View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7315_low_8 (Length: 371)
Name: NF7315_low_8
Description: NF7315
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7315_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 20 - 319
Target Start/End: Original strand, 41771299 - 41771593
Alignment:
| Q |
20 |
agtaggccaggagtggtggctgatgggctgagaacagcagcaggaatggacaagactgatacgggatacttggaggaagaaggaaccattcatgttgagc |
119 |
Q |
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| T |
41771299 |
agtaggccaggagtggtggctgatgggctgagagcagcagcaggaatggacaagactgatacgggatacttggaggaagaaggcaccattcatgttgagc |
41771398 |
T |
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| Q |
120 |
gtcgtcgtgagaaaatgtgatcataatcattatatgctataatatatatatgcaatgatgttgccatatgactactacaagattactagttttttgtaat |
219 |
Q |
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| T |
41771399 |
gtcgtcgtgagaaaatgtgatcataatcattatatgct---atatatatatgcaatgatgttgccatatgactactacatgattactagttttttgtaat |
41771495 |
T |
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| Q |
220 |
cataatcataatgtgttctgtaataataatattttgtgttgttcactgtgtttaatctcaatattgttaatcaatcaaatcccgctttaccttttttggt |
319 |
Q |
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| T |
41771496 |
cataatcataatgtgttctgtaataataata--ttgtgttgttcactgtgtttaatctcaatattgttaatcaatcaaatcccgctttaccttttttggt |
41771593 |
T |
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