9794522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 112
Target Start/End: Original strand, 12006392 - 12006500
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaaccc-gtgaccttttcaatcacatgacaacaactttatc 101  Q
    ||||||||||||| | ||| ||| ||||||||  ||| |||| | |||||| || |||||||||| ||||||||| || ||||||||||||||||| | |    
T  12006392 ttggtgtattgtatggagccttaccctattttttacataagaggttgtttccag-acttgaaccccgtgaccttt-cagtcacatgacaacaacttgagc 12006489  T
Q  102 agttgcgccaa 112  Q
    |||||||||||    
T  12006490 agttgcgccaa 12006500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 76
Target Start/End: Complemental strand, 22025586 - 22025543
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttt 76  Q
    |||||||||||| |||||||| ||||||||||||| ||||||||    
T  22025586 ttttacacaagaggctgtttccaggacttgaacccatgaccttt 22025543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 122
Target Start/End: Complemental strand, 30006327 - 30006280
Alignment:
Q  75 tttcaatcacatgacaacaactttatcagttgcgccaaggttatcctc 122  Q
    ||||| |||||||||||||| ||||||||||||||||| |||| ||||    
T  30006327 tttcagtcacatgacaacaaatttatcagttgcgccaatgttaacctc 30006280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 114
Target Start/End: Original strand, 10634253 - 10634317
Alignment:
Q  48 tgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaagg 114  Q
    |||||||||||||||||||| ||||| ||||| |||| |||||||||||| | | ||||||||||||    
T  10634253 tgtttctaggacttgaacccatgacc-tttcagtcacttgacaacaacttca-ccgttgcgccaagg 10634317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 28516526 - 28516591
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    |||||||||||| | |||||| | ||||||||||||||||| |||||  ||| ||||||||||||||    
T  28516526 ttttacacaagaggatgtttccaagacttgaacccgtgacc-tttcagccacctgacaacaacttta 28516591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 39301163 - 39301087
Alignment:
Q  36 tacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaagg 114  Q
    ||||||||| | |||| | | ||||||||||||||||| ||||| | ||||||||||||||||| | ||||||||||||    
T  39301163 tacacaagaggttgttcccaagacttgaacccgtgacc-tttcagtaacatgacaacaacttta-ccgttgcgccaagg 39301087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 13801831 - 13801895
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaaccc 67  Q
    ||||||||||||||||||| ||| ||| ||||  |||||||| |||| ||| |||||||||||||    
T  13801831 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctgcttccaggacttgaaccc 13801895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 39079882 - 39079937
Alignment:
Q  57 gacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaagg 114  Q
    ||||||||||||||||| ||||  ||||||||||||||||||| | ||||||||||||    
T  39079882 gacttgaacccgtgacc-tttctgtcacatgacaacaacttta-ccgttgcgccaagg 39079937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 117
Target Start/End: Complemental strand, 19438741 - 19438709
Alignment:
Q  85 atgacaacaactttatcagttgcgccaaggtta 117  Q
    ||||||||||||||| |||||||||||||||||    
T  19438741 atgacaacaactttaccagttgcgccaaggtta 19438709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 9e-36; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 7696945 - 7697060
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||  ||||||| ||||||||||||||||||||||| | |||||||||||||||||||     
T  7696945 ccatttggtgtattgtacgcagccttaccctgttttacacaagagactgtttccaggacttgaacccgtgacctttt-agtcacatgacaacaactttac 7697043  T
Q  101 cagttgcgccaaggtta 117  Q
    |||||||||||||||||    
T  7697044 cagttgcgccaaggtta 7697060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 1217187 - 1217072
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||| |||||||| ||||||||||||||||||| ||||| | ||||||| |||||||||     
T  1217187 ccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgtttccaggacttgaacccgtgacc-tttcagtgacatgactacaactttac 1217089  T
Q  101 cagttgcgccaaggtta 117  Q
    |||||||||||||||||    
T  1217088 cagttgcgccaaggtta 1217072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 22122975 - 22123090
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||  ||||||| |||||||||||||| |||| ||||| |||||||||||||| ||||     
T  22122975 ccatttggtgtattgtacgcagccttaccctgttttacacaagagactgtttccaggacttgaacccgcgacc-tttcagtcacatgacaacaaatttac 22123073  T
Q  101 cagttgcgccaaggtta 117  Q
    |||| ||||||||||||    
T  22123074 cagtggcgccaaggtta 22123090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 39203613 - 39203498
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    ||||||||||||||||||||| | ||| ||| |||||||||||| |||||||| |||||||||||| |||||| ||||| |||||||||||||||||||     
T  39203613 ccatttggtgtattgtacgcaaccttaccctgttttacacaagaggctgtttcaaggacttgaacctgtgacc-tttcagtcacatgacaacaactttac 39203515  T
Q  101 cagttgcgccaaggtta 117  Q
     ||||| ||||||||||    
T  39203514 aagttgtgccaaggtta 39203498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 8247751 - 8247864
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    ||||||||||||||||| | ||| ||| ||||  |||||||| |||||||| ||||||||||||||||||| ||||| ||||||||||||||||||| ||    
T  8247751 ttggtgtattgtacgcaaccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacc-tttcagtcacatgacaacaactttacca 8247849  T
Q  103 gttgcgccaaggtta 117  Q
    |||||||||||||||    
T  8247850 gttgcgccaaggtta 8247864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 46421099 - 46421212
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    ||||||||||||||||||| ||| ||| ||||  |||||||| |||||||| ||||||||||||||||||| ||| | ||||||||||||||||||| ||    
T  46421099 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacc-tttaagtcacatgacaacaactttacca 46421197  T
Q  103 gttgcgccaaggtta 117  Q
    |||||||||||||||    
T  46421198 gttgcgccaaggtta 46421212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 16735539 - 16735423
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttac-acaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    ||||||||||||||||||||||| ||| ||| |||| | |||||| |||||||| |||||||||||||||||| ||  || |||||||||||||||||||    
T  16735539 ccatttggtgtattgtacgcagccttaccctgtttttctacaagaggctgtttcgaggacttgaacccgtgacgtta-cagtcacatgacaacaacttta 16735441  T
Q  100 tcagttgcgccaaggtta 117  Q
     |||||||||||||||||    
T  16735440 ccagttgcgccaaggtta 16735423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 10870043 - 10870126
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||    
T  10870043 ttttacacaagaggctgtttccaggacttgaacccgtgacc-tttcagtcacatgacaacaactttaccagttgcgccaaggtta 10870126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 13730666 - 13730779
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    |||||||||||||| |||| ||| ||| ||||  |||||||| |||||||| ||||||||||||||||||| || || ||||||||||||||||||| ||    
T  13730666 ttggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacc-ttccagtcacatgacaacaactttacca 13730764  T
Q  103 gttgcgccaaggtta 117  Q
    |||||||||||||||    
T  13730765 gttgcgccaaggtta 13730779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 29366784 - 29366897
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    ||||||||||||||||||| ||| ||| ||||  | |||||| |||||||| ||||||||||||||||||||||| | ||||||||||||||||||| ||    
T  29366784 ttggtgtattgtacgcagccttaccctgttttttatacaagaggctgtttccaggacttgaacccgtgacctttt-agtcacatgacaacaactttacca 29366882  T
Q  103 gttgcgccaaggtta 117  Q
    ||| |||||||||||    
T  29366883 gttacgccaaggtta 29366897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 40272870 - 40272987
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||||||||||||||||||||| ||| ||| ||||  |||||||| | |||||| ||||||||||||| |||||||  || ||||||||||||||||||    
T  40272870 ccatttggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccatgaccttc-cagtcacatgacaacaacttt 40272968  T
Q  99 atcagttgcgccaaggtta 117  Q
    | |||||||||||||||||    
T  40272969 accagttgcgccaaggtta 40272987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 26869805 - 26869696
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    ||||||||||||||||||||||| ||| ||| |||| |||| ||| |||||||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  26869805 ccatttggtgtattgtacgcagccttaccctgtttttacaccagaggctgtttccaggacttgaacctgtgaccttt-cagtcacatgacaacaacttta 26869707  T
Q  100 tcagttgcgcc 110  Q
     ||||||||||    
T  26869706 ccagttgcgcc 26869696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 13628854 - 13628968
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctattt--tacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaac-tttatc 101  Q
    ||||||||||||||||||| ||| ||| |||  ||||||||| |||||||| ||||||||||||||||||| ||||| ||||||||||||||| |||| |    
T  13628854 ttggtgtattgtacgcagccttaccctgtttcttacacaagaggctgtttccaggacttgaacccgtgacc-tttcagtcacatgacaacaacttttacc 13628952  T
Q  102 agttgcgccaaggtta 117  Q
    ||||| ||||||||||    
T  13628953 agttgtgccaaggtta 13628968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 52926277 - 52926385
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    ||||||||||||||||||||||| |||        ||||||||| |||||||| |||||||||||||||||||||  || |||||||||||||||||||     
T  52926277 ccatttggtgtattgtacgcagccttac-------tacacaagaggctgtttccaggacttgaacccgtgaccttc-cagtcacatgacaacaactttac 52926368  T
Q  101 cagttgcgccaaggtta 117  Q
    |||||||||||||||||    
T  52926369 cagttgcgccaaggtta 52926385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 22609864 - 22609749
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    ||||||||||||||||||||||| ||| ||| |||| |||||||| |||||||| | ||||||||||||| ||| || || |||||||||||||||||||    
T  22609864 ccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaagacttgaacccgttacc-ttacagtcacatgacaacaacttta 22609766  T
Q  100 tcagttgcgccaaggtta 117  Q
     | |||||||||||||||    
T  22609765 -ccgttgcgccaaggtta 22609749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 4495722 - 4495839
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||||||||||||||||||||| ||| ||| ||||  |||||| | ||| |||  |||||||||||||||||||||  || ||||||||||||||||||    
T  4495722 ccatttggtgtattgtacgcagccttaccctgttttttacacaataggctattttcaggacttgaacccgtgaccttc-cagtcacatgacaacaacttt 4495820  T
Q  99 atcagttgcgccaaggtta 117  Q
    | ||||||||| |||||||    
T  4495821 accagttgcgcgaaggtta 4495839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 12914093 - 12914210
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    |||||||||||||||||||| || ||| ||| ||||  |||||||| |||||||| |||||||||||  ||||||||| |  |||||| |||||||||||    
T  12914093 ccatttggtgtattgtacgccgccttaccctgttttttacacaagaggctgtttccaggacttgaacttgtgaccttt-cggtcacattacaacaacttt 12914191  T
Q  99 atcagttgcgccaaggtta 117  Q
    | |||||||||||||||||    
T  12914192 accagttgcgccaaggtta 12914210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 34420705 - 34420815
Alignment:
Q  4 tttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatc 101  Q
    |||||||||| ||||||||| ||| ||| ||||  |||||||| |||||||| ||||||||||||||||||| ||||| |||| |||||||||||||| |    
T  34420705 tttggtgtatggtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacc-tttcagtcacgtgacaacaacttta-c 34420802  T
Q  102 agttgcgccaagg 114  Q
     ||||||||||||    
T  34420803 tgttgcgccaagg 34420815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 6411881 - 6411996
Alignment:
Q  2 catttggtgtattgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    |||||||||||||||||||||| ||| ||| |||| |||||||| |||||||  | ||||||||||| |||||| | || | |||||||||||||||||     
T  6411881 catttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttacaagacttgaacccatgacctat-cagttacatgacaacaactttac 6411979  T
Q  101 cagttgcgccaaggtta 117  Q
    |||||||| ||||||||    
T  6411980 cagttgcgtcaaggtta 6411996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 26573222 - 26573113
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    ||||||||||||||||||| ||| ||| ||||  ||||| || |||||||| ||||||||||||||||||| ||||| |||| |||||||||||||| |     
T  26573222 ttggtgtattgtacgcagccttaccctgttttttacacaggaggctgtttccaggacttgaacccgtgacc-tttcagtcacgtgacaacaacttta-cc 26573125  T
Q  103 gttgcgccaagg 114  Q
    ||||||||||||    
T  26573124 gttgcgccaagg 26573113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 31592946 - 31592878
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgt 69  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||| |||||||| |||||||||||||||    
T  31592946 ccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgtttccaggacttgaacccgt 31592878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 9607298 - 9607185
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    |||||||||| |||||||| ||| ||| ||||  || ||||| |||||||| ||||||||||||  |||||||| || |||||||||||||||||||  |    
T  9607298 ttggtgtattctacgcagccttaccctgttttttacgcaagaggctgtttccaggacttgaaccgatgaccttt-cagtcacatgacaacaactttacaa 9607200  T
Q  103 gttgcgccaaggtta 117  Q
    |||||||||||||||    
T  9607199 gttgcgccaaggtta 9607185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 45620890 - 45621000
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctatttt---acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatc 101  Q
    ||||||||||||||||||| ||| ||| ||||   |||||||| |||||||| || |||||||||||||||| ||||| |||| |||||||||||||| |    
T  45620890 ttggtgtattgtacgcagccttaccctgtttttttacacaagaggctgtttccagaacttgaacccgtgacc-tttcagtcacgtgacaacaacttta-c 45620987  T
Q  102 agttgcgccaagg 114  Q
     ||||||||||||    
T  45620988 cgttgcgccaagg 45621000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 5173812 - 5173896
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaac-tttatcagttgcgccaaggtta 117  Q
    |||||||||||| | |||||| ||||||||||||||||||| ||||| ||||||||||||||| ||||  ||||||||||||||||    
T  5173812 ttttacacaagaggttgtttccaggacttgaacccgtgacc-tttcagtcacatgacaacaacttttacgagttgcgccaaggtta 5173896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 26782464 - 26782342
Alignment:
Q  2 catttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    ||||||||||||| ||  |||||||| ||||||||  ||||||||   |||||| |||||||||| |||||||| |||||||| |||||||| |||||||    
T  26782464 catttggtgtattttatacagcattaccctattttttacacaagagattgtttcaaggacttgaatccgtgacc-tttcaatcgcatgacaataacttta 26782366  T
Q  100 tcagttgcgccaaggttatcctca 123  Q
     || ||||| |||||||| |||||    
T  26782365 ccaattgcgtcaaggttaccctca 26782342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 30928239 - 30928302
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactt 97  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||| ||||||||||| |||||    
T  30928239 ttttacacaagaggctgtttccaggacttgaacccgtgacc-tttcagtcacatgacaagaactt 30928302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 45948900 - 45949012
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgacctt--ttcaatcacatgacaacaactttat 100  Q
    ||||||||||||| ||||| ||| ||||||||  |||||||| | |||||| |||| ||||||||||||||||  |||| |||||||| |||||||| |     
T  45948900 ttggtgtattgtatgcagccttaccctattttttacacaagaggttgtttccaggaattgaacccgtgaccttccttcagtcacatgaaaacaacttca- 45948998  T
Q  101 cagttgcgccaagg 114  Q
    | ||||||||||||    
T  45948999 ccgttgcgccaagg 45949012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 516474 - 516417
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaa 91  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||| |||||||||||    
T  516474 ttttacacaagaggctgtttccaggacttgaacccgtgacc-tttcagtcacatgacaa 516417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 10795486 - 10795554
Alignment:
Q  4 tttggtgtattgtacgcagcattatcctat--tttacacaagacgctgtttctaggacttgaacccgtg 70  Q
    |||||||||||||||||||| ||| ||| |  ||||||||||| |||||||| ||||||||||||||||    
T  10795486 tttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 10795554  T

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Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 31831296 - 31831244
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttc 53  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||| ||||||||    
T  31831296 ccatttggtgtattgtatgcagccttaccctattttacacaagaggctgtttc 31831244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 120
Target Start/End: Original strand, 25517312 - 25517351
Alignment:
Q  81 tcacatgacaacaactttatcagttgcgccaaggttatcc 120  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  25517312 tcacatgacaacaactttaccagttgcgccaaggttatcc 25517351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 7943089 - 7942993
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcc--tattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaact 96  Q
    ||||||| ||||||||||||||  ||| ||  | ||||| |||||| |||||||| |||||||||| |||||||| || || ||||||||||||||||    
T  7943089 ccatttgatgtattgtacgcagtcttaccctgttttttagacaagatgctgtttccaggacttgaatccgtgacc-ttccagtcacatgacaacaact 7942993  T

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Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 12525472 - 12525392
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    |||||||||||| |||||||| |||||| ||||| |||||| ||||| ||| |||   ||||||||| |||||||||||||||||    
T  12525472 ttttacacaagaggctgtttccaggactcgaacctgtgacc-tttcagtcatatg---acaactttaccagttgcgccaaggtta 12525392  T

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Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 53062099 - 53062038
Alignment:
Q  37 acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    ||||| || |||||||| ||||||||||| ||||||| ||||| |||||||||||||||||||    
T  53062099 acacaggaggctgtttccaggacttgaacacgtgacc-tttcagtcacatgacaacaacttta 53062038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 114
Target Start/End: Complemental strand, 25944534 - 25944455
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaagg 114  Q
    |||||||| ||| || ||||| ||||||||||||| ||||| ||||| |||| |||||||||||||| | ||||||||||||    
T  25944534 ttttacacgagaggcggtttccaggacttgaacccatgacc-tttcagtcacgtgacaacaacttta-ctgttgcgccaagg 25944455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 114
Target Start/End: Complemental strand, 35417981 - 35417902
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaagg 114  Q
    |||||||||||| |||||||| |||| |||||| ||||||| | ||| |||||||| |||||||||| | ||||||||||||    
T  35417981 ttttacacaagaggctgtttccaggatttgaactcgtgacc-tctcagtcacatgataacaacttta-ccgttgcgccaagg 35417902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 52428537 - 52428613
Alignment:
Q  3 atttggtgtattgtacgcagcattatcc--tattttacacaagacgctgtttctag-gacttgaacccgtgaccttt 76  Q
    ||||||||||||||||||||| ||| ||  |||||||||||||| |||| ||| || ||||| ||||||||||||||    
T  52428537 atttggtgtattgtacgcagccttaccctgtattttacacaagaggctgcttccagagacttaaacccgtgaccttt 52428613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 54032617 - 54032693
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgacctt 75  Q
    ||||| ||||||||||| ||||| ||| ||| ||||  |||||||| | |||||| |||||||||||||||||||||    
T  54032617 ccattcggtgtattgtatgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgacctt 54032693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 14987052 - 14986989
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacc 66  Q
    ||||||||||||||||||| ||| ||| ||||  |||||||| |||||||| ||||||||||||    
T  14987052 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacc 14986989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 15797319 - 15797271
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctg 49  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||| ||||    
T  15797319 ccatttggtgtattgtacgcagccttaccctgttttacacaagaggctg 15797271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 33926176 - 33926105
Alignment:
Q  6 tggtgtattgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaacccgtgaccttt 76  Q
    ||||||||||||| |||| ||| ||| |||| |||||||| ||| |||| ||||||||||||| ||||||||    
T  33926176 tggtgtattgtacacagccttaccctgtttttacacaagaggctatttccaggacttgaacccatgaccttt 33926105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 54374407 - 54374481
Alignment:
Q  4 tttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttt 76  Q
    ||||||| |||||||||||| ||| ||||||||  |||||||| | |||||| | |||||||||| |||||||||    
T  54374407 tttggtggattgtacgcagccttaccctattttttacacaagaggttgtttccaagacttgaacctgtgaccttt 54374481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 19731067 - 19731002
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    |||||||||||| ||| |||| |||||||| | |||||||| |||||||||| ||||||||| ||||    
T  19731067 ttttacacaagaggctatttccaggacttgcatccgtgacc-tttcaatcacgtgacaacaaattta 19731002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 53996627 - 53996723
Alignment:
Q  4 tttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    |||||||||||||| ||||| ||| ||| ||||  |||||||| | |||||| | ||||||||| ||||||| ||||| ||| |||||||||| ||||    
T  53996627 tttggtgtattgtaagcagccttaccctgttttttacacaagaggttgtttccacgacttgaacacgtgacc-tttcagtcaaatgacaacaaattta 53996723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 117
Target Start/End: Complemental strand, 21875038 - 21875002
Alignment:
Q  81 tcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    ||||||||||||||||||| |||||||| ||||||||    
T  21875038 tcacatgacaacaactttaccagttgcgtcaaggtta 21875002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 47624140 - 47624088
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcct-attttacacaagacgctgttt 52  Q
    ||||||||||||||||||||||| ||| |||  |||||||||||| |||||||    
T  47624140 ccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgttt 47624088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 9e-36; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 34725156 - 34725271
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    |||||| |||||||||||||||| ||| ||| |||||||||||| |||||||| ||||||||||||||||||| ||||| |||||||||||||||||||     
T  34725156 ccatttagtgtattgtacgcagccttaccctgttttacacaagaggctgtttccaggacttgaacccgtgacc-tttcagtcacatgacaacaactttac 34725254  T
Q  101 cagttgcgccaaggtta 117  Q
    |||||||||||||||||    
T  34725255 cagttgcgccaaggtta 34725271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 38478340 - 38478455
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||| ||||     
T  38478340 ccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgtttctaggacttgaacccgtgacc-tttcagtcacatgacaacaagtttac 38478438  T
Q  101 cagttgcgccaaggtta 117  Q
     ||||||||||||||||    
T  38478439 tagttgcgccaaggtta 38478455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 32632615 - 32632731
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    ||||||||||||||||||||||| ||| ||| |||| |||||||| |||||||| ||||||||||||||||||| ||||| ||| |||||||||||||||    
T  32632615 ccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacc-tttcagtcatatgacaacaacttta 32632713  T
Q  100 tcagttgcgccaaggtta 117  Q
     |||||||||||||||||    
T  32632714 ccagttgcgccaaggtta 32632731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 45812595 - 45812710
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    ||||||||||||||||| ||||| ||| ||| ||||||||||||  ||||||  |||||||||||| |||||| ||||| ||||||||||||||||||||    
T  45812595 ccatttggtgtattgtatgcagccttaccctcttttacacaagagactgttttcaggacttgaacctgtgacc-tttcagtcacatgacaacaactttat 45812693  T
Q  101 cagttgcgccaaggtta 117  Q
    |||||||||||||||||    
T  45812694 cagttgcgccaaggtta 45812710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 12126897 - 12127010
Alignment:
Q  3 atttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    ||||||||||||||||||||| ||| ||| |||||||||||| |||||||| || |||| ||||||||||| ||||||| |||||||||||||||||  |    
T  12126897 atttggtgtattgtacgcagccttaccctgttttacacaagaagctgtttccagaacttaaacccgtgacc-tttcaattacatgacaacaactttacga 12126995  T
Q  103 gttgcgccaaggtta 117  Q
    |||||||||||||||    
T  12126996 gttgcgccaaggtta 12127010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 19414537 - 19414422
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    ||||||||||||||||||||||| ||| ||| ||||||| |||| ||| |||||||||||||||||||||||| ||||| ||| |||||||||||||||     
T  19414537 ccatttggtgtattgtacgcagccttaacctgttttacataagaggctctttctaggacttgaacccgtgacc-tttcagtcatatgacaacaactttac 19414439  T
Q  101 cagttgcgccaaggtta 117  Q
    || || |||||||||||    
T  19414438 caattacgccaaggtta 19414422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 47214609 - 47214494
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    ||||||||||||||||||||| | ||| ||| ||||| ||||||  ||||||| ||||||||||||||||||| ||||| |||||||||||||||||||     
T  47214609 ccatttggtgtattgtacgcaaccttaccctgttttaaacaagagactgtttccaggacttgaacccgtgacc-tttcagtcacatgacaacaactttac 47214511  T
Q  101 cagttgcgccaaggtta 117  Q
    |||||||||||| ||||    
T  47214510 cagttgcgccaaagtta 47214494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 18944739 - 18944626
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    ||||||||||||||||||| ||| ||| ||||  |||||||| |||||||| ||| |||||||| ||||||||| || ||||||||||||||||||| ||    
T  18944739 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggccttgaacctgtgaccttt-cagtcacatgacaacaactttacca 18944641  T
Q  103 gttgcgccaaggtta 117  Q
    |||||||||||||||    
T  18944640 gttgcgccaaggtta 18944626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 30395790 - 30395903
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    ||||||||||||||||||| ||| ||| ||||  |||||||| |||||||| ||||||||||||||||||| ||  | ||||||||||||||||||| ||    
T  30395790 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacc-ttaaagtcacatgacaacaactttacca 30395888  T
Q  103 gttgcgccaaggtta 117  Q
    |||||||||||||||    
T  30395889 gttgcgccaaggtta 30395903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 14617138 - 14617021
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatt--ttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||||||||||||||||||| | ||| | | ||  |||||||||| |||||||| ||||||||||| |||||||||| || ||||||||||||||||||    
T  14617138 ccatttggtgtattgtacgcaaccttaccttgttatttacacaagaggctgtttccaggacttgaactcgtgaccttt-cagtcacatgacaacaacttt 14617040  T
Q  99 atcagttgcgccaaggtta 117  Q
    | | |||||||||||||||    
T  14617039 accggttgcgccaaggtta 14617021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 46248011 - 46248128
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||||||||||||||||||||  ||| ||| ||||  |||||||| |||||||| | |||||||||||||||| ||| || ||||||||||||||||||    
T  46248011 ccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttccaagacttgaacccgtgacattt-cagtcacatgacaacaacttt 46248109  T
Q  99 atcagttgcgccaaggtta 117  Q
    | |||||| ||||||||||    
T  46248110 accagttgagccaaggtta 46248128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 10668291 - 10668203
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttt---tca-atcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    |||||||||||| |||||||| ||||||||||||||||||||||   ||| |||||||||||||||||||| |||||||||||||||||    
T  10668291 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatcacatgacaacaactttaccagttgcgccaaggtta 10668203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 18724605 - 18724715
Alignment:
Q  3 atttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    |||||||||||||||| |||| ||| ||| ||||  |||||||| |||||||| ||||||||||||||||||| ||||| |||||||||||||||||||     
T  18724605 atttggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacc-tttcagtcacatgacaacaacttta- 18724702  T
Q  101 cagttgcgccaag 113  Q
    | |||||||||||    
T  18724703 ccgttgcgccaag 18724715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 23768378 - 23768501
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||||||||||||||||||||| ||| ||| ||||  |||||||| |||||||| | |||||||||| |||||| || || ||||||||||||||||||    
T  23768378 ccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccatgacttgaacctgtgacc-ttacagtcacatgacaacaacttt 23768476  T
Q  99 atcagttgcgccaaggttatcctca 123  Q
    | |||||||| | |||||| |||||    
T  23768477 accagttgcgtcgaggttaccctca 23768501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 45402160 - 45402078
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    |||||||||||| |||||||| ||||||||||||||| |||||  | |||||||||||||||||||| |||||||||||||||||    
T  45402160 ttttacacaagaggctgtttccaggacttgaacccgttacctt--ccatcacatgacaacaactttaccagttgcgccaaggtta 45402078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 22930159 - 22930242
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    |||||||||| | |||||||| ||||||||||||| |||||||| || ||||||||||||||||||| |||||||||||||||||    
T  22930159 ttttacacaaaaggctgtttccaggacttgaacccatgaccttt-cagtcacatgacaacaactttaccagttgcgccaaggtta 22930242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 20004154 - 20004267
Alignment:
Q  5 ttggtgtattgtacgcagcatta--tcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    ||||||||||||||||||| |||  |  | |||||||| ||| |||||||| ||||||||||||||||||| || || ||||||||||||||||||| ||    
T  20004154 ttggtgtattgtacgcagccttaccttgttttttacacgagaggctgtttccaggacttgaacccgtgacc-ttccagtcacatgacaacaactttacca 20004252  T
Q  103 gttgcgccaaggtta 117  Q
    ||||| |||||||||    
T  20004253 gttgcaccaaggtta 20004267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 35253245 - 35253320
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttt 76  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||| |||||||| ||||||||||||||||| ||||    
T  35253245 ccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgtttcgaggacttgaacccgtgatcttt 35253320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 46991904 - 46991787
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||| |||||||||||| |||| ||| ||| ||||  |||||||| | |||||| ||||||||||||||||||| || || ||||||||||||||||||    
T  46991904 ccattcggtgtattgtacacagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgacc-ttccagtcacatgacaacaacttt 46991806  T
Q  99 atcagttgcgccaaggtta 117  Q
    | ||||||| |||||||||    
T  46991805 accagttgcaccaaggtta 46991787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 117
Target Start/End: Complemental strand, 34714675 - 34714606
Alignment:
Q  47 ctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    ||||||| | |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  34714675 ctgtttccatgacttgaacccgtgaccttt-caatcacatgacaacaactttaccagttgcgccaaggtta 34714606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 41319865 - 41319981
Alignment:
Q  2 catttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    |||||||||||||||||||||| ||| ||| ||||  ||||||||  ||||||| ||||||| |||| ||||||||| || |||||||||||||||||||    
T  41319865 catttggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccaggacttaaacctgtgaccttt-cagtcacatgacaacaacttta 41319963  T
Q  100 tcagttgcgccaaggtta 117  Q
     |||||| | ||||||||    
T  41319964 ccagttgtgtcaaggtta 41319981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 2435848 - 2435958
Alignment:
Q  4 tttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatc 101  Q
    |||||||||||||||||||  ||| ||||||||  ||||| || |||||||| ||||||||||||||||||| ||||| |||| |||||||||||||| |    
T  2435848 tttggtgtattgtacgcaggcttaccctatttttcacacaggaggctgtttccaggacttgaacccgtgacc-tttcagtcacgtgacaacaacttta-c 2435945  T
Q  102 agttgcgccaagg 114  Q
     ||||||||||||    
T  2435946 cgttgcgccaagg 2435958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 25468321 - 25468420
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatccta--ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||||||||||||||||||| | ||| |||   |||||||||||| | |||||| ||||||||||||| ||||| ||||||||||||||||||||||||    
T  25468321 ccatttggtgtattgtacgcaaccttaccctgatttttacacaagaggttgtttccaggacttgaacccatgacc-tttcaatcacatgacaacaacttt 25468419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 27201744 - 27201630
Alignment:
Q  4 tttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatc 101  Q
    |||||||||||||||||||| ||| ||| |||   |||||||| |||||||| ||||||||||||| ||||| ||||| ||||||||||||||||||| |    
T  27201744 tttggtgtattgtacgcagccttaccctgtttctgacacaagaggctgtttccaggacttgaacccatgacc-tttcagtcacatgacaacaactttacc 27201646  T
Q  102 agttgcgccaaggtta 117  Q
    | || ||| |||||||    
T  27201645 atttacgctaaggtta 27201630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 6925200 - 6925096
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||| |||||||||| |||||| ||| ||||||||  |||||||| ||| |||| ||||||||||||||||||| || || ||||||||||||||||||    
T  6925200 ccattcggtgtattgtccgcagccttaccctattttttacacaagaggctatttccaggacttgaacccgtgacc-ttccagtcacatgacaacaacttt 6925102  T
Q  99 atcagt 104  Q
    | ||||    
T  6925101 accagt 6925096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 17470407 - 17470503
Alignment:
Q  4 tttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    |||||||||||||||||||| ||| ||| ||||  |||||||| |||||||||||||||||||||| |||||  |||| |||| ||||||||||||||    
T  17470407 tttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttctaggacttgaacccatgacc-attcagtcacgtgacaacaacttta 17470503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 35117829 - 35117925
Alignment:
Q  4 tttggtgtattgtacgcagcattatcct--attttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    ||||||||||||||| |||| ||| |||  ||||||||||||| ||| |||| ||||||||||||||||||| ||||| |||| ||||||||||||||    
T  35117829 tttggtgtattgtacacagccttaccctgtattttacacaagaggctatttccaggacttgaacccgtgacc-tttcagtcacgtgacaacaacttta 35117925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 11596612 - 11596501
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    |||||||||||||| |||||||| ||| ||| |||| |||||||| | |||||||||||||||||||||||| | ||||| |||||||||| | ||||||    
T  11596612 ccatttggtgtattatacgcagccttaccctgtttttacacaagaggttgtttctaggacttgaacccgtga-catttcagtcacatgacagccacttta 11596514  T
Q  100 tcagttgcgccaag 113  Q
     | |||||||||||    
T  11596513 -ccgttgcgccaag 11596501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 44485167 - 44485280
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatc--ctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||||||||||||||||||||| ||| |   | |||||||||||  | |||||| ||||||  ||||||||||| ||||||||||||||||||||||||    
T  44485167 ccatttggtgtattgtacgcagccttaccatgtcttttacacaagtggttgtttccaggactataacccgtgacc-tttcaatcacatgacaacaacttt 44485265  T
Q  99 atcagttgcgccaagg 114  Q
    | | ||||||||||||    
T  44485266 a-ctgttgcgccaagg 44485280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 117
Target Start/End: Complemental strand, 27474373 - 27474264
Alignment:
Q  8 gtgtattgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttg 106  Q
    |||||||||||||||| ||  ||| |||| ||||||||  ||||||| | |||||||||| ||||||||| || ||||||||||||||||||| ||||||    
T  27474373 gtgtattgtacgcagctttgccctgtttttacacaagagactgtttccaagacttgaacctgtgaccttt-cagtcacatgacaacaactttaccagttg 27474275  T
Q  107 cgccaaggtta 117  Q
     || |||||||    
T  27474274 agctaaggtta 27474264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 33223080 - 33222971
Alignment:
Q  4 tttggtgtattgtacgcagcattatcct-attttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    |||||||||||||||||| | ||  |||  |||||||||||| |||||||| | ||||| || |||||||| ||||| ||||||||||||||||||| |     
T  33223080 tttggtgtattgtacgcaacctttccctgtttttacacaagaggctgtttccatgacttaaatccgtgacc-tttcagtcacatgacaacaactttaccg 33222982  T
Q  103 gttgcgccaag 113  Q
    |||||||||||    
T  33222981 gttgcgccaag 33222971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 117
Target Start/End: Complemental strand, 40424786 - 40424725
Alignment:
Q  55 aggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    |||||||||||||||| ||||| || ||||||||||||||||||| |||||||||||||||||    
T  40424786 aggacttgaacccgtggccttt-cagtcacatgacaacaactttaccagttgcgccaaggtta 40424725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 8197109 - 8197026
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    |||||||||||| ||  || | |||||||||||||||||||||| || ||||||||||||||||| | ||||||| |||||||||    
T  8197109 ttttacacaagaggcaattaccaggacttgaacccgtgaccttt-cagtcacatgacaacaacttgaccagttgcaccaaggtta 8197026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 4430084 - 4430197
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||||||||||||||||||||  ||| ||| ||||  ||||||||  ||||||  | ||||| |||||||||||||  || ||||||||||||||||||    
T  4430084 ccatttggtgtattgtacgcagtcttaccctgttttttacacaagatactgttttcaagacttaaacccgtgaccttc-cagtcacatgacaacaacttt 4430182  T
Q  99 atcagttgcgccaag 113  Q
    | ||| |||||||||    
T  4430183 accagctgcgccaag 4430197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 20036285 - 20036208
Alignment:
Q  34 tttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaag 113  Q
    |||||||||||   |||||| ||||||||||||||||||| ||||| ||||||||||||||||||| || ||||||||||    
T  20036285 tttacacaagagtttgtttccaggacttgaacccgtgacc-tttcagtcacatgacaacaactttacca-ttgcgccaag 20036208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 25290231 - 25290146
Alignment:
Q  33 ttttacacaagacgctgt--ttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    |||||||||||| |||||  ||| | ||||||||| |||||||||| || ||||||||||||||||||| | |||||||||||||||    
T  25290231 ttttacacaagaggctgtgtttccaagacttgaacacgtgaccttt-cagtcacatgacaacaactttacctgttgcgccaaggtta 25290146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 18335347 - 18335463
Alignment:
Q  2 catttggtgtattgtacgcagcattatccta--ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    |||||| ||||||||||||| | ||| ||||  ||||| ||||||  ||||||| ||||||| |||  ||||||||| ||  |||||||||| |||||||    
T  18335347 catttgatgtattgtacgcaactttaccctaatttttaaacaagagactgtttccaggactttaacttgtgaccttt-cagacacatgacaaaaacttta 18335445  T
Q  100 tcagttgcgccaaggtta 117  Q
    ||| ||||||||||||||    
T  18335446 tcacttgcgccaaggtta 18335463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 6983869 - 6983980
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    |||||||||||||||||||||   ||| ||| ||||  | | || |||||||| |||||||||||| |||||| ||||| |||| ||||||||||||||     
T  6983869 ccatttggtgtattgtacgcatacttaccctgttttttatacgaggctgtttccaggacttgaacctgtgacc-tttcagtcacgtgacaacaactttac 6983967  T
Q  101 cagttgcgccaagg 114  Q
    || |||||||||||    
T  6983968 ca-ttgcgccaagg 6983980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 18742080 - 18742136
Alignment:
Q  60 ttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    |||||||| |||||||| || ||||||||||||||||||| |||||||||||||||||    
T  18742080 ttgaacccttgaccttt-cagtcacatgacaacaactttaccagttgcgccaaggtta 18742136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 115
Target Start/End: Original strand, 19932869 - 19932925
Alignment:
Q  58 acttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggt 115  Q
    |||||||||| |||||||| || ||||||||||||||||||| |||||||||||||||    
T  19932869 acttgaacccatgaccttt-cagtcacatgacaacaactttaccagttgcgccaaggt 19932925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 22327165 - 22327101
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    |||||||||||| | |||||| |||||||||||||| |||| ||||| ||||||||||||||||||    
T  22327165 ttttacacaagaggttgtttccaggacttgaacccgcgacc-tttcagtcacatgacaacaacttt 22327101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 9939521 - 9939443
Alignment:
Q  39 acaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaac-tttatcagttgcgccaaggtta 117  Q
    |||||| | |||||| ||||||||||| ||||||| ||||| ||||||||||||||| |||| | |||||||||||||||    
T  9939521 acaagaggttgtttccaggacttgaactcgtgacc-tttcagtcacatgacaacaacttttaccggttgcgccaaggtta 9939443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 50812037 - 50811926
Alignment:
Q  4 tttggtgtattgtacgcagcattatcc---tattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    |||||||||||||||||| | ||| ||   | |||||||||||| |||||||| ||||| |||  |||||||| ||||| |||| ||||||||||||||     
T  50812037 tttggtgtattgtacgcaaccttaccctgtttttttacacaagaagctgtttccaggacatgattccgtgacc-tttcagtcacgtgacaacaacttta- 50811940  T
Q  101 cagttgcgccaagg 114  Q
    | ||||||||||||    
T  50811939 ccgttgcgccaagg 50811926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 2435985 - 2436050
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    ||||||||| || | |||||| ||||||||||||||||||| ||||| |||| ||||||||||||||    
T  2435985 ttttacacaggaggttgtttccaggacttgaacccgtgacc-tttcagtcacgtgacaacaacttta 2436050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 31382272 - 31382330
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcct-attttacacaagacgctgtttctagga 58  Q
    ||||||||||||||||||||||| |||||||  |||||||||||| |||||||| ||||    
T  31382272 ccatttggtgtattgtacgcagccttatcctgtttttacacaagaggctgtttccagga 31382330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 50760288 - 50760383
Alignment:
Q  5 ttggtgtattgtacgcagcattatcctatttta--cacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    |||||||||| |||||||| ||| ||  |||||  ||||||| |||||||  ||||||||||||||||||| | ||| |||||||||||| ||||||    
T  50760288 ttggtgtattatacgcagccttacccagttttatacacaagaggctgttttcaggacttgaacccgtgacc-tctcagtcacatgacaactacttta 50760383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 82 - 117
Target Start/End: Complemental strand, 10163777 - 10163742
Alignment:
Q  82 cacatgacaacaactttatcagttgcgccaaggtta 117  Q
    ||||||||||||||||||||||||||||||| ||||    
T  10163777 cacatgacaacaactttatcagttgcgccaatgtta 10163742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 76
Target Start/End: Complemental strand, 23371190 - 23371147
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttt 76  Q
    |||||| ||||  |||||||||||||||||||||||||||||||    
T  23371190 ttttacccaagtggctgtttctaggacttgaacccgtgaccttt 23371147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 24564444 - 24564327
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    |||||||||| |||||||||| | ||| ||| ||||  |||||||| | |||||| | |||||||| | | ||||||| |||||||| |||| |||||||    
T  24564444 ccatttggtgaattgtacgcacccttaccctgttttttacacaagaggttgtttccaagacttgaatctgcgaccttt-caatcacaagacatcaacttt 24564346  T
Q  99 atcagttgcgccaaggtta 117  Q
    |   |||||||||||||||    
T  24564345 actggttgcgccaaggtta 24564327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 35005220 - 35005146
Alignment:
Q  4 tttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttt 76  Q
    |||||||||||||| ||||| ||| ||| ||||  |||||||| |||||||  | ||||||||||||||||||||    
T  35005220 tttggtgtattgtatgcagccttaccctgttttttacacaagaggctgttttcaagacttgaacccgtgaccttt 35005146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 109
Target Start/End: Complemental strand, 22151568 - 22151495
Alignment:
Q  35 ttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgc 109  Q
    ||||| |||| |||||||| || |||||||||  |||||||  || ||| |||||||||||||||||||||||||    
T  22151568 ttacataagaggctgtttccagaacttgaacctatgacctta-cagtcagatgacaacaactttatcagttgcgc 22151495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 114
Target Start/End: Complemental strand, 19701636 - 19701557
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaagg 114  Q
    |||||||||||| |||||||  | ||||| ||||||||| | ||||| ||||| ||||||||||||| | ||||||||||||    
T  19701636 ttttacacaagaggctgttttcatgacttaaacccgtga-catttcagtcacacgacaacaacttta-ctgttgcgccaagg 19701557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 22324989 - 22324925
Alignment:
Q  4 tttggtgtattgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaaccc 67  Q
    |||||||||||||| ||||| ||| ||| |||| |||||||| |||||||| | |||||||||||    
T  22324989 tttggtgtattgtatgcagccttaccctgtttttacacaagaggctgtttccaagacttgaaccc 22324925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 30654 - 30539
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    |||||||||||||||||||||||  || ||| |||||||||||| |||||||| |||||||||||| |||||| ||||| |||||||||||||||||||     
T  30654 ccatttggtgtattgtacgcagccctaccctgttttacacaagaggctgtttccaggacttgaaccggtgacc-tttcagtcacatgacaacaactttac 30556  T
Q  101 cagttgcgccaaggtta 117  Q
    |||||||||||||||||    
T  30555 cagttgcgccaaggtta 30539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 68; Significance: 2e-30; HSPs: 4)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 122
Target Start/End: Original strand, 10110 - 10228
Alignment:
Q  3 atttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    ||||||||||||||||||||  |||  || |||||||||||| |||||||| ||||||||||||||||||| ||||| ||||||||||||||||||| ||    
T  10110 atttggtgtattgtacgcagtcttactctgttttacacaagaggctgtttccaggacttgaacccgtgacc-tttcagtcacatgacaacaactttacca 10208  T
Q  103 gttgcgccaaggttatcctc 122  Q
    |||||| |||||||| ||||    
T  10209 gttgcgtcaaggttaccctc 10228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 122
Target Start/End: Original strand, 20438 - 20556
Alignment:
Q  3 atttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    ||||||||||||||||||||  |||  || |||||||||||| |||||||| ||||||||||||||||||| ||||| ||||||||||||||||||| ||    
T  20438 atttggtgtattgtacgcagtcttactctgttttacacaagaggctgtttccaggacttgaacccgtgacc-tttcagtcacatgacaacaactttacca 20536  T
Q  103 gttgcgccaaggttatcctc 122  Q
    |||||| |||||||| ||||    
T  20537 gttgcgtcaaggttaccctc 20556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 8964 - 8905
Alignment:
Q  57 gacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    |||||||||| ||||| ||| || ||||||||||||||||| | | |||||||||||||||    
T  8964 gacttgaacctgtgacattt-cagtcacatgacaacaacttcaccggttgcgccaaggtta 8905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 19292 - 19233
Alignment:
Q  57 gacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    |||||||||| ||||| ||| || ||||||||||||||||| | | |||||||||||||||    
T  19292 gacttgaacctgtgacattt-cagtcacatgacaacaacttcaccggttgcgccaaggtta 19233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 1646 - 1758
Alignment:
Q  2 catttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatc 101  Q
    |||||||||||||||| ||||| ||||||| |||||||||||| | |||||  ||||||||||||| ||||| ||||| ||||||||||||||||||| |    
T  1646 catttggtgtattgtatgcagccttatcctgttttacacaagaggttgttttcaggacttgaacccatgacc-tttcagtcacatgacaacaactttacc 1744  T
Q  102 agttgcgccaaggt 115  Q
    | ||||| ||||||    
T  1745 aattgcgtcaaggt 1758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 226463 - 226581
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt---acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactt 97  Q
    ||||||| ||||||||| ||||| ||| ||| ||||   | |||||| ||||||||||||||||||| ||||||||||| || |||||||||||||||||    
T  226463 ccatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgaccttt-cagtcacatgacaacaactt 226561  T
Q  98 tatcagttgcgccaaggtta 117  Q
    || |||||||||||||||||    
T  226562 taccagttgcgccaaggtta 226581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 11206 - 11093
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttat 100  Q
    ||||||||||||||||| ||||| |||   | |||||||||||| |||||||| ||||||||||||||||||| ||||| |||||| | ||||||||||     
T  11206 ccatttggtgtattgtaagcagccttactttgttttacacaagaggctgtttccaggacttgaacccgtgacc-tttcagtcacat-agaacaactttac 11109  T
Q  101 cagttgcgccaaggtt 116  Q
    ||||||||||||||||    
T  11108 cagttgcgccaaggtt 11093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 13082 - 13198
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt-acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    ||||| ||||||||||||||||| ||| | | |||| || ||||| |||||||| |||||||||||| ||||||||| || |||||||||||||||||||    
T  13082 ccattcggtgtattgtacgcagccttaccttgtttttacgcaagaggctgtttccaggacttgaaccggtgaccttt-cagtcacatgacaacaacttta 13180  T
Q  100 tcagttgcgccaaggtta 117  Q
     | |||||||||||||||    
T  13181 ccggttgcgccaaggtta 13198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 46908 - 46794
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||||||||||||||||||| | ||| ||||||||  |||||||| | |||||| || |||||||||||||||||| | | ||||||||||||||||||    
T  46908 ccatttggtgtattgtacgcaaccttaccctattttttacacaagaggttgtttccagcacttgaacccgtgaccttct-agtcacatgacaacaacttt 46810  T
Q  99 atcagttgcgccaagg 114  Q
    | || |||||||||||    
T  46809 accaattgcgccaagg 46794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 24830 - 24942
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||||||||| ||||||||||| ||| ||| ||||  |||||||| ||||||     ||||||||||| |||||||| || ||||||||||||||||||    
T  24830 ccatttggtgtgttgtacgcagccttaccctgttttttacacaagaggctgtt-----gacttgaacccatgaccttt-cagtcacatgacaacaacttt 24923  T
Q  99 atcagttgcgccaaggtta 117  Q
    | |||||||||||||||||    
T  24924 accagttgcgccaaggtta 24942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 43734 - 43672
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttga 63  Q
    ||||||||||||||||||||||| ||| | | ||||||||||||||||||||| || ||||||    
T  43734 ccatttggtgtattgtacgcagccttaccttgttttacacaagacgctgtttccagaacttga 43672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 4230 - 4125
Alignment:
Q  5 ttggtgtattgtacgcagcattatcct--attttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatca 102  Q
    ||||||||||||||||| | |||||||  ||||||||||||| | |||||| ||||||||||||||||||| ||||| |||||| ||||||||||||  |    
T  4230 ttggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccgtgacc-tttcagtcacataacaacaactttacta 4132  T
Q  103 gttgcgc 109  Q
    |||||||    
T  4131 gttgcgc 4125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 59051 - 58937
Alignment:
Q  4 tttggtgtattgtacgcagcattatcctatttt--acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatc 101  Q
    |||||||||||||||||||  ||| ||| ||||  | |||||| |||||||| ||||||||||||||||||| ||||| ||||||||||| || |||| |    
T  59051 tttggtgtattgtacgcagtcttaccctgttttttatacaagaggctgtttccaggacttgaacccgtgacc-tttcagtcacatgacaataagtttacc 58953  T
Q  102 agttgcgccaaggtta 117  Q
    |||||| |||||||||    
T  58952 agttgctccaaggtta 58937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 33 - 109
Target Start/End: Complemental strand, 43172 - 43097
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgc 109  Q
    |||||||||||| |||||||||||||| ||||| ||||||| ||||||||||||||||| ||||||| |||||||||    
T  43172 ttttacacaagaggctgtttctaggacctgaactcgtgacc-tttcaatcacatgacaataactttaccagttgcgc 43097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 35075 - 35197
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt---acacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaa-caact 96  Q
    ||||||||||||||||||||||| ||| ||| ||||   ||||||||  ||||||  ||||||||||||||||||| || || |||||||||||  ||||    
T  35075 ccatttggtgtattgtacgcagccttaccctgttttcacacacaagagactgttttcaggacttgaacccgtgacc-ttacagtcacatgacaataaact 35173  T
Q  97 ttatcagttgcgccaaggttatcc 120  Q
    ||| ||||||| |||| |||||||    
T  35174 ttaccagttgcaccaaagttatcc 35197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 48 - 117
Target Start/End: Complemental strand, 83903 - 83835
Alignment:
Q  48 tgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    |||||| | |||||||||||||||||||| || |||||||||||||||||||  ||||||||||||||||    
T  83903 tgtttccaagacttgaacccgtgaccttt-cagtcacatgacaacaactttactagttgcgccaaggtta 83835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 117
Target Start/End: Complemental strand, 24694 - 24624
Alignment:
Q  46 gctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactttatcagttgcgccaaggtta 117  Q
    |||||||| ||||||||||||||||||| || || |||| ||||||||||||||||| ||| ||||||||||    
T  24694 gctgtttccaggacttgaacccgtgacc-ttacagtcacttgacaacaactttatcaattgtgccaaggtta 24624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 48692 - 48758
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctattttacacaagacgctgtttctaggacttgaaccc 67  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||| |||||||| |  ||||||||||    
T  48692 ccatttggtgtattgtacgcagccttaccctgttttacacaagaggctgtttccaccacttgaaccc 48758  T

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Target: scaffold0311 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 10887 - 10773
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcc--tattttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttt 98  Q
    ||||||||||||||| |||||||  || ||  | |||||||||||| | |||||  ||  ||||||||||||||| || || ||||||||||||||||||    
T  10887 ccatttggtgtattggacgcagccctaccctgttttttacacaagaggttgttttcagaccttgaacccgtgacc-ttccagtcacatgacaacaacttt 10789  T
Q  99 atcagttgcgccaagg 114  Q
    | ||||||| ||||||    
T  10788 accagttgcaccaagg 10773  T

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Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 72925 - 73034
Alignment:
Q  1 ccatttggtgtattgtacgcagcattatcctatttt--acacaagacgct-gtttctaggacttgaacccgtgaccttttcaatcacatgacaacaactt 97  Q
    ||||||||||||||||| ||||| ||| | | ||||  ||||||||  || ||||||||||||||||||||||||         ||||||||||||||||    
T  72925 ccatttggtgtattgtaggcagccttaccgtgttttttacacaagagacttgtttctaggacttgaacccgtgaca--------cacatgacaacaactt 73016  T
Q  98 tatcagttgcgccaaggt 115  Q
    || |||||||||||||||    
T  73017 taccagttgcgccaaggt 73034  T

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Target: scaffold0116 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 8934 - 8869
Alignment:
Q  33 ttttacacaagacgctgtttctaggacttgaacccgtgaccttttcaatcacatgacaacaacttta 99  Q
    |||||||||||| | |||||| |||| ||||||| |||||| || || |||||||||||||||||||    
T  8934 ttttacacaagaagttgtttccaggaattgaacctgtgacc-ttacagtcacatgacaacaacttta 8869  T

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