View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7315_high_4 (Length: 565)
Name: NF7315_high_4
Description: NF7315
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7315_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 442; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 442; E-Value: 0
Query Start/End: Original strand, 19 - 551
Target Start/End: Original strand, 25046557 - 25047081
Alignment:
| Q |
19 |
gctataccacttcaaactaactcaccaaaagtgacatcaaaaaatcgaacatgaaattttaagttaaacacactaattctaagatcacaagttaactaca |
118 |
Q |
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|||||||||||||||||||||||| |||||||||||||| |||| ||||||| | ||||| ||||||||||||||||||||||||||||||| ||||||| |
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| T |
25046557 |
gctataccacttcaaactaactcatcaaaagtgacatcacaaaa-cgaacataagattttgagttaaacacactaattctaagatcacaagtcaactaca |
25046655 |
T |
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| Q |
119 |
cccgactaactaaacccaaaaacccaaataattgataaataactcaattgatttacattgacaagtacaactatatatcaatatcactgtgagtgcaatt |
218 |
Q |
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||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |
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| T |
25046656 |
ccctactaactaaacccaaaaacccaaataattcataaataactcaattgatttacattgacaagtacaactat----caatatca---tgagtgcaatt |
25046748 |
T |
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| Q |
219 |
gacactgtccttgctctttaaagattgtgcatctcgtgagatttcaaatttgtggcacgaaagttgccgtaggcgcagggctccaccaattccgtagtag |
318 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25046749 |
gatactgtccttgctctttaaagattgtgcatctcgtgagatttcaaatttgtggcacgaaagttgccgtaggcgcagggctccaccaattccgtagtag |
25046848 |
T |
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| Q |
319 |
tatttatttgtatcatgtgatactactagaaaccaaattgtgcaaggaagcttttcttattgctatttgagcatctcccatcaaaagaaaataagaaatc |
418 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25046849 |
tatttatttgtatcatgtgatactactagaaaccaaattgtgcaaggaagcttttcttattgctatttgagcatctcccatcaaaagaaaataagaaatc |
25046948 |
T |
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| Q |
419 |
taaagttgattttacaagtgatgcaatgtcactcataaacaatcaaagttactacttttaggaacatttttagcattttccttaattaaattataaaatt |
518 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |
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| T |
25046949 |
taaagttgattttacaactgatgcaatgtcactcataaacaatcaaagttactacttttaggaacatttttagcatttttcttaattaaattagaaaatt |
25047048 |
T |
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| Q |
519 |
tcaaacaacctcttaaggtatactcattttcat |
551 |
Q |
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| T |
25047049 |
ttaaacaacctcttaaggtatactcattttcat |
25047081 |
T |
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