View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7314_low_8 (Length: 230)

Name: NF7314_low_8
Description: NF7314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7314_low_8
NF7314_low_8
[»] chr7 (63 HSPs)
chr7 (1-213)||(39123869-39124081)
chr7 (1-164)||(40463856-40464013)
chr7 (1-162)||(47716438-47716596)
chr7 (1-163)||(42805503-42805662)
chr7 (1-164)||(21172007-21172163)
chr7 (4-163)||(42391099-42391251)
chr7 (1-163)||(43557451-43557611)
chr7 (1-163)||(32758240-32758395)
chr7 (1-162)||(10693073-10693227)
chr7 (1-151)||(2541030-2541176)
chr7 (1-150)||(33871922-33872065)
chr7 (1-151)||(22698978-22699126)
chr7 (1-163)||(27629613-27629770)
chr7 (1-163)||(42798648-42798805)
chr7 (1-163)||(19265794-19265949)
chr7 (74-163)||(27889315-27889402)
chr7 (1-163)||(34626207-34626363)
chr7 (1-162)||(48735122-48735277)
chr7 (1-161)||(11617589-11617744)
chr7 (28-163)||(7879644-7879774)
chr7 (1-124)||(46354173-46354293)
chr7 (28-149)||(18512466-18512581)
chr7 (1-143)||(28362164-28362301)
chr7 (1-161)||(29907396-29907552)
chr7 (1-147)||(3469190-3469335)
chr7 (1-151)||(35334827-35334970)
chr7 (1-143)||(13805081-13805217)
chr7 (1-161)||(16341257-16341413)
chr7 (8-161)||(18747472-18747621)
chr7 (1-163)||(19426889-19427045)
chr7 (5-163)||(32233134-32233286)
chr7 (75-150)||(45018935-45019012)
chr7 (1-151)||(47077866-47078009)
chr7 (53-142)||(38604558-38604641)
chr7 (2-142)||(28078152-28078286)
chr7 (1-151)||(14732832-14732978)
chr7 (1-162)||(23419674-23419830)
chr7 (1-141)||(19266429-19266564)
chr7 (1-150)||(42476852-42476994)
chr7 (99-163)||(13792149-13792213)
chr7 (75-151)||(21566485-21566560)
chr7 (77-164)||(31591107-31591192)
chr7 (81-137)||(33500569-33500625)
chr7 (1-73)||(42495919-42495991)
chr7 (53-164)||(35787267-35787372)
chr7 (77-162)||(23231609-23231692)
chr7 (1-161)||(11741774-11741927)
chr7 (1-132)||(14099036-14099162)
chr7 (1-132)||(14409053-14409179)
chr7 (1-73)||(18327013-18327085)
chr7 (1-64)||(7193064-7193127)
chr7 (13-151)||(38262207-38262340)
chr7 (28-142)||(35203445-35203556)
chr7 (99-132)||(1408529-1408562)
chr7 (1-162)||(6736869-6737022)
chr7 (119-164)||(25434112-25434157)
chr7 (5-137)||(7644939-7645066)
chr7 (1-144)||(48123502-48123640)
chr7 (111-150)||(42495874-42495913)
chr7 (1-115)||(5180202-5180313)
chr7 (1-66)||(7794597-7794662)
chr7 (115-163)||(36602535-36602583)
chr7 (1-73)||(44123705-44123777)
[»] chr2 (61 HSPs)
chr2 (1-162)||(10543677-10543835)
chr2 (1-163)||(24200622-24200781)
chr2 (1-162)||(14530297-14530455)
chr2 (1-164)||(8455314-8455472)
chr2 (1-166)||(5841007-5841169)
chr2 (1-165)||(9671159-9671317)
chr2 (1-131)||(12023950-12024074)
chr2 (1-163)||(25249737-25249893)
chr2 (1-163)||(17896238-17896396)
chr2 (2-164)||(21779259-21779414)
chr2 (1-163)||(21377073-21377229)
chr2 (13-163)||(14444720-14444864)
chr2 (13-163)||(10546153-10546299)
chr2 (1-150)||(7214513-7214659)
chr2 (1-163)||(17667981-17668138)
chr2 (1-162)||(25079717-25079874)
chr2 (1-162)||(23397745-23397899)
chr2 (38-163)||(36871509-36871627)
chr2 (1-164)||(11514415-11514572)
chr2 (1-162)||(14544042-14544201)
chr2 (1-163)||(17623543-17623700)
chr2 (1-131)||(22371036-22371158)
chr2 (1-159)||(4516354-4516507)
chr2 (89-164)||(23488545-23488620)
chr2 (1-142)||(99285-99419)
chr2 (1-142)||(31158459-31158597)
chr2 (99-164)||(44643595-44643660)
chr2 (77-162)||(40762234-40762317)
chr2 (2-162)||(17380238-17380391)
chr2 (7-151)||(25641487-25641625)
chr2 (1-100)||(29419945-29420045)
chr2 (101-161)||(40579750-40579810)
chr2 (1-125)||(5450264-5450384)
chr2 (11-150)||(19614981-19615116)
chr2 (5-151)||(24859999-24860138)
chr2 (77-163)||(15296405-15296490)
chr2 (1-163)||(27573600-27573756)
chr2 (102-164)||(34080176-34080238)
chr2 (102-148)||(34766330-34766376)
chr2 (1-164)||(39914304-39914462)
chr2 (1-159)||(45235820-45235974)
chr2 (2-150)||(19977726-19977869)
chr2 (77-149)||(24890463-24890533)
chr2 (1-143)||(33795264-33795401)
chr2 (77-138)||(44449407-44449467)
chr2 (82-142)||(19185763-19185823)
chr2 (1-73)||(44604833-44604905)
chr2 (107-150)||(8575975-8576018)
chr2 (81-143)||(32781307-32781367)
chr2 (101-160)||(41409936-41409995)
chr2 (108-162)||(3633708-3633762)
chr2 (114-164)||(22371199-22371249)
chr2 (77-162)||(25632561-25632644)
chr2 (101-142)||(24059016-24059057)
chr2 (99-151)||(26684631-26684683)
chr2 (1-64)||(17705474-17705537)
chr2 (114-151)||(124925-124962)
chr2 (115-163)||(760066-760114)
chr2 (115-163)||(23052964-23053012)
chr2 (1-124)||(23145736-23145854)
chr2 (1-124)||(23557526-23557644)
[»] chr3 (61 HSPs)
chr3 (1-164)||(13628788-13628948)
chr3 (1-165)||(29366717-29366878)
chr3 (1-163)||(26869708-26869864)
chr3 (1-142)||(46421055-46421193)
chr3 (1-163)||(13730601-13730760)
chr3 (1-142)||(8247707-8247845)
chr3 (1-163)||(40272811-40272968)
chr3 (1-163)||(34420642-34420800)
chr3 (1-163)||(5173718-5173876)
chr3 (1-161)||(22609767-22609921)
chr3 (1-164)||(16735442-16735599)
chr3 (1-162)||(39203517-39203671)
chr3 (8-163)||(516417-516570)
chr3 (5-161)||(22122918-22123067)
chr3 (1-163)||(1217091-1217246)
chr3 (28-150)||(10795435-10795554)
chr3 (1-160)||(26573128-26573282)
chr3 (5-163)||(53996564-53996718)
chr3 (77-162)||(45786214-45786299)
chr3 (1-163)||(25944470-25944628)
chr3 (1-152)||(6411832-6411977)
chr3 (77-163)||(54484765-54484849)
chr3 (1-142)||(9607204-9607342)
chr3 (77-160)||(353351-353434)
chr3 (36-151)||(14986993-14987105)
chr3 (77-163)||(34771363-34771447)
chr3 (2-143)||(30928166-30928302)
chr3 (11-161)||(45139479-45139624)
chr3 (77-163)||(49013472-49013558)
chr3 (1-163)||(52926218-52926366)
chr3 (1-91)||(10870021-10870107)
chr3 (29-162)||(31592878-31593004)
chr3 (77-163)||(15797294-15797378)
chr3 (79-165)||(25517167-25517251)
chr3 (1-151)||(7696903-7697041)
chr3 (11-142)||(33926094-33926220)
chr3 (1-165)||(12914032-12914191)
chr3 (53-131)||(47624095-47624167)
chr3 (77-163)||(54374344-54374429)
chr3 (82-151)||(829453-829521)
chr3 (99-163)||(24851300-24851364)
chr3 (77-151)||(45948849-45948921)
chr3 (102-164)||(30452892-30452954)
chr3 (107-164)||(10484614-10484671)
chr3 (98-163)||(44403554-44403619)
chr3 (81-158)||(55401254-55401330)
chr3 (3-149)||(7942993-7943134)
chr3 (7-141)||(12525414-12525543)
chr3 (1-98)||(45620890-45620985)
chr3 (98-164)||(40968611-40968677)
chr3 (114-163)||(47624208-47624257)
chr3 (102-163)||(50624952-50625013)
chr3 (1-73)||(53062039-53062112)
chr3 (1-112)||(4495714-4495820)
chr3 (109-164)||(45416932-45416986)
chr3 (77-142)||(9276338-9276400)
chr3 (99-141)||(46169988-46170030)
chr3 (119-165)||(54032568-54032614)
chr3 (119-163)||(4495675-4495719)
chr3 (99-159)||(35417998-35418058)
chr3 (119-163)||(43956471-43956515)
[»] chr5 (55 HSPs)
chr5 (1-164)||(38879560-38879720)
chr5 (1-163)||(43334181-43334340)
chr5 (1-142)||(27328731-27328869)
chr5 (1-164)||(41014298-41014455)
chr5 (1-164)||(4619102-4619262)
chr5 (9-165)||(32703411-32703560)
chr5 (1-163)||(24448869-24449026)
chr5 (1-163)||(8169983-8170138)
chr5 (5-163)||(19142942-19143094)
chr5 (1-163)||(35710292-35710447)
chr5 (82-162)||(12575660-12575739)
chr5 (31-162)||(13801767-13801895)
chr5 (53-162)||(7097760-7097863)
chr5 (99-164)||(16957386-16957451)
chr5 (1-148)||(2838757-2838899)
chr5 (91-151)||(25622524-25622584)
chr5 (36-151)||(43574620-43574730)
chr5 (77-164)||(29334447-29334533)
chr5 (1-164)||(208925-209083)
chr5 (1-151)||(39301102-39301247)
chr5 (89-161)||(12006329-12006401)
chr5 (77-161)||(20135656-20135740)
chr5 (102-164)||(3771414-3771476)
chr5 (37-151)||(7368413-7368520)
chr5 (77-163)||(12477119-12477204)
chr5 (1-142)||(22600433-22600569)
chr5 (77-162)||(34154814-34154897)
chr5 (89-142)||(10306494-10306546)
chr5 (98-159)||(21784335-21784396)
chr5 (1-164)||(22861667-22861822)
chr5 (1-65)||(37024646-37024710)
chr5 (77-151)||(16880658-16880730)
chr5 (1-162)||(1565410-1565566)
chr5 (1-163)||(28516432-28516590)
chr5 (6-151)||(1850624-1850763)
chr5 (98-163)||(19093884-19093949)
chr5 (103-163)||(16028623-16028683)
chr5 (103-162)||(30877564-30877623)
chr5 (102-165)||(39801591-39801654)
chr5 (77-163)||(11657698-11657783)
chr5 (106-163)||(10943844-10943900)
chr5 (99-140)||(21542489-21542530)
chr5 (1-66)||(23974759-23974824)
chr5 (111-164)||(32354211-32354264)
chr5 (7-114)||(22907913-22908014)
chr5 (98-156)||(4654421-4654479)
chr5 (111-160)||(13774949-13774998)
chr5 (1-66)||(22187264-22187329)
chr5 (102-163)||(24903695-24903756)
chr5 (89-158)||(39079755-39079823)
chr5 (77-151)||(42924841-42924917)
chr5 (89-164)||(24313570-24313645)
chr5 (89-164)||(24355907-24355982)
chr5 (99-151)||(30006397-30006449)
chr5 (2-66)||(34074653-34074717)
[»] chr6 (35 HSPs)
chr6 (5-163)||(29355854-29356009)
chr6 (1-163)||(12221913-12222073)
chr6 (1-163)||(9161102-9161260)
chr6 (1-164)||(1354755-1354911)
chr6 (1-163)||(1346943-1347098)
chr6 (1-163)||(2166409-2166568)
chr6 (1-163)||(2178042-2178201)
chr6 (81-164)||(12885967-12886050)
chr6 (82-163)||(12892064-12892145)
chr6 (77-162)||(7947371-7947455)
chr6 (1-151)||(3815088-3815233)
chr6 (100-163)||(6808468-6808531)
chr6 (1-159)||(13904984-13905135)
chr6 (101-164)||(23930125-23930188)
chr6 (89-151)||(3116140-3116202)
chr6 (102-162)||(10734905-10734965)
chr6 (99-163)||(13267797-13267861)
chr6 (14-162)||(17432332-17432483)
chr6 (1-124)||(6024212-6024332)
chr6 (77-163)||(26097210-26097294)
chr6 (102-162)||(11395836-11395895)
chr6 (1-140)||(14553491-14553626)
chr6 (99-142)||(24097649-24097692)
chr6 (77-132)||(24734694-24734749)
chr6 (77-163)||(25557775-25557859)
chr6 (89-151)||(14975101-14975163)
chr6 (1-66)||(8409222-8409287)
chr6 (1-66)||(14975171-14975236)
chr6 (99-160)||(15866041-15866102)
chr6 (99-142)||(32579497-32579540)
chr6 (77-118)||(2755466-2755507)
chr6 (1-66)||(12063446-12063511)
chr6 (1-162)||(12889405-12889562)
chr6 (1-50)||(33922935-33922984)
chr6 (83-162)||(383760-383837)
[»] chr8 (53 HSPs)
chr8 (1-162)||(13160681-13160836)
chr8 (1-164)||(39460992-39461152)
chr8 (1-151)||(21070708-21070858)
chr8 (1-151)||(20284080-20284229)
chr8 (1-164)||(36720775-36720933)
chr8 (1-163)||(28817625-28817782)
chr8 (1-163)||(35261658-35261815)
chr8 (1-151)||(12670261-12670404)
chr8 (1-161)||(45071244-45071398)
chr8 (1-151)||(7136538-7136685)
chr8 (1-163)||(30454096-30454251)
chr8 (1-143)||(24365078-24365216)
chr8 (1-160)||(44781506-44781662)
chr8 (1-163)||(6760801-6760960)
chr8 (2-151)||(18164771-18164914)
chr8 (1-162)||(17823555-17823711)
chr8 (1-164)||(26954111-26954272)
chr8 (1-164)||(44530128-44530286)
chr8 (40-163)||(20869941-20870061)
chr8 (1-151)||(29521696-29521841)
chr8 (28-163)||(5135289-5135418)
chr8 (1-139)||(20869523-20869652)
chr8 (1-150)||(2626498-2626645)
chr8 (1-163)||(25250501-25250660)
chr8 (77-160)||(29877146-29877227)
chr8 (1-142)||(24245430-24245564)
chr8 (1-164)||(12625868-12626027)
chr8 (5-161)||(42083699-42083851)
chr8 (77-149)||(17250888-17250960)
chr8 (1-73)||(28407395-28407467)
chr8 (1-163)||(8897763-8897920)
chr8 (81-151)||(16225075-16225145)
chr8 (82-151)||(16013511-16013580)
chr8 (106-163)||(40444845-40444902)
chr8 (99-163)||(26102589-26102653)
chr8 (4-164)||(31457155-31457309)
chr8 (77-151)||(5689683-5689755)
chr8 (99-162)||(28407475-28407538)
chr8 (102-151)||(27507985-27508034)
chr8 (77-118)||(43942376-43942417)
chr8 (99-163)||(35107310-35107374)
chr8 (77-151)||(8483949-8484021)
chr8 (5-132)||(11748282-11748406)
chr8 (8-121)||(23000260-23000365)
chr8 (113-163)||(27468091-27468141)
chr8 (77-151)||(44742529-44742602)
chr8 (77-149)||(19729392-19729462)
chr8 (1-125)||(35105902-35106022)
chr8 (77-151)||(26457781-26457851)
chr8 (95-148)||(18595906-18595959)
chr8 (1-66)||(30962864-30962929)
chr8 (28-151)||(389649-389769)
chr8 (101-161)||(36486567-36486627)
[»] chr1 (70 HSPs)
chr1 (1-164)||(30395724-30395884)
chr1 (1-163)||(18944645-18944805)
chr1 (1-148)||(27201649-27201793)
chr1 (1-164)||(34725096-34725252)
chr1 (1-163)||(46247952-46248109)
chr1 (9-143)||(11596523-11596651)
chr1 (13-164)||(10668239-10668387)
chr1 (1-164)||(20004088-20004248)
chr1 (1-164)||(27474283-27474440)
chr1 (1-162)||(35117765-35117924)
chr1 (5-163)||(38478281-38478432)
chr1 (1-150)||(32632569-32632712)
chr1 (15-164)||(35005139-35005285)
chr1 (1-151)||(46991806-46991951)
chr1 (1-150)||(47214513-47214655)
chr1 (1-164)||(14617040-14617198)
chr1 (1-163)||(6925102-6925259)
chr1 (1-159)||(18724549-18724701)
chr1 (1-164)||(19414441-19414597)
chr1 (1-151)||(18741968-18742117)
chr1 (1-164)||(9939463-9939624)
chr1 (1-148)||(23768334-23768476)
chr1 (77-162)||(4349713-4349796)
chr1 (13-151)||(35253198-35253329)
chr1 (1-166)||(41319802-41319962)
chr1 (77-151)||(42304218-42304292)
chr1 (89-163)||(50606488-50606562)
chr1 (1-151)||(45402097-45402243)
chr1 (1-164)||(6983809-6983965)
chr1 (77-132)||(19932783-19932838)
chr1 (1-151)||(2435797-2435943)
chr1 (1-151)||(45812548-45812691)
chr1 (1-163)||(19701572-19701730)
chr1 (31-160)||(22324925-22325049)
chr1 (2-163)||(8197046-8197202)
chr1 (1-163)||(12126836-12126991)
chr1 (77-151)||(31442400-31442473)
chr1 (1-148)||(17470361-17470502)
chr1 (1-163)||(20036222-20036379)
chr1 (1-140)||(25468285-25468419)
chr1 (77-159)||(10378738-10378818)
chr1 (81-163)||(15505643-15505722)
chr1 (40-163)||(31382213-31382330)
chr1 (37-160)||(15511150-15511271)
chr1 (1-127)||(22930104-22930223)
chr1 (77-164)||(20999848-20999933)
chr1 (1-132)||(25290165-25290300)
chr1 (99-163)||(30555210-30555274)
chr1 (1-163)||(50811941-50812099)
chr1 (77-163)||(1517310-1517394)
chr1 (77-163)||(23796540-23796624)
chr1 (1-113)||(33222986-33223093)
chr1 (77-163)||(43768214-43768298)
chr1 (1-143)||(44485128-44485265)
chr1 (102-164)||(33594129-33594191)
chr1 (1-163)||(22327101-22327255)
chr1 (99-151)||(4587574-4587626)
chr1 (99-143)||(30682907-30682951)
chr1 (77-164)||(19974072-19974158)
chr1 (77-159)||(39214961-39215042)
chr1 (89-150)||(45264411-45264471)
chr1 (80-132)||(6358199-6358250)
chr1 (77-163)||(35019305-35019388)
chr1 (108-162)||(25554742-25554796)
chr1 (1-43)||(40424744-40424786)
chr1 (1-66)||(2435984-2436049)
chr1 (1-98)||(50760288-50760382)
chr1 (104-132)||(3060003-3060031)
chr1 (107-163)||(16120819-16120875)
chr1 (115-163)||(50760239-50760287)
[»] chr4 (79 HSPs)
chr4 (1-163)||(5648238-5648394)
chr4 (1-161)||(6430627-6430781)
chr4 (1-164)||(16911541-16911701)
chr4 (2-163)||(54175043-54175201)
chr4 (1-162)||(44363130-44363288)
chr4 (1-163)||(16408600-16408759)
chr4 (1-163)||(30639359-30639515)
chr4 (1-152)||(54730228-54730377)
chr4 (1-163)||(30352579-30352747)
chr4 (1-151)||(40915808-40915952)
chr4 (1-163)||(47528529-47528684)
chr4 (1-163)||(48598824-48598979)
chr4 (1-162)||(20224963-20225117)
chr4 (1-132)||(5306694-5306819)
chr4 (1-163)||(23501772-23501925)
chr4 (1-163)||(11054147-11054302)
chr4 (94-164)||(47482848-47482918)
chr4 (39-163)||(20639657-20639777)
chr4 (1-151)||(21646943-21647090)
chr4 (1-163)||(35567149-35567306)
chr4 (14-160)||(29207900-29208039)
chr4 (2-142)||(17043414-17043549)
chr4 (77-162)||(20225126-20225211)
chr4 (5-163)||(9832312-9832463)
chr4 (77-163)||(20908635-20908720)
chr4 (1-163)||(23580207-23580364)
chr4 (89-163)||(33836486-33836560)
chr4 (3-151)||(19027829-19027972)
chr4 (1-162)||(30690176-30690339)
chr4 (77-164)||(51865036-51865121)
chr4 (1-151)||(47441541-47441686)
chr4 (40-161)||(7909281-7909397)
chr4 (1-159)||(25343166-25343321)
chr4 (8-143)||(25463108-25463238)
chr4 (100-162)||(38755908-38755970)
chr4 (1-163)||(13256398-13256553)
chr4 (28-163)||(47443963-47444093)
chr4 (99-162)||(11394924-11394987)
chr4 (99-162)||(11404651-11404714)
chr4 (77-163)||(25629101-25629185)
chr4 (1-152)||(30496332-30496476)
chr4 (1-142)||(49938613-49938746)
chr4 (1-143)||(32478810-32478941)
chr4 (101-163)||(32484307-32484369)
chr4 (99-164)||(14983906-14983971)
chr4 (101-162)||(40553937-40553998)
chr4 (77-141)||(49796849-49796911)
chr4 (81-149)||(21489143-21489210)
chr4 (79-163)||(36816383-36816466)
chr4 (99-163)||(38786681-38786745)
chr4 (3-151)||(39077807-39077948)
chr4 (5-149)||(41018807-41018945)
chr4 (1-148)||(20405072-20405210)
chr4 (100-163)||(50555655-50555718)
chr4 (100-162)||(25388249-25388311)
chr4 (1-66)||(14590816-14590881)
chr4 (98-159)||(36589815-36589876)
chr4 (1-160)||(487128-487291)
chr4 (1-73)||(17315382-17315454)
chr4 (1-148)||(37494830-37494972)
chr4 (5-73)||(42164232-42164300)
chr4 (5-139)||(7385499-7385628)
chr4 (80-151)||(16494272-16494343)
chr4 (112-163)||(35532077-35532128)
chr4 (7-138)||(32629293-32629418)
chr4 (1-162)||(55766466-55766622)
chr4 (1-143)||(3580859-3580992)
chr4 (102-163)||(19027986-19028047)
chr4 (89-142)||(30581485-30581537)
chr4 (1-142)||(39029080-39029217)
chr4 (101-142)||(44718641-44718682)
chr4 (99-163)||(28494223-28494287)
chr4 (99-159)||(54967092-54967151)
chr4 (77-161)||(8473621-8473705)
chr4 (77-163)||(9987833-9987917)
chr4 (10-164)||(7038041-7038189)
chr4 (81-142)||(2813181-2813242)
chr4 (82-131)||(35894492-35894540)
chr4 (100-132)||(8820581-8820613)
[»] scaffold0168 (1 HSPs)
scaffold0168 (1-163)||(30558-30713)
[»] scaffold0258 (1 HSPs)
scaffold0258 (1-163)||(13023-13179)
[»] scaffold0049 (1 HSPs)
scaffold0049 (8-162)||(58963-59114)
[»] scaffold0057 (4 HSPs)
scaffold0057 (1-163)||(46810-46967)
scaffold0057 (1-148)||(24786-24923)
scaffold0057 (77-164)||(43709-43795)
scaffold0057 (98-142)||(46727-46771)
[»] scaffold0311 (1 HSPs)
scaffold0311 (1-149)||(10789-10932)
[»] scaffold0187 (2 HSPs)
scaffold0187 (1-132)||(10080-10204)
scaffold0187 (1-132)||(20408-20532)
[»] scaffold1176 (1 HSPs)
scaffold1176 (1-150)||(1599-1741)
[»] scaffold0015 (1 HSPs)
scaffold0015 (77-164)||(48632-48717)
[»] scaffold0254 (1 HSPs)
scaffold0254 (1-125)||(4136-4258)
[»] scaffold0180 (1 HSPs)
scaffold0180 (77-151)||(24144-24216)
[»] scaffold0223 (1 HSPs)
scaffold0223 (13-150)||(11122-11252)
[»] scaffold0018 (1 HSPs)
scaffold0018 (28-150)||(72879-72997)
[»] scaffold0954 (1 HSPs)
scaffold0954 (77-162)||(3596-3679)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-66)||(226497-226562)
[»] scaffold0036 (1 HSPs)
scaffold0036 (8-131)||(35048-35167)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-69)||(43108-43176)
[»] scaffold0167 (1 HSPs)
scaffold0167 (99-143)||(23671-23715)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-41)||(83854-83894)


Alignment Details
Target: chr7 (Bit Score: 205; Significance: 1e-112; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 39123869 - 39124081
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39123869 aaagttgttgtcatgtgactgaaacgacacgggttcaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 39123968  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttttaggcccatgtggtgttgtgtatttatgctcttgaaga 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  39123969 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccaagctgcccttttaggcccatgtggtgttgtgtatttatgctcttgaaga 39124068  T
Q  201 gttaacagtatat 213  Q
    |||||||||||||    
T  39124069 gttaacagtatat 39124081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 40463856 - 40464013
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    ||||||||||||||||||||| || | ||||||| |||||| ||||||| ||||||||||||||||| |||||    |||||||||| |||||||||||     
T  40463856 aaagttgttgtcatgtgactgtaaggtcacgggttcaagtcatagaaacagtctcttgtgtaaaaactgggta----aggctgcgtataatacaccaaa- 40463950  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
     ||||||||||||||| ||||||||||||||| ||||||||  |||||||||| ||||||||||    
T  40463951 -tggtgggaccccttctcggaccctgcgtatgcgggagcttcagtgcaccgagttgccctttta 40464013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 47716438 - 47716596
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||| |||||||||| || | ||||||| |||||||| ||||| | |||||||||||||| |||||||    |||||||||| ||||||||||     
T  47716438 aaagttgttgccatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaat 47716533  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
    ||||||||||||||||||||||||| || |||| |||||||||||||||||| | ||||||||    
T  47716534 aatggtgggaccccttcccggaccccgcatatgcgggagctttggtgcaccgggttgcccttt 47716596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 42805503 - 42805662
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||||||||||| || | ||||||| |||||||| ||||| | |||||||||||||| |||||||    |||||| ||| ||||||||||     
T  42805503 aaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgtgtacaatacaccaat 42805598  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||||||||||||||||||| || |||| ||||||||| |||||||| | |||||||||    
T  42805599 aatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgccctttt 42805662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 21172163 - 21172007
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||| ||||||| | ||||||| |||||||| ||||| | ||||||||||||| |||||||    |||||||||| |||||||||||     
T  21172163 aaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa- 21172070  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
     |||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||||    
T  21172069 -tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttta 21172007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 163
Target Start/End: Complemental strand, 42391251 - 42391099
Alignment:
Q  4 gttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatg 103  Q
    ||||||||||||||||||||| | ||||||| |||||||| ||||| |  |||||||||||| |||||||    |||||||||| |||||||||||  ||    
T  42391251 gttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcttcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa--tg 42391159  T
Q  104 gtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||||||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  42391158 gtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 42391099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 43557451 - 43557611
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||||||| | || |||| |||||||| ||||| | |||||||||||||| ||| |||    |||||||||| ||||||||||     
T  43557451 aaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagta----aggctgcgtacaatacaccaat 43557546  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagc-tttggtgcaccgagctgccctttt 163  Q
    |||||||||||||| |||||||| ||||||||| |||||| ||| |||||||| | |||||||||    
T  43557547 aatggtgggaccccctcccggactctgcgtatgcgggagcttttagtgcaccgggttgccctttt 43557611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 32758240 - 32758395
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| | ||| ||| |||||||| ||||| | ||||||||||||| |||||||    |||||| ||| |||||||||||     
T  32758240 aaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaa-cagggta----aggctgtgtacaatacaccaaa- 32758333  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
     |||||||||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  32758334 -tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 32758395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 10693227 - 10693073
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| | ||||||| |||||||| ||||| | |||||||||||||  ||||||    |||||||||| |||||||||||     
T  10693227 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaag-agggta----aggctgcgtacaatacaccaaa- 10693134  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
     |||||||||||||||||||||||||| |||| ||||||| | |||||| | | ||||||||    
T  10693133 -tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcactgggttgcccttt 10693073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 2541176 - 2541030
Alignment:
Q  1 aaagttgttgtcatgtgactg-aaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 98  Q
    ||||||||||||||||||||| ||| | ||||||| |||||||| ||||| | |||||||||||||| |||||||    ||||||||||  |||||||||    
T  2541176 aaagttgttgtcatgtgactggaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtactatacaccaa 2541081  T
Q  99 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    |  ||||||||||||||||||| ||||||||||| ||||||||| ||||||||    
T  2541080 a--tggtgggaccccttcccggtccctgcgtatgcgggagctttagtgcaccg 2541030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 33872065 - 33871922
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| | | ||||| |||||||| |||||   |||||||||||||||||| |    ||||||||||| ||||||||  ||    
T  33872065 aaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaaaaacaggat----aaggctgcgtacaatacacc--aa 33871972  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 150  Q
    |||||||||||||||||| ||||||| ||||| | ||||||| |||||||    
T  33871971 atggtgggaccccttcccagaccctgtgtatgcgagagctttagtgcacc 33871922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 22699126 - 22698978
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||||||| |  | |||| |||||||| ||||  |||||||||||| ||||||||||    ||| ||||||| |||||||||||    
T  22699126 aaagttgttgtcatgtgactgaaaggttatgggttcaagtcctggaaatagtctcttgtgtaaaaaacagggt----aagactgcgtacaatacaccaaa 22699031  T
Q  100 aatggtgggaccc-cttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    |||||||||||||  ||||||||||||| ||||| ||||||| | ||||||||    
T  22699030 aatggtgggacccttttcccggaccctgtgtatgcgggagctatagtgcaccg 22698978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 27629613 - 27629770
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||| |||| |||| | ||||||| |||||||| ||||| | ||||||||| |||||||||||    |||| |||||||||||||||  |    
T  27629613 aaagttgttgtcatttgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggt----aaggttgcgtaaaatacacc--a 27629706  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||||||||||||||| |||||| |||| || |||||  |||||||| | |||||||||    
T  27629707 aatggtgggaccccttcccgggccctgcatatgcggtagcttcagtgcaccgggttgccctttt 27629770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 42798648 - 42798805
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||||||||||| || | ||||||| |||||| | ||||| |||||||||||||||| || ||||    |||||||||| |||||||||||    
T  42798648 aaagttgttgtcatgtgactggaaggtcacgggttcaagtcttggaaacagtctcttgtgtaaaaaacaaggta----aggctgcgtacaatacaccaaa 42798743  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
      ||||||||||| |||||||||||||| |||| ||||||| | ||||| || | |||||||||    
T  42798744 --tggtgggaccctttcccggaccctgcatatgcgggagctatagtgcatcgggttgccctttt 42798805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 19265794 - 19265949
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    ||||||||||||| |||||||||| | ||||||| |||||| | || || | | |||||||||||| |||||    ||||||||||| ||||||||  ||    
T  19265794 aaagttgttgtcacgtgactgaaaggtcacgggttcaagtcttggatacagccgcttgtgtaaaaagagggt----aaggctgcgtacaatacacc--aa 19265887  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||||||||||||||| ||| | |||| ||||||||| |||||||| |||||||||||    
T  19265888 atggtgggaccccttcccgga-cctacatatgtgggagctttagtgcaccgggctgccctttt 19265949  T

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Target: chr7; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 74 - 163
Target Start/End: Complemental strand, 27889402 - 27889315
Alignment:
Q  74 gggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| |||||||||||| ||||| | |||||||||    
T  27889402 gggaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagctttggtacaccgggttgccctttt 27889315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 34626363 - 34626207
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||| ||||| | ||| | | |||||||| ||||| | ||| |||||||||||||||||    |||||||||  |||||||||||     
T  34626363 aaagttgttgtcatgtgattgaaaggccacagattcaagtcctggaaacagcctcctgtgtaaaaacagggta----aggctgcgttcaatacaccaaa- 34626269  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
     |||||||| |||||||||||||||||||||| ||||||||| || || || | |||||||||    
T  34626268 -tggtgggatcccttcccggaccctgcgtatgcgggagctttagttcatcgggttgccctttt 34626207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 48735277 - 48735122
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctag-aaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||||||| | ||||||| |||||||| | ||||   ||||||||||||| || ||||    |||||||||| |||||||||||    
T  48735277 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtccttggaaacaacctcttgtgtaaaa-cacggta----aggctgcgtacaatacaccaaa 48735183  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
      |||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||    
T  48735182 --tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 48735122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 11617744 - 11617589
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||||||| | ||| ||| |||||||| |||||   |||||||||||||| |||||||    || ||||||| |||||||||||    
T  11617744 aaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggta----agactgcgtacaatacaccaaa 11617649  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 161  Q
      |||||||||||||||| ||||||||||||||  ||| |||| |||||||| | |||||||    
T  11617648 --tggtgggaccccttcctggaccctgcgtatgcaggacctttagtgcaccgggttgccctt 11617589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 28 - 163
Target Start/End: Original strand, 7879644 - 7879774
Alignment:
Q  28 cacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctg 126  Q
    ||||||| |||||||| |||||  ||||||||||||||| || ||||    |||||||||| |||||||||||  |||||||||||||||||||||||||    
T  7879644 cacgggttcaagtcctggaaacaatctcttgtgtaaaaaacaaggta----aggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctg 7879737  T
Q  127 cgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||||| ||||||||  |||||||| | |||||||||    
T  7879738 cgtatgcgggagcttcagtgcaccgggttgccctttt 7879774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 46354173 - 46354293
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||| || || | ||||||| |||||||| |||||   |||||||||||||| |||||||    |||||||||| ||||||||||     
T  46354173 aaagttgttgtcatgtgattggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaat 46354268  T
Q  100 aatggtgggaccccttcccggaccc 124  Q
    |||||||||||||||||||||||||    
T  46354269 aatggtgggaccccttcccggaccc 46354293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 149
Target Start/End: Complemental strand, 18512581 - 18512466
Alignment:
Q  28 cacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgc 127  Q
    ||||||| |||||||| |||||    ||||||||||||| ||||||    |||||||||| |||||||| ||  ||||||||||||||||||||||||||    
T  18512581 cacgggttcaagtcctggaaacaacatcttgtgtaaaaatagggta----aggctgcgtacaatacaccgaa--tggtgggaccccttcccggaccctgc 18512488  T
Q  128 gtatgagggagctttggtgcac 149  Q
    ||||| ||||||||||||||||    
T  18512487 gtatgcgggagctttggtgcac 18512466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 28362301 - 28362164
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    ||||||||||||||||| |||||| | ||| ||| |||||||||||||| | ||||||||||||||     | || ||||||||||| ||||||||  ||    
T  28362301 aaagttgttgtcatgtggctgaaaggtcacaggttcaagtcctagaaactgcctcttgtgtaaaaa---acttggtaaggctgcgtacaatacacc--aa 28362207  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttg 143  Q
    |||||||||||||||||| |||| ||| |||| ||||||||||    
T  28362206 atggtgggaccccttcccagaccttgcatatgtgggagctttg 28362164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 29907396 - 29907552
Alignment:
Q  1 aaagttgttgt--catgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaa 98  Q
    |||||||||||  ||||||||||||| | ||||||| |||||||||||||| | |||||||||||||| |  ||  | ||||||||||  ||||||||||    
T  29907396 aaagttgttgtatcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaa-atagt--gtaaggctgcgttcaatacaccaa 29907492  T
Q  99 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 161  Q
    || |||||||||||| |||||||||||  ||||| ||||||||| |||||||| | |||||||    
T  29907493 aa-tggtgggaccccatcccggaccct--gtatgcgggagctttagtgcaccgggttgccctt 29907552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 3469335 - 3469190
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa---cagggtagggaaggctgcgtaaaatacacca 97  Q
    |||||||||||||||||||||||| | ||| |   ||||||||||||||  |||||||||||||||   ||||||| ||     |||||| |||||||||    
T  3469335 aaagttgttgtcatgtgactgaaaggtcacagactcaagtcctagaaacattctcttgtgtaaaaaaaacagggtacggt----tgcgtacaatacacca 3469240  T
Q  98 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgc 147  Q
    ||||||| ||||||||||||  ||||||| ||||| ||||||||| ||||    
T  3469239 aaaatggcgggaccccttcctagaccctgtgtatgcgggagctttagtgc 3469190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 35334970 - 35334827
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    ||||||||||||||||||||| || | |||| || |||||||| ||||| ||||| |||  ||||||||||||    || ||| ||| |||||||| ||     
T  35334970 aaagttgttgtcatgtgactggaaggtcacgagttcaagtcctggaaacagtctcgtgta-aaaaacagggta----agactgtgtacaatacaccgaa- 35334877  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
     |||||||||||||||||||||||||||||||  |||||||| ||||||||    
T  35334876 -tggtgggaccccttcccggaccctgcgtatgcaggagctttagtgcaccg 35334827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 13805081 - 13805217
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| |  |||||| |||||||| ||||  | |||| |||||||| |||||   | ||||||| ||| |||||||||||     
T  13805081 aaagttgttgtcatgtgactgaaaggtaacgggttcaagtcctggaaatagcctctggtgtaaaa-caggg---gtaaggctgtgtacaatacaccaaa- 13805175  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttg 143  Q
     |||||||||| ||||| |||||||||||||| ||||||||||    
T  13805176 -tggtgggaccacttcctggaccctgcgtatgcgggagctttg 13805217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 16341257 - 16341413
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||| ||||||   ||||| | ||||||| ||||| |||||||| | |||||||||||||| |||||||    ||||| |||| |||||||||||    
T  16341257 aaagttgttatcatgtatttgaaaggtcacgggttcaagttctagaaacagcctcttgtgtaaaaaacagggta----aggctacgtacaatacaccaaa 16341352  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 161  Q
    | ||||||| || |||||||||||   | |||| |||||||||||||||||| |||||||||    
T  16341353 a-tggtgggccctcttcccggacctatcatatgcgggagctttggtgcaccgggctgccctt 16341413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 161
Target Start/End: Original strand, 18747472 - 18747621
Alignment:
Q  8 ttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacaccaaaaatggt 105  Q
    |||||| |||||||||| | ||||||  |||||| | ||||| | || |||||||||||  ||||||    ||||||||||| ||||||||  || ||||    
T  18747472 ttgtcacgtgactgaaaggtcacgggatcaagtcttggaaacagccttttgtgtaaaaaagcagggt----aaggctgcgtataatacacc--aattggt 18747565  T
Q  106 gggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 161  Q
    |||||||||||| | |||||||||||| ||||||||| |||||||| |||||||||    
T  18747566 gggaccccttcctgaaccctgcgtatgcgggagctttagtgcaccgggctgccctt 18747621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 19427045 - 19426889
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||||||||| |||| | ||||||| |||||||| ||||| | |||||||||| |||| |||||    ||| ||||||| ||||||||  |    
T  19427045 aaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaatagggt----aagactgcgtacaatacacc--a 19426952  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||||||||| |||||| |||||||||| |||| | ||||||  |||||||| | |||||||||    
T  19426951 aatggtggga-cccttctcggaccctgcatatgcgagagcttcagtgcaccgggttgccctttt 19426889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 163
Target Start/End: Complemental strand, 32233286 - 32233134
Alignment:
Q  5 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatgg 104  Q
    |||||||||  ||||||||| | || |||| |||||||| |||||   |||||||||||||||||||||    |||| ||||| | |||||||||  |||    
T  32233286 ttgttgtcacctgactgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaacagggta----aggcagcgtatattacaccaaa--tgg 32233193  T
Q  105 tgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||||  |||||||  ||||||| |||||||||||||  |||||||| |||||||||||    
T  32233192 tgggattccttcccaaaccctgcatatgagggagcttcagtgcaccgggctgccctttt 32233134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 150
Target Start/End: Complemental strand, 45019012 - 45018935
Alignment:
Q  75 ggaaggctgcgtaaaatacaccaaaaa--tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 150  Q
    ||||||||||||| |||| ||||||||  |||||| |||||||||||||||||||||||| ||||||||| |||||||    
T  45019012 ggaaggctgcgtacaatataccaaaaaactggtggaaccccttcccggaccctgcgtatgcgggagctttagtgcacc 45018935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 47078009 - 47077866
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| | ||||||| |||||||| ||||| ||||||||||| |||| || ||    || | |||||| |||||||  |||    
T  47078009 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagtctcttgtgt-aaaatagagt----aaagttgcgtacaatacac--aaa 47077917  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    ||||||||||||||||||  ||||| | |||| ||||||| | ||||||||    
T  47077916 atggtgggaccccttcccaaaccctacatatgcgggagctctagtgcaccg 47077866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 53 - 142
Target Start/End: Original strand, 38604558 - 38604641
Alignment:
Q  53 ctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagcttt 142  Q
    |||||||||||||||||||||    |||||||||| |||||||||||  ||||| |||||||| |||||||||||||||| |||||||||    
T  38604558 ctcttgtgtaaaaacagggta----aggctgcgtacaatacaccaaa--tggtgagacccctttccggaccctgcgtatgcgggagcttt 38604641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 28078286 - 28078152
Alignment:
Q  2 aagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaa 101  Q
    |||||||||||||||||||| || | ||||||| |||||||||||||| ||||| |||  |||||||||||    |||| ||| |  ||||||||  |||    
T  28078286 aagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagtctcgtgtaaaaaaacagggt----aaggttgcatgcaatacacc--aaa 28078193  T
Q  102 tggtgggaccccttcccggaccctgcgtatgagggagcttt 142  Q
    |||||||||||||||||| | ||||| |||| | |||||||    
T  28078192 tggtgggaccccttcccgaatcctgcatatgcgagagcttt 28078152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 14732978 - 14732832
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||||||| | || |||| |||||||| ||||| | |||   |||||||| |||||||    ||||||||| || |||||||||    
T  14732978 aaagttgttgtcatgtgactgaaaagtcatgggttcaagtcctggaaacagcctcccatgtaaaaaacagggta----aggctgcgtcaa-tacaccaaa 14732884  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    |||||||  || |||||||| ||||||  |||| ||||||||| ||||||||    
T  14732883 aatggtgaaactccttcccgaaccctgtttatgcgggagctttagtgcaccg 14732832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 23419830 - 23419674
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||| |||||||||||| ||| | ||| ||| ||||| || ||||| | |||||||||||||| |||||||    || ||||||| |||||||||||    
T  23419830 aaagttgctgtcatgtgactaaaaggtcacaggttcaagttctggaaacagcctcttgtgtaaaaaacagggta----agactgcgtacaatacaccaaa 23419735  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
      ||||||||||||||||  |||| ||||| || ||| ||||| ||||| || ||||||||||    
T  23419734 --tggtgggaccccttcctagaccttgcgtgtgcgggggctttagtgcatcgggctgcccttt 23419674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 19266429 - 19266564
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||||||| | |  |||| ||||||||  |||  | | |||| ||||||| |||||||    |||||||||| |||||||||||    
T  19266429 aaagttgttgtcatgtgactgaaaggtcgtgggttcaagtcctgaaaatagccacttgcgtaaaaaacagggta----aggctgcgtacaatacaccaaa 19266524  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctt 141  Q
      | |||||| |||||||||||||||||||||| ||||||||    
T  19266525 --ttgtgggatcccttcccggaccctgcgtatgcgggagctt 19266564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 42476852 - 42476994
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||| ||| | ||||| | ||||| || ||||| ||||||||||||||| || ||||    |||||||||| |||||||||||     
T  42476852 aaagttgttgtcatgtgactaaaaggtcacggattcaagttctggaaacagtctcttgtgtaaaa-caaggta----aggctgcgtacaatacaccaaa- 42476945  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 150  Q
     ||||||||||||||||  | | |||| |||| ||||||| | |||||||    
T  42476946 -tggtgggaccccttcctaggctctgcatatgcgggagctctagtgcacc 42476994  T

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Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 13792213 - 13792149
Alignment:
Q  99 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||||| ||||||||||| || ||||||||||||  |||||||| ||||||||||||||||||||    
T  13792213 aaatggcgggaccccttctcgaaccctgcgtatgctggagcttttgtgcaccgagctgccctttt 13792149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 151
Target Start/End: Original strand, 21566485 - 21566560
Alignment:
Q  75 ggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    ||||| ||||||| |||||||||||| |||| ||||||||||||| ||||||| |||| ||||||||| ||||||||    
T  21566485 ggaagactgcgtacaatacaccaaaa-tggtaggaccccttcccgaaccctgcatatgcgggagctttagtgcaccg 21566560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 31591192 - 31591107
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    ||||||||||| ||||||  | ||||||||||||||||||||||||| ||| |||| ||||||| | |||||||| | ||||||||||    
T  31591192 aaggctgcgtacaataca--ataaatggtgggaccccttcccggaccttgcatatgcgggagctctagtgcaccgggttgccctttta 31591107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 33500569 - 33500625
Alignment:
Q  81 ctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgaggga 137  Q
    |||||||  |||||| |||||||||||||||||||||||||||||||||||| ||||    
T  33500569 ctgcgtactatacacaaaaaatggtgggaccccttcccggaccctgcgtatgcggga 33500625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 42495991 - 42495919
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggta 73  Q
    |||||||||||||| ||||||||| | ||||||| |||||||| ||||| | ||||||| |||||||||||||    
T  42495991 aaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaacagggta 42495919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 53 - 164
Target Start/End: Complemental strand, 35787372 - 35787267
Alignment:
Q  53 ctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccga 152  Q
    |||||||||||||||| ||||    ||| |||||| |||||||||||  ||| |||||||||||||||||| |||||||| ||||||||   |||||||     
T  35787372 ctcttgtgtaaaaacatggta----aggttgcgtacaatacaccaaa--tggcgggaccccttcccggaccttgcgtatgcgggagcttcaatgcaccgg 35787279  T
Q  153 gctgccctttta 164  Q
    | ||||||||||    
T  35787278 gttgccctttta 35787267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 162
Target Start/End: Original strand, 23231609 - 23231692
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
    ||||||||||| |||||||| ||  || ||||||||||||||| |||||||||||| || |||||| |||||||||| | ||||||    
T  23231609 aaggctgcgtataatacaccgaa--tgatgggaccccttcccgaaccctgcgtatgcggcagctttagtgcaccgagtttcccttt 23231692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 11741774 - 11741927
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| | || |||| ||||||||  |||| |  ||| ||||||||  ||||||    |||||||||| |||||||||||     
T  11741774 aaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacagcttctagtgtaaaat-agggta----aggctgcgtacaatacaccaaa- 11741867  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 161  Q
     |||||||| |||||||||||  ||||  ||| ||||||| | |||||||| | |||||||    
T  11741868 -tggtgggatcccttcccggattctgcacatgcgggagctctagtgcaccgggttgccctt 11741927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 14099162 - 14099036
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||||||| | || ||||  ||||||| ||||  | || ||||||||||| |||| ||    || ||||||| |||||||||||    
T  14099162 aaagttgttgtcatgtgactgaaaggtcatgggttgaagtcctggaaatagccttttgtgtaaaaaacaggtta----agactgcgtacaatacaccaaa 14099067  T
Q  100 aatggtgggaccccttcccggaccctgcgtatg 132  Q
      |||||||||||||||||| ||||| ||||||    
T  14099066 --tggtgggaccccttcccgaaccctacgtatg 14099036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 14409179 - 14409053
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||||||| | || ||||  ||||||| ||||  | || ||||||||||| |||| ||    || ||||||| |||||||||||    
T  14409179 aaagttgttgtcatgtgactgaaaggtcatgggttgaagtcctggaaatagccttttgtgtaaaaaacaggtta----agactgcgtacaatacaccaaa 14409084  T
Q  100 aatggtgggaccccttcccggaccctgcgtatg 132  Q
      |||||||||||||||||| ||||| ||||||    
T  14409083 --tggtgggaccccttcccgaaccctacgtatg 14409053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 18327013 - 18327085
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggta 73  Q
    ||||||||||||||||||||  || | ||||||| |||||||  ||||| | |||||||||||||||||||||    
T  18327013 aaagttgttgtcatgtgacttgaaggtcacgggttcaagtcccggaaacagcctcttgtgtaaaaacagggta 18327085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 7193064 - 7193127
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaa 64  Q
    |||||||||||||||||||||||| | ||||||| |||||||| |||||   ||||||||||||    
T  7193064 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaa 7193127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 151
Target Start/End: Complemental strand, 38262340 - 38262207
Alignment:
Q  13 atgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaaaaatggtgggacc 111  Q
    ||||||||| || | ||||||| |||||||| ||||| ||||||||||||||||     || || || | ||| || |||||||||||  || |||||||    
T  38262340 atgtgactggaaggtcacgggttcaagtcctggaaacagtctcttgtgtaaaaaa----tatggtaatgttgcatacaatacaccaaa--tgatgggacc 38262247  T
Q  112 ccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    |||||||| || ||||||||| ||||||||| ||||||||    
T  38262246 ccttcccgaacactgcgtatgcgggagctttagtgcaccg 38262207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 142
Target Start/End: Original strand, 35203445 - 35203556
Alignment:
Q  28 cacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctg 126  Q
    ||||||| |||||||| |||||  ||||||||||||||| |||| ||    || ||||||| |||| |||||||||||||||| ||||||| | || ||     
T  35203445 cacgggttcaagtcctggaaacattctcttgtgtaaaaaacaggata----agactgcgtacaatataccaaaaatggtgggatcccttcctgaactcta 35203540  T
Q  127 cgtatgagggagcttt 142  Q
    |||||| |||||||||    
T  35203541 cgtatgcgggagcttt 35203556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 132
Target Start/End: Original strand, 1408529 - 1408562
Alignment:
Q  99 aaatggtgggaccccttcccggaccctgcgtatg 132  Q
    ||||||||||||||||||||||||||||||||||    
T  1408529 aaatggtgggaccccttcccggaccctgcgtatg 1408562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 6736869 - 6737022
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    ||||||||||||||| |||||||| | ||||||| ||||||||  ||||   ||||||| ||||||||    ||| ||| |||| || ||||||||  ||    
T  6736869 aaagttgttgtcatgcgactgaaaggtcacgggttcaagtcctcaaaacaacctcttgtataaaaaca----aggtaagactgcatacaatacacc--aa 6736962  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
    ||||| ||| || |||||||||| |||||| || ||| |||| |||||||| ||||||||||    
T  6736963 atggt-ggagcctttcccggaccttgcgtacgaaggaccttt-gtgcaccgggctgcccttt 6737022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 25434112 - 25434157
Alignment:
Q  119 ggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    |||||||||||||| ||||||||| ||||||||||||| |||||||    
T  25434112 ggaccctgcgtatgcgggagctttagtgcaccgagctgtcctttta 25434157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 137
Target Start/End: Original strand, 7644939 - 7645066
Alignment:
Q  5 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgtaaaatacaccaaaaatg 103  Q
    ||||||| | |||||||||| | ||||||| |||||||| ||||| | ||||||||| |||||||||||    |||   ||||| |||||||| |||||     
T  7644939 ttgttgtaacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggt----aagatagcgtacaatacacc-aaaatt 7645033  T
Q  104 gtgggaccccttcccggaccctgcgtatgaggga 137  Q
    |||||||||||| || ||||||||||||| ||||    
T  7645034 gtgggacccctt-cctgaccctgcgtatgcggga 7645066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 48123640 - 48123502
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaa-aacagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||| ||||||| |||||| | || |||| |||||||| ||||| | |||||||||||| ||||||||    ||  |||| || ||||||||  |    
T  48123640 aaagttgttatcatgtgtctgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaataacagggt----aaaactgcatacaatacacc--a 48123547  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttgg 144  Q
    |||||||||||||||| | ||||| ||| |||| ||||| |||||    
T  48123546 aatggtgggacccctttctggaccatgcatatgcgggaggtttgg 48123502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 150
Target Start/End: Complemental strand, 42495913 - 42495874
Alignment:
Q  111 cccttcccggaccctgcgtatgagggagctttggtgcacc 150  Q
    |||||||||||||||||||||| ||||||||| |||||||    
T  42495913 cccttcccggaccctgcgtatgcgggagctttagtgcacc 42495874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 5180313 - 5180202
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||||||| | || |||| ||| | || ||||| | ||||||||| |||||||||||    ||| ||| ||| || ||||||||    
T  5180313 aaagttgttgtcatgtgactgaaaggtcaagggttcaacttctggaaacagcctcttgtgtcaaaaacagggt----aagactgtgtacaacacaccaaa 5180218  T
Q  100 aatggtgggacccctt 115  Q
    |||| | |||||||||    
T  5180217 aatgattggacccctt 5180202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 7794662 - 7794597
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 66  Q
    ||||||||||| ||||||||| || | ||||||| |||||||| ||||| | ||||| ||||||||    
T  7794662 aaagttgttgttatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttatgtaaaaa 7794597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 36602535 - 36602583
Alignment:
Q  115 tcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||| ||||||||||||| ||||||||| |||||||| | |||||||||    
T  36602535 tcccagaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 36602583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 44123777 - 44123705
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggta 73  Q
    ||||||| ||||||||||||||||    |||||| ||||| || ||||| | |||||||||||||||| ||||    
T  44123777 aaagttggtgtcatgtgactgaaagattacgggttcaagtactggaaacagcctcttgtgtaaaaacaaggta 44123705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 2e-48; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 10543677 - 10543835
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||||||| | ||||||| |||||||| ||||||| |||||||||||||| |||||||    |||||||||| |||||||||||    
T  10543677 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacggcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaaa 10543772  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  10543773 aatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 10543835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 24200781 - 24200622
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||||||| | ||||||| |||||||| ||||| | |||||||||||||| |||||||    |||||||||| |||||||||||    
T  24200781 aaagttgttgtcatgtgactgaaaagtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaaa 24200686  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||||||||| |||||||||||||||| ||||| | ||||||| |||||||| | |||||||||    
T  24200685 aatggtgggaacccttcccggaccctgagtatgtgagagctttagtgcaccgggttgccctttt 24200622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 14530297 - 14530455
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||| |||||| |||||||    ||||| |||| ||||||||||     
T  14530297 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggta----aggctacgtacaatacaccaat 14530392  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  14530393 aatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 14530455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 8455472 - 8455314
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||||||||||| || | ||||||| |||||||| ||||| | ||||||||||||| ||||||||    |||||||||| |||||||||||    
T  8455472 aaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacacagggta----aggctgcgtacaatacaccaaa 8455377  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
      |||||||||||||||||||||||||||||||  |||||||| |||||||| | ||||||||||    
T  8455376 --tggtgggaccccttcccggaccctgcgtatgccggagctttagtgcaccgggttgccctttta 8455314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 5841007 - 5841169
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||||||||||| || | ||||||| |||||||||||||| | || |||||||||||     ||||| |||| |||||| |||||| |||     
T  5841007 aaagttgttgtcatgtgactggaaggtcacgggttcaagtcctagaaacagccttttgtgtaaaaaa----tagggtaaggatgcgtacaatacatcaat 5841102  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttttagg 166  Q
    ||||||||||||||||||||||||| || |||| ||||||||| |||||||||| ||||||||||||    
T  5841103 aatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgagttgcccttttagg 5841169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 9671159 - 9671317
Alignment:
Q  1 aaagttgttgtcatgtgactg-aaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||||||||||| ||| | ||||||| ||| |||| ||||| | ||||||||||||| |||||||    |||||||||| |||||||||||    
T  9671159 aaagttgttgtcatgtgactggaaatgtcacgggttcaaatcctggaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa 9671253  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttttag 165  Q
      ||||||||||||||||||||||||||||||| ||||||||| |||||||| | |||||||||||    
T  9671254 --tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttttag 9671317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 12024074 - 12023950
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||||||||||||    ||||||||||| ||||||||  ||    
T  12024074 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggt----aaggctgcgtacaatacacc--aa 12023981  T
Q  101 atggtgggaccccttcccggaccctgcgtat 131  Q
    ||||||||||||| |||||||||||||||||    
T  12023980 atggtgggaccccctcccggaccctgcgtat 12023950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 25249893 - 25249737
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    ||||||||||||||||||||| || | ||||||| |||||| | ||||| |||||||||||| |||||||||    ||||||||||| ||||||||  ||    
T  25249893 aaagttgttgtcatgtgactgtaaggtcacgggttcaagtcatggaaacagtctcttgtgtacaaacagggt----aaggctgcgtacaatacacc--aa 25249800  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||| ||||||||| |||||||||||| | ||||||| |||||||| | |||||||||    
T  25249799 atggtgggatcccttcccgaaccctgcgtatgcgtgagctttagtgcaccgggttgccctttt 25249737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 17896238 - 17896396
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||||||||| |||| | ||||| | ||||||||||||||   |||||||||||||| |   ||||| ||||||||||| |||| ||||||    
T  17896238 aaagttgttgtcatgtgaccgaaaggtcacggattcaagtcctagaaacaacctcttgtgtaaaaaaa---tagggtaaggctgcgtacaatataccaaa 17896334  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
      ||||||||||||||| ||||||||||||||| ||||||||| ||||| |||| |||||||||    
T  17896335 --tggtgggaccccttctcggaccctgcgtatgtgggagctttagtgcatcgagttgccctttt 17896396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 164
Target Start/End: Complemental strand, 21779414 - 21779259
Alignment:
Q  2 aagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaa 101  Q
    ||||||||||||||||||||||| | ||||||| |||||||| || || | ||||||||||||| |||||||    ||| |||||| |||||||||||      
T  21779414 aagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggagacagcctcttgtgtaaaa-cagggta----aggttgcgtacaatacaccaaa-- 21779322  T
Q  102 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    |||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||||    
T  21779321 tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttta 21779259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 21377229 - 21377073
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||||||| |  ||| || |||||| |||||||   |||||||||||||| |||||||    |||||| ||| ||| |||||||    
T  21377229 aaagttgttgtcatgtgactgaaaggttacgagttcaagtcatagaaacatcctcttgtgtaaaaaacagggta----aggctgggtacaatgcaccaaa 21377134  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
      |||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||    
T  21377133 --tggtgggaccccttcccgaaccctgcgtatgtgggagcttt-gtgcaccgagctgccctttt 21377073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 163
Target Start/End: Original strand, 14444720 - 14444864
Alignment:
Q  13 atgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccc 112  Q
    ||||||||| || | ||||||| |||||||| ||||| | |||||||||||||||||||||    |||||| |||  ||||||||||  |||||||||||    
T  14444720 atgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggta----aggctgtgtacgatacaccaaa--tggtgggaccc 14444813  T
Q  113 cttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||||||||||||||||||| ||||||||| |||||||  | |||||||||    
T  14444814 cttcccggaccctgcgtatgcgggagctttagtgcaccaggttgccctttt 14444864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 13 - 163
Target Start/End: Original strand, 10546153 - 10546299
Alignment:
Q  13 atgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggac 110  Q
    |||||||||||| | ||||||| |||||||| |||||   ||||||| ||||||  |||||||    |||||||||| |||||||||||  |||||||||    
T  10546153 atgtgactgaaaggtcacgggttcaagtcctggaaacatcctcttgtataaaaaaacagggta----aggctgcgtacaatacaccaaa--tggtgggac 10546246  T
Q  111 cccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||||||||||||||||||||| ||||||||| |||||||| | |||||||||    
T  10546247 cccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 10546299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 7214513 - 7214659
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||||||| | || |||| |||||| | ||||| ||||||||||||||| |||||||    ||||||||||| ||||||| |||    
T  7214513 aaagttgttgtcatgtgactgaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaatacagggt----aaggctgcgtacaatacacaaaa 7214608  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 150  Q
    ||||||| || |||||| ||||| ||||||||| | ||| ||| |||||||    
T  7214609 aatggtgagatcccttctcggacactgcgtatgcgagagttttagtgcacc 7214659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 17667981 - 17668138
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||||||||||| || | ||||||| |||||||| ||||    |||||||||||||| |||||||    |||||||||| |||||||||||    
T  17667981 aaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaagaacctcttgtgtaaaaatcagggta----aggctgcgtacaatacaccaaa 17668076  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
      |||||| |||||||| || |||||||||||  ||||||||| |||||||| | |||||||||    
T  17668077 --tggtggaaccccttctcgaaccctgcgtatatgggagctttagtgcaccgggttgccctttt 17668138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 25079874 - 25079717
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    ||||||||||||||||||||| || | ||||||| |||||| |||||||   |||||||||||||| |    ||| |||| |||||| |||||||| ||     
T  25079874 aaagttgttgtcatgtgactggaaggtcacgggttcaagtcttagaaacaacctcttgtgtaaaaaaaca--aggtaaggatgcgtacaatacaccgaa- 25079778  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
     |||||||||||||||||||||||||||||||   ||||||| |||||||| | ||||||||    
T  25079777 -tggtgggaccccttcccggaccctgcgtatgcaagagctttagtgcaccgggttgcccttt 25079717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 23397745 - 23397899
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| | || |||| |||||||| ||||| | |||||||||||||  ||||||    ||||| |||| |||||||||||     
T  23397745 aaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaat-agggta----aggctacgtacaatacaccaaa- 23397838  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
     ||||||||||||||| |||||||| | |||| ||||||| | |||||||| | ||||||||    
T  23397839 -tggtgggaccccttctcggaccctacatatgcgggagctctagtgcaccgggttgcccttt 23397899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 38 - 163
Target Start/End: Original strand, 36871509 - 36871627
Alignment:
Q  38 agtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgaggga 137  Q
    |||||| ||||| | ||||||||| |||||||||||    |||||||||| |||||||||||  |||||||||||||||||||| |||||||||| ||||    
T  36871509 agtcctggaaacagcctcttgtgtgaaaacagggta----aggctgcgtacaatacaccaaa--tggtgggaccccttcccgga-cctgcgtatgcggga 36871601  T
Q  138 gctttggtgcaccgagctgccctttt 163  Q
    ||||| |||||||| | |||||||||    
T  36871602 gctttagtgcaccgggttgccctttt 36871627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 11514415 - 11514572
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||||||||||| || | ||||||| ||| |||| ||||| | |||||||||||||| ||  |||    |||||||||| |||||||||||    
T  11514415 aaagttgttgtcatgtgactggaaggtcacgggttcaactcctggaaacagcctcttgtgtaaaaaacaaagta----aggctgcgtacaatacaccaaa 11514510  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
      ||||||||||| ||||| ||||||||||||| ||||||||| ||||||||   ||||||||||    
T  11514511 --tggtgggaccc-ttcccagaccctgcgtatgcgggagctttagtgcaccggattgccctttta 11514572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 14544042 - 14544201
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta--aaaacagggtagggaaggctgcgtaaaatacaccaa 98  Q
    |||||||||||||||||||||||| |  || |||||| || || ||||| | ||||||||||  |||||||||||    || ||||||  ||||  | ||    
T  14544042 aaagttgttgtcatgtgactgaaaggttacaggtccaggtactggaaacagcctcttgtgtagaaaaacagggta----agactgcgtgcaataaccaaa 14544137  T
Q  99 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
    ||||||| ||||||||||| |||||||||||||| ||||||||| ||||||| || ||||||||    
T  14544138 aaatggtcggaccccttccgggaccctgcgtatgcgggagctttagtgcaccaagttgcccttt 14544201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 17623543 - 17623700
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||||| ||||| || | ||||||| |||||||| |||||   |||||||||||||| ||||||    ||||||||||| ||||||||  |    
T  17623543 aaagttgttgtcatgcgactggaaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaaaatcagggt----aaggctgcgtacaatacacc--a 17623636  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||||||| ||||||||||| | |||||||||| || |||||| |||||| | | |||||||||    
T  17623637 aatggtggaaccccttcccgaatcctgcgtatgtggaagctttagtgcactgggttgccctttt 17623700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 22371036 - 22371158
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||  | | ||||||| |||||||| ||||| | |||  ||||||||||||||||    |||||||||| |||||||||||     
T  22371036 aaagttgttgtcatgtgactgggaggtcacgggttcaagtcctggaaacagcctc--gtgtaaaaacagggta----aggctgcgtacaatacaccaaa- 22371128  T
Q  101 atggtgggaccccttcccggaccctgcgtat 131  Q
     ||||||||||||||||||||||||| ||||    
T  22371129 -tggtgggaccccttcccggaccctgtgtat 22371158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 4516507 - 4516354
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||| |||||||||| | |||   | ||||| |||||||| | |||||||||||||| ||||| |    | |||||||| ||||||||||     
T  4516507 aaagttgttgtcacgtgactgaaaggtcacatattcaagttctagaaacagcctcttgtgtaaaaaacagggca----acgctgcgtacaatacaccaat 4516412  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 159  Q
      ||||||||||||||||||||||||||||||| || |||||| ||| |||| |||||||    
T  4516411 --tggtgggaccccttcccggaccctgcgtatgtggaagctttagtgtaccgggctgccc 4516354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 89 - 164
Target Start/End: Original strand, 23488545 - 23488620
Alignment:
Q  89 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    ||||||| |||||||||||||||||||||||||||||||||||| | ||||||| |||||||| | ||| ||||||    
T  23488545 aatacacaaaaaatggtgggaccccttcccggaccctgcgtatgcgagagctttagtgcaccgggttgctctttta 23488620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 99419 - 99285
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    ||||||||||||| |||||||||| | ||||||| |||||||||||||| | |||||||  |||||||     || ||||||||||| ||||||||  ||    
T  99419 aaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgt-aaaaaaca----tggcaaggctgcgtacaatacacc--aa 99327  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagcttt 142  Q
    ||||||| |||||||| | ||||||| ||||| |||||||||    
T  99326 atggtggaaccccttctcagaccctgtgtatgcgggagcttt 99285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 31158597 - 31158459
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||||||| | || ||||  ||||| |  |||| | |||||| ||||||| |||||||    ||  ||| || |||| ||||||    
T  31158597 aaagttgttgtcatgtgactgaaaggtcaagggttaaagtcttcaaaacagcctcttgcgtaaaaaacagggta----agattgcatacaataaaccaaa 31158502  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagcttt 142  Q
    ||||||||||||||||||| ||||||||||||| |||||||||    
T  31158501 aatggtgggaccccttcccagaccctgcgtatgcgggagcttt 31158459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 44643595 - 44643660
Alignment:
Q  99 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    |||||||||||||||||||| ||||||||||||| |||||| || |||||||| ||||||||||||    
T  44643595 aaatggtgggaccccttcccagaccctgcgtatgcgggagccttagtgcaccgggctgccctttta 44643660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 162
Target Start/End: Complemental strand, 40762317 - 40762234
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
    |||||| |||| |||||||||||  ||||||||||| |||| |||||||||||||| ||||||||| |||||||| | ||||||||    
T  40762317 aaggctacgtacaatacaccaaa--tggtgggaccctttcctggaccctgcgtatgtgggagctttagtgcaccgggttgcccttt 40762234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 17380391 - 17380238
Alignment:
Q  2 aagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaa 101  Q
    |||||||||||||||||| |||| | ||||||| |||||| | |||||   |||||||||| |||||||||    |||| || ||  ||||||||  |||    
T  17380391 aagttgttgtcatgtgaccgaaaggtcacgggttcaagtcttggaaacaacctcttgtgtataaacagggt----aaggttgtgtgcaatacacc--aaa 17380298  T
Q  102 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
    || ||| ||||||||| |||||||||| ||| ||||||||| |||||||| ||| ||||||    
T  17380297 tgatggaaccccttcctggaccctgcggatgcgggagcttt-gtgcaccgggcttcccttt 17380238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 151
Target Start/End: Original strand, 25641487 - 25641625
Alignment:
Q  7 gttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtg 106  Q
    |||||||||||||||||| | ||||||| |||||||| ||||| |  | |||||| ||||||||||    || | |||||| ||||||||  |||| |||    
T  25641487 gttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcattttgtgtgaaaacagggt----aaagttgcgtacaatacacc--aaattgtg 25641580  T
Q  107 ggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    ||||||||||||| | |||||||||| | ||||||| ||| ||||    
T  25641581 ggaccccttcccgaatcctgcgtatgcgagagctttagtgaaccg 25641625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 29420045 - 29419945
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||  ||||||||| | |||| || |||||||| |||||   |||||||||||||| ||||||| | ||||||||||| |||||||||||    
T  29420045 aaagttgttgtcacatgactgaaaggtcacgagttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaagtaaggctgcgtacaatacaccaaa 29419946  T
Q  100 a 100  Q
    |    
T  29419945 a 29419945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 40579810 - 40579750
Alignment:
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 161  Q
    |||||||||||||||||||||||||| ||||| ||||||||| |||||||| | |||||||    
T  40579810 atggtgggaccccttcccggaccctgagtatgcgggagctttagtgcaccgggttgccctt 40579750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 5450264 - 5450384
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacaccaa 98  Q
    |||||||||||||||||||||||| | ||||||| ||| |||| |||||   ||||||||||||||  || ||||    |||||||||| ||||||||      
T  5450264 aaagttgttgtcatgtgactgaaaggtcacgggttcaattcctggaaacaacctcttgtgtaaaaaaacatggta----aggctgcgtacaatacacc-- 5450357  T
Q  99 aaatggtgggaccccttcccggaccct 125  Q
    ||| ||||||||||||||| |||||||    
T  5450358 aaagggtgggaccccttcctggaccct 5450384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 19614981 - 19615116
Alignment:
Q  11 tcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtggga 109  Q
    |||||||||||||| | ||||||| |||||||| |||||   ||||||| |||||| |||||||    || ||||||| |||| ||||| ||| |||| |    
T  19614981 tcatgtgactgaaaggtcacgggttcaagtccttgaaacatcctcttgtataaaaaacagggta----agactgcgtacaatataccaataatagtgg-a 19615075  T
Q  110 ccccttcccggaccctgcgtatgagggagctttggtgcacc 150  Q
    |||||||||| ||||||||||||  |||||||| |||||||    
T  19615076 ccccttcccgaaccctgcgtatgcaggagctttagtgcacc 19615116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 151
Target Start/End: Complemental strand, 24860138 - 24859999
Alignment:
Q  5 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatgg 104  Q
    ||||||||||||||||| || |  ||||||  ||| ||| |||||   |||| ||||||||||| |||     |||||||||| ||||||||  ||||||    
T  24860138 ttgttgtcatgtgactggaaggttacgggtttaagccctggaaacaacctctggtgtaaaaacatggt-----aggctgcgtacaatacacc--aaatgg 24860046  T
Q  105 tgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    | | |||||||| ||||||||||||||| ||||||||| ||||||||    
T  24860045 tagaaccccttctcggaccctgcgtatgcgggagctttagtgcaccg 24859999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 163
Target Start/End: Complemental strand, 15296490 - 15296405
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||||| |||| ||||||| | |||||| |||||| ||||||||||||||| || ||||||||||| ||  |||||||||||    
T  15296490 aaggctgcgtacaatataccaaaa-tagtgggatcccttctcggaccctgcgtatgtggaagctttggtgcgccaggctgccctttt 15296405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 27573600 - 27573756
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| | ||  ||| |||||||  | ||| | |||||||||| ||||| |||    ||||||||||| ||||||||  ||    
T  27573600 aaagttgttgtcatgtgactgaaaggtcattggttcaagtccgggcaacagcctcttgtgtataaacatggt----aaggctgcgtacaatacacc--aa 27573693  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||| |||  |||||  |||||| ||||| ||||||||| ||||| || | |||||||||    
T  27573694 atggtggaaccatttcccaaaccctgtgtatgtgggagctttagtgcatcgggttgccctttt 27573756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 34080176 - 34080238
Alignment:
Q  102 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    |||||||||||||||||||||||||| |||| ||||| ||| |||||||| | ||||||||||    
T  34080176 tggtgggaccccttcccggaccctgcatatgcgggagttttagtgcaccgggttgccctttta 34080238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 34766330 - 34766376
Alignment:
Q  102 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgca 148  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||    
T  34766330 tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgca 34766376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 39914462 - 39914304
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacaccaa 98  Q
    ||||||||||||||||||||| || | ||||||  ||||| || |||||   ||||||||||||||  ||||||| |||    || ||| |||||||| |    
T  39914462 aaagttgttgtcatgtgactggaaggtcacgggatcaagtactggaaacaacctcttgtgtaaaaaaacagggtaagga----tgtgtacaatacaccga 39914367  T
Q  99 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    |  |||||||||||||||| | |||||||||||| ||||||||| ||||| || | ||||||||||    
T  39914366 a--tggtgggaccccttcctg-accctgcgtatgcgggagctttagtgcatcgggttgccctttta 39914304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 45235974 - 45235820
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaaa 99  Q
    ||||||||| ||||||||||||||   |||| || |||||||||||||| ||||||| |||||||  |   ||||| |||||| |||  |||||||  ||    
T  45235974 aaagttgttctcatgtgactgaaagatcacgagttcaagtcctagaaacagtctcttctgtaaaataa---tagggtaaggctacgtgtaatacac--aa 45235880  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 159  Q
    |||||||||||||||| || |||||| ||||||  |||||||| ||| ||| || |||||    
T  45235879 aatggtgggaccccttaccagaccctacgtatgcaggagctttagtgtaccaagttgccc 45235820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 19977869 - 19977726
Alignment:
Q  2 aagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||| |||| | ||||||| ||||| || ||||| | ||||| ||||||||     ||||  |||| |||||| |||||||||||     
T  19977869 aagttgttgtcatgtgaccgaaaggtcacgggttcaagttctggaaacagcctcttttgtaaaaaa----taggataaggttgcgtacaatacaccaaa- 19977775  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 150  Q
     |||||||| ||||||||| ||| || ||||| ||||||||| |||||||    
T  19977774 -tggtgggatcccttcccgaaccttgtgtatgcgggagctttagtgcacc 19977726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 24890463 - 24890533
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcac 149  Q
    |||||||| || ||||||||||   |||||||||||||||||||||||||||||||  |||||||| ||||||    
T  24890463 aaggctgcatacaatacaccaat--tggtgggaccccttcccggaccctgcgtatgcaggagctttagtgcac 24890533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 33795264 - 33795401
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgta-aaatacaccaa 98  Q
    ||||||||||||| |||| ||||| | ||||||| |||||||  |||||   |||||| ||||||| |||||||    |||||||||| ||||||||| |    
T  33795264 aaagttgttgtcacgtgattgaaaggtcacgggttcaagtcccggaaacaacctcttgggtaaaaaacagggta----aggctgcgtacaaatacaccta 33795359  T
Q  99 aaatggtgggaccccttcccggaccctgcgtatgagggagctttg 143  Q
       ||||||||||||||||| ||||||| ||||| ||||||||||    
T  33795360 ---tggtgggaccccttcccagaccctgtgtatgcgggagctttg 33795401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 138
Target Start/End: Complemental strand, 44449467 - 44449407
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggag 138  Q
    ||||||||||| |||||||||||| | |||||||||||||||||||||||||| || |||||    
T  44449467 aaggctgcgtacaatacaccaaaa-tagtgggaccccttcccggaccctgcgtttgtgggag 44449407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 82 - 142
Target Start/End: Complemental strand, 19185823 - 19185763
Alignment:
Q  82 tgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagcttt 142  Q
    |||||| ||| ||| ||||||||||| ||||||||| |||||||||||||| |||||||||    
T  19185823 tgcgtacaatgcacaaaaaatggtggaaccccttcctggaccctgcgtatgcgggagcttt 19185763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 44604833 - 44604905
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggta 73  Q
    ||||||||||||||||||||| || | ||| ||| |||||||| |||||   |||||||||||||||||||||    
T  44604833 aaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaacagggta 44604905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 150
Target Start/End: Original strand, 8575975 - 8576018
Alignment:
Q  107 ggaccccttcccggaccctgcgtatgagggagctttggtgcacc 150  Q
    |||||||||||||||||||||||||| ||||||||| |||||||    
T  8575975 ggaccccttcccggaccctgcgtatgtgggagctttagtgcacc 8576018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 143
Target Start/End: Complemental strand, 32781367 - 32781307
Alignment:
Q  81 ctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttg 143  Q
    ||||||| |||||||||||  ||||||||||||||||| ||||||| ||||| ||||||||||    
T  32781367 ctgcgtacaatacaccaaa--tggtgggaccccttcccagaccctgtgtatgcgggagctttg 32781307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 160
Target Start/End: Original strand, 41409936 - 41409995
Alignment:
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccct 160  Q
    ||||||||||||||||||||||||||| |||| ||||||||  |||||||| | ||||||    
T  41409936 atggtgggaccccttcccggaccctgcatatgcgggagcttcagtgcaccgggttgccct 41409995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 3633762 - 3633708
Alignment:
Q  108 gaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
    ||||||||||||||||| || |||| ||||||||| |||||||||| ||||||||    
T  3633762 gaccccttcccggaccccgcatatgcgggagctttagtgcaccgagttgcccttt 3633708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 22371199 - 22371249
Alignment:
Q  114 ttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    ||||||||||||||||||| ||||||||| |||||||| | ||||||||||    
T  22371199 ttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttta 22371249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 162
Target Start/End: Original strand, 25632561 - 25632644
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
    ||||||||||| |||||||||||  ||||||||  |||||||| ||| | |||||| ||||||||| |||||||| | ||||||||    
T  25632561 aaggctgcgtacaatacaccaaa--tggtgggattccttcccgaaccttacgtatgcgggagctttagtgcaccgggttgcccttt 25632644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 142
Target Start/End: Complemental strand, 24059057 - 24059016
Alignment:
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagcttt 142  Q
    ||||||||||||||| |||||||||||||||| |||||||||    
T  24059057 atggtgggacccctttccggaccctgcgtatgtgggagcttt 24059016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 151
Target Start/End: Complemental strand, 26684683 - 26684631
Alignment:
Q  99 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    ||||||||||||| ||||||| |||||||||||| |||||||||  |||||||    
T  26684683 aaatggtgggacctcttcccgaaccctgcgtatgcgggagctttaatgcaccg 26684631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 17705474 - 17705537
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaa 64  Q
    ||||||||||||||||||||  || | ||||||| |||||||| ||||| | ||||||||||||    
T  17705474 aaagttgttgtcatgtgactagaaggtcacgggttcaagtcctggaaaccgcctcttgtgtaaa 17705537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 151
Target Start/End: Complemental strand, 124962 - 124925
Alignment:
Q  114 ttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    ||||||||||||||||||| ||||||||| ||||||||    
T  124962 ttcccggaccctgcgtatgcgggagctttagtgcaccg 124925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 760066 - 760114
Alignment:
Q  115 tcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||| |||||||||||| |||||||||||||||||  |||| ||||||    
T  760066 tcccgaaccctgcgtatgtgggagctttggtgcaccaggctgtcctttt 760114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 163
Target Start/End: Complemental strand, 23053012 - 23052964
Alignment:
Q  115 tcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||| |||||||||||||  |||||||| |||||||| |||||||||||    
T  23053012 tcccagaccctgcgtatgcaggagcttttgtgcaccgggctgccctttt 23052964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 23145854 - 23145736
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||   |||||||||| | ||||||| |||||| |  |||| | |||||||||||||| ||| |||    |||||||||| ||||||||||     
T  23145854 aaagttgttgtagcgtgactgaaaggtcacgggttcaagtcttgaaaacagactcttgtgtaaaaaacagtgta----aggctgcgtacaatacaccaat 23145759  T
Q  100 aatggtgggaccccttcccggaccc 124  Q
      ||||||||||| |||||||||||    
T  23145758 --tggtgggaccctttcccggaccc 23145736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 23557644 - 23557526
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||   |||||||||| | ||||||| |||||| |  |||| | |||||||||||||| ||| |||    |||||||||| ||||||||||     
T  23557644 aaagttgttgtagcgtgactgaaaggtcacgggttcaagtcttgaaaacagactcttgtgtaaaaaacagtgta----aggctgcgtacaatacaccaat 23557549  T
Q  100 aatggtgggaccccttcccggaccc 124  Q
      ||||||||||| |||||||||||    
T  23557548 --tggtgggaccctttcccggaccc 23557526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 8e-45; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 13628948 - 13628788
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaa-aaacagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||| ||||||||||    |||||||||| ||||||||||     
T  13628948 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggta----aggctgcgtacaatacaccaat 13628853  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||||    
T  13628852 aatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttta 13628788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 29366878 - 29366717
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||| ||| | ||||||| |||||||| ||||| | ||||||| |||||| |||||||    |||||||||| ||||||||||     
T  29366878 aaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggta----aggctgcgtacaatacaccaat 29366783  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttttag 165  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||| | | |||||||||||    
T  29366782 aatggtgggaccccttcccggaccctgcgtatgtgggagctttagtgcactgggttgcccttttag 29366717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 26869708 - 26869864
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| | ||| ||| |||||||| ||||| | |||| ||||||||||||||||    |||||||||| |||||||||||     
T  26869708 aaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctctggtgtaaaaacagggta----aggctgcgtacaatacaccaaa- 26869802  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
     |||||||||||||| ||||||| |||||||| |||||||||||||||||| | |||||||||    
T  26869803 -tggtgggaccccttgccggaccatgcgtatgcgggagctttggtgcaccgggttgccctttt 26869864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 46421193 - 46421055
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||| ||| | ||||||| |||||||| ||||| | |||||||||||||| |||||||    |||||||||| ||||||||||     
T  46421193 aaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaat 46421098  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagcttt 142  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  46421097 aatggtgggaccccttcccggaccctgcgtatgcgggagcttt 46421055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 13730760 - 13730601
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||||||||||| || | ||||||| |||||||| ||||| | |||||||||||||| |||||||    |||||| ||| ||||||||||     
T  13730760 aaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgtgtacaatacaccaat 13730665  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||||||||||||||||||| || |||| ||||||||| |||||||| | |||||||||    
T  13730664 aatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgccctttt 13730601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 8247845 - 8247707
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||||||| | ||||||| |||||||| ||||| | |||||||||||||| |||||||    ||| |||||| ||||||||||     
T  8247845 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggttgcgtacaatacaccaat 8247750  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagcttt 142  Q
    ||||||||||| ||||||||||||||||||||| |||||||||    
T  8247749 aatggtgggactccttcccggaccctgcgtatgcgggagcttt 8247707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 40272968 - 40272811
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||||||||||| || | || |||| |||||||| |||||   |||||||||||||| |||||||    |||||||||| |||||||||||    
T  40272968 aaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaaa 40272873  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
      ||||||||||||||||||||||||||||||| ||||||||| |||||||| | |||||||||    
T  40272872 --tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 40272811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 34420800 - 34420642
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||| |||||||||| | ||||||| |||||||| ||||| | |||||||||||||| |||||||    ||||||||||  ||||||||||    
T  34420800 aaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtaccatacaccaaa 34420705  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    | |||||||||||||||||||||| |||||||| ||||||||| ||||||   |||||||||||    
T  34420704 a-tggtgggaccccttcccggaccttgcgtatgtgggagctttagtgcacatggctgccctttt 34420642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 5173876 - 5173718
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| | ||||||| |||||||| |||||   ||||||||||||||||  |||    ||| ||| |  ||||||||||||    
T  5173876 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaacaaagta----aggttgcatgcaatacaccaaaa 5173781  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||||||| |||||||||||||| |||||||| ||||||||| |||||||| | |||||||||    
T  5173780 atggtggggccccttcccggaccttgcgtatgcgggagctttagtgcaccgggttgccctttt 5173718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 22609767 - 22609921
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    ||||||||||||||||||||| || |  |||||| |||||| | ||||| | |||||||||||||||||||||    |||||||||| |||||||||||     
T  22609767 aaagttgttgtcatgtgactgtaaggtaacgggttcaagtcttggaaacagcctcttgtgtaaaaacagggta----aggctgcgtacaatacaccaaa- 22609861  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 161  Q
     |||||||||||||||||||||| |||||||| ||||||||  |||||||| | |||||||    
T  22609862 -tggtgggaccccttcccggaccttgcgtatgcgggagcttcagtgcaccgggttgccctt 22609921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 16735442 - 16735599
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    ||||||||||||||||||||| |||| ||||||| |||||||| ||||| | |||||||  |||||||||||    ||||||||||| ||||||||  ||    
T  16735442 aaagttgttgtcatgtgactgtaacgtcacgggttcaagtcctcgaaacagcctcttgtagaaaaacagggt----aaggctgcgtacaatacacc--aa 16735535  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    |||||||||||||||||||||| ||||||||| || |||||  |||||| | | ||||||||||    
T  16735536 atggtgggaccccttcccggacactgcgtatgcggtagcttcagtgcactgggttgccctttta 16735599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 39203517 - 39203671
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| | ||| ||| |||||||| ||||| | ||||||||||||| |||||||    ||| |||||| |||||||||||     
T  39203517 aaagttgttgtcatgtgactgaaaggtcacaggttcaagtccttgaaacagcctcttgtgtaaaa-cagggta----aggttgcgtacaatacaccaaa- 39203610  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
     |||||||||||||||||||||| ||| |||| ||||||||| |||||||| | ||||||||    
T  39203611 -tggtgggaccccttcccggaccttgcatatgcgggagctttagtgcaccgggttgcccttt 39203671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 163
Target Start/End: Original strand, 516417 - 516570
Alignment:
Q  8 ttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa-tggt 105  Q
    ||||||||||||||||| | ||||||| |||||||| ||||| | |||||||||||||| |||||||    |||||||| | |||| |||||||| |||     
T  516417 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgcacaataaaccaaaaaatggc 516512  T
Q  106 gggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||||||| ||||||||||||| ||||||||| |||||||| | |||||||||    
T  516513 gggaccccttccccgaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 516570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 22123067 - 22122918
Alignment:
Q  5 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatgg 104  Q
    |||||||||||||||||||| | | ||||| |||||||| ||||| ||||||||||| ||||||||||    ||||||||||| ||||||||  ||||||    
T  22123067 ttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacagtctcttgtgt-aaaacagggt----aaggctgcgtacaatacacc--aaatgg 22122975  T
Q  105 tgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 161  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||| | |||||||    
T  22122974 tgggaccccttcccggaccctgcatatgcgagagctctagtgcaccgggttgccctt 22122918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 1217091 - 1217246
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||| ||||||| ||||||| | ||||||| |||||||| ||||| | ||||||||||||| |||||||    |||||||||| |||||||||||     
T  1217091 aaagttgtagtcatgtcactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa- 1217184  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
     ||| |||||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  1217185 -tggcgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 1217246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 150
Target Start/End: Complemental strand, 10795554 - 10795435
Alignment:
Q  28 cacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctg 126  Q
    ||||||| |||||||| ||||| | ||||||||||||| ||||||||    |||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  10795554 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggta----aggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctg 10795459  T
Q  127 cgtatgagggagctttggtgcacc 150  Q
    |||||| ||||||||  |||||||    
T  10795458 cgtatgcgggagcttcagtgcacc 10795435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 26573128 - 26573282
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||| |||||||||| | ||||||| |||||||| ||||| | ||| |||||||||| |||||||    |||||||||| ||||||||||     
T  26573128 aaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaacagggta----aggctgcgtacaatacaccaat 26573223  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccct 160  Q
      |||||||||||| |||||||||||||||||| | ||||||| |||||||  ||||||||    
T  26573224 --tggtgggaccccatcccggaccctgcgtatgcgtgagctttagtgcaccaggctgccct 26573282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 163
Target Start/End: Complemental strand, 53996718 - 53996564
Alignment:
Q  5 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatg 103  Q
    |||||||||| ||||||||| | |||| || |||||| | |||||   |||||||||||||| |||||||    ||||||| || |||||||||||| ||    
T  53996718 ttgttgtcatttgactgaaaggtcacgtgttcaagtcgtggaaacaacctcttgtgtaaaaaacagggta----aggctgcttacaatacaccaaaa-tg 53996624  T
Q  104 gtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||||||||| ||| ||||||||| ||||||||| |||||||| |||||||||||    
T  53996623 gtgggaccccttccctgacactgcgtatgtgggagctttagtgcaccgggctgccctttt 53996564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 77 - 162
Target Start/End: Complemental strand, 45786299 - 45786214
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||  |||||||| |||||||| | ||||||||    
T  45786299 aaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgaatgctggagctttagtgcaccgggttgcccttt 45786214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 25944470 - 25944628
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    ||||||||||||| |||||||||| | || |||| |||||||| ||||| | |||| |||||||||   ||   | ||||||| ||| ||||||||||||    
T  25944470 aaagttgttgtcacgtgactgaaaggtcatgggttcaagtcctggaaaccgcctctcgtgtaaaaaactgg---gcaaggctgagtacaatacaccaaaa 25944566  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
     ||||||||||||||||| ||||||||||||| ||||||||| | |||||  |||||||||||    
T  25944567 -tggtgggaccccttccctgaccctgcgtatgtgggagctttagcgcaccaggctgccctttt 25944628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 6411977 - 6411832
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||| ||||| | | || |||| |||||| |  |||| | |||||||||||||||||||||    |||||||||| |||||||||||     
T  6411977 aaagttgttgtcatgtaactgataggtcatgggttcaagtcttgtaaacagcctcttgtgtaaaaacagggta----aggctgcgtacaatacaccaaa- 6411883  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccga 152  Q
     || |||||||||||||| |||| |||||||| ||||||||| |||||||||    
T  6411882 -tgatgggaccccttcccagaccttgcgtatgcgggagctttagtgcaccga 6411832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 77 - 163
Target Start/End: Original strand, 54484765 - 54484849
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| ||||||||| |||||||| | |||||||||    
T  54484765 aaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 54484849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 9607204 - 9607342
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||||||| | ||  ||| |||||||| ||||| | |||||| ||||||| |||||||    |||||||||| ||||||||||     
T  9607204 aaagttgttgtcatgtgactgaaaggtcatcggttcaagtcctggaaacagcctcttgcgtaaaaaacagggta----aggctgcgtagaatacaccaat 9607299  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagcttt 142  Q
    |||| |||||||||||||| ||||| || |||| |||||||||    
T  9607300 aatgttgggaccccttcccagaccccgcatatgcgggagcttt 9607342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 77 - 160
Target Start/End: Complemental strand, 353434 - 353351
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccct 160  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||| || |||| ||||||||| |||||||| | ||||||    
T  353434 aaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgccct 353351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 36 - 151
Target Start/End: Original strand, 14986993 - 14987105
Alignment:
Q  36 caagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgag 134  Q
    |||||||| ||||| | |||||||||||||| |||||||    |||||||||| |||||||||| ||||||||||||| |||||||||| ||| |||| |    
T  14986993 caagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaataatggtgggacccattcccggaccttgcatatgcg 14987088  T
Q  135 ggagctttggtgcaccg 151  Q
    |||||||| ||||||||    
T  14987089 ggagctttagtgcaccg 14987105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 77 - 163
Target Start/End: Complemental strand, 34771447 - 34771363
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||| |||| ||||||| | |||||||| |||||||||||    
T  34771447 aaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggctgccctttt 34771363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 30928302 - 30928166
Alignment:
Q  2 aagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    ||||| ||||||||||||||||| | ||||||| |||||||| ||||| | |||||||||||||| || ||||    ||| || ||||||||||||||      
T  30928302 aagttcttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaaggta----aggttgtgtaaaatacaccaat- 30928208  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttg 143  Q
     ||| |||||||||||||||||||||| |||| ||||||||||    
T  30928207 -tggcgggaccccttcccggaccctgcatatgtgggagctttg 30928166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 45139624 - 45139479
Alignment:
Q  11 tcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaaaaatggtggga 109  Q
    |||||||||||||| | ||||||| |||||  | |||||   ||||||||||||| ||||||||    ||||||| || |||||||||||||||||||||    
T  45139624 tcatgtgactgaaaggtcacgggttcaagttttggaaacaacctcttgtgtaaaacacagggta----aggctgcatacaatacaccaaaaatggtggga 45139529  T
Q  110 ccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 161  Q
    ||||||||| || |||||||||| |||| |||| |||||||| |||||||||    
T  45139528 ccccttcccaga-cctgcgtatgcgggaacttt-gtgcaccgggctgccctt 45139479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 77 - 163
Target Start/End: Complemental strand, 49013558 - 49013472
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||| || || | ||||||||| |||||||| | |||||||||    
T  49013558 aaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatacgcgggagctttagtgcaccgggttgccctttt 49013472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 52926366 - 52926218
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    ||||||||||||||||||||| || | ||||||| |||||||| ||||| | ||||||||||            | ||||||||||| |||||||||||     
T  52926366 aaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgta------------gtaaggctgcgtacaatacaccaaa- 52926280  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
     ||||||||| ||||||||||||||||||||| ||||||||| | |||||| | |||||||||    
T  52926279 -tggtgggacaccttcccggaccctgcgtatgcgggagctttagcgcaccgggttgccctttt 52926218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 10870107 - 10870021
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaat 91  Q
    |||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||||||||||||    |||||||||||||||    
T  10870107 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggt----aaggctgcgtaaaat 10870021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 29 - 162
Target Start/End: Original strand, 31592878 - 31593004
Alignment:
Q  29 acgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcg 128  Q
    |||||| |||||||| ||||| | ||||||||||||| |||||||    |||||||||| |||||||||||  ||||||||| ||||||||||||||||     
T  31592878 acgggttcaagtcctggaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa--tggtgggactccttcccggaccctgca 31592970  T
Q  129 tatgagggagctttggtgcaccgagctgcccttt 162  Q
    |||| ||||||| | |||||||| | ||||||||    
T  31592971 tatgcgggagctctagtgcaccgggttgcccttt 31593004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 77 - 163
Target Start/End: Original strand, 15797294 - 15797378
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  15797294 aaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgtgggagctctagtgcaccgggttgccctttt 15797378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 79 - 165
Target Start/End: Complemental strand, 25517251 - 25517167
Alignment:
Q  79 ggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttttag 165  Q
    ||||||||| |||||||  |||||||||||||||||||||||| ||||||||||  |||||||| |||||||| | |||||||||||    
T  25517251 ggctgcgtacaatacac--aaaatggtgggaccccttcccggatcctgcgtatgctggagctttagtgcaccgggttgcccttttag 25517167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 7697041 - 7696903
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||| ||| | ||||||| |||||||| ||||| ||||||||||| ||||||||||    ||||||||||| ||||||||  ||    
T  7697041 aaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagtctcttgtgt-aaaacagggt----aaggctgcgtacaatacacc--aa 7696949  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    ||||     ||||||||||||| |||| |||| ||||||| | ||||||||    
T  7696948 atgg-----ccccttcccggacactgcatatgtgggagctctagtgcaccg 7696903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 142
Target Start/End: Original strand, 33926094 - 33926220
Alignment:
Q  11 tcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggac 110  Q
    |||||||||||||| | || |||| |||||||| ||||  | ||||||||||||||||||||    ||||||| ||| |||||||| | |||||||||||    
T  33926094 tcatgtgactgaaaggtcatgggttcaagtcctggaaatagcctcttgtgtaaaaacagggt----aaggctgtgtacaatacacc-ataatggtgggac 33926188  T
Q  111 cccttcccggaccctgcgtatgagggagcttt 142  Q
    ||||||| ||||||||| |||| | |||||||    
T  33926189 cccttcctggaccctgcatatgcgagagcttt 33926220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 12914191 - 12914032
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||| ||||||| |||| | |||  || |||||||| ||||| | |||||||||||||| |||||||    |||| ||||| |||||||||||    
T  12914191 aaagttgttgtaatgtgaccgaaaggtcacaagttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggcggcgtacaatacaccaaa 12914096  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttttag 165  Q
      ||||| ||||||||||| |||||||| |||| ||||||||   ||||||| | |||||||||||    
T  12914095 --tggtgagaccccttcccagaccctgcatatgcgggagcttcaatgcaccgggttgcccttttag 12914032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 131
Target Start/End: Original strand, 47624095 - 47624167
Alignment:
Q  53 ctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtat 131  Q
    |||||||||||||||||||||    |||||||||| |||||||||||  ||||||||||||||||||||||||| ||||    
T  47624095 ctcttgtgtaaaaacagggta----aggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgtgtat 47624167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 163
Target Start/End: Complemental strand, 54374429 - 54374344
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||||| ||| |||||||| |||||||||||||||||||||||||| |||| ||||||||| || ||||  |||||| ||||    
T  54374429 aaggctgcgtacaatccaccaaaa-tggtgggaccccttcccggaccctgcatatgcgggagctttagttcaccaggctgccatttt 54374344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 82 - 151
Target Start/End: Complemental strand, 829521 - 829453
Alignment:
Q  82 tgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    |||||| |||||||||||| |||||||||||||||||| ||||||||||||  |||||||| ||||||||    
T  829521 tgcgtacaatacaccaaaa-tggtgggaccccttcccgaaccctgcgtatgcaggagctttagtgcaccg 829453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 24851364 - 24851300
Alignment:
Q  99 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||||||||||||||||| ||||| |||| ||||||||| |||||||| | |||||||||    
T  24851364 aaatggtgggaccccttcccggatcctgcatatgcgggagctttagtgcaccgggttgccctttt 24851300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 45948921 - 45948849
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    |||||||| || ||||||||||   ||||||||||||||| ||||||||||||||| ||||||||| ||||||||    
T  45948921 aaggctgcatacaatacaccaat--tggtgggaccccttctcggaccctgcgtatgcgggagctttagtgcaccg 45948849  T

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Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 30452892 - 30452954
Alignment:
Q  102 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    |||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||||    
T  30452892 tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttta 30452954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 164
Target Start/End: Complemental strand, 10484671 - 10484614
Alignment:
Q  107 ggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    ||||||||||| |||||||||||||| ||||||||| |||||||| | ||||||||||    
T  10484671 ggaccccttcctggaccctgcgtatgcgggagctttagtgcaccgggttgccctttta 10484614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 163
Target Start/End: Complemental strand, 44403619 - 44403554
Alignment:
Q  98 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||||||||||||||||||||||||||| ||||||  | |||||| |||||||| |||||| ||||    
T  44403619 aaaatggtgggaccccttcccggaccctacgtatgctgaagctttagtgcaccgggctgccttttt 44403554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 158
Target Start/End: Original strand, 55401254 - 55401330
Alignment:
Q  81 ctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcc 158  Q
    ||||||| |||||||||||| ||||||||||||||| |||||| | |||||| |||||||||  ||||||| ||||||    
T  55401254 ctgcgtataatacaccaaaa-tggtgggaccccttctcggaccttccgtatgcgggagcttttttgcaccgggctgcc 55401330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 7942993 - 7943134
Alignment:
Q  3 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 101  Q
    ||||||||||||||||||| || | ||||| | |||||||| ||||| |  |||||| |||||| |||||||    || ||||||| |||||| ||||      
T  7942993 agttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcatcttgtctaaaaaacagggta----agactgcgtacaatacatcaaa-- 7943086  T
Q  102 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcac 149  Q
    |||||||| ||||| || |||| |||||||| ||||||||| ||||||    
T  7943087 tggtgggatccctttccagaccatgcgtatgcgggagctttagtgcac 7943134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 12525414 - 12525543
Alignment:
Q  7 gttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggt 105  Q
    |||||||| ||||||||| | ||| ||| | |||||| ||||| | |||||||||||||| |||||||    ||||||||  || |||||||||||||||    
T  12525414 gttgtcatatgactgaaaggtcacaggttcgagtcctggaaacagcctcttgtgtaaaaatcagggta----aggctgcg--aagtacaccaaaaatggt 12525507  T
Q  106 gggaccccttcccggaccctgcgtatgagggagctt 141  Q
    ||||| ||||||  ||||||| ||||  ||||||||    
T  12525508 gggacaccttcctagaccctgtgtatacgggagctt 12525543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 45620985 - 45620890
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta--aaaacagggtagggaaggctgcgtaaaatacaccaa 98  Q
    ||||||||||||| |||||||||| | ||||||| ||||| || ||||| | ||||||||||  ||||||||||    ||||||||||| ||||||||||    
T  45620985 aaagttgttgtcacgtgactgaaaggtcacgggttcaagttctggaaacagcctcttgtgtaaaaaaacagggt----aaggctgcgtacaatacaccaa 45620890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 164
Target Start/End: Original strand, 40968611 - 40968677
Alignment:
Q  98 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    ||||||||| ||||||||||  |||||| | |||| ||||||||| ||||| |||||||||||||||    
T  40968611 aaaatggtgagaccccttcctagaccctacatatgcgggagctttagtgcatcgagctgccctttta 40968677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 163
Target Start/End: Original strand, 47624208 - 47624257
Alignment:
Q  114 ttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||||||||||||| ||||||||| |||||||| | |||||||||    
T  47624208 ttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 47624257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 50625013 - 50624952
Alignment:
Q  102 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||| |||||| || ||||||||| | ||||||||| |||||||| |||||||||||    
T  50625013 tggtgggacgccttcctgggccctgcgtaagtgggagctttagtgcaccgggctgccctttt 50624952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 53062039 - 53062112
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggta 73  Q
    |||||||||||||||||||||||| | |||| || |||||||| ||||| | ||| ||||| ||||||||||||    
T  53062039 aaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcctggaaacagcctcctgtgtcaaaaacagggta 53062112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 4495820 - 4495714
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||||||||||| || | ||||||| ||||||||  |||  | || |||||| |||||||||||    ||||||||||| ||||||||  |    
T  4495820 aaagttgttgtcatgtgactggaaggtcacgggttcaagtcctgaaaatagcctattgtgtaaaaaacagggt----aaggctgcgtacaatacacc--a 4495727  T
Q  100 aatggtgggaccc 112  Q
    |||||||||||||    
T  4495726 aatggtgggaccc 4495714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 45416986 - 45416932
Alignment:
Q  109 accccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    ||||||||||||||||||||||||  | |||||| |||||||| ||||||||||||    
T  45416986 accccttcccggaccctgcgtatgcagaagcttt-gtgcaccgggctgccctttta 45416932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 9276338 - 9276400
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagcttt 142  Q
    ||||||||||| |||||||||||  |||||| |||| ||||||||||||||||||| |||| ||||    
T  9276338 aaggctgcgtacaatacaccaaa--tggtgg-accctttcccggaccctgcgtatgcgggaacttt 9276400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 46170030 - 46169988
Alignment:
Q  99 aaatggtgggaccccttcccggaccctgcgtatgagggagctt 141  Q
    ||||||| ||||||||||||||||||||| |||| ||||||||    
T  46170030 aaatggtaggaccccttcccggaccctgcatatgtgggagctt 46169988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 165
Target Start/End: Complemental strand, 54032614 - 54032568
Alignment:
Q  119 ggaccctgcgtatgagggagctttggtgcaccgagctgcccttttag 165  Q
    |||||||||||||| ||||||||| |||||||| | |||||||||||    
T  54032614 ggaccctgcgtatgcgggagctttagtgcaccgggttgcccttttag 54032568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 4495719 - 4495675
Alignment:
Q  119 ggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||||||||||||| ||||||||| |||||||| | |||||||||    
T  4495719 ggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 4495675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 159
Target Start/End: Original strand, 35417998 - 35418058
Alignment:
Q  99 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 159  Q
    |||||||||||||||||||||||||| ||  ||| | ||||||| ||||| || |||||||    
T  35417998 aaatggtgggaccccttcccggaccccgcaaatgcgagagctttagtgcatcgggctgccc 35418058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 43956515 - 43956471
Alignment:
Q  119 ggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||||| ||||||| ||||||||| |||||||| |||||||||||    
T  43956515 ggacccagcgtatgcgggagctttagtgcaccgggctgccctttt 43956471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 2e-42; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 38879560 - 38879720
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||| |||||| |||||||    |||||||||| ||||||||||     
T  38879560 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggta----aggctgcgtacaatacaccaat 38879655  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||||    
T  38879656 aatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttta 38879720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 43334181 - 43334340
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacaccaa 98  Q
    |||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||| ||||||||||  |||||||    |||||||||| ||||||||||    
T  43334181 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaaacagggta----aggctgcgtacaatacaccaa 43334276  T
Q  99 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||||||||||||||||||||||||||||| ||| ||||||||| |||||||| | |||||||||    
T  43334277 aaatggtgggaccccttcccggaccctgcg-atgcgggagctttagtgcaccgggttgccctttt 43334340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 27328731 - 27328869
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||||||| | ||| ||| |||||||| ||||| |||||||||||||||| |||||||    |||||||||| ||||||||||     
T  27328731 aaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagtctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaat 27328826  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagcttt 142  Q
    |||||||||||||||||||| |||||||||||| |||||||||    
T  27328827 aatggtgggaccccttcccgaaccctgcgtatgcgggagcttt 27328869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 41014298 - 41014455
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    ||||||||||||||||||||| || | ||||||| |||||||| ||||| | ||||||||||||||||||||    ||||||||||| ||||||||  ||    
T  41014298 aaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggt----aaggctgcgtacaatacacc--aa 41014391  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    ||||||||||||||||| |||||| || |||| ||||||||| |||||||| | ||||||||||    
T  41014392 atggtgggaccccttcctggaccccgcatatgcgggagctttagtgcaccgggttgccctttta 41014455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 4619262 - 4619102
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||||||||||| || | ||||||| |||||||| ||||  | |||||||||||||| |||||||    |||||||||| ||||||||||     
T  4619262 aaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaat 4619167  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    ||||||||||||||||||||||||| || |||| | ||||||| |||||||| | ||||||||||    
T  4619166 aatggtgggaccccttcccggaccccgcatatgcgagagctttagtgcaccgggttgccctttta 4619102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 165
Target Start/End: Original strand, 32703411 - 32703560
Alignment:
Q  9 tgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtggg 108  Q
    |||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||||| |||||||    |||||||||| |||||||||||  |||||||    
T  32703411 tgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa--tggtggg 32703503  T
Q  109 accccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttttag 165  Q
    ||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||||    
T  32703504 accccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttttag 32703560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 24448869 - 24449026
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||||||||||| || | ||||||| |||||||| ||||| | || |||||||||||     ||||| ||||||||||| |||||||||||    
T  24448869 aaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaa----tagggtaaggctgcgtacaatacaccaaa 24448964  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
      |||||||||||||||||||||||||||||||  |||||||| |||||||| | |||||||||    
T  24448965 --tggtgggaccccttcccggaccctgcgtatgcaggagctttagtgcaccgggttgccctttt 24449026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 8170138 - 8169983
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    ||||||||||||||||||| |||| | ||||||| |||||||| ||||| | || |||||||||| |||||||    |||||||||| |||||||||||     
T  8170138 aaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa- 8170045  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
     |||||||||||||||||||||||||| |||| ||||| ||  |||||||| | |||||||||    
T  8170044 -tggtgggaccccttcccggaccctgcatatgcgggagtttcagtgcaccgggttgccctttt 8169983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 163
Target Start/End: Complemental strand, 19143094 - 19142942
Alignment:
Q  5 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatgg 104  Q
    ||||||||| |||||| ||| | ||| ||| |||||||| |||||   |||||||||||||||||||||    |||||||||| | |||||||||  |||    
T  19143094 ttgttgtcacgtgactaaaatgccacaggttcaagtcctggaaacaacctcttgtgtaaaaacagggta----aggctgcgtacagtacaccaaa--tgg 19143001  T
Q  105 tgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||||||||||||| |||||||| ||||| ||| |||||| |  ||||||||||    
T  19143000 tgggaccccttcccggaccatgcgtatgcgggagatttagtgcactggcctgccctttt 19142942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 35710292 - 35710447
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||| ||||||| | ||||||| |||||||| ||||| | |||||||||||||  ||||||    |||||||||  |||||||||||     
T  35710292 aaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaat-agggta----aggctgcgttcaatacaccaaa- 35710385  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
     |||||||||||||||||||| | ||| |||| ||||||| | |||||||| | |||||||||    
T  35710386 -tggtgggaccccttcccggaacatgcatatgcgggagctctagtgcaccgggttgccctttt 35710447  T

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Target: chr5; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 82 - 162
Target Start/End: Complemental strand, 12575739 - 12575660
Alignment:
Q  82 tgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||||||||  ||||||||||||||||| ||||||||||    
T  12575739 tgcgtacaatacaccaaaa-tggtgggaccccttcctggaccctgcgtatgcaggagctttggtgcaccgggctgcccttt 12575660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 162
Target Start/End: Complemental strand, 13801895 - 13801767
Alignment:
Q  31 gggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgt 129  Q
    |||| |||||||| ||| | | |||||||||||||| |||||||    |||||||||| |||||||||| ||||||||||||||||||||||||| || |    
T  13801895 gggttcaagtcctggaagcagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcat 13801800  T
Q  130 atgagggagctttggtgcaccgagctgcccttt 162  Q
    ||| | ||||||| |||||||| | ||||||||    
T  13801799 atgcgagagctttagtgcaccgggttgcccttt 13801767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 53 - 162
Target Start/End: Complemental strand, 7097863 - 7097760
Alignment:
Q  53 ctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccga 152  Q
    |||||||||||||||||||||    ||| |||||| |||||||||||  ||||| |||||||||||| |||||||||||| ||||||||| |||||||      
T  7097863 ctcttgtgtaaaaacagggta----aggttgcgtacaatacaccaaa--tggtgagaccccttcccgaaccctgcgtatgcgggagctttagtgcaccat 7097770  T
Q  153 gctgcccttt 162  Q
    ||||||||||    
T  7097769 gctgcccttt 7097760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 16957386 - 16957451
Alignment:
Q  99 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||||    
T  16957386 aaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttta 16957451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 2838757 - 2838899
Alignment:
Q  1 aaagttgttgtcatgtgactg-aaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||||||||||| ||| | |||| |  ||||||  |||||| |  ||||||||||||||||||||    |||||||||| |||||||||||    
T  2838757 aaagttgttgtcatgtgactgtaaaggtcacgaggtcaagtctcagaaacagcatcttgtgtaaaaacagggta----aggctgcgtacaatacaccaaa 2838852  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgca 148  Q
      |||||||| |||||| ||||||||||||||| |||||| | ||||||    
T  2838853 --tggtgggatcccttctcggaccctgcgtatgcgggagcatcggtgca 2838899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 151
Target Start/End: Original strand, 25622524 - 25622584
Alignment:
Q  91 tacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  25622524 tacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccg 25622584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 36 - 151
Target Start/End: Original strand, 43574620 - 43574730
Alignment:
Q  36 caagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgag 134  Q
    |||||||| |||||  ||||||||||| |||||||||||    |||||||||| |||| ||||||  ||||||||||||||||||||||||||||||| |    
T  43574620 caagtcctggaaacaatctcttgtgtagaaaacagggta----aggctgcgtacaatataccaaa--tggtgggaccccttcccggaccctgcgtatgcg 43574713  T
Q  135 ggagctttggtgcaccg 151  Q
    |||||||| | ||||||    
T  43574714 ggagctttagagcaccg 43574730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 29334447 - 29334533
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    ||||||||||| ||||||||| || ||||||||||| ||||||||||||||||||| |||| ||||  ||||||| ||||||||||||    
T  29334447 aaggctgcgtacaatacaccagaa-tggtgggacccattcccggaccctgcgtatgtgggatctttaatgcaccgggctgccctttta 29334533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 209083 - 208925
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||| ||| | |||  || |||||||| | |||   |||||||||||||||||||||    ||||||| |  ||||||||||||    
T  209083 aaagttgttgtcatgtgactaaaaggtcacaagttcaagtcctggcaacaacctcttgtgtaaaaacagggta----aggctgcattcaatacaccaaaa 208988  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
     |||||||||||||||| |||||||| |||||   ||||||| |||||||| || || ||||||    
T  208987 -tggtgggaccccttcctggaccctgggtatgcaagagctttagtgcaccgggcggcactttta 208925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 39301102 - 39301247
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||| ||||||| | ||||||| |||||| | | |||   |||||||||| ||||||||||| |||    |||||| ||| |||||||    
T  39301102 aaagttgttgtcatgttactgaaaggtcacgggttcaagtcttgggaacaacctcttgtgtataaaacagggtaagga----tgcgtataatgcaccaaa 39301197  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    || ||||||||||||||||||||||| |||||| ||||| ||| ||||||||    
T  39301198 aa-ggtgggaccccttcccggaccctccgtatgtgggag-tttagtgcaccg 39301247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 12006401 - 12006329
Alignment:
Q  89 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 161  Q
    |||||||||| ||||||||||||||||||| |||||||| |||| ||||||||| |||||||| | |||||||    
T  12006401 aatacaccaataatggtgggaccccttcccagaccctgcctatgcgggagctttagtgcaccgtgttgccctt 12006329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 77 - 161
Target Start/End: Original strand, 20135656 - 20135740
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 161  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||| || ||||  |||||||  |||||||| | |||||||    
T  20135656 aaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcaggagcttcagtgcaccgggttgccctt 20135740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 3771414 - 3771476
Alignment:
Q  102 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    ||||||||||||||||||||| ||| ||||| ||||||||| |||||||| ||||||||||||    
T  3771414 tggtgggaccccttcccggactctgtgtatgtgggagctttagtgcaccgggctgccctttta 3771476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 151
Target Start/End: Original strand, 7368413 - 7368520
Alignment:
Q  37 aagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgaggg 136  Q
    ||||||| ||||| | ||||||||||||| |||||||    |||||||||| ||||||||||   |||||||||||||||||||||||||| |||| |||    
T  7368413 aagtcctggaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaat--tggtgggaccccttcccggaccctgcatatgtggg 7368505  T
Q  137 agctttggtgcaccg 151  Q
    |||| | ||||||||    
T  7368506 agctctagtgcaccg 7368520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 163
Target Start/End: Complemental strand, 12477204 - 12477119
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||  |||||||||   ||||||| ||||||| | ||||||||||    
T  12477204 aaggctgcgtacaatacaccaaaa-tggtgggaccccttcccggattctgcgtatgcaagagctttagtgcacccaactgccctttt 12477119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 22600433 - 22600569
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||| ||||||||||| || |  |||||| |||||||| |||||  | | |||||||||| ||||||||    |||||| ||| |||||||||||    
T  22600433 aaagttgttatcatgtgactggaaggttacgggttcaagtcctggaaacaatattttgtgtaaaacacagggta----aggctgtgtacaatacaccaaa 22600528  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagcttt 142  Q
      |||||||| ||||||||||| |||||||||| |||||||||    
T  22600529 --tggtgggatcccttcccggatcctgcgtatgcgggagcttt 22600569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 162
Target Start/End: Complemental strand, 34154897 - 34154814
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||| |||| || |||| | |||||||| | ||||||||    
T  34154897 aaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcggtagctctagtgcaccgggttgcccttt 34154814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 10306546 - 10306494
Alignment:
Q  89 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagcttt 142  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  10306546 aatacaccaaaa-tggtgggaccccttcccggaccctgcgtatgcgggagcttt 10306494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 21784396 - 21784335
Alignment:
Q  98 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 159  Q
    |||||||||||||||||| |||||||||||||||| ||||| ||| |||||||||| |||||    
T  21784396 aaaatggtgggacccctttccggaccctgcgtatgcgggaggtttagtgcaccgagttgccc 21784335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 22861822 - 22861667
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| | ||||| | |||||||||||| | |||||||||||||||       | | ||| ||||  | |||||| |  ||    
T  22861822 aaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaagcagtctcttgtgtaaaa------caagtaagactgctcacaatacatc--aa 22861731  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    |||||||||||||||| || ||||||| |||| ||||||| | |||||||||  ||||||||||    
T  22861730 atggtgggaccccttctcgaaccctgcatatgcgggagctctagtgcaccgaattgccctttta 22861667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 37024710 - 37024646
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa 65  Q
    |||||||||||||||||||||||| | ||||||| |||||||| ||||| | |||||||||||||    
T  37024710 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 37024646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 16880730 - 16880658
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    ||||||||||| |||||||||||  ||||| |||| ||||||||||| |||||||| ||||||||| ||||||||    
T  16880730 aaggctgcgtacaatacaccaaa--tggtgtgaccacttcccggaccatgcgtatgcgggagctttagtgcaccg 16880658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 1565410 - 1565566
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| | | ||||| |||||||| |||||   |||||| ||||||| |   ||   ||||||||||| ||| |||||||     
T  1565410 aaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgagtaaaaaaaca-tatt-aaggctgcgtacaatgcaccaaa- 1565506  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
     ||| |||||||||||||||||||||| |||| |||||| || |||||||| | ||||||||    
T  1565507 -tggcgggaccccttcccggaccctgcatatgtgggagc-ttagtgcaccgggttgcccttt 1565566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 28516590 - 28516432
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||| ||| |||||| | ||||||| |||||| | |||||   |||||||||||||| |||| |||||    ||||||| |||||| ||||    
T  28516590 aaagttgttgtcaggtggctgaaaggtcacgggttcaagtcttggaaacatcctcttgtgtaaaaaacaggctaggg----ctgcgtacaatacatcaaa 28516495  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    | ||||||||||| ||||| ||||||||| |||  |||||||| ||| |||  | |||||||||    
T  28516494 a-tggtgggacccattcccagaccctgcgcatgcaggagctttagtggaccaggttgccctttt 28516432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 151
Target Start/End: Original strand, 1850624 - 1850763
Alignment:
Q  6 tgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggt 105  Q
    ||||||||||||||||||| | ||||||| |||||||  ||||    |||||||||||||||||  ||    ||| |||||| |||||| ||||  ||||    
T  1850624 tgttgtcatgtgactgaaaggtcacgggttcaagtcccggaaataacctcttgtgtaaaaacagaata----agggtgcgtacaatacatcaaa--tggt 1850717  T
Q  106 gggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    |||||| ||||| |||||||||| ||| || |||||| ||||||||    
T  1850718 gggaccacttcctggaccctgcggatgcggaagctttagtgcaccg 1850763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 163
Target Start/End: Original strand, 19093884 - 19093949
Alignment:
Q  98 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||  ||||||| |||||||||||||||||  |||||||| |||||||| |||||||||||    
T  19093884 aaaatggtatgacccctacccggaccctgcgtatgttggagctttagtgcaccgggctgccctttt 19093949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 16028683 - 16028623
Alignment:
Q  103 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  16028683 ggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 16028623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 162
Target Start/End: Complemental strand, 30877623 - 30877564
Alignment:
Q  103 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
    ||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||    
T  30877623 ggtgggaccccttcccggaccctgcatatgtgggagctctagtgcaccgggttgcccttt 30877564  T

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Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 165
Target Start/End: Original strand, 39801591 - 39801654
Alignment:
Q  102 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttttag 165  Q
    ||||||||||||||||| |||||| |||||| ||||||||| |||||||| | |||| ||||||    
T  39801591 tggtgggaccccttcccagaccctacgtatgcgggagctttagtgcaccgggttgccattttag 39801654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 163
Target Start/End: Complemental strand, 11657783 - 11657698
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||||||| || |||||||||||| |||||||||||||||||| |||||||  | | |||| |||| || ||||| |||||||||||    
T  11657783 aaggctgcatacaatacaccaaaa-tggtgggaccccttcccgaaccctgcacacgcgggaactttagttcaccgggctgccctttt 11657698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 10943900 - 10943844
Alignment:
Q  106 gggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||||||||||||||||  ||| ||||||||| |||||||| |||||||||||    
T  10943900 gggaccccttcccggaccctgca-atgcgggagctttagtgcaccgggctgccctttt 10943844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 21542530 - 21542489
Alignment:
Q  99 aaatggtgggaccccttcccggaccctgcgtatgagggagct 140  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  21542530 aaatggtgggaccccttcccggactctgcgtatgcgggagct 21542489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 23974759 - 23974824
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 66  Q
    ||||||||||||||||||||| || | ||||||| |||||||| |||||   ||||||||||||||    
T  23974759 aaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaa 23974824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 32354211 - 32354264
Alignment:
Q  111 cccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    |||||||||||||||| ||||| ||||||||| |||||||| | ||||||||||    
T  32354211 cccttcccggaccctgtgtatgcgggagctttagtgcaccgggttgccctttta 32354264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 114
Target Start/End: Complemental strand, 22908014 - 22907913
Alignment:
Q  7 gttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtg 106  Q
    ||||| |||||||||||| | || |||| ||||||| |||||| | ||||||||||||||||| ||    |||| ||| || ||||||||  ||||||||    
T  22908014 gttgttatgtgactgaaaggtcaagggttcaagtccaagaaacagcctcttgtgtaaaaacagagt----aaggttgcatacaatacacc--aaatggtg 22907921  T
Q  107 ggacccct 114  Q
    ||||||||    
T  22907920 ggacccct 22907913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 156
Target Start/End: Complemental strand, 4654479 - 4654421
Alignment:
Q  98 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctg 156  Q
    |||||||||||| |||||| || ||||||| |||| ||||||||| ||||||| |||||    
T  4654479 aaaatggtgggatcccttctcgaaccctgcatatgcgggagctttagtgcaccaagctg 4654421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 13774949 - 13774998
Alignment:
Q  111 cccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccct 160  Q
    ||||| |||||||||||||||| ||||||||| |||||||| ||| ||||    
T  13774949 ccctttccggaccctgcgtatgcgggagctttagtgcaccgggctaccct 13774998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 22187264 - 22187329
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 66  Q
    |||||||||||||| ||||||||| | ||| |||  ||||||| ||||| | ||||||||||||||    
T  22187264 aaagttgttgtcatttgactgaaaggtcaccggtttaagtcctggaaacagcctcttgtgtaaaaa 22187329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 24903756 - 24903695
Alignment:
Q  102 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||| ||||||||||||||| |||| || | |||| ||||||||||||| |||| ||||||    
T  24903756 tggtgagaccccttcccggacactgcatacgcgggaactttggtgcaccgggctgtcctttt 24903695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 39079823 - 39079755
Alignment:
Q  89 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcc 158  Q
    |||||||||||| |||||||||||||||||||||| || ||||  ||||| ||| |||||| | ||||||    
T  39079823 aatacaccaaaa-tggtgggaccccttcccggaccatgtgtatacgggagttttagtgcacagggctgcc 39079755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 42924917 - 42924841
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccgg--accctgcgtatgagggagctttggtgcaccg 151  Q
    |||| |||||| ||||||||||||||| ||| | |||||||| |  |||||||||||| || |||||| ||||||||    
T  42924917 aaggttgcgtacaatacaccaaaaatgatggaatcccttcccagacaccctgcgtatgcggaagctttagtgcaccg 42924841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 164
Target Start/End: Complemental strand, 24313645 - 24313570
Alignment:
Q  89 aatacaccaaaaatggtgggaccccttcccgg-accctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    |||||||||||| |||||||||||||||||||  || || |||||  | |||||| |||||||| ||||||||||||    
T  24313645 aatacaccaaaa-tggtgggaccccttcccggcgccatgtgtatgctgtagctttagtgcaccgggctgccctttta 24313570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 164
Target Start/End: Complemental strand, 24355982 - 24355907
Alignment:
Q  89 aatacaccaaaaatggtgggaccccttcccgg-accctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    |||||||||||| |||||||||||||||||||  || || |||||  | |||||| |||||||| ||||||||||||    
T  24355982 aatacaccaaaa-tggtgggaccccttcccggcgccatgtgtatgctgtagctttagtgcaccgggctgccctttta 24355907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 30006397 - 30006449
Alignment:
Q  99 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    ||||||||||||||||||||||  |||  ||||| ||||||||| ||||||||    
T  30006397 aaatggtgggaccccttcccggggcctatgtatgcgggagctttagtgcaccg 30006449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 34074717 - 34074653
Alignment:
Q  2 aagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 66  Q
    ||||||||||||  ||||||||| | |||  || |||||||||||||| | ||||||||||||||    
T  34074717 aagttgttgtcacatgactgaaaggtcacaagttcaagtcctagaaacagcctcttgtgtaaaaa 34074653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 7e-42; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 5 - 163
Target Start/End: Complemental strand, 29356009 - 29355854
Alignment:
Q  5 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaa-aaacagggtagggaaggctgcgtaaaatacaccaaaaatg 103  Q
    |||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||| ||||||||||    |||||||||| |||||||||| ||||    
T  29356009 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggta----aggctgcgtacaatacaccaataatg 29355914  T
Q  104 gtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||| | |||||||||    
T  29355913 gtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 29355854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 12222073 - 12221913
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||||||| | ||||||| |||||| | ||||| | |||||||||||||| |||||||    |||||||||| ||||||||||     
T  12222073 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaat 12221978  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagc-tttggtgcaccgagctgccctttt 163  Q
    ||||||||||||||||||||||||||||||||| |||||| ||| |||||||| | |||||||||    
T  12221977 aatggtgggaccccttcccggaccctgcgtatgcgggagcttttagtgcaccgggttgccctttt 12221913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 9161102 - 9161260
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| | ||| ||| |||||||| ||||| | ||||||||||||||||| |||    |||||||||| |||||| ||| |    
T  9161102 aaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaacagagta----aggctgcgtacaatacatcaata 9161197  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||||||||||||||| ||||||||||||||| || |||||| |||||||  | |||||||||    
T  9161198 atggtgggaccccttctcggaccctgcgtatgcggaagctttagtgcaccaggttgccctttt 9161260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 1354911 - 1354755
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| | ||| ||| |||||||| ||||| | ||||||||||||| |||||||    |||||||||| |||||||||||     
T  1354911 aaagttgttgtcatgtgactgaaaggtcactggttcaagtcctggaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa- 1354818  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
     |||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||||    
T  1354817 -tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttta 1354755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 1346943 - 1347098
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| | ||||||| |||||||| ||||| | | ||||||||||| |||||||    |||||||||| |||||||||||     
T  1346943 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagccacttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa- 1347036  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
     |||||||||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  1347037 -tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 1347098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 2166568 - 2166409
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||| |||||||||||| | ||||||| |||||||| |||||   ||||||||||||| ||||| ||    ||| |||||| ||||||||||     
T  2166568 aaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggata----aggttgcgtacaatacaccaat 2166473  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||||||||||||||||||||   |||  ||||||||| |||||||| | |||||||||    
T  2166472 aatggtgggaccccttcccggaccctatatattcgggagctttagtgcaccgggttgccctttt 2166409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 2178201 - 2178042
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||| |||||||||||| | ||||||| |||||||| |||||   ||||||||||||| ||||| ||    ||| |||||| ||||||||||     
T  2178201 aaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggata----aggttgcgtacaatacaccaat 2178106  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||||||||||||||||||||   |||  ||||||||| |||||||| | |||||||||    
T  2178105 aatggtgggaccccttcccggaccctatatattcgggagctttagtgcaccgggttgccctttt 2178042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 81 - 164
Target Start/End: Original strand, 12885967 - 12886050
Alignment:
Q  81 ctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    ||||||| ||||||| |||||||||||||||||||||| ||||||||||||| ||||||||| |||||||| | ||||||||||    
T  12885967 ctgcgtacaatacacaaaaaatggtgggaccccttcccagaccctgcgtatgtgggagctttagtgcaccgggttgccctttta 12886050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 82 - 163
Target Start/End: Original strand, 12892064 - 12892145
Alignment:
Q  82 tgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||||| |||||||||| ||||||||||||||||||||||||| || |||| ||||||||| |||||||| | |||||||||    
T  12892064 tgcgtataatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgccctttt 12892145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 162
Target Start/End: Complemental strand, 7947455 - 7947371
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
    ||||||||||| |||||||||||| ||||||| |||||||||||||| |||||||| ||||||||| ||||||   ||||||||||    
T  7947455 aaggctgcgtacaatacaccaaaa-tggtgggcccccttcccggaccttgcgtatgtgggagctttagtgcacttggctgcccttt 7947371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 3815233 - 3815088
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggta-gggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||||||| | ||||||| |||||||| ||||| | || |||||||||||     || || | | ||||||| ||||||||  |    
T  3815233 aaagttgttgtcatgtgactgaaatgtcacgggttcaagtcctggaaacagactattgtgtaaaaa----atatggtacgactgcgtacaatacacc--a 3815140  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    ||||||||||||| |||||| ||||| |||||| || |||||| ||||||||    
T  3815139 aatggtgggaccctttcccgaaccctacgtatgcggaagctttagtgcaccg 3815088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 100 - 163
Target Start/End: Original strand, 6808468 - 6808531
Alignment:
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||||||||||||||||||||| ||||| ||||||||| |||||||| | |||||||||    
T  6808468 aatggtgggaccccttcccggaccctgtgtatgcgggagctttagtgcaccgggttgccctttt 6808531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 13905135 - 13904984
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||||||| | ||||||  ||||||||  |||||  |||||||||| ||||||||||    |||||||| || ||| ||||  |    
T  13905135 aaagttgttgtcatgtgactgaaaggtcacgggctcaagtcctgaaaacgacctcttgtgtaaaaaacagggt----aaggctgcatacaattcacc--a 13905042  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 159  Q
    |||||| |||||| |||||| ||||||||||| | |||||||| |||||||| |||||||    
T  13905041 aatggt-ggaccctttcccgaaccctgcgtatcacggagcttt-gtgcaccgggctgccc 13904984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 101 - 164
Target Start/End: Complemental strand, 23930188 - 23930125
Alignment:
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    |||||||||||||||| |||||||||| |||| ||||||||| |||||||||| ||||||||||    
T  23930188 atggtgggaccccttcacggaccctgcttatgcgggagctttagtgcaccgagttgccctttta 23930125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 151
Target Start/End: Complemental strand, 3116202 - 3116140
Alignment:
Q  89 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    |||||||||||||||||||||||||||| |||||| |||||||| ||||||||| || |||||    
T  3116202 aatacaccaaaaatggtgggaccccttctcggaccttgcgtatgcgggagctttagtacaccg 3116140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 10734965 - 10734905
Alignment:
Q  102 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
    ||||||| ||||||||||||||||||||||| ||||||||| || ||||| ||||||||||    
T  10734965 tggtgggcccccttcccggaccctgcgtatgcgggagctttagtccaccgggctgcccttt 10734905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 13267797 - 13267861
Alignment:
Q  99 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||||||||||||| |||||||||||||| ||||||||  |||||||| | |||||||||    
T  13267797 aaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccgggttgccctttt 13267861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 162
Target Start/End: Original strand, 17432332 - 17432483
Alignment:
Q  14 tgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggta--gggaaggctgcgtaaaatacaccaaaaatggtgggac 110  Q
    ||||||||||| | ||| ||| |||||||| |||||    |||||||| ||||||||||||  || ||||||| ||| ||||||| |||||||||| |||    
T  17432332 tgtgactgaaaggtcacaggttcaagtcctggaaacaacatcttgtgtaaaaaacagggtaagggtaaggctgtgtacaatacactaaaaatggtgagac 17432431  T
Q  111 cccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
    |  |||||||| |||| | ||| ||||||||| |||||||| | ||||||||    
T  17432432 cttttcccggatcctgtgcatgcgggagctttagtgcaccgggttgcccttt 17432483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 6024212 - 6024332
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||| || || | ||||| | ||| |||||||||| | |||||||||||||| || ||||    || ||||||| ||||||||||     
T  6024212 aaagttgttgtcatgtgattggaaggtcacggtttcaaatcctagaaacagcctcttgtgtaaaaaacatggta----agactgcgtacaatacaccaat 6024307  T
Q  100 aatggtgggaccccttcccggaccc 124  Q
    |||| ||||||| ||||||||||||    
T  6024308 aatgatgggacctcttcccggaccc 6024332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 77 - 163
Target Start/End: Original strand, 26097210 - 26097294
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||||| |||||||||||  ||  |||||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  26097210 aaggctgcgtacaatacaccaaa--tgaagggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 26097294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 11395836 - 11395895
Alignment:
Q  102 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
    |||||||||||||||||||| |||||||||| ||||||||| || ||||| ||||||||||    
T  11395836 tggtgggaccccttcccggatcctgcgtatgcgggagctttagtccaccg-gctgcccttt 11395895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 14553491 - 14553626
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||| ||| | ||| ||| |||||||| ||||  |  |||||||||||||     ||||| ||||||| ||| |||||||||||    
T  14553491 aaagttgttgtcatgtgact-aaaggtcacaggttcaagtcctggaaatagcttcttgtgtaaaaaa----tagggtaaggctgtgtataatacaccaaa 14553585  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagct 140  Q
    | |||||||||||||||   ||||||| ||||| |||||||    
T  14553586 actggtgggaccccttcgtagaccctgtgtatgcgggagct 14553626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 142
Target Start/End: Original strand, 24097649 - 24097692
Alignment:
Q  99 aaatggtgggaccccttcccggaccctgcgtatgagggagcttt 142  Q
    |||||||||||||||||||||||||||||||||| || ||||||    
T  24097649 aaatggtgggaccccttcccggaccctgcgtatgcggaagcttt 24097692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 24734694 - 24734749
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatg 132  Q
    |||| |||||| |||||| |||||| ||||||||||||||||||| ||||||||||    
T  24734694 aaggttgcgtacaatacaacaaaaaaggtgggaccccttcccggatcctgcgtatg 24734749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 163
Target Start/End: Original strand, 25557775 - 25557859
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||||| |||||||||||  ||  || ||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  25557775 aaggctgcgtacaatacaccaaa--tgaaggaaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 25557859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 151
Target Start/End: Complemental strand, 14975163 - 14975101
Alignment:
Q  89 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    |||||||||| |||||||||||||||||||| |||| || |||| ||||| ||| ||||||||    
T  14975163 aatacaccaataatggtgggaccccttcccgaaccccgcatatgcgggagttttagtgcaccg 14975101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 8409222 - 8409287
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 66  Q
    ||||||||||| |||||||||||| | ||||| | |||||||| ||||| | ||||||||||||||    
T  8409222 aaagttgttgtaatgtgactgaaaggtcacggattcaagtcctggaaactgcctcttgtgtaaaaa 8409287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 14975236 - 14975171
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 66  Q
    ||||||||||||||||||||| || | ||||| | |||||||| ||||| | ||||||||||||||    
T  14975236 aaagttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcctcttgtgtaaaaa 14975171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 160
Target Start/End: Complemental strand, 15866102 - 15866041
Alignment:
Q  99 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccct 160  Q
    ||||||||||||||||||||||||||||||| || |||| || | |||||| ||| ||||||    
T  15866102 aaatggtgggaccccttcccggaccctgcgtttgcgggatctatagtgcactgagttgccct 15866041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 142
Target Start/End: Original strand, 32579497 - 32579540
Alignment:
Q  99 aaatggtgggaccccttcccggaccctgcgtatgagggagcttt 142  Q
    |||||||||||||||||||| |||||||| |||| |||||||||    
T  32579497 aaatggtgggaccccttcccagaccctgcatatgcgggagcttt 32579540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 118
Target Start/End: Complemental strand, 2755507 - 2755466
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttccc 118  Q
    ||||||||||| |||||||||||||||||||||  |||||||    
T  2755507 aaggctgcgtacaatacaccaaaaatggtgggagtccttccc 2755466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 12063446 - 12063511
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 66  Q
    ||||||||| ||||| |||||||| | ||||||| |||||||||||||  | ||||||| ||||||    
T  12063446 aaagttgttatcatgagactgaaaggtcacgggttcaagtcctagaaatagcctcttgtataaaaa 12063511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 12889405 - 12889562
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||| |||| ||||| | ||| ||| |||||| |  |||| | ||||||||| |||||||||| |    ||||||| || |||||||| ||    
T  12889405 aaagttgttgtcacgtgagtgaaaggtcacaggttcaagtcttgaaaacagcctcttgtgttaaaaacagggca----aggctgcatacaatacacctaa 12889500  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
    |  | ||||||||||| |||||||||  || || ||||||||| ||||| || ||||||||||    
T  12889501 ac-gatgggacccctttccggaccctctgtgtgtgggagctttagtgcatcgggctgcccttt 12889562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 33922984 - 33922935
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacg 50  Q
    |||||||||||||| ||||||||| | ||| ||| |||||||||||||||    
T  33922984 aaagttgttgtcatttgactgaaaagtcacaggttcaagtcctagaaacg 33922935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 383837 - 383760
Alignment:
Q  83 gcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
    ||||| |||||||||||  | ||||||||||||| | ||||||||||||| ||||||||  || ||||| | ||||||||    
T  383837 gcgtacaatacaccaaa--ttgtgggaccccttctcagaccctgcgtatgcgggagcttcagtccaccgggttgcccttt 383760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 7e-39; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 13160681 - 13160836
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    ||||||||||||||||||||| || | ||||||| |||||||||||||| | ||||||||||||||||||||    ||||||||||| ||||||||  ||    
T  13160681 aaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaacagggt----aaggctgcgtacaatacacc--aa 13160774  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
    |||||||||||||||||||||||||||||||| ||||||||  |||| ||| | ||||||||    
T  13160775 atggtgggaccccttcccggaccctgcgtatgcgggagcttcagtgcgccgggttgcccttt 13160836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 39461152 - 39460992
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||||| |||||||| | ||||||| |||||||| ||||| | |||||||||||||| ||| |||    |||||||||| ||||||||||     
T  39461152 aaagttgttgtcatgagactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagta----aggctgcgtacaatacaccaat 39461057  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    ||||||| ||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||||    
T  39461056 aatggtgagaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttta 39460992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 21070858 - 21070708
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||| |||||| |     || ||||||||||| |||||||||| |    
T  21070858 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaaaaaaagggtaaggctgcgtacaatacaccaata 21070759  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    |||||||||||||||||||||||||||||||| ||||| ||| ||||||||    
T  21070758 atggtgggaccccttcccggaccctgcgtatgcgggagttttagtgcaccg 21070708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 20284229 - 20284080
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||| |||||| |    |||| ||||||||||| ||||||||||     
T  20284229 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaaaaa--agggtaaggctgcgtacaatacaccaat 20284132  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    ||||||||||||||||||||||||||||||||| ||||| ||| ||||||||    
T  20284131 aatggtgggaccccttcccggaccctgcgtatgcgggagttttagtgcaccg 20284080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 36720775 - 36720933
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||||||||||| || | ||||||| |||||||| ||||| | |||||||||||||| |||||||    |||||||||| |||||||||||    
T  36720775 aaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaaa 36720870  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
      ||||||||||||||||||||||||||||||| || |||||| |||||||  | ||||||||||    
T  36720871 --tggtgggaccccttcccggaccctgcgtatgcggaagctttagtgcacccggttgccctttta 36720933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 28817782 - 28817625
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||||||||||| || | ||||||| |||||||| ||||| | |||||||||||||| |||||||    |||||||||| |||||||| ||    
T  28817782 aaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacacccaa 28817687  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
      ||||||||||||||||||||||||||||||| ||||||||| ||||| || | |||||||||    
T  28817686 --tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcatcgggttgccctttt 28817625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 35261658 - 35261815
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||||||||||| || | ||||||| |||| ||| ||||| |||||||||||||||| |||||||    ||| |||||| |||||||||||    
T  35261658 aaagttgttgtcatgtgactggaaggtcacgggttcaagccctggaaacagtctcttgtgtaaaaaacagggta----aggttgcgtacaatacaccaaa 35261753  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
      |||||||||||||||| |||||||||||||| ||||||||| |||||||| | |||||||||    
T  35261754 --tggtgggaccccttcctggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 35261815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 12670404 - 12670261
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||| ||||||||||    ||||||||||| ||||||||  ||    
T  12670404 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacagggt----aaggctgcgtacaatacacc--aa 12670312  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    ||||||||||||||||||||||||||| |||| ||||||| | ||||||||    
T  12670311 atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccg 12670261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 45071244 - 45071398
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||| || || | ||||||| ||||| || ||||| | |||||||||||||||||||||    |||||||||| |||||||||||     
T  45071244 aaagttgttgtcatgtgattgtaaggtcacgggttcaagttctggaaacagcctcttgtgtaaaaacagggta----aggctgcgtacaatacaccaaa- 45071338  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 161  Q
     |||||||||||||||||||||| |||||||| ||||||||  |||||||| | |||||||    
T  45071339 -tggtgggaccccttcccggaccttgcgtatgcgggagcttcagtgcaccgggttgccctt 45071398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 7136685 - 7136538
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaac-agggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||||||||||| || | || |||| |||||||| |||||   ||||||||||||||| ||||||    |||||||||| ||||||||||     
T  7136685 aaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaccagggta----aggctgcgtacaatacaccaat 7136590  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    ||||||||||||||||||||||||| || |||| ||||||||| ||||||||    
T  7136589 aatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccg 7136538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 30454251 - 30454096
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||||| || ||||    ||||||||||  ||||||||||     
T  30454251 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-caaggta----aggctgcgtacgatacaccaaa- 30454158  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
     |||||||||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  30454157 -tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 30454096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 24365216 - 24365078
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacaccaa 98  Q
    |||||||||||||||||||| ||| | ||||||| |||| ||||||||| | ||||||||||||||  |||||||    |||||||| | ||||||||||    
T  24365216 aaagttgttgtcatgtgactaaaatgtcacgggttcaagccctagaaacagcctcttgtgtaaaaaatcagggta----aggctgcgaacaatacaccaa 24365121  T
Q  99 aaatggtgggaccccttcccggaccctgcgtatgagggagctttg 143  Q
    |  ||||||||||||||||||||||||||||||| ||||||||||    
T  24365120 a--tggtgggaccccttcccggaccctgcgtatgtgggagctttg 24365078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 44781662 - 44781506
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||| ||||||||||   ||||||| |||||||| |||||   ||||||||||||| ||||||||    |||||| ||| |||||||||||    
T  44781662 aaagttgttgtcacgtgactgaaagttcacgggttcaagtcctggaaacaacctcttgtgtaaaagacagggta----aggctgtgtacaatacaccaaa 44781567  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccct 160  Q
    |||| ||||||||| |||| ||||||||||||| ||||||||| |||||| | ||||||||    
T  44781566 aatgttgggaccccgtcccagaccctgcgtatgcgggagctttagtgcactgtgctgccct 44781506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 6760801 - 6760960
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||| |||||  || | ||||||| |||||||| ||||| | |||||||||||||| |||||||    ||||| |||| ||||||||||     
T  6760801 aaagttgttgtcatatgactagaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggcttcgtacaatacaccaat 6760896  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||||||||||| ||||||| || |||| ||||||||| |||||||| | |||||||||    
T  6760897 aatggtgggaccccttctcggaccccgcatatgcgggagctttagtgcaccgggttgccctttt 6760960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 2 - 151
Target Start/End: Complemental strand, 18164914 - 18164771
Alignment:
Q  2 aagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaa 101  Q
    ||||||||||||||||||||||| | ||||||| |||||||| ||||| | |||||||||||||||||||||    ||| |||||| |||||||||||      
T  18164914 aagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggta----aggttgcgtacaatacaccaaag- 18164820  T
Q  102 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
     | || ||||  ||||||||||||||||||| ||||||||| ||||||||    
T  18164819 -gatgtgaccatttcccggaccctgcgtatgcgggagctttagtgcaccg 18164771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 17823555 - 17823711
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||||||||| |||| | ||||||| |||||||| ||||| | |||||||||||||| |||| |    ||| ||||||||||||||||  |    
T  17823555 aaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaccaggat----aagactgcgtaaaatacacc--a 17823648  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
    |||||||| ||||||||||| ||||||| ||||  |||||||| |||||||| | ||||||||    
T  17823649 aatggtggaaccccttcccgaaccctgcatatgcaggagctttagtgcaccgggttgcccttt 17823711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 26954111 - 26954272
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacaccaa 98  Q
    |||||||||||||||||| |  || | ||||||| |||||||| ||||| | ||||||||||||||  |||||||    |||||||||| ||||||||||    
T  26954111 aaagttgttgtcatgtgattagaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaacagggta----aggctgcgtacaatacaccaa 26954206  T
Q  99 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
     ||||||||||||||||||| ||||  || |||| ||||||||| |||||| | | ||||||||||    
T  26954207 taatggtgggaccccttcccagacctcgcatatgcgggagctttagtgcactgggttgccctttta 26954272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 44530128 - 44530286
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||| ||||||||||||  || | ||||||| |||||| | |||||   |||||||||||||| |||||||    |||||||||| |||||||||||    
T  44530128 aaagttgctgtcatgtgactagaaggtcacgggttcaagtcttggaaacaacctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaaa 44530223  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
      |||||||||||||||| |||||||||||||| ||||||||| |||||||| | || |||||||    
T  44530224 --tggtgggaccccttcctggaccctgcgtatgcgggagctttagtgcaccgggttgacctttta 44530286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 40 - 163
Target Start/End: Original strand, 20869941 - 20870061
Alignment:
Q  40 tcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggag 138  Q
    |||| ||||| |||||||||||||||| |||||||    |||||||||| |||||||||| |||||||||||||||||| |||||| || |||| |||||    
T  20869941 tcctggaaacagtctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaataatggtgggaccccttccaggaccccgcatatgcgggag 20870036  T
Q  139 ctttggtgcaccgagctgccctttt 163  Q
    |||| |||||||| | |||||||||    
T  20870037 ctttagtgcaccgggttgccctttt 20870061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 29521841 - 29521696
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||| |||||||| || | ||||||| |||||||| ||||| | ||||||| |||||| |||||||    |||||||||| |||||||||||    
T  29521841 aaagttgttgtcgtgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtttaaaaaacagggta----aggctgcgtacaatacaccaaa 29521746  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
      |||||||| ||| |||| ||||||||||||| ||||||||| ||||||||    
T  29521745 --tggtgggaacccatcccagaccctgcgtatgcgggagctttagtgcaccg 29521696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 163
Target Start/End: Complemental strand, 5135418 - 5135289
Alignment:
Q  28 cacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgc 127  Q
    ||||||| |||||||| ||||| | |||||||||||||| || |  || ||||||| ||| |||||||||||  ||||||||||||||||||||||||||    
T  5135418 cacgggttcaagtcctggaaacagcctcttgtgtaaaaa-agag--ggtaaggctgtgtacaatacaccaaa--tggtgggaccccttcccggaccctgc 5135324  T
Q  128 gtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||||  |||||||| |||||||| |||||||||||    
T  5135323 gtatgcaggagcttt-gtgcaccgggctgccctttt 5135289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 20869652 - 20869523
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||| ||||||||||    ||||||| ||| ||||||||||      
T  20869652 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacagggt----aaggctgtgtacaatacaccaa-- 20869560  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagc 139  Q
      |||| |||||||||||||||||||| |||| ||||||    
T  20869559 --ggtgagaccccttcccggaccctgcatatgcgggagc 20869523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 2626498 - 2626645
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    ||||||||||||||||||| |||| | ||||||| |||||||| ||||| | |||||||||||||| |     || ||| ||||||| |||||||||||     
T  2626498 aaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaaaacagggtaagactgcgtacaatacaccaaa- 2626596  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 150  Q
     || |||||||||||||| |||||||| |||| ||||||||  |||||||    
T  2626597 -tgatgggaccccttcccagaccctgcatatgcgggagcttcagtgcacc 2626645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 25250501 - 25250660
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaa-ggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||||||||||| || | |||  || |||||||| ||||| | || |||||||||||     ||||| | ||||||||| ||||||||||     
T  25250501 aaagttgttgtcatgtgactggaaggtcacatgttcaagtcctggaaacagcctattgtgtaaaaaa----tagggtatggctgcgtacaatacaccaat 25250596  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||||||||||||||||||| |||| || |||| ||||| ||| |||||||| | |||||||||    
T  25250597 aatggtgggaccccttcccgaaccccgcatatgcgggagatttagtgcaccgggttgccctttt 25250660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 77 - 160
Target Start/End: Original strand, 29877146 - 29877227
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccct 160  Q
    ||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| |||||| || |||||||  ||||||||    
T  29877146 aaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagcgttagtgcaccaggctgccct 29877227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 24245430 - 24245564
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacacc-aaa 99  Q
    |||||||||||||||||||||||| | ||||||| |||||||| ||||| ||||||| |||   ||||||||    ||| || |||| ||| |||| |||    
T  24245430 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaac-gtctcttatgt---aacagggt----aagactacgtacaatgcaccaaaa 24245521  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagcttt 142  Q
    ||| |||||||||||||| |||||||||||||| |||||||||    
T  24245522 aattgtgggaccccttcctggaccctgcgtatgcgggagcttt 24245564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 12625868 - 12626027
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacaccaa 98  Q
    |||||||||||| |||||||   | | ||||||  |||||||| |||||   ||||||||||||||  |||||||    || |||| || ||||||||||    
T  12625868 aaagttgttgtcgtgtgacttgtaggtcacgggctcaagtcctggaaacaacctcttgtgtaaaaaaacagggta----agactgcatacaatacaccaa 12625963  T
Q  99 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    |  |||||||||||| |||||||||||||||||| ||||||||| |||||||| | ||||||||||    
T  12625964 a--tggtgggaccccctcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttta 12626027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 42083851 - 42083699
Alignment:
Q  5 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatgg 104  Q
    ||||||||| |||||||||| | ||||||| |||||||| ||||| | || |||||||||||  |||   | ||||||||||| | || ||||||| |||    
T  42083851 ttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaatggg---gcaaggctgcgtacagtataccaaaa-tgg 42083756  T
Q  105 tgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 161  Q
    ||||||||||||||| |||||| ||| | ||||||||| |||||  | |||||||||    
T  42083755 tgggaccccttcccgaaccctgtgtacgtgggagctttagtgcattgggctgccctt 42083699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 17250960 - 17250888
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcac 149  Q
    ||||| ||||| |||||||||| ||||||||||||| |||||| ||||||||||||| |||||||| ||||||    
T  17250960 aaggcagcgtacaatacaccaataatggtgggaccctttcccgaaccctgcgtatgaaggagctttagtgcac 17250888  T

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Target: chr8; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 28407395 - 28407467
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggta 73  Q
    ||||||||||||||||||||| || | ||||||| |||||||| ||||| | |||||||||||||||||||||    
T  28407395 aaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggta 28407467  T

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Target: chr8; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 8897920 - 8897763
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||||||||| | || | |||||||  ||||||| |||||   | ||||||||||||     ||||| |||||| |||| |||||||||||    
T  8897920 aaagttgttgtcatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaa----tagggtaaggctacgtacaatacaccaaa 8897825  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
      |||||||||||||||||||||||||| |||| |||||||||  ||||||  | |||||||||    
T  8897824 --tggtgggaccccttcccggaccctgcatatgcgggagctttactgcacccggttgccctttt 8897763  T

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Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 16225075 - 16225145
Alignment:
Q  81 ctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    ||||||| |||||||||| |||||||||| |||||||||||||| || |||| ||||||||| ||||||||    
T  16225075 ctgcgtacaatacaccaataatggtgggatcccttcccggaccccgcatatgcgggagctttagtgcaccg 16225145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 82 - 151
Target Start/End: Original strand, 16013511 - 16013580
Alignment:
Q  82 tgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    |||||| ||||||| |||||||||| ||||||||||| |||||||| |||| ||||||||| ||||||||    
T  16013511 tgcgtacaatacactaaaaatggtgcgaccccttcccagaccctgcctatgcgggagctttagtgcaccg 16013580  T

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Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 106 - 163
Target Start/End: Original strand, 40444845 - 40444902
Alignment:
Q  106 gggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||||||||| ||||||||||||||||  |||||||| ||||||||||||||||||||    
T  40444845 gggaccccttgccggaccctgcgtatgttggagctttagtgcaccgagctgccctttt 40444902  T

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Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 26102589 - 26102653
Alignment:
Q  99 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||||||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  26102589 aaatggtgggaccccttcccggaccctgcttatgcgggagctctagtgcaccgggttgccctttt 26102653  T

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Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 164
Target Start/End: Original strand, 31457155 - 31457309
Alignment:
Q  4 gttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatg 103  Q
    |||||||||||||| |||||| | ||||||| ||||||||  ||||   |||||||||||||| |||  |    |||||||||| |||||| ||||  ||    
T  31457155 gttgttgtcatgtggctgaaaggtcacgggttcaagtcctgtaaacaacctcttgtgtaaaaataggaaa----aggctgcgtacaatacatcaaa--tg 31457248  T
Q  104 gtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    || ||||||||||||  |||||||||||| ||||||| | ||||||||   ||||||||||    
T  31457249 gtaggaccccttcccaaaccctgcgtatgcgggagctctagtgcaccggattgccctttta 31457309  T

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Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 5689683 - 5689755
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    ||||||||||| |||||||||||  |||||| ||||||||||| ||| |||||||| ||||||||| ||||||||    
T  5689683 aaggctgcgtacaatacaccaaa--tggtggaaccccttcccgaaccatgcgtatgtgggagctttagtgcaccg 5689755  T

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Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 28407475 - 28407538
Alignment:
Q  99 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
    ||||||||||||||||||||||||||| |||||| |||||||||  ||||||| | ||||||||    
T  28407475 aaatggtgggaccccttcccggaccctacgtatgcgggagctttactgcaccgggttgcccttt 28407538  T

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Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 27507985 - 27508034
Alignment:
Q  102 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    |||||||||||||||||| |||||||||||| ||||||||| ||||||||    
T  27507985 tggtgggaccccttcccgaaccctgcgtatgcgggagctttagtgcaccg 27508034  T

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Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 43942376 - 43942417
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttccc 118  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  43942376 aaggctgcgtacaatacaccaaaaatggtgggaccccttccc 43942417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 35107374 - 35107310
Alignment:
Q  99 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||||||||||||||||||||||| ||| ||||| || |||||| |||||||| | |||||||||    
T  35107374 aaatggtgggaccccttcccggacgctgtgtatgcggaagctttagtgcaccgggttgccctttt 35107310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 8484021 - 8483949
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    ||||||||||| ||||||||||   |||||||||||| |||| ||||||||||||| ||||||||| | ||||||    
T  8484021 aaggctgcgtacaatacaccaat--tggtgggaccccatcccagaccctgcgtatgcgggagctttagggcaccg 8483949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 11748282 - 11748406
Alignment:
Q  5 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatg 103  Q
    |||||||||||||||||||| | ||||||| |||||| | ||||| | ||||| |||||||| |||||||    || | ||||| |||| || |||||||    
T  11748282 ttgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttttgtaaaaagcagggta----agacagcgtacaatatacaaaaaatg 11748377  T
Q  104 gtgggaccccttcccggaccctgcgtatg 132  Q
    || ||||||||||||| | ||||| ||||    
T  11748378 gtaggaccccttcccgaatcctgcatatg 11748406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 23000365 - 23000260
Alignment:
Q  8 ttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgg 107  Q
    ||||||||||||||||| | |||||||  ||||||| ||||| | |||||||||||||||| |||    |||| | | || ||||||||  |||||||||    
T  23000365 ttgtcatgtgactgaaaggtcacgggt--aagtcctggaaacagcctcttgtgtaaaaacacggt----aaggttccatacaatacacc--aaatggtgg 23000274  T
Q  108 gaccccttcccgga 121  Q
    ||||||||||||||    
T  23000273 gaccccttcccgga 23000260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 163
Target Start/End: Complemental strand, 27468141 - 27468091
Alignment:
Q  113 cttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||||||||||||||||||| ||||||||| |||||||| | |||||||||    
T  27468141 cttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 27468091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 44742602 - 44742529
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    ||||||||||| |||||||||||| |||||||||||||||  ||||||| || ||| |||||| || ||||||||    
T  44742602 aaggctgcgtacaatacaccaaaa-tggtgggaccccttcttggaccctacggatgcgggagcattagtgcaccg 44742529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 19729392 - 19729462
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcac 149  Q
    ||||||| ||| |||||||||||  |||||||||||||||||||||||||| |||  ||||||| | ||||||    
T  19729392 aaggctgtgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatacgggagctctagtgcac 19729462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 35105902 - 35106022
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    ||||||||||||| ||| |||||| | ||||||| |||||||| |||||   ||||||||| |||| || ||  | ||||||||||| |||||||| | |    
T  35105902 aaagttgttgtcacgtggctgaaaggtcacgggttcaagtcctggaaacaacctcttgtgt-aaaagagagt--gtaaggctgcgtacaatacacc-aga 35105997  T
Q  101 atggtgggaccccttcccggaccct 125  Q
    ||||||||||| ||||| |||||||    
T  35105998 atggtgggacctcttcctggaccct 35106022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 26457781 - 26457851
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    ||||||||||| ||||||||||   |||||||||||||  || |||| |||||||||||||||||| ||||||||    
T  26457781 aaggctgcgtacaatacaccaat--tggtgggacccct--cctgaccttgcgtatgagggagctttagtgcaccg 26457851  T

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Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 148
Target Start/End: Original strand, 18595906 - 18595959
Alignment:
Q  95 ccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgca 148  Q
    ||||||||| | |||||||||||||||||||| ||||| ||||| ||| |||||    
T  18595906 ccaaaaatgataggaccccttcccggaccctgtgtatgcgggagttttagtgca 18595959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 30962929 - 30962864
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 66  Q
    |||||||||||||||||| ||||| | ||||  | |||||||| ||||| | ||||||||||||||    
T  30962929 aaagttgttgtcatgtgattgaaaggtcacgacttcaagtcctggaaacagcctcttgtgtaaaaa 30962864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 151
Target Start/End: Original strand, 389649 - 389769
Alignment:
Q  28 cacgggtccaagtcctagaaacggtctcttgtgt---aaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccc 124  Q
    ||||||| |||||||| |||||   |||||||||   ||||||||||||    ||| |||||| |||||||||||  || ||||| ||||| || |||||    
T  389649 cacgggttcaagtcctggaaacaccctcttgtgtcaaaaaaacagggta----aggttgcgtacaatacaccaaa--tgatgggatccctttcctgaccc 389742  T
Q  125 tgcgtatgagggagctttggtgcaccg 151  Q
    |||||||| | ||||||| ||||||||    
T  389743 tgcgtatgcgagagctttagtgcaccg 389769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 36486627 - 36486567
Alignment:
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 161  Q
    ||||||||||| ||||||||||| ||||||||  |||||||| |||| ||| | |||||||    
T  36486627 atggtgggacctcttcccggaccttgcgtatgcaggagctttagtgccccgggttgccctt 36486567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 1e-37; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 30395884 - 30395724
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||||||||||  || | ||||||| |||||||| ||||| | |||||||||||||| |||||||    |||||||||| ||||||||||     
T  30395884 aaagttgttgtcatgtgactttaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaat 30395789  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    ||||||||||||||||||||||||| || |||| ||||||||| |||||||||| ||||||||||    
T  30395788 aatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgagttgccctttta 30395724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 18944645 - 18944805
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||||||| | ||| ||| |||| ||| ||||| | |||||||||||||| |||||||    |||||||||| ||||||||||     
T  18944645 aaagttgttgtcatgtgactgaaaggtcacaggttcaaggcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaac 18944740  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagc-tttggtgcaccgagctgccctttt 163  Q
    ||||||||||||||||||||||||||||||||| |||||| ||| |||||||| | |||||||||    
T  18944741 aatggtgggaccccttcccggaccctgcgtatgcgggagcttttagtgcaccgggttgccctttt 18944805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 27201649 - 27201793
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaa-aaacagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||||||| | || |||| |||||||| ||||| | ||||||||| | ||||||||||    |||||||||| |||||||||||    
T  27201649 aaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtcagaaacagggta----aggctgcgtacaatacaccaaa 27201744  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgca 148  Q
    |||||||||||||||||||||||| |||||||| ||||||||| |||||    
T  27201745 aatggtgggaccccttcccggaccttgcgtatgcgggagctttagtgca 27201793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 34725252 - 34725096
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||||| |||||||    |||||||||| ||||||| |||     
T  34725252 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacactaaa- 34725159  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
     |||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||||    
T  34725158 -tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttta 34725096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 46248109 - 46247952
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||||||| | ||||||| |||||| | ||||| | |||||||||||||| |||||||    || ||||||| |||||||||||    
T  46248109 aaagttgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggta----agactgcgtacaatacaccaaa 46248014  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
      ||||||||||||||||||||||||||||||| ||||||||| ||| |||| | |||||||||    
T  46248013 --tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgtaccgggttgccctttt 46247952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 143
Target Start/End: Original strand, 11596523 - 11596651
Alignment:
Q  9 tgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtggg 108  Q
    |||||||||||||||| | ||||||| ||||||||||||||   ||||||||||||||||||||    ||||||||||| ||||||||  ||||||||||    
T  11596523 tgtcatgtgactgaaatgtcacgggttcaagtcctagaaacaacctcttgtgtaaaaacagggt----aaggctgcgtataatacacc--aaatggtggg 11596616  T
Q  109 accccttcccggaccctgcgtatgagggagctttg 143  Q
    ||||||||| |||||||||||||| ||||||||||    
T  11596617 accccttcctggaccctgcgtatgcgggagctttg 11596651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 164
Target Start/End: Original strand, 10668239 - 10668387
Alignment:
Q  13 atgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggacc 111  Q
    |||||||||||| | ||||||| |||||||| ||||| | |||||||||||||| || ||||    ||| |||||| |||||||||| ||||||||||||    
T  10668239 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaaggta----aggttgcgtacaatacaccaataatggtgggacc 10668334  T
Q  112 ccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    ||||||||| ||||||||||| ||||||||| |||||||| | ||||||||||    
T  10668335 ccttcccggtccctgcgtatgcgggagctttagtgcaccgggttgccctttta 10668387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 20004248 - 20004088
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||||||||||| || | ||||||| |||||||| ||||| | |||| ||||||||| || ||||    |||||||||| ||||||||||     
T  20004248 aaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctctcgtgtaaaaaacaaggta----aggctgcgtacaatacaccaat 20004153  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    ||||||||||||||||||| ||||| || |||| ||||||||| |||||||| | ||||||||||    
T  20004152 aatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctttta 20004088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 27474283 - 27474440
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| | ||| ||| |||||| | ||||| ||||||||||||||||||||| |    | |||||||| |||||||  ||     
T  27474283 aaagttgttgtcatgtgactgaaaggtcacaggttcaagtcttggaaacagtctcttgtgtaaaaacagggca----aagctgcgtacaatacactgaa- 27474377  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
     ||||||||||||||||||||||||||||||| ||||||||| ||||||||   ||||||||||    
T  27474378 -tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccggattgccctttta 27474440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 35117924 - 35117765
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||| |||||||||| | ||||||| |||||||| ||||  | ||||||||||||| ||||||||    |||||| ||| |||||||||||    
T  35117924 aaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaatacagggta----aggctgtgtacaatacaccaaa 35117829  T
Q  100 aatggtgggaccccttcccggaccctgcgt-atgagggagctttggtgcaccgagctgcccttt 162  Q
    |||| ||||||||||||||||||||||||| |||  |||||||| |||||||| ||| ||||||    
T  35117828 aatgatgggaccccttcccggaccctgcgtaatgcaggagctttagtgcaccgggcttcccttt 35117765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 5 - 163
Target Start/End: Complemental strand, 38478432 - 38478281
Alignment:
Q  5 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatgg 104  Q
    |||||||||||||||||||| | ||||||| |||||||||||||| | ||||||||| ||||||||||    ||||||||||| ||||||||  ||||||    
T  38478432 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgtgt-aaaacagggt----aaggctgcgtacaatacacc--aaatgg 38478340  T
Q  105 tgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||| |||||||| |||||||||| |||| ||||||| | |||||||| | |||||||||    
T  38478339 tggaaccccttctcggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 38478281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 32632712 - 32632569
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||| ||||||||| | ||||||| |||||||| ||||| | ||||||||||||||||||||    ||||||||||| ||||||||  ||    
T  32632712 aaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggt----aaggctgcgtacaatacacc--aa 32632619  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 150  Q
    ||||||||||||||||||  ||||||| |||| ||||||||  |||||||    
T  32632618 atggtgggaccccttcccaaaccctgcatatgcgggagcttgagtgcacc 32632569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 35005139 - 35005285
Alignment:
Q  15 gtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggacccc 113  Q
    |||||||||| | ||||||| |||||| |  |||| | |||||||||||||| |||||||    ||||||| || |||||||||||||||||||||||||    
T  35005139 gtgactgaaaggtcacgggttcaagtcttgaaaacagcctcttgtgtaaaaaacagggta----aggctgcatacaatacaccaaaaatggtgggacccc 35005234  T
Q  114 ttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    ||||||||||||||||||| ||| ||||| |||||||| | ||||||||||    
T  35005235 ttcccggaccctgcgtatgcgggcgctttagtgcaccgggttgccctttta 35005285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 46991806 - 46991951
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||||||||||| || | ||||||| |||||||| |||||   |||||||||||||| |||||||    |||||| ||| |||||||| ||    
T  46991806 aaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggta----aggctgtgtacaatacaccgaa 46991901  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
      ||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  46991902 --tggtgggaccccttcccggaccctgcgtatgtgggagctttagtgcaccg 46991951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 47214513 - 47214655
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| | ||||||| |||||||| ||||| ||||||||| | ||||||||||    |||| |||||| ||||||||  ||    
T  47214513 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagtctcttgt-ttaaaacagggt----aaggttgcgtacaatacacc--aa 47214605  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 150  Q
    |||||||||||||||||| |||||||| |||| ||||||| | |||||||    
T  47214606 atggtgggaccccttcccagaccctgcatatgcgggagctctagtgcacc 47214655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 14617040 - 14617198
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaa-aacagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||||||| | |||| || |||||||| ||||| | |||||||||||| ||||    ||| |||| |||||| ||||||||  |    
T  14617040 aaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacagcctcttgtgtaaataaca----aggtaaggttgcgtacaatacacc--a 14617133  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    |||||||||| ||||||||||||||||| |||| ||||||||| |||||||| | | ||||||||    
T  14617134 aatggtgggatcccttcccggaccctgcatatgcgggagctttagtgcaccgggttaccctttta 14617198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 6925102 - 6925259
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||||||||||| || | ||||||| |||||||| ||||  | ||||||||||||||     ||||| ||||||||| | |||||||| ||    
T  6925102 aaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaa----tagggtaaggctgcggacaatacaccgaa 6925197  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
      ||||||||||||||||||| ||||||||||| ||||||||| |||||||||| |||| ||||    
T  6925198 --tggtgggaccccttcccggtccctgcgtatgcgggagctttagtgcaccgagttgccttttt 6925259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 18724701 - 18724549
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||||||| | ||||||| |||||||| ||||| | |||||||||| ||||||||||    ||||||| ||| ||||||||  |    
T  18724701 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggt----aaggctgtgtacaatacacc--a 18724608  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 159  Q
    |||  ||||||||||||||||||||| | |||| ||||||||| ||||||| ||||||||    
T  18724607 aatcttgggaccccttcccggaccctacatatgcgggagcttt-gtgcaccaagctgccc 18724549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 19414441 - 19414597
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||| ||||||||| | ||||||| |||||||||||||  | ||||| ||||||| |||| ||    |||||||||| |||||||||||     
T  19414441 aaagttgttgtcatatgactgaaaggtcacgggttcaagtcctagaaagagcctcttatgtaaaa-caggtta----aggctgcgtacaatacaccaaa- 19414534  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
     |||||||||||||||||| ||||||| |||| ||||||| | |||||||| | ||||||||||    
T  19414535 -tggtgggaccccttcccgtaccctgcatatgcgggagctctagtgcaccgggttgccctttta 19414597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 18742117 - 18741968
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctag-aaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacacca 97  Q
    |||||||||||||||||||||||| | || |||| ||| || | | |||| |||| |||| ||||||  |||||||    |||||||||| |||||||||    
T  18742117 aaagttgttgtcatgtgactgaaaggtcaagggttcaaatcttgggaaacagtcttttgtataaaaaaacagggta----aggctgcgtacaatacacca 18742022  T
Q  98 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    ||||||||||||||||||||| ||||||||||||| | ||||||| ||||||||    
T  18742021 aaaatggtgggaccccttcccagaccctgcgtatgcgagagctttagtgcaccg 18741968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 9939463 - 9939624
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaa-aaacagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||||||| | |||| || |||||||| |||||   ||||||| ||| ||||| ||||    ||| |||||  |||||||||||    
T  9939463 aaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacaacctcttgtttaagaaacatggta----aggttgcgtgcaatacaccaaa 9939558  T
Q  100 aatggtgggacccc-ttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    |||||||||||||| ||| ||||||||||||||| ||||||||| |||||||| | | ||||||||    
T  9939559 aatggtgggacccccttctcggaccctgcgtatgcgggagctttagtgcaccgggttaccctttta 9939624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 23768476 - 23768334
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||||||||||| || | ||| ||| |||||| | ||||| | |||||||||||||| |||||||    |||||||||| |||||||||||    
T  23768476 aaagttgttgtcatgtgactgtaaggtcacaggttcaagtcatggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaaa 23768381  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgca 148  Q
      ||||||||| ||||||| ||||||||||||| ||||||||| |||||    
T  23768380 --tggtgggacaccttcccagaccctgcgtatgcgggagctttagtgca 23768334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 77 - 162
Target Start/End: Original strand, 4349713 - 4349796
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
    ||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  4349713 aaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 4349796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 13 - 151
Target Start/End: Complemental strand, 35253329 - 35253198
Alignment:
Q  13 atgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccc 112  Q
    ||||||||||||   ||||||| |||||||| ||||| | ||||||||||||| |||||||    |||||||||| |||||||||||  |||||||||||    
T  35253329 atgtgactgaaagatcacgggttcaagtcctcgaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa--tggtgggaccc 35253237  T
Q  113 cttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    ||||||||||||||| |||| ||||||| | ||||||||    
T  35253236 cttcccggaccctgcatatgcgggagctctagtgcaccg 35253198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 41319962 - 41319802
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||||||| | ||| |||  ||||||| ||||| |||||||||||| ||||||||||    ||||||||||| ||||||||  |    
T  41319962 aaagttgttgtcatgtgactgaaaggtcacaggtttaagtcctggaaacagtctcttgtgtaaaaaacagggt----aaggctgcgtacaatacacc--a 41319869  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttttagg 166  Q
    |||| ||||||||||||||| ||||| | |||| ||||| ||  |||||| | | ||||||||||||    
T  41319868 aatgatgggaccccttcccgaacccttcatatgcgggagtttcagtgcactgggttgcccttttagg 41319802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 42304292 - 42304218
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    |||| |||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  42304292 aaggttgcgtacaatacacaaaaaatggtgggaccccttcccggaccctgcgtatgtgggagctttagtgcaccg 42304218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 50606488 - 50606562
Alignment:
Q  89 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||| | |||||||||    
T  50606488 aatacaccaaaaatggtgggaccccttcccggaccctgcatatgcgggagctttagtgcaccgggttgccctttt 50606562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 45402097 - 45402243
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaagg-ctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||| || || |  |||||| |||||||| ||||| | ||||||||||||||||||||    |||  ||||||| |||||||||||    
T  45402097 aaagttgttgtcatgtga-tggaaggtaacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggttc--aagttctgcgtacaatacaccaaa 45402193  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
      ||||||||||||||||| ||||||||||||| ||||||||| ||||||||    
T  45402194 --tggtgggaccccttcccagaccctgcgtatgcgggagctttagtgcaccg 45402243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 6983965 - 6983809
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    ||||||||||||| |||||||||| | ||| ||| |||||||| ||||| | ||| | |  |||||||||||| | |    |||||| |||||||||||     
T  6983965 aaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacagcctcgtata-aaaaacagggtaagta----tgcgtacaatacaccaaa- 6983872  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
     |||||||||||||| |||||||||||||| |  ||||||||||||||||| ||||||||||||    
T  6983871 -tggtgggacccctttccggaccctgcgtaggcaggagctttggtgcaccgggctgccctttta 6983809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 19932838 - 19932783
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatg 132  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19932838 aaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgtatg 19932783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 2435943 - 2435797
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||| |||||||||| | ||||||| |||||||| ||||| | ||| ||||| ||||| ||||||    || ||||||| |||||||||||    
T  2435943 aaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtgaaaaatagggta----agcctgcgtacaatacaccaaa 2435848  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    | |||||||||||||| ||| ||||| || ||| ||||||||| ||||||||    
T  2435847 a-tggtgggacccctttccgtaccctccgcatgcgggagctttagtgcaccg 2435797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 45812691 - 45812548
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| | ||| ||| ||||||||  |||| |||||||||||||||  ||||||    ||||||| || |||||||||||     
T  45812691 aaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacagtctcttgtgtaaaag-agggta----aggctgcatacaatacaccaaa- 45812598  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
     |||||||||||||||||  ||||||| |||| ||||||| | ||||||||    
T  45812597 -tggtgggaccccttcccaaaccctgcatatgcgggagctctagtgcaccg 45812548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 19701572 - 19701730
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||| ||||||||||| | |||||||  ||||| |  |||| | ||||||||||||||     | || |||| || ||| ||||||||||||    
T  19701572 aaagttgttgtcgtgtgactgaaatgtcacgggtttaagtcatgaaaacagcctcttgtgtaaaaaac---ttggtaaggatgggtacaatacaccaaaa 19701668  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
     ||||||| ||||||||||||||||||||||| ||||||||| |||||||  ||| |||||||    
T  19701669 -tggtggggccccttcccggaccctgcgtatgcgggagctttagtgcaccaggctaccctttt 19701730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 160
Target Start/End: Original strand, 22324925 - 22325049
Alignment:
Q  31 gggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgta 130  Q
    |||| |||||| | ||||| | |||||||||||||||||||||    ||||||| || |||||||||||||||||||  |||| ||||| ||||||||||    
T  22324925 gggttcaagtcttggaaacagcctcttgtgtaaaaacagggta----aggctgcatacaatacaccaaaaatggtggagccccgtcccg-accctgcgta 22325019  T
Q  131 tgagggagctttggtgcaccgagctgccct 160  Q
    || ||||||||| |||||||  ||||||||    
T  22325020 tgcgggagctttagtgcaccaggctgccct 22325049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 163
Target Start/End: Original strand, 8197046 - 8197202
Alignment:
Q  2 aagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    ||||||||||||||||||||||| | ||||||| |||||||| | ||  | ||||||||| ||||||| |||    |||||| |||| | ||||||  ||    
T  8197046 aagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggtaattgcctcttgtgtaaaaaacatggt----aaggctacgtacagtacacc--aa 8197139  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||| |||||||||| |||||||||||||||  |||||||| ||| |||| | |||||||||    
T  8197140 atggtaggaccccttctcggaccctgcgtatgttggagctttagtgtaccgggttgccctttt 8197202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 12126991 - 12126836
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||| | ||||| | |||||||  |||| || ||||| |  |||||||||||| |||||||    |||||||||| |||||||||||     
T  12126991 aaagttgttgtcatgtaattgaaaggtcacgggtttaagttctggaaacagcttcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa- 12126898  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
     | |||||||||||||||||||||||| |||| ||||||| | |||||| | | |||||||||    
T  12126897 -ttgtgggaccccttcccggaccctgcatatgcgggagctgtagtgcactgcgttgccctttt 12126836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 31442473 - 31442400
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    |||| |||||| |||||||||||| ||||||||||||||||||||| ||| ||||| ||||||||||||||||||    
T  31442473 aaggatgcgtacaatacaccaaaa-tggtgggaccccttcccggacactgtgtatgtgggagctttggtgcaccg 31442400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 17470502 - 17470361
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||| |||||||||  | || |||| |||||||||||||| | |||||||||| ||||||||||    ||||||||||| |||||||| ||    
T  17470502 aaagttgttgtcacgtgactgaatggtcatgggttcaagtcctagaaacagcctcttgtgtaaaaaacagggt----aaggctgcgtacaatacacc-aa 17470408  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgca 148  Q
    ||| ||||||||| |||| |   |||||||||| ||||||||| |||||    
T  17470407 aatagtgggacccgttcctg--acctgcgtatgtgggagctttagtgca 17470361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 20036222 - 20036379
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| | ||||||| |||||||| |||||   |||||||||||| | |  |  || |||  |||||  ||||||||  ||    
T  20036222 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaaactcttgtgtaaagagaaag--ggtaagattgcgttcaatacacc--aa 20036317  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||| ||||||||||||||||||||||||  |||| ||| |||||||| ||||| |||||    
T  20036318 atggtggaaccccttcccggaccctgcgtatgcaggag-ttttgtgcaccgggctgctctttt 20036379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 25468419 - 25468285
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||| ||||| | || |||| |||||||| |||||   |||||||||||||| ||||||    |||| |||||| ||||||||  |    
T  25468419 aaagttgttgtcatgtgattgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaatcagggt----aaggttgcgtacaatacacc--a 25468326  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagct 140  Q
    |||||| ||||| |||||| ||||||||||||| |||||||    
T  25468325 aatggttggacctcttcccagaccctgcgtatgcgggagct 25468285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 77 - 159
Target Start/End: Complemental strand, 10378818 - 10378738
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 159  Q
    ||||||||||| |||||||||||  |||||||||||||||  ||||||||| |||| ||||||||| |||||||| |||||||    
T  10378818 aaggctgcgtacaatacaccaaa--tggtgggaccccttcttggaccctgcatatgcgggagctttagtgcaccgggctgccc 10378738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 81 - 163
Target Start/End: Original strand, 15505643 - 15505722
Alignment:
Q  81 ctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||| |||||||||||  |||||||||||||||||| |||||||||||| ||||||||| ||||||||| ||||| ||||    
T  15505643 ctgcgtacaatacaccaaa--tggtgggaccccttcccgaaccctgcgtatgcgggagcttt-gtgcaccgaactgccttttt 15505722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 40 - 163
Target Start/End: Complemental strand, 31382330 - 31382213
Alignment:
Q  40 tcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagc 139  Q
    |||| ||||| | |||||||||||||||||| ||    |||||||||| |||||||||||  |||||||||||||||| ||||||||| |||| ||||||    
T  31382330 tcctggaaacagcctcttgtgtaaaaacaggata----aggctgcgtacaatacaccaaa--tggtgggaccccttcctggaccctgcatatgcgggagc 31382237  T
Q  140 tttggtgcaccgagctgccctttt 163  Q
    |||  || |||| | |||||||||    
T  31382236 tttactgtaccgggttgccctttt 31382213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 160
Target Start/End: Complemental strand, 15511271 - 15511150
Alignment:
Q  37 aagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcg--taaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatga 133  Q
    ||||||| ||||| | |||||||||||||| |||||||    ||||||||  || |||||||||||| |||||| ||||||||| ||||||||||||||     
T  15511271 aagtcctggaaaccgcctcttgtgtaaaaaacagggta----aggctgcggatacaatacaccaaaa-tggtggtaccccttcctggaccctgcgtatgt 15511177  T
Q  134 gggagctttggtgcaccgagctgccct 160  Q
    | ||||||| |||||||| ||||||||    
T  15511176 gtgagctttagtgcaccgggctgccct 15511150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 22930223 - 22930104
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| | || |||| |||||||| ||||| | || |||||||||||||||||    |||| || | | ||||||||  ||    
T  22930223 aaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagccttttgtgtaaaaacagggt----aaggttgtg-acaatacacc--aa 22930131  T
Q  101 atggtgggaccccttcccggaccctgc 127  Q
    ||||||||||||||||| |||||||||    
T  22930130 atggtgggaccccttcctggaccctgc 22930104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 20999933 - 20999848
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    ||||||||||| |||||||||||  || |||| |||||||| | |||||||||| | ||||||||| |||||||| ||||||||||||    
T  20999933 aaggctgcgtacaatacaccaaa--tgatggggccccttccggcaccctgcgtacgcgggagctttagtgcaccgggctgccctttta 20999848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 25290165 - 25290300
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaa--acggtctcttgtgt-aaaaacagggt-agggaaggctgcgtaaaatacacc 96  Q
    |||||||||||||||||||||||| | |||| || |||||| | |||  || | ||||||||| ||||||||||| ||| |||| || ||| ||||||||    
T  25290165 aaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcttggaaacacagcctcttgtgtaaaaaacagggtaaggcaaggttgtgtacaatacacc 25290264  T
Q  97 aaaaatggtgggaccccttcccggaccctgcgtatg 132  Q
    ||||||| | |||||||||||| ||| |||| ||||    
T  25290265 aaaaatgataggaccccttcccagactctgcatatg 25290300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 30555210 - 30555274
Alignment:
Q  99 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||||||||||||||||| ||||||||||||||| | ||||||| |||||||| |||| ||||||    
T  30555210 aaatggtgggaccccttcacggaccctgcgtatgcgagagctttagtgcaccgggctgacctttt 30555274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 50811941 - 50812099
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacaccaa 98  Q
    ||||||||||||| |||||||||| | |||||   || ||||| ||||| |  |||||||||||||  |||||||    ||| |||||| ||||||||||    
T  50811941 aaagttgttgtcacgtgactgaaaggtcacggaatcatgtcctggaaacagcttcttgtgtaaaaaaacagggta----aggttgcgtacaatacaccaa 50812036  T
Q  99 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    || |||||| |||||||||||  ||||||||||| |||||||||  ||||| | |||||||||||    
T  50812037 aa-tggtgg-accccttcccgcgccctgcgtatgcgggagctttaatgcactgggctgccctttt 50812099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 77 - 163
Target Start/End: Complemental strand, 1517394 - 1517310
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||||| ||||||||||   ||||||||||||||| | |||||||||||||  |||||||| |||||||| | |||||||||    
T  1517394 aaggctgcgtacaatacaccaat--tggtgggaccccttctcagaccctgcgtatgcaggagctttagtgcaccgggttgccctttt 1517310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 77 - 163
Target Start/End: Original strand, 23796540 - 23796624
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||| |||||| |||||||||||  ||||| ||||||||||| |||||||| ||||  |||||||| |||||||| |||||||||||    
T  23796540 aaggttgcgtacaatacaccaaa--tggtgagaccccttcccagaccctgcatatgctggagctttagtgcaccgggctgccctttt 23796624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 33222986 - 33223093
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| | ||||| |  ||||| | ||||| | |||||||||||||||||    || |||| |||||| |||||||| |||    
T  33222986 aaagttgttgtcatgtgactgaaaggtcacggatttaagtcatggaaacagcctcttgtgtaaaaacag----ggaaaggttgcgtacaatacacc-aaa 33223080  T
Q  101 atggtgggacccc 113  Q
    |||||||||||||    
T  33223081 atggtgggacccc 33223093  T

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Target: chr1; HSP #53
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 77 - 163
Target Start/End: Original strand, 43768214 - 43768298
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||||||| || ||||||||||   ||||||||||||||||| ||||||||||||  |||||||||  ||||||| |||||||||||    
T  43768214 aaggctgcctacaatacaccaat--tggtgggaccccttcccagaccctgcgtatacgggagctttaatgcaccgggctgccctttt 43768298  T

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Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 44485265 - 44485128
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||| ||||| | |||||||   |||||| |||||   | ||||||||||| ||| ||||    |||||||||| |||||||||||    
T  44485265 aaagttgttgtcatgtgattgaaaggtcacgggttatagtcctggaaacaaccacttgtgtaaaagacatggta----aggctgcgtacaatacaccaaa 44485170  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttg 143  Q
      |||| ||||||||||||||| ||| |||||| ||||||||||    
T  44485169 --tggttggaccccttcccggatcctacgtatgcgggagctttg 44485128  T

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Target: chr1; HSP #55
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 33594191 - 33594129
Alignment:
Q  102 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    ||||||||||||||||| ||||||||||||| ||||||||| |||||| | ||| ||||||||    
T  33594191 tggtgggaccccttcccagaccctgcgtatgcgggagctttagtgcactgggctaccctttta 33594129  T

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Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 22327101 - 22327255
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||||||| | | ||||| |||||||| |||||   ||||||||| |||||||||||    ||||||| |||  || |||| ||    
T  22327101 aaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggt----aaggctgtgtacgatgcacc-aa 22327195  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||||||||     |||||| || ||| ||||| |||||||||||||||||| |||||| ||||    
T  22327196 aatggtggg----gttcccgaactctgtgtatgcgggagctttggtgcaccgggctgccttttt 22327255  T

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Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 151
Target Start/End: Complemental strand, 4587626 - 4587574
Alignment:
Q  99 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    ||||||||||||||||||||||||||||| |||| ||||||||  ||||||||    
T  4587626 aaatggtgggaccccttcccggaccctgcctatgcgggagcttcagtgcaccg 4587574  T

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Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 30682907 - 30682951
Alignment:
Q  99 aaatggtgggaccccttcccggaccctgcgtatgagggagctttg 143  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||    
T  30682907 aaatggtgggaccccttcccggaccgtgcgtatgcgggagctttg 30682951  T

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Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 19974158 - 19974072
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    |||| |||||| |||||||||||| || |||||||| ||||||||| ||  ||||| ||||||||| |||||| | ||||||||||||    
T  19974158 aaggttgcgtacaatacaccaaaa-tgatgggacccattcccggactctatgtatgcgggagctttagtgcacggggctgccctttta 19974072  T

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Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 159
Target Start/End: Complemental strand, 39215042 - 39214961
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 159  Q
    ||||||||||| ||||  |||||| ||||||| |||||||||  |||||||||||| || |||||| |||||||| |||||||    
T  39215042 aaggctgcgtacaatattccaaaa-tggtgggtccccttcccaaaccctgcgtatgtggaagctttagtgcaccgggctgccc 39214961  T

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Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 45264471 - 45264411
Alignment:
Q  89 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 150  Q
    |||||||||||| ||||||||||||||| | |||||||| |||| ||||||||| |||||||    
T  45264471 aatacaccaaaa-tggtgggaccccttctcagaccctgcatatgcgggagctttagtgcacc 45264411  T

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Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 132
Target Start/End: Original strand, 6358199 - 6358250
Alignment:
Q  80 gctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatg 132  Q
    |||||||| || ||||||||| ||||||||||||||||| |||||||||||||    
T  6358199 gctgcgtacaaaacaccaaaa-tggtgggaccccttcccagaccctgcgtatg 6358250  T

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Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 163
Target Start/End: Original strand, 35019305 - 35019388
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||||||| || ||||||||||   ||||||||||||| ||| ||||||||||||| | ||||||| |||||||| |||||| ||||    
T  35019305 aaggctgcatacaatacaccaat--tggtgggacccct-cccagaccctgcgtatgcgagagctttagtgcaccgggctgccatttt 35019388  T

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Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 25554796 - 25554742
Alignment:
Q  108 gaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
    |||||||||||| |||||||||||| |||||| || ||||||||  |||||||||    
T  25554796 gaccccttcccgaaccctgcgtatgcgggagcattagtgcaccggactgcccttt 25554742  T

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Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 40424744 - 40424786
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcct 43  Q
    |||||||||||||||||||||||| | ||||||| ||||||||    
T  40424744 aaagttgttgtcatgtgactgaaaggccacgggttcaagtcct 40424786  T

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Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 2436049 - 2435984
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 66  Q
    ||||||||||||| |||||||||| | ||||||| |||||||| |||||   ||| ||||||||||    
T  2436049 aaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctcctgtgtaaaaa 2435984  T

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Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 50760382 - 50760288
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgtaaaatacaccaa 98  Q
    ||||| |||||||||||||||| | | ||||||| ||||||||  |||| | |||||||||| ||||| ||||    ||||||||||| ||||||||||    
T  50760382 aaagtagttgtcatgtgactgagaggtcacgggttcaagtcctgaaaacagcctcttgtgtataaaactgggt----aaggctgcgtataatacaccaa 50760288  T

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Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 132
Target Start/End: Complemental strand, 3060031 - 3060003
Alignment:
Q  104 gtgggaccccttcccggaccctgcgtatg 132  Q
    |||||||||||||||||||||||||||||    
T  3060031 gtgggaccccttcccggaccctgcgtatg 3060003  T

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Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 16120819 - 16120875
Alignment:
Q  107 ggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||||||||||||| |||||| |||| |||||||||  ||||||  |||||||||||    
T  16120819 ggaccccttcccggcccctgcatatgcgggagctttaatgcaccaggctgccctttt 16120875  T

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Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 163
Target Start/End: Complemental strand, 50760287 - 50760239
Alignment:
Q  115 tcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||| |||||||||||| |||||||||  ||||||| |||||||||||    
T  50760287 tcccgaaccctgcgtatgcgggagctttaatgcaccgggctgccctttt 50760239  T

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Target: chr4 (Bit Score: 79; Significance: 4e-37; HSPs: 79)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 5648238 - 5648394
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    ||||||||||||||||||||| || | ||||||| |||||||| ||||| | ||||||||||||||||||||    ||||||||||| ||||||||  ||    
T  5648238 aaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggt----aaggctgcgtacaatacacc--aa 5648331  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||||||||||||||||||||||||||||||| ||||||||  |||||| | | |||||||||    
T  5648332 atggtgggaccccttcccggaccctgcgtatgcgggagcttcagtgcactgggttgccctttt 5648394  T

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Target: chr4; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 6430781 - 6430627
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| | ||||||| |||||| | ||||| | ||||||||||||||||||||    ||||||||||| ||||||||  ||    
T  6430781 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcatggaaacagcctcttgtgtaaaaacagggt----aaggctgcgtacaatacacc--aa 6430688  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 161  Q
    ||||||||||| |||||||||||||||||||| ||||||||| | |||||| | |||||||    
T  6430687 atggtgggaccacttcccggaccctgcgtatgcgggagctttagcgcaccgggttgccctt 6430627  T

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Target: chr4; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 16911541 - 16911701
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||| ||| | ||||||| |||||||||||||| | |||||||||| ||| |||||||    |||||||||| ||||||||||     
T  16911541 aaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctagaaacagcctcttgtgtacaaatcagggta----aggctgcgtacaatacaccaat 16911636  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    ||||||||||||||||||||||||||||||| | ||||||||| ||  |||| | ||||||||||    
T  16911637 aatggtgggaccccttcccggaccctgcgtacgcgggagctttagtttaccgggttgccctttta 16911701  T

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Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 163
Target Start/End: Original strand, 54175043 - 54175201
Alignment:
Q  2 aagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaa-cggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    ||||||||||||||||||||||| | ||||| | |||||||| |||| | | |||||||||||||||||||||    |||||||||| ||||||||||||    
T  54175043 aagttgttgtcatgtgactgaaatgtcacggattcaagtcctggaaaacagcctcttgtgtaaaaacagggta----aggctgcgtacaatacaccaaaa 54175138  T
Q  101 atggtgggaccccttccc-ggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
     ||||||||||||||||| ||||||||| |||| ||||||||| |||||||| |||||||||||    
T  54175139 -tggtgggaccccttccccggaccctgcatatgcgggagctttagtgcaccgggctgccctttt 54175201  T

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Target: chr4; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 44363288 - 44363130
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||||||| | |||| || ||||||||  |||| | ||| |||||||||| ||||||||||    ||||||| ||  |||||||    
T  44363288 aaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctgaaaacagcctcgtgtgtaaaaaacagggtaggg----ctgcgtacaacgcaccaaa 44363193  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  44363192 aatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 44363130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 16408759 - 16408600
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||||||||||| || | ||||||| |||||||| ||||| | |||||||||||||| |||||||    || ||||||| ||||||||||     
T  16408759 aaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----agactgcgtacaatacaccaat 16408664  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||||||| |||||||||||||||| || |||| ||||||||| |||||||| | |||||||||    
T  16408663 aatggtggaaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgccctttt 16408600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 30639359 - 30639515
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||| ||||||||||| | ||| ||| |||||||| ||||| | ||||||||||||||||||||    ||||||||||| ||||||||  ||    
T  30639359 aaagttgttgtcttgtgactgaaaggtcactggttcaagtcctggaaacagactcttgtgtaaaaacagggt----aaggctgcgtacaatacacc--aa 30639452  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||||| |||||||||||||||||||| |||| ||||||||| |||||| | | |||||||||    
T  30639453 atggtgagaccccttcccggaccctgcatatgcgggagctttagtgcactgggttgccctttt 30639515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 54730228 - 54730377
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||  ||| | ||||||| |||||||||||||| | |||||||||||||| |   ||||  ||||||||||| ||||||||||     
T  54730228 aaagttgttgtcatgtgaccaaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaaaa---taggataaggctgcgtataatacaccaat 54730324  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccga 152  Q
    |||| ||| |||||||||||||||||||||||| ||||||||| |||||||||    
T  54730325 aatgatggaaccccttcccggaccctgcgtatgcgggagctttagtgcaccga 54730377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 30352747 - 30352579
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa------cagggtagggaaggctgcgtaaaataca 94  Q
    ||||||||||||| ||||| |||| | |||||||   |||||| ||||| | ||||||||||||||      ||||||| | || |||||||| ||||||    
T  30352747 aaagttgttgtcaagtgaccgaaaggtcacgggttagagtcctggaaacagcctcttgtgtaaaaaaaaaaacagggtaagtaaagctgcgtacaataca 30352648  T
Q  95 ccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||| | |||||||||    
T  30352647 ccaaaaatggtgggaccccttctcggaccctgcgtatgcgggagctttagtgcaccgtgttgccctttt 30352579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 40915808 - 40915952
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    ||||||||||||||||||||  || | ||||||| |||||||| ||||| | ||||||||||||||||    ||| ||||||||||| ||||||||  ||    
T  40915808 aaagttgttgtcatgtgactataaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaca----aggtaaggctgcgtacaatacacc--aa 40915901  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    ||||||||| |||||||||||||||||||||| ||||||||  ||||||||    
T  40915902 atggtgggagcccttcccggaccctgcgtatgcgggagcttcagtgcaccg 40915952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 47528684 - 47528529
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| | ||| ||| |||||||| ||||| | ||||||||||||| |||||||    |||||||||| |||||||||||     
T  47528684 aaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa- 47528591  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
     |||||||||||||||||||||||||  |||| ||||||| | |||||||| | |||||||||    
T  47528590 -tggtgggaccccttcccggaccctgaatatgtgggagctctagtgcaccgggttgccctttt 47528529  T

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Target: chr4; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 48598979 - 48598824
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||| ||||||||||    ||||||||||| ||||||||  ||    
T  48598979 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacagggt----aaggctgcgtacaatacacc--aa 48598887  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||||||||||||||||| ||| ||||  |||||| | |||||||| | |||||||||    
T  48598886 atggtgggaccccttcccggaccatgcatatgccggagctctagtgcaccgggttgccctttt 48598824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 20224963 - 20225117
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| | || |||| |||||||| |||||   ||||||||||||| |||||||    |||||||||| |||||||||||     
T  20224963 aaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa- 20225056  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
     |||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||    
T  20225057 -tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 20225117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 5306819 - 5306694
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    ||||||| |||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||||| ||||||    |||| |||||| ||||||||  ||    
T  5306819 aaagttgatgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaatcagggt----aaggttgcgtacaatacacc--aa 5306726  T
Q  101 atggtgggaccccttcccggaccctgcgtatg 132  Q
    ||||||||||||||||||||||||||||||||    
T  5306725 atggtgggaccccttcccggaccctgcgtatg 5306694  T

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Target: chr4; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 23501772 - 23501925
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||||||| | ||||||| ||||||      || | |||||||||||||| |||||||    ||| |||||| ||||||||||     
T  23501772 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtc------acagcctcttgtgtaaaaaacagggta----aggttgcgtacaatacaccaat 23501861  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||||||||||||||||||||||||||| |||| ||||||||| |||||||| | |||||||||    
T  23501862 aatggtgggaccccttcccggaccctgcatatgcgggagctttagtgcaccgggttgccctttt 23501925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 11054302 - 11054147
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| | ||||||| ||||||||  |||| ||||||||||| ||||||||||    ||| ||||||| ||||||||  ||    
T  11054302 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctgaaaacagtctcttgtgt-aaaacagggt----aagactgcgtacaatacacc--aa 11054210  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||| || ||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  11054209 atggcggaaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 11054147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 94 - 164
Target Start/End: Complemental strand, 47482918 - 47482848
Alignment:
Q  94 accaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  47482918 accaaaaatggtgggaccccttcccggaccctgcgtatgcgggagctttggtgcaacgagctgccctttta 47482848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 39 - 163
Target Start/End: Complemental strand, 20639777 - 20639657
Alignment:
Q  39 gtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgaggga 137  Q
    ||||| ||||| | |||||||||||||| |||||||    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  20639777 gtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaaaa-tggtgggaccccttcccggaccctgcgtatgcggga 20639683  T
Q  138 gctttggtgcaccgagctgccctttt 163  Q
    ||||| |||||||| | |||||||||    
T  20639682 gctttagtgcaccgggttgccctttt 20639657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 21646943 - 21647090
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||||||||||| || | ||| ||| |||||||| ||||| | ||||||||||||||     ||||| ||||||||||| |||| |||||     
T  21646943 aaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaaa----tagggtaaggctgcgtacaatataccaat 21647038  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    ||||||||||||||||||| ||||| || |||| ||||||||| ||||||||    
T  21647039 aatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 21647090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 35567149 - 35567306
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||| ||||||| | || |||| |||||| | ||||| | | |||||||||||| |||||||    |||||| ||| || ||||||||    
T  35567149 aaagttgttgtcatgtaactgaaaggtcatgggttcaagtcttggaaacagccacttgtgtaaaaaacagggta----aggctgtgtacaacacaccaaa 35567244  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
      |||||||||||||||||| ||||||||| || ||||||||| |||||||| |||||||||||    
T  35567245 --tggtgggaccccttcccgaaccctgcgtctgcgggagctttagtgcaccgggctgccctttt 35567306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 14 - 160
Target Start/End: Complemental strand, 29208039 - 29207900
Alignment:
Q  14 tgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggacccc 113  Q
    ||||||||||| | ||||||| |||||||| ||||  | ||||||||||||| |||||||    |||||||||| |||||||||||  ||||||||||||    
T  29208039 tgtgactgaaaggtcacgggttcaagtcctggaaattgcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa--tggtgggacccc 29207947  T
Q  114 ttcccggaccctgcgtatgagggagctttggtgcaccgagctgccct 160  Q
    |||||||||||||| |||| ||||||| | |||||||| | ||||||    
T  29207946 ttcccggaccctgcatatgcgggagctctagtgcaccgggttgccct 29207900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 17043549 - 17043414
Alignment:
Q  2 aagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||| |||||||||| | ||| ||| |||||||| ||||| | ||||||||||||| |||||||    ||||||||||| ||||||||  ||    
T  17043549 aagttgttgtcaagtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaatacagggt----aaggctgcgtacaatacacc--aa 17043456  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagcttt 142  Q
    |||||||||||||||||| |||||||| ||||  ||||||||    
T  17043455 atggtgggaccccttcccagaccctgcatatgctggagcttt 17043414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 77 - 162
Target Start/End: Original strand, 20225126 - 20225211
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||| || |||| ||||||||| |||||||| | ||||||||    
T  20225126 aaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgcccttt 20225211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 163
Target Start/End: Complemental strand, 9832463 - 9832312
Alignment:
Q  5 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatgg 104  Q
    ||||||| || ||||||||| | ||||||| ||||||||  |||| | ||||||||||||| |||||||    |||||||||| |||||||||||  |||    
T  9832463 ttgttgtgatctgactgaaaggtcacgggttcaagtcctgaaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa--tgg 9832371  T
Q  105 tgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||||||||||||||||| ||||  ||| || | |||||||| | |||||||||    
T  9832370 tgggaccccttcccggaccctgcatatgcaggaactctagtgcaccgggttgccctttt 9832312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 77 - 163
Target Start/End: Complemental strand, 20908720 - 20908635
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||||| |||||||||||| |||||||||||||||||| |||||||||||| ||||||||| ||||||   |||||||||||    
T  20908720 aaggctgcgtacaatacaccaaaa-tggtgggaccccttcccgaaccctgcgtatgcgggagctttagtgcacaaggctgccctttt 20908635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 23580364 - 23580207
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||| |||||||||| | ||||||| ||||| |||||||  | |||||||||| |||||||    |||||| |||||||  ||||||| ||    
T  23580364 aaagttgttgtcacgtgactgaaaggtcacgggttcaagttctagaaagagcctcttgtgtaaaaaacag----gggaagactgcgtaggatacacc-aa 23580270  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||| | |||||||||  ||| |||| ||||| ||||||||| ||||||||||||||||||||    
T  23580269 aatggcgagaccccttcttgga-cctgtgtatgtgggagctttagtgcaccgagctgccctttt 23580207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 33836560 - 33836486
Alignment:
Q  89 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||| || | |||||||||    
T  33836560 aatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaacgggttgccctttt 33836486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 151
Target Start/End: Original strand, 19027829 - 19027972
Alignment:
Q  3 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 101  Q
    ||||||||||| |||||||||| | ||||||| |||||||| |||||    ||||||||||||| |||||||    |||||||||| ||||||||||       
T  19027829 agttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacatcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaat-- 19027922  T
Q  102 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    |||||||||||||| || ||| ||||||||| ||||||||| ||||||||    
T  19027923 tggtgggacccctttccagactctgcgtatgtgggagctttagtgcaccg 19027972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 30690339 - 30690176
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaac---agggtaggg-aaggctgcgtaaaatacacc 96  Q
    ||||| ||||||| |||||||||| | ||||||| |||||||| ||||  | ||||||||||||||    |    |||| |||||||| || ||||||||    
T  30690339 aaagtggttgtcaagtgactgaaaggtcacgggttcaagtcctggaaaaagcctcttgtgtaaaaaataaaaaacagggtaaggctgcatacaatacacc 30690240  T
Q  97 aaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
    ||   ||||||||||||||||||||||||||||||| ||||||||| |||||||  ||||||||||    
T  30690239 aat--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccaggctgcccttt 30690176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 51865121 - 51865036
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    ||||||||||| |||||||||||  ||||||| ||||||||||||||||||||||| |||||||||  |||||||  |||||||||||    
T  51865121 aaggctgcgtacaatacaccaaa--tggtggggccccttcccggaccctgcgtatgcgggagctttattgcaccggactgccctttta 51865036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 47441686 - 47441541
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||| |||||||||| | ||| ||| ||||||| |||||| ||||||| |||||||| ||||||    ||||||| ||| ||||||||  |    
T  47441686 aaagttgttgtcacgtgactgaaaggtcacaggttcaagtccaagaaacagtctcttttgtaaaaatcagggt----aaggctgtgtacaatacacc--a 47441593  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    |||||| |||||||||||||||||||| ||| |  |||||||| || |||||    
T  47441592 aatggttggaccccttcccggaccctgagtaagcaggagctttcgtccaccg 47441541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 40 - 161
Target Start/End: Complemental strand, 7909397 - 7909281
Alignment:
Q  40 tcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatg-agggag 138  Q
    |||| ||||| |||||||||||||||||||||||    ||| |||||| |||||||||||  |||||||||||||||||| ||||||||||||  |||||    
T  7909397 tcctggaaacagtctcttgtgtaaaaacagggta----aggttgcgtacaatacaccaaa--tggtgggaccccttcccgaaccctgcgtatgcggggag 7909304  T
Q  139 ctttggtgcaccgagctgccctt 161  Q
    |||| ||||| || | |||||||    
T  7909303 ctttagtgcatcgggttgccctt 7909281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 25343166 - 25343321
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||| |||||||| | | ||| ||| ||||| || ||||  |||||||||||||||| |||||||    |||||||||| |||||||||||    
T  25343166 aaagttgttgtcacgtgactgataggtcacaggttcaagttctggaaatagtctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaaa 25343261  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 159  Q
    || ||| |||||||||||  || |||||||||| | ||||||| | |||||  |||||||    
T  25343262 aagggttggaccccttcctagatcctgcgtatgtgagagctttagagcacccggctgccc 25343321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 143
Target Start/End: Original strand, 25463108 - 25463238
Alignment:
Q  8 ttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgg 107  Q
    ||||||||||||||||| | ||||||| |||||||| |||||   ||||||||||||||   || |   |||| |||||| || ||||||||  ||||||    
T  25463108 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaactggga---aaggttgcgtacaacacaccaaa--tggtgg 25463202  T
Q  108 gaccccttcccggaccctgcgtatgagggagctttg 143  Q
    |||||||||||||||||||| |||| ||||||||||    
T  25463203 gaccccttcccggaccctgcatatgcgggagctttg 25463238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 100 - 162
Target Start/End: Complemental strand, 38755970 - 38755908
Alignment:
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  38755970 aatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 38755908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 13256553 - 13256398
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||||||||||| || | ||  ||| |||||||| ||    | |||||||||||||| |||||||    |||||||||| ||||||||||     
T  13256553 aaagttgttgtcatgtgactggaaggtcataggttcaagtcctgga----gcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaat 13256462  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||| |||||||||||||||| |||| || | || ||||||||| |||||||| | |||||||||    
T  13256461 aatagtgggaccccttcccgaaccccgcatctgcgggagctttagtgcaccgggttgccctttt 13256398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 28 - 163
Target Start/End: Original strand, 47443963 - 47444093
Alignment:
Q  28 cacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctg 126  Q
    ||||||| |||||||| ||||| | |||||| ||||||| |||||||    |||||||||| |||||||||||  |||||||||||||||||||||||||    
T  47443963 cacgggttcaagtcctggaaacagcctcttgcgtaaaaaacagggta----aggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctg 47444056  T
Q  127 cgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    | ||||  |||||||  |||||| | | |||||||||    
T  47444057 catatgcaggagcttcagtgcactgggttgccctttt 47444093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 11394924 - 11394987
Alignment:
Q  99 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
    ||||||||||||||||| |||||||||||||||| ||||||||| |||||||| | ||||||||    
T  11394924 aaatggtgggacccctttccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 11394987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 11404651 - 11404714
Alignment:
Q  99 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
    ||||||||||||||||| |||||||||||||||| ||||||||| |||||||| | ||||||||    
T  11404651 aaatggtgggacccctttccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 11404714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 77 - 163
Target Start/End: Original strand, 25629101 - 25629185
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||| ||| |||||||||||  |||||||||||||||||||||||| | |||| ||||||||| |||||||| | |||||||||    
T  25629101 aaggctgtgtacaatacaccaaa--tggtgggaccccttcccggaccctacatatgcgggagctttagtgcaccgggttgccctttt 25629185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 30496476 - 30496332
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    ||||||||||||| |||||||||| | |||| || |||||| | ||||| | |||||||||||| || |||||    ||||||| || |||||||||||     
T  30496476 aaagttgttgtcacgtgactgaaaggtcacgtgttcaagtcatggaaacagcctcttgtgtaaacac-gggta----aggctgcatacaatacaccaaa- 30496383  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccga 152  Q
     ||| ||||| |||||||||||| ||| ||||| |||||||| |||||||||    
T  30496382 -tggggggactccttcccggaccgtgcttatgatggagctttagtgcaccga 30496332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 49938746 - 49938613
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    ||||||||||||| |||||||||| | ||| ||| |||||||| ||||| | ||||||||||||||| ||||| |       | ||| |||||||| |||    
T  49938746 aaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaacggggtaag-------gtgtacaatacacc-aaa 49938655  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagcttt 142  Q
    ||||||||||||||||||  ||||||| |||| |||||||||    
T  49938654 atggtgggaccccttcccataccctgcatatgcgggagcttt 49938613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 32478941 - 32478810
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    ||||||||||||||||||| || | | ||| ||| |||||||| |||||   |||| ||||||||||||||||    ||||||     |||||||||||     
T  32478941 aaagttgttgtcatgtgaccgagaggtcacaggttcaagtcctggaaacaacctctagtgtaaaaacagggta----aggctg-----aatacaccaaa- 32478852  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttg 143  Q
     ||||||||||||||||||||||| ||||||| ||||||||||    
T  32478851 -tggtgggaccccttcccggacccagcgtatgcgggagctttg 32478810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 163
Target Start/End: Original strand, 32484307 - 32484369
Alignment:
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||||||||||||||||||||| |||| ||||||||| |||||||| | |||||||||    
T  32484307 atggtgggaccccttcccggaccctgcatatgcgggagctttagtgcaccgggttgccctttt 32484369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 14983906 - 14983971
Alignment:
Q  99 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||| |||  | ||||||||||    
T  14983906 aaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgtaccatgttgccctttta 14983971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 40553998 - 40553937
Alignment:
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
    |||||| ||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  40553998 atggtgtgaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 40553937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 141
Target Start/End: Original strand, 49796849 - 49796911
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctt 141  Q
    ||||||||||| |||||||||||  |||||||||||||||||| |||||||||||| ||||||||    
T  49796849 aaggctgcgtacaatacaccaaa--tggtgggaccccttcccgaaccctgcgtatgcgggagctt 49796911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 149
Target Start/End: Original strand, 21489143 - 21489210
Alignment:
Q  81 ctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcac 149  Q
    ||||||| ||| |||||||| |||||||||||||||||| |||||||||||| ||||||||| ||||||    
T  21489143 ctgcgtacaatgcaccaaaa-tggtgggaccccttcccgaaccctgcgtatgcgggagctttcgtgcac 21489210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 36816466 - 36816383
Alignment:
Q  79 ggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||| ||||||||||||| |||||||| |||||| |||||||| ||||| ||||||||| ||| |||| | |||||||||    
T  36816466 ggctgcgtacaatacaccaaaaa-ggtgggactccttcctggaccctgtgtatgcgggagctttagtgtaccgggttgccctttt 36816383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 38786681 - 38786745
Alignment:
Q  99 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||||||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  38786681 aaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 38786745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 151
Target Start/End: Complemental strand, 39077948 - 39077807
Alignment:
Q  3 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 102  Q
    |||||||||||||||| ||||| | ||||||| |||||||| ||||| | ||||||||| ||||||||||    |||| |||||| |||| |||  ||||    
T  39077948 agttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacagggt----aaggttgcgtacaatatacc--aaat 39077856  T
Q  103 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    |||| |||  ||| ||||||||||| |||| ||||||| | ||||||||    
T  39077855 ggtgagacatctttccggaccctgcatatgcgggagctctagtgcaccg 39077807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 149
Target Start/End: Complemental strand, 41018945 - 41018807
Alignment:
Q  5 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatgg 104  Q
    ||||||||| |||||||||| | ||||||| |||||||| |||||   |||||||||||||  |||||    |||||| |||| ||||||||  |||| |    
T  41018945 ttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaattagggt----aaggctacgtacaatacacc--aaatag 41018852  T
Q  105 tgggaccccttcccggaccctgcgtatgagggagctttggtgcac 149  Q
    |||||||||||||| |||| ||||||||  || ||||| ||||||    
T  41018851 tgggaccccttcccagaccttgcgtatggaggggctttagtgcac 41018807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 20405072 - 20405210
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacaccaa 98  Q
    ||||||||||||||||||||| || | ||||||       ||||||||| | ||||||||||||||  |||||||    ||  |||||| ||||||| ||    
T  20405072 aaagttgttgtcatgtgactggaaggtcacggg-------cctagaaacagcctcttgtgtaaaaaaacagggta----agattgcgtacaatacactaa 20405160  T
Q  99 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgca 148  Q
     ||||||||||||||||||||||||| || |||| ||||||||| |||||    
T  20405161 taatggtgggaccccttcccggaccccgcatatgcgggagctttagtgca 20405210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 50555718 - 50555655
Alignment:
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||||||| ||||||||||||||||||||||||  |||| ||| |||||||| |||||||||||    
T  50555718 aatggtggaaccccttcccggaccctgcgtatgcaggagttttagtgcaccgggctgccctttt 50555655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 162
Target Start/End: Original strand, 25388249 - 25388311
Alignment:
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
    |||||||||||||||||||||||||||||||||   ||||||| |||||||| | ||||||||    
T  25388249 aatggtgggaccccttcccggaccctgcgtatgcatgagctttagtgcaccgggttgcccttt 25388311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 14590816 - 14590881
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 66  Q
    |||||||||||||||||||||||| | ||||| | |||||||||||||| | ||||||| ||||||    
T  14590816 aaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctcttgtctaaaaa 14590881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 36589815 - 36589876
Alignment:
Q  98 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 159  Q
    |||||||||||||||||||| | |||||  ||||| |||||||||||||||||| |||||||    
T  36589815 aaaatggtgggaccccttcctgaaccctatgtatgcgggagctttggtgcaccgggctgccc 36589876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 487291 - 487128
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||||||| | ||||||| |||||| | |||||   |||||||||| ||||||    ||| || |||||||| ||||||| |||    
T  487291 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctcttgtgtataaaaca----aggtaaagctgcgtacaatacactaaa 487196  T
Q  100 a-------atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccct 160  Q
    |       |||| ||||||||||||||||  ||||| ||| ||||||||| |||||||| || |||||    
T  487195 atggtgggatggcgggaccccttcccggattctgcgaatgcgggagctttagtgcaccgggcagccct 487128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 17315454 - 17315382
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggta 73  Q
    |||||||||||||||||||||||| | ||||||| ||| |||| |||||   |||||||||||||||| ||||    
T  17315454 aaagttgttgtcatgtgactgaaaggtcacgggttcaattcctcgaaacaacctcttgtgtaaaaacaaggta 17315382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 37494830 - 37494972
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||| |||| |||||||| | ||| ||| |||||||| |||||   |||||||||||||| |||||||    ||| ||| || |||| ||||||    
T  37494830 aaagttgttgccatgcgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggta----aggttgcatacaatataccaaa 37494925  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgca 148  Q
      |||||||||||||| | ||||||||||||||  |||||||| |||||    
T  37494926 --tggtgggacccctttcgggaccctgcgtatgcaggagctttagtgca 37494972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 42164300 - 42164232
Alignment:
Q  5 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggta 73  Q
    |||||||||||||||||||| | ||||||| |||||| | |||||   |||||||||||||||||||||    
T  42164300 ttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctcttgtgtaaaaacagggta 42164232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 139
Target Start/End: Complemental strand, 7385628 - 7385499
Alignment:
Q  5 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgtaaaatacaccaaaaatg 103  Q
    |||||||||||||||||||| | ||||||| |||| ||| ||||| | ||| ||||| ||||| |||||    |||| || ||  ||||||||  |||||    
T  7385628 ttgttgtcatgtgactgaaaggtcacgggttcaagccctggaaacagcctcatgtgtaaaaaatagggt----aaggttgtgtgcaatacacc--aaatg 7385535  T
Q  104 gtgggaccccttcccggaccctgcgtatgagggagc 139  Q
    ||||||||| ||||||||||||| ||||| ||||||    
T  7385534 gtgggaccctttcccggaccctgtgtatgcgggagc 7385499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 151
Target Start/End: Original strand, 16494272 - 16494343
Alignment:
Q  80 gctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    ||||| || |||||||||||||||||||||||| ||||| ||||||| ||||| || |||||| ||| ||||    
T  16494272 gctgcatacaatacaccaaaaatggtgggaccctttcccagaccctgtgtatgcggaagctttagtgtaccg 16494343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 163
Target Start/End: Original strand, 35532077 - 35532128
Alignment:
Q  112 ccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||||||||||||||| ||||||||| |||||||| | |||||||||    
T  35532077 ccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 35532128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 32629418 - 32629293
Alignment:
Q  7 gttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtg 106  Q
    |||||||||||||||||| | ||||||| ||| |||| ||||| | |||||||  |||||||||||    ||||| || | | ||||||| ||| ||| |    
T  32629418 gttgtcatgtgactgaaaggtcacgggttcaaatcctcgaaacagcctcttgtaaaaaaacagggt----aaggccgcct-acatacacc-aaattggcg 32629325  T
Q  107 ggaccccttcccggaccctgcgtatgagggag 138  Q
    ||||||||||||||||| |||||||| |||||    
T  32629324 ggaccccttcccggaccttgcgtatgtgggag 32629293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 55766622 - 55766466
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacac-gggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||||||||| | || | ||| |||| |||||  | ||||| || ||||||||  |||||||||    ||||||||||| |||||||        
T  55766622 aaagttgttgtcatgtgaccggaaggtcacggggttcaagttttggaaacagtttcttgtgtgtaaacagggt----aaggctgcgtacaatacac--tg 55766529  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
    |||||||| ||||| ||||||||| |||||||| | ||||||| |||||||| | ||||||||    
T  55766528 aatggtggaaccccatcccggaccttgcgtatgcgagagctttagtgcaccgggatgcccttt 55766466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 3580992 - 3580859
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaac-agggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||||||| | |||| || |||||| | |||||   ||||||||||||||| | ||||    |||||| ||  |||||||||||    
T  3580992 aaagttgttgtcatgtgactgaaaagtcacgagttcaagtc-tggaaac---ctcttgtgtaaaaaccatggta----aggctgtgtgcaatacaccaaa 3580901  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttg 143  Q
      || | ||||||||||||||||||||| |||| ||||||||||    
T  3580900 --tgctaggaccccttcccggaccctgcatatgtgggagctttg 3580859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 19027986 - 19028047
Alignment:
Q  102 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    ||||||||| |||||||||||||  | |||| ||||||||| |||||||| |||||||||||    
T  19027986 tggtgggactccttcccggaccccacttatgcgggagctttagtgcaccgggctgccctttt 19028047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 30581537 - 30581485
Alignment:
Q  89 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagcttt 142  Q
    |||||||||||| |||||||||||||||||||||||||| ||||  ||||||||    
T  30581537 aatacaccaaaa-tggtgggaccccttcccggaccctgcatatgtaggagcttt 30581485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 39029217 - 39029080
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||| ||||||| ||| | ||  ||| |||| | | ||||| | |||||||||||||| |||||||    |||||| ||| ||||||| |||    
T  39029217 aaagttgttgtcgtgtgactaaaaggtcataggttcaagccttggaaacagcctcttgtgtaaaaaacagggta----aggctgtgtacaatacacgaaa 39029122  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagcttt 142  Q
    | |||||||||| ||| ||||||||||| |||| |||||||||    
T  39029121 a-tggtgggaccactttccggaccctgcatatgcgggagcttt 39029080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 142
Target Start/End: Original strand, 44718641 - 44718682
Alignment:
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagcttt 142  Q
    |||||||||||||||||| ||||||||||||| |||||||||    
T  44718641 atggtgggaccccttcccagaccctgcgtatgcgggagcttt 44718682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 28494223 - 28494287
Alignment:
Q  99 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||||||||||||||||||| || ||||| |||| ||||||| | |||||||| |||||| ||||    
T  28494223 aaatggtgggaccccttcccagatcctgcatatgcgggagctctagtgcaccgggctgccttttt 28494287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 159
Target Start/End: Original strand, 54967092 - 54967151
Alignment:
Q  99 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 159  Q
    ||||||||||||||||||||| ||||| | |||| ||||||||| |||||||| |||||||    
T  54967092 aaatggtgggaccccttcccgtaccctacatatgcgggagcttt-gtgcaccgggctgccc 54967151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 161
Target Start/End: Complemental strand, 8473705 - 8473621
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggacccctt-cccgga-ccctgcgtatgagggagctttggtgcaccgagctgccctt 161  Q
    |||||||| || |||||||||||  |||||||||||||| |||||| |||||| |||| ||||||||| |||||||| | |||||||    
T  8473705 aaggctgcatacaatacaccaaa--tggtgggaccccttccccggacccctgcatatgcgggagctttagtgcaccgggttgccctt 8473621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 163
Target Start/End: Complemental strand, 9987917 - 9987833
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
    |||||||| || |||||||||||  ||||||||||||||||  |||| ||| |||| |||||||||  ||||||| |||||| ||||    
T  9987917 aaggctgcatacaatacaccaaa--tggtgggaccccttccttgaccttgcatatgcgggagctttaatgcaccgggctgccttttt 9987833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 164
Target Start/End: Original strand, 7038041 - 7038189
Alignment:
Q  10 gtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaaaaatggtggg 108  Q
    ||||||||||||||| | ||| ||| |||||||| ||||| |  |||||||||||||     ||||| ||| || |||| |||||||||||| |||||||    
T  7038041 gtcatgtgactgaaaggtcacaggttcaagtcct-gaaacagcttcttgtgtaaaaaa----tagggtaagacttcgtacaatacaccaaaa-tggtggg 7038134  T
Q  109 accccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
     | ||| |||||||||||||||| | |||||||| |||||| | | ||||||||||    
T  7038135 gcacctacccggaccctgcgtat-acggagctttagtgcactgggttgccctttta 7038189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 142
Target Start/End: Original strand, 2813181 - 2813242
Alignment:
Q  81 ctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagcttt 142  Q
    ||||||| |||||| ||| ||||||||||||| |||||| ||  |||||||| |||||||||    
T  2813181 ctgcgtacaatacatcaataatggtgggaccctttcccgaacgatgcgtatgcgggagcttt 2813242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 131
Target Start/End: Complemental strand, 35894540 - 35894492
Alignment:
Q  82 tgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtat 131  Q
    |||||| |||||||||||| |||||||||||||||||||| | |||||||    
T  35894540 tgcgtacaatacaccaaaa-tggtgggaccccttcccggatcatgcgtat 35894492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 8820581 - 8820613
Alignment:
Q  100 aatggtgggaccccttcccggaccctgcgtatg 132  Q
    ||||||||||||||||||| |||||||||||||    
T  8820581 aatggtgggaccccttcccagaccctgcgtatg 8820613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 30558 - 30713
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| | ||| ||| |||||||| ||||| | ||||||||||||| ||||||||||    ||||||| |||||||||||     
T  30558 aaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgtgtaaaa-cagggtaggg----ctgcgtacaatacaccaaa- 30651  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
     |||||||||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  30652 -tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 30713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 13179 - 13023
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| | ||| ||| |||||||| ||||| | |||||| ||||||||| ||||    |||||||||| |||||||| ||     
T  13179 aaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgcgtaaaaacaaggta----aggctgcgtacaatacaccgaa- 13085  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
     ||||||||||||||||| ||||||||||||| ||| ||||| |||||||| | |||||||||    
T  13084 -tggtgggaccccttcccagaccctgcgtatgcgggggctttagtgcaccgggttgccctttt 13023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 8 - 162
Target Start/End: Original strand, 58963 - 59114
Alignment:
Q  8 ttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtg 106  Q
    ||||||||||||||||| | ||||||| |||||||| ||||| | ||||||| |||||| |||||||    || ||||||| ||||||||||||||||||    
T  58963 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggta----agactgcgtacaatacaccaaaaatggtg 59058  T
Q  107 ggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
    |||||||||||| ||| ||||||||| ||||||||| ||||| || | ||||||||    
T  59059 ggaccccttcccagactctgcgtatgcgggagctttagtgcatcgggttgcccttt 59114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 60; Significance: 1e-25; HSPs: 4)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 46810 - 46967
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||||||||||  || | ||||||| ||||| || |||||   ||||||||||||||     ||||| |||| |||||| |||||||||||    
T  46810 aaagttgttgtcatgtgactagaaggtcacgggttcaagtgctggaaacaacctcttgtgtaaaaaa----tagggtaaggttgcgtacaatacaccaaa 46905  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 163  Q
      ||||||||||||||||||||||||||||||| ||||||||| |||||||| | |||||||||    
T  46906 --tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 46967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 24923 - 24786
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    |||||||||||||||||||||||| | || |||| ||||||     ||| | |||||||||||||| |||||||    |||||||||| || ||||||||    
T  24923 aaagttgttgtcatgtgactgaaaggtcatgggttcaagtc-----aacagcctcttgtgtaaaaaacagggta----aggctgcgtacaacacaccaaa 24833  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgca 148  Q
      |||||||||||||||||| |||||||||||| ||||||||| |||||    
T  24832 --tggtgggaccccttcccgaaccctgcgtatgcgggagctttagtgca 24786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 43709 - 43795
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggacccc-ttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    ||||||||||| ||||||||  ||||||||||||||| ||| |||||||||| |||| ||||||| | |||||| ||| ||||||||||    
T  43709 aaggctgcgtacaatacacc--aaatggtgggacccctttctcggaccctgcatatgcgggagctctagtgcactgagttgccctttta 43795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 46771 - 46727
Alignment:
Q  98 aaaatggtgggaccccttcccggaccctgcgtatgagggagcttt 142  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||    
T  46771 aaaatggtgggaccccttcccagaccctgcgtatgcgggagcttt 46727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 10789 - 10932
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 99  Q
    ||||||||||||||||||||| || | ||||||| ||||  ||  ||||   |||||||||||||| ||||||||||    ||||||  |||||||||||    
T  10789 aaagttgttgtcatgtgactggaaggtcacgggttcaaggtctgaaaacaacctcttgtgtaaaaaacagggtaggg----ctgcgtccaatacaccaaa 10884  T
Q  100 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcac 149  Q
      ||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  10885 --tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcac 10932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 10204 - 10080
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||||| ||| |||    || ||||||| |||||||||||     
T  10204 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-cagagta----agactgcgtacaatacaccaaat 10110  T
Q  101 atggtgggaccccttcccggaccctgcgtatg 132  Q
    |  |||||||||||||||||||||||| ||||    
T  10109 a--gtgggaccccttcccggaccctgcatatg 10080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 20532 - 20408
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||||| ||| |||    || ||||||| |||||||||||     
T  20532 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-cagagta----agactgcgtacaatacaccaaat 20438  T
Q  101 atggtgggaccccttcccggaccctgcgtatg 132  Q
    |  |||||||||||||||||||||||| ||||    
T  20437 a--gtgggaccccttcccggaccctgcatatg 20408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 1741 - 1599
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 100  Q
    |||||||||||||||||||||||| | || |||| ||||||||  ||||   ||||||||||||| |||| ||    ||||||| || |||||||||||     
T  1741 aaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacaacctcttgtgtaaaa-caggata----aggctgcatacaatacaccaaa- 1648  T
Q  101 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 150  Q
     || |||||||||||||||||||| ||||||| ||||||||| |||||||    
T  1647 -tgatgggaccccttcccggacccggcgtatgcgggagctttagtgcacc 1599  T

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Target: scaffold0015 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 48717 - 48632
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 164  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||||    
T  48717 aaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttta 48632  T

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Target: scaffold0254 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 4136 - 4258
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaa- 98  Q
    ||||||||||| |||||||||||| | ||||||| |||||||| |||||   ||||||||||||| ||||| |    |||| |||||| ||||||||||     
T  4136 aaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggat----aaggttgcgtacaatacaccaat 4231  T
Q  99 aaatggtgggaccccttcccggaccct 125  Q
    || ||||||||||||||||||||||||    
T  4232 aattggtgggaccccttcccggaccct 4258  T

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Target: scaffold0180 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 24216 - 24144
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 151  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||| |||| ||||||| | ||||||||    
T  24216 aaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccg 24144  T

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Target: scaffold0223 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 150
Target Start/End: Original strand, 11122 - 11252
Alignment:
Q  13 atgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccc 112  Q
    |||||||||||| | ||||||| |||||||| ||||| | ||||||||||||| ||  |||    ||||||| || |||||||||||  ||||||||| |    
T  11122 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-caaagta----aggctgcttacaatacaccaaa--tggtgggacac 11214  T
Q  113 cttcccggaccctgcgtatgagggagctttggtgcacc 150  Q
    ||||||||||||||| |||| ||||||| | |||||||    
T  11215 cttcccggaccctgcatatgcgggagctctagtgcacc 11252  T

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Target: scaffold0018 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 150
Target Start/End: Complemental strand, 72997 - 72879
Alignment:
Q  28 cacgggtccaagtcctagaaacg-gtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccct 125  Q
    ||||||| ||||||||||||||  |||||||||||||||| || ||||    ||||||| || |||||||||||  |||| | ||||||||||||| |||    
T  72997 cacgggttcaagtcctagaaacaagtctcttgtgtaaaaaacacggta----aggctgcctacaatacaccaaa--tggtagtaccccttcccggaacct 72904  T
Q  126 gcgtatgagggagctttggtgcacc 150  Q
    ||||||| ||||||||| |||||||    
T  72903 gcgtatgcgggagctttagtgcacc 72879  T

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Target: scaffold0954 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 162
Target Start/End: Original strand, 3596 - 3679
Alignment:
Q  77 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 162  Q
    ||||||||||| |||||||| ||  || ||||||||||||||| |||||||||||| || |||||| |||||||||| | ||||||    
T  3596 aaggctgcgtataatacaccgaa--tgatgggaccccttcccgaaccctgcgtatgcggcagctttagtgcaccgagtttcccttt 3679  T

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Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 226562 - 226497
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 66  Q
    |||||||||||||||||||||||| | ||||| | |||||||||||||| | ||||||| ||||||    
T  226562 aaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctcttgtctaaaaa 226497  T

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Target: scaffold0036 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 35167 - 35048
Alignment:
Q  8 ttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctctt--gtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggt 105  Q
    |||||||||||||| || | ||||||| ||||||||  |||| |||||||  |||| ||||||||||    ||||||||||| ||||||||  |||||||    
T  35167 ttgtcatgtgactgtaaggtcacgggttcaagtcctgaaaacagtctcttgtgtgtgaaaacagggt----aaggctgcgtacaatacacc--aaatggt 35074  T
Q  106 gggaccccttcccggaccctgcgtat 131  Q
    ||||||| |||| ||| | |||||||    
T  35073 gggaccctttcctggatcttgcgtat 35048  T

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Target: scaffold0031 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 43108 - 43176
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacag 69  Q
    |||||| ||||||||||| ||||| | |||| || || ||||||||||| | |||||||||||||||||    
T  43108 aaagttattgtcatgtgattgaaaggtcacgagttcaggtcctagaaacagcctcttgtgtaaaaacag 43176  T

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Target: scaffold0167 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 23671 - 23715
Alignment:
Q  99 aaatggtgggaccccttcccggaccctgcgtatgagggagctttg 143  Q
    |||||||||||||||||||| |||| || ||||| ||||||||||    
T  23671 aaatggtgggaccccttcccagaccttgagtatgtgggagctttg 23715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 83854 - 83894
Alignment:
Q  1 aaagttgttgtcatgtgactgaaacgacacgggtccaagtc 41  Q
    |||||||||||||||||||||||| | ||||||| ||||||    
T  83854 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 83894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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