View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7317_high_11 (Length: 443)

Name: NF7317_high_11
Description: NF7317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7317_high_11
NF7317_high_11
[»] chr8 (62 HSPs)
chr8 (189-426)||(8054787-8055060)
chr8 (17-101)||(8055101-8055185)
chr8 (362-426)||(41996615-41996679)
chr8 (362-425)||(32104819-32104882)
chr8 (362-426)||(9270091-9270155)
chr8 (362-426)||(44295386-44295450)
chr8 (371-426)||(5457150-5457205)
chr8 (305-359)||(9992656-9992710)
chr8 (303-361)||(16937406-16937464)
chr8 (364-421)||(16996873-16996930)
chr8 (307-358)||(31874077-31874128)
chr8 (362-425)||(36545762-36545825)
chr8 (303-358)||(44295305-44295360)
chr8 (303-357)||(10042750-10042804)
chr8 (303-359)||(9270010-9270066)
chr8 (362-426)||(32412860-32412924)
chr8 (362-426)||(5989700-5989764)
chr8 (303-359)||(15665528-15665584)
chr8 (362-426)||(31874154-31874218)
chr8 (362-425)||(7269445-7269508)
chr8 (379-426)||(14115808-14115855)
chr8 (379-426)||(17019205-17019252)
chr8 (379-426)||(17549642-17549689)
chr8 (362-421)||(31147786-31147845)
chr8 (303-357)||(37658955-37659009)
chr8 (389-426)||(9992764-9992801)
chr8 (362-418)||(5917730-5917786)
chr8 (362-426)||(7281107-7281171)
chr8 (303-359)||(36545850-36545906)
chr8 (308-359)||(5989624-5989675)
chr8 (303-357)||(32256792-32256847)
chr8 (362-424)||(5328037-5328099)
chr8 (251-336)||(1810337-1810421)
chr8 (251-326)||(12329556-12329628)
chr8 (303-356)||(26937514-26937567)
chr8 (362-414)||(3680993-3681045)
chr8 (306-346)||(14115875-14115914)
chr8 (303-359)||(14530977-14531033)
chr8 (362-426)||(16937319-16937383)
chr8 (303-347)||(27534480-27534524)
chr8 (362-421)||(37129659-37129715)
chr8 (258-314)||(41996511-41996567)
chr8 (307-357)||(7269535-7269585)
chr8 (241-295)||(9501503-9501557)
chr8 (303-361)||(13977390-13977448)
chr8 (309-359)||(15237706-15237756)
chr8 (308-361)||(23766736-23766787)
chr8 (380-422)||(26582872-26582914)
chr8 (306-359)||(11655979-11656032)
chr8 (381-426)||(15827099-15827144)
chr8 (246-295)||(31202371-31202420)
chr8 (307-359)||(284544-284596)
chr8 (307-359)||(631281-631333)
chr8 (307-359)||(817093-817145)
chr8 (362-422)||(6833550-6833610)
chr8 (362-426)||(10042842-10042906)
chr8 (378-426)||(12244196-12244244)
chr8 (303-359)||(14327468-14327524)
chr8 (366-426)||(16808951-16809010)
chr8 (309-337)||(31147891-31147919)
chr8 (303-355)||(32061783-32061835)
chr8 (303-359)||(32920641-32920697)
[»] chr2 (64 HSPs)
chr2 (240-426)||(7640336-7640544)
chr2 (362-426)||(43929336-43929400)
chr2 (362-426)||(3390502-3390566)
chr2 (362-426)||(5930493-5930557)
chr2 (362-426)||(25771515-25771579)
chr2 (364-421)||(43566946-43567003)
chr2 (364-421)||(44167695-44167752)
chr2 (362-426)||(3603055-3603119)
chr2 (307-359)||(5930416-5930468)
chr2 (362-426)||(27024119-27024183)
chr2 (303-358)||(3390421-3390476)
chr2 (303-358)||(25771434-25771489)
chr2 (303-361)||(6089882-6089940)
chr2 (303-361)||(25516483-25516541)
chr2 (303-361)||(27191402-27191460)
chr2 (303-361)||(27841216-27841274)
chr2 (303-361)||(40125378-40125436)
chr2 (303-361)||(42105819-42105877)
chr2 (303-361)||(44167776-44167834)
chr2 (304-357)||(10589028-10589081)
chr2 (364-421)||(25516565-25516622)
chr2 (364-421)||(27191321-27191378)
chr2 (364-421)||(27841135-27841192)
chr2 (364-421)||(36508002-36508059)
chr2 (303-361)||(3464948-3465006)
chr2 (303-357)||(15674045-15674099)
chr2 (303-361)||(37883642-37883700)
chr2 (303-357)||(41176851-41176905)
chr2 (303-361)||(43566866-43566922)
chr2 (365-418)||(3465030-3465083)
chr2 (303-426)||(16879945-16880084)
chr2 (362-426)||(16992078-16992142)
chr2 (306-358)||(27024209-27024261)
chr2 (307-359)||(29812684-29812736)
chr2 (362-421)||(38822145-38822202)
chr2 (362-425)||(9715525-9715588)
chr2 (306-357)||(9715616-9715667)
chr2 (303-357)||(19581074-19581128)
chr2 (361-426)||(25237306-25237371)
chr2 (362-426)||(41842020-41842082)
chr2 (246-345)||(5754207-5754309)
chr2 (362-421)||(6089963-6090020)
chr2 (241-326)||(41797535-41797617)
chr2 (380-426)||(11931002-11931048)
chr2 (303-361)||(26491292-26491350)
chr2 (307-361)||(36507924-36507978)
chr2 (364-425)||(26491374-26491435)
chr2 (303-359)||(41841938-41841995)
chr2 (362-426)||(7443546-7443610)
chr2 (362-426)||(25623025-25623089)
chr2 (303-359)||(25623114-25623170)
chr2 (362-425)||(40125459-40125522)
chr2 (395-426)||(44951522-44951553)
chr2 (392-426)||(16720884-16720918)
chr2 (364-426)||(42105732-42105794)
chr2 (396-425)||(43929309-43929338)
chr2 (303-359)||(5071439-5071495)
chr2 (303-339)||(17037738-17037774)
chr2 (303-335)||(19953373-19953405)
chr2 (362-418)||(19953640-19953696)
chr2 (258-326)||(34416995-34417063)
chr2 (303-339)||(35353641-35353677)
chr2 (381-425)||(35353732-35353776)
chr2 (362-426)||(37883723-37883787)
[»] chr6 (36 HSPs)
chr6 (236-426)||(19759710-19759922)
chr6 (362-426)||(23843404-23843468)
chr6 (362-426)||(13234088-13234152)
chr6 (362-421)||(16913398-16913457)
chr6 (303-358)||(16913317-16913372)
chr6 (303-361)||(12576545-12576603)
chr6 (362-426)||(20845078-20845142)
chr6 (303-359)||(32457635-32457691)
chr6 (364-422)||(31748029-31748087)
chr6 (380-426)||(32457734-32457780)
chr6 (303-359)||(548934-548990)
chr6 (378-426)||(15128133-15128181)
chr6 (306-357)||(32804286-32804337)
chr6 (303-357)||(4663891-4663945)
chr6 (317-359)||(20845011-20845053)
chr6 (381-426)||(5417178-5417223)
chr6 (361-426)||(33194674-33194739)
chr6 (303-359)||(13234177-13234232)
chr6 (362-426)||(32804365-32804429)
chr6 (382-421)||(8633176-8633215)
chr6 (306-357)||(10744571-10744622)
chr6 (317-359)||(15128218-15128260)
chr6 (307-426)||(32574446-32574570)
chr6 (381-426)||(548846-548891)
chr6 (307-359)||(891581-891633)
chr6 (362-421)||(11426014-11426071)
chr6 (362-414)||(31804318-31804370)
chr6 (307-359)||(33194598-33194650)
chr6 (303-347)||(34020607-34020651)
chr6 (362-433)||(4663793-4663864)
chr6 (379-422)||(7049332-7049375)
chr6 (303-345)||(7049236-7049278)
chr6 (246-295)||(1302647-1302696)
chr6 (306-339)||(8644237-8644270)
chr6 (381-426)||(10744672-10744717)
chr6 (362-421)||(12576465-12576522)
[»] scaffold0722 (1 HSPs)
scaffold0722 (236-426)||(5506-5718)
[»] chr1 (60 HSPs)
chr1 (236-361)||(21326395-21326520)
chr1 (294-426)||(44562729-44562883)
chr1 (362-426)||(23320510-23320574)
chr1 (251-361)||(5832164-5832280)
chr1 (362-426)||(22344892-22344956)
chr1 (364-421)||(4564589-4564646)
chr1 (362-426)||(15276430-15276494)
chr1 (362-421)||(1768036-1768095)
chr1 (303-357)||(52839412-52839466)
chr1 (362-426)||(630764-630829)
chr1 (304-361)||(630852-630909)
chr1 (362-426)||(5832303-5832368)
chr1 (238-361)||(23320376-23320487)
chr1 (361-426)||(27469688-27469753)
chr1 (303-359)||(17579757-17579813)
chr1 (362-426)||(21326543-21326607)
chr1 (362-426)||(38646654-38646718)
chr1 (303-358)||(6212956-6213011)
chr1 (362-421)||(15698270-15698329)
chr1 (303-358)||(22344982-22345037)
chr1 (362-425)||(40488378-40488441)
chr1 (362-421)||(45659112-45659171)
chr1 (305-359)||(13691827-13691881)
chr1 (364-425)||(36621424-36621485)
chr1 (362-426)||(23257158-23257222)
chr1 (378-426)||(38644777-38644825)
chr1 (362-418)||(40992406-40992462)
chr1 (364-426)||(28213120-28213182)
chr1 (303-357)||(44514061-44514115)
chr1 (380-426)||(49651932-49651978)
chr1 (303-357)||(52839510-52839564)
chr1 (362-411)||(900192-900241)
chr1 (365-426)||(52752096-52752157)
chr1 (303-359)||(14717312-14717367)
chr1 (362-426)||(32539170-32539234)
chr1 (303-359)||(38646573-38646629)
chr1 (362-433)||(52839600-52839671)
chr1 (362-424)||(35077872-35077934)
chr1 (313-359)||(45659041-45659087)
chr1 (381-426)||(12967712-12967757)
chr1 (362-418)||(14717230-14717287)
chr1 (303-356)||(46589165-46589217)
chr1 (315-359)||(8893294-8893338)
chr1 (362-426)||(10877416-10877480)
chr1 (258-326)||(15791607-15791675)
chr1 (251-295)||(51417928-51417972)
chr1 (302-357)||(33177667-33177722)
chr1 (304-339)||(48655155-48655190)
chr1 (307-361)||(12148115-12148169)
chr1 (303-348)||(22032169-22032215)
chr1 (309-359)||(35077959-35078009)
chr1 (318-356)||(37685168-37685206)
chr1 (318-356)||(37700312-37700350)
chr1 (306-343)||(8937612-8937648)
chr1 (307-359)||(10877338-10877391)
chr1 (246-295)||(28678295-28678344)
chr1 (263-336)||(32784047-32784119)
chr1 (362-414)||(6212878-6212930)
chr1 (251-295)||(37825474-37825518)
chr1 (265-345)||(42276298-42276377)
[»] chr7 (67 HSPs)
chr7 (263-433)||(43807123-43807315)
chr7 (245-426)||(30992803-30993008)
chr7 (362-426)||(26017638-26017702)
chr7 (362-433)||(23732366-23732437)
chr7 (362-426)||(40775337-40775401)
chr7 (362-426)||(47749804-47749868)
chr7 (303-361)||(24470384-24470442)
chr7 (303-361)||(24475332-24475390)
chr7 (306-359)||(25855289-25855342)
chr7 (362-426)||(135125-135189)
chr7 (362-426)||(25855200-25855264)
chr7 (364-421)||(8611608-8611665)
chr7 (364-421)||(49166998-49167055)
chr7 (362-426)||(13008653-13008717)
chr7 (303-359)||(47749723-47749779)
chr7 (303-358)||(40775256-40775311)
chr7 (363-426)||(42490774-42490837)
chr7 (306-361)||(49166919-49166974)
chr7 (305-359)||(7985883-7985937)
chr7 (303-361)||(8611689-8611747)
chr7 (303-357)||(28015345-28015399)
chr7 (380-422)||(35661612-35661654)
chr7 (364-421)||(24475414-24475471)
chr7 (364-421)||(40476780-40476837)
chr7 (306-355)||(47156388-47156437)
chr7 (362-426)||(7985962-7986026)
chr7 (362-426)||(8319385-8319449)
chr7 (303-359)||(29804745-29804801)
chr7 (303-357)||(43483583-43483637)
chr7 (364-421)||(24470466-24470523)
chr7 (306-359)||(44681454-44681506)
chr7 (362-426)||(9933917-9933981)
chr7 (246-326)||(21990583-21990663)
chr7 (303-359)||(23732462-23732518)
chr7 (362-422)||(35141735-35141795)
chr7 (304-348)||(38649438-38649482)
chr7 (362-426)||(43483670-43483734)
chr7 (362-421)||(47156464-47156521)
chr7 (382-421)||(11001934-11001973)
chr7 (303-358)||(16263376-16263431)
chr7 (306-357)||(35141824-35141875)
chr7 (251-336)||(40761519-40761600)
chr7 (362-425)||(46918470-46918533)
chr7 (252-326)||(28665031-28665105)
chr7 (303-356)||(21329368-21329420)
chr7 (303-359)||(33530537-33530591)
chr7 (306-358)||(14734120-14734172)
chr7 (307-359)||(24045301-24045353)
chr7 (362-418)||(37399696-37399752)
chr7 (362-418)||(39090186-39090242)
chr7 (362-429)||(15123957-15124024)
chr7 (303-357)||(8319303-8319357)
chr7 (306-360)||(10250549-10250603)
chr7 (387-425)||(14734030-14734068)
chr7 (325-359)||(42490713-42490747)
chr7 (391-433)||(43098676-43098718)
chr7 (379-424)||(772530-772575)
chr7 (380-425)||(14707671-14707716)
chr7 (362-427)||(35135162-35135227)
chr7 (378-426)||(5025036-5025084)
chr7 (303-350)||(5025134-5025182)
chr7 (251-295)||(11832939-11832983)
chr7 (362-406)||(19895651-19895695)
chr7 (309-361)||(26017725-26017777)
chr7 (303-339)||(29804977-29805013)
chr7 (362-418)||(41748487-41748543)
chr7 (362-426)||(44681531-44681594)
[»] chr5 (51 HSPs)
chr5 (234-361)||(4726995-4727118)
chr5 (362-426)||(10924113-10924177)
chr5 (362-426)||(4726908-4726972)
chr5 (362-426)||(6887158-6887222)
chr5 (362-426)||(31645899-31645963)
chr5 (303-359)||(34893985-34894041)
chr5 (379-426)||(29310334-29310381)
chr5 (362-425)||(41063377-41063440)
chr5 (303-361)||(28618593-28618651)
chr5 (364-421)||(28618675-28618732)
chr5 (303-359)||(9035017-9035073)
chr5 (303-358)||(6887248-6887303)
chr5 (303-358)||(31645818-31645873)
chr5 (380-426)||(9034922-9034968)
chr5 (303-357)||(29310420-29310474)
chr5 (303-357)||(33486641-33486695)
chr5 (304-361)||(4070545-4070601)
chr5 (307-359)||(41358031-41358084)
chr5 (307-359)||(2415393-2415445)
chr5 (362-426)||(5378372-5378436)
chr5 (362-426)||(22397528-22397592)
chr5 (310-357)||(18472796-18472843)
chr5 (362-421)||(32390632-32390691)
chr5 (380-426)||(2415488-2415534)
chr5 (303-357)||(41554475-41554529)
chr5 (303-356)||(37424982-37425035)
chr5 (303-359)||(19646110-19646166)
chr5 (303-359)||(41988173-41988229)
chr5 (382-421)||(4070642-4070681)
chr5 (303-358)||(6647983-6648038)
chr5 (362-412)||(28500787-28500837)
chr5 (304-349)||(8812231-8812276)
chr5 (378-426)||(28423783-28423831)
chr5 (362-426)||(33486549-33486613)
chr5 (362-418)||(34893904-34893960)
chr5 (236-294)||(5378254-5378313)
chr5 (362-425)||(19646022-19646085)
chr5 (379-418)||(35906384-35906423)
chr5 (380-426)||(20270802-20270848)
chr5 (364-426)||(34866499-34866561)
chr5 (302-358)||(34873848-34873905)
chr5 (243-295)||(6682030-6682082)
chr5 (362-426)||(8812131-8812195)
chr5 (362-418)||(13007762-13007818)
chr5 (362-418)||(13079215-13079271)
chr5 (362-418)||(13080223-13080279)
chr5 (306-359)||(15710532-15710587)
chr5 (309-357)||(22397619-22397667)
chr5 (242-282)||(39179987-39180027)
chr5 (303-359)||(40565224-40565280)
chr5 (315-359)||(41063465-41063509)
[»] chr4 (68 HSPs)
chr4 (268-426)||(42971992-42972172)
chr4 (302-426)||(23067828-23067974)
chr4 (262-361)||(52555788-52555887)
chr4 (236-426)||(46716874-46717095)
chr4 (362-426)||(50003156-50003220)
chr4 (362-426)||(9474519-9474583)
chr4 (362-426)||(9661923-9661987)
chr4 (362-426)||(14542492-14542556)
chr4 (306-359)||(28588553-28588606)
chr4 (362-426)||(4634353-4634417)
chr4 (303-359)||(9661842-9661898)
chr4 (362-426)||(12519726-12519790)
chr4 (362-426)||(44375244-44375308)
chr4 (303-358)||(14542582-14542637)
chr4 (306-361)||(54420779-54420834)
chr4 (307-361)||(16991865-16991919)
chr4 (362-426)||(31601338-31601403)
chr4 (362-426)||(2945207-2945271)
chr4 (303-359)||(3673612-3673668)
chr4 (303-359)||(41486564-41486620)
chr4 (362-426)||(41486645-41486709)
chr4 (303-358)||(4634272-4634327)
chr4 (362-426)||(32189053-32189114)
chr4 (380-426)||(34115631-34115677)
chr4 (303-361)||(46728987-46729044)
chr4 (364-418)||(54420701-54420755)
chr4 (306-359)||(4959644-4959697)
chr4 (362-411)||(52555716-52555765)
chr4 (362-433)||(1657539-1657610)
chr4 (309-359)||(1646010-1646060)
chr4 (307-357)||(3169033-3169083)
chr4 (362-424)||(9549537-9549599)
chr4 (303-356)||(43156765-43156819)
chr4 (364-418)||(53903681-53903735)
chr4 (251-336)||(478121-478205)
chr4 (307-348)||(1657650-1657691)
chr4 (303-359)||(5388504-5388560)
chr4 (362-421)||(20961521-20961578)
chr4 (362-426)||(28990368-28990432)
chr4 (311-359)||(34115721-34115769)
chr4 (362-426)||(44021551-44021615)
chr4 (243-336)||(394384-394473)
chr4 (304-359)||(7242838-7242893)
chr4 (380-426)||(38434687-38434733)
chr4 (251-336)||(43244491-43244578)
chr4 (291-361)||(44375331-44375401)
chr4 (308-357)||(37869488-37869536)
chr4 (303-359)||(4622780-4622836)
chr4 (303-359)||(11817061-11817117)
chr4 (362-426)||(40859716-40859780)
chr4 (319-359)||(46775925-46775965)
chr4 (304-359)||(29577154-29577209)
chr4 (382-421)||(30470107-30470145)
chr4 (362-425)||(37869398-37869461)
chr4 (307-357)||(1124929-1124979)
chr4 (382-416)||(4622699-4622733)
chr4 (307-357)||(6408433-6408483)
chr4 (368-426)||(6789856-6789914)
chr4 (258-295)||(24825562-24825599)
chr4 (380-425)||(29589342-29589387)
chr4 (304-357)||(30416693-30416746)
chr4 (362-426)||(7242749-7242813)
chr4 (378-426)||(15729961-15730009)
chr4 (362-426)||(43156846-43156910)
chr4 (378-426)||(46728900-46728948)
chr4 (309-357)||(51646088-51646136)
chr4 (362-406)||(51646163-51646207)
chr4 (321-361)||(53903617-53903657)
[»] chr3 (64 HSPs)
chr3 (362-426)||(54240156-54240220)
chr3 (303-431)||(45664218-45664360)
chr3 (362-426)||(1165376-1165440)
chr3 (303-359)||(20201127-20201183)
chr3 (303-359)||(20203309-20203365)
chr3 (362-426)||(43029753-43029817)
chr3 (362-421)||(47914578-47914637)
chr3 (306-361)||(50519782-50519837)
chr3 (364-421)||(3088648-3088705)
chr3 (303-359)||(1165465-1165521)
chr3 (362-426)||(21803600-21803664)
chr3 (362-426)||(43839498-43839562)
chr3 (362-421)||(14741310-14741369)
chr3 (303-361)||(22286816-22286874)
chr3 (303-361)||(41882475-41882533)
chr3 (364-421)||(22286735-22286792)
chr3 (306-359)||(35501828-35501881)
chr3 (364-421)||(41882394-41882451)
chr3 (362-426)||(29182588-29182652)
chr3 (380-433)||(22893688-22893741)
chr3 (306-359)||(25374139-25374192)
chr3 (303-359)||(1220284-1220340)
chr3 (303-359)||(21803519-21803575)
chr3 (362-426)||(35501739-35501803)
chr3 (362-425)||(20201039-20201102)
chr3 (362-425)||(20203221-20203284)
chr3 (303-354)||(22844040-22844091)
chr3 (303-358)||(43029672-43029727)
chr3 (309-359)||(53426799-53426849)
chr3 (303-359)||(1806529-1806585)
chr3 (303-359)||(4019591-4019646)
chr3 (382-426)||(20251747-20251791)
chr3 (362-421)||(28995293-28995350)
chr3 (362-414)||(32089922-32089974)
chr3 (303-359)||(37051613-37051669)
chr3 (307-359)||(40462064-40462116)
chr3 (362-425)||(25374051-25374114)
chr3 (363-426)||(27831183-27831246)
chr3 (382-421)||(33977909-33977948)
chr3 (362-425)||(40365296-40365359)
chr3 (362-417)||(53426868-53426923)
chr3 (303-349)||(42106100-42106146)
chr3 (303-359)||(20251640-20251697)
chr3 (306-339)||(25939565-25939598)
chr3 (306-359)||(43242803-43242856)
chr3 (311-359)||(7656546-7656592)
chr3 (362-418)||(21585969-21586025)
chr3 (362-426)||(32237976-32238040)
chr3 (362-414)||(33076382-33076434)
chr3 (303-346)||(25631692-25631735)
chr3 (363-426)||(29776670-29776732)
chr3 (263-336)||(30156399-30156468)
chr3 (312-359)||(33070152-33070199)
chr3 (363-426)||(40461975-40462038)
chr3 (307-357)||(2598076-2598126)
chr3 (306-359)||(34766973-34767024)
chr3 (304-357)||(40797023-40797075)
chr3 (306-359)||(43839587-43839638)
chr3 (394-426)||(7656495-7656527)
chr3 (361-425)||(25939460-25939524)
chr3 (331-359)||(29182677-29182705)
chr3 (307-357)||(33977994-33978041)
chr3 (382-422)||(34767075-34767115)
chr3 (364-404)||(50519861-50519901)
[»] scaffold0316 (2 HSPs)
scaffold0316 (362-426)||(12183-12247)
scaffold0316 (313-359)||(12272-12318)
[»] scaffold0157 (1 HSPs)
scaffold0157 (362-426)||(1121-1185)
[»] scaffold0024 (1 HSPs)
scaffold0024 (362-426)||(36599-36663)
[»] scaffold0045 (2 HSPs)
scaffold0045 (303-361)||(9715-9773)
scaffold0045 (389-421)||(9642-9674)
[»] scaffold0012 (1 HSPs)
scaffold0012 (362-426)||(244706-244770)
[»] scaffold0665 (2 HSPs)
scaffold0665 (379-426)||(1107-1154)
scaffold0665 (306-346)||(1174-1213)
[»] scaffold0150 (1 HSPs)
scaffold0150 (363-426)||(10291-10354)
[»] scaffold1294 (1 HSPs)
scaffold1294 (308-356)||(774-822)
[»] scaffold0340 (1 HSPs)
scaffold0340 (309-361)||(11844-11896)
[»] scaffold0018 (1 HSPs)
scaffold0018 (362-426)||(137038-137102)
[»] scaffold0011 (2 HSPs)
scaffold0011 (306-359)||(11011-11064)
scaffold0011 (381-426)||(11107-11148)
[»] scaffold0536 (1 HSPs)
scaffold0536 (263-326)||(2839-2902)
[»] scaffold0627 (1 HSPs)
scaffold0627 (380-426)||(6765-6811)


Alignment Details
Target: chr8 (Bit Score: 127; Significance: 2e-65; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 189 - 426
Target Start/End: Complemental strand, 8055060 - 8054787
Alignment:
Q  189 ttaagatgtttgaatgaatttttaaaactaaatttgataaagatatcaagccttttt-------------ctctttctcttatctcattctcaaacccta 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||             |||||||||||||||| |||||||||||||    
T  8055060 ttaagatgtttgaatgaatttttaaaactaaatttgataaagatatcaagcttttttttaagccttttttctctttctcttatctccttctcaaacccta 8054961  T
Q  276 gccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat-------------- 361  Q
    ||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||                  
T  8054960 gccgtcactcctttcttcttttcgttggaggggtgatttagggtcaatttttgacccaaaattatccctctaactcgtttttctatttcccttatattga 8054861  T
Q  362 --------attttcacatctgttacg-ttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
            |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8054860 aataagtgattttcacatctgttacgtttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 8054787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 8055185 - 8055101
Alignment:
Q  17 aaaaacataggttctagtgtctatgatttatatacgtgtcacaattacatatgtctctacaactaattacatatggaatggatga 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8055185 aaaaacataggttctagtgtctatgatttatatacgtgtcacaattacatatgtctctaccactaattacatatggaatggatga 8055101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 41996615 - 41996679
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  41996615 attttcacatctgttacgttttttattttgtgatttcatcgtcttcgtgcgacgttggtttgttc 41996679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 362 - 425
Target Start/End: Complemental strand, 32104882 - 32104819
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  32104882 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtacgacgttggtttgtt 32104819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 9270091 - 9270155
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  9270091 attttcacatctatttcgttttttattttgtgatttcgttgtcttcgtgcgacgttggtttgttc 9270155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 44295386 - 44295450
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  44295386 attttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 44295450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 5457150 - 5457205
Alignment:
Q  371 tctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5457150 tctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggttagttc 5457205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 305 - 359
Target Start/End: Original strand, 9992656 - 9992710
Alignment:
Q  305 ggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9992656 ggggtgatttagggtcaatttttgacccaaaatcacccctctaactcgtttttct 9992710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 303 - 361
Target Start/End: Complemental strand, 16937464 - 16937406
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 361  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  16937464 gaggggtgatttagggtcaatttttgatccaaaatcatccctctaacttgtttttctat 16937406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 364 - 421
Target Start/End: Complemental strand, 16996930 - 16996873
Alignment:
Q  364 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  16996930 tttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 16996873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 307 - 358
Target Start/End: Original strand, 31874077 - 31874128
Alignment:
Q  307 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 358  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  31874077 ggtgatttagggtcaatttttgacccaaaatcacccctctaactcgtttttc 31874128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 362 - 425
Target Start/End: Complemental strand, 36545825 - 36545762
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 425  Q
    |||||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||||    
T  36545825 attttcacatctatttcgttttttattttgtgattttgtcgtctttgtgcgacgttggtttgtt 36545762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 303 - 358
Target Start/End: Original strand, 44295305 - 44295360
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 358  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  44295305 gaggggtgatttagggtcaatttttgacccaaaatcatctctctaacttgtttttc 44295360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 357
Target Start/End: Original strand, 10042750 - 10042804
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 357  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  10042750 gaggggtgatttatggtcaatttttgacccaaaatcacccctctaactcgttttt 10042804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 9270010 - 9270066
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||    
T  9270010 gaggggtgatttatgatcaatttttgacccaaaatcacccctctaactcgtttttct 9270066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 32412860 - 32412924
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||| | ||  ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32412860 attttcacatttattttgttttttatcttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 32412924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 5989700 - 5989764
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| || |||||||||||||||||||| ||||| || ||||||||||||| |||||    
T  5989700 attttcacatctatttcgttttttattttgtgattttgtcgttttagtgcgacgttggtatgttc 5989764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 15665528 - 15665584
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||||||||||||||||||| ||||||| |||||||| |||||||||| ||||||||    
T  15665528 gaggggtgatttagggtcaacttttgacacaaaatcacccctctaacttgtttttct 15665584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 31874154 - 31874218
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| ||  ||||||||||||||||||| |||||||| |||| ||||||||||||||    
T  31874154 attttcacatctattttgttttttattttgtgattttgtcgtctttgtgcaacgttggtttgttc 31874218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 362 - 425
Target Start/End: Complemental strand, 7269508 - 7269445
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 425  Q
    |||||||||||| ||  ||||||||||||||||||| |||||| | ||||||||||||||||||    
T  7269508 attttcacatctattttgttttttattttgtgattttgtcgtcatagtgcgacgttggtttgtt 7269445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 379 - 426
Target Start/End: Complemental strand, 14115855 - 14115808
Alignment:
Q  379 gttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||    
T  14115855 gttttttattttgtgatttcgtcatcttcgtgtgacgttggtttgttc 14115808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 379 - 426
Target Start/End: Original strand, 17019205 - 17019252
Alignment:
Q  379 gttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||    
T  17019205 gttttttattttgtgatttggtcgtcttagtgcgacgttggtttgttc 17019252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 379 - 426
Target Start/End: Original strand, 17549642 - 17549689
Alignment:
Q  379 gttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||    
T  17549642 gttttttattttgtgatttggtcgtcttagtgcgacgttggtttgttc 17549689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 362 - 421
Target Start/End: Complemental strand, 31147845 - 31147786
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    |||||||||||| || || |||||||||||||||||||||||||| |||||| |||||||    
T  31147845 attttcacatctatttcgctttttattttgtgatttcgtcgtcttagtgcgaggttggtt 31147786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 303 - 357
Target Start/End: Original strand, 37658955 - 37659009
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 357  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| | ||||||    
T  37658955 gaggggtgatttagggtcaatttttgacacaaaatcacccctctaatttgttttt 37659009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 426
Target Start/End: Original strand, 9992764 - 9992801
Alignment:
Q  389 ttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9992764 ttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 9992801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 418
Target Start/End: Complemental strand, 5917786 - 5917730
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 418  Q
    |||||||||||| || |||||||| ||| |||||||||||||||| |||||||||||    
T  5917786 attttcacatctatttcgttttttctttcgtgatttcgtcgtcttagtgcgacgttg 5917730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 7281171 - 7281107
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| ||  ||||||||||||||||||||| |||| | ||||||| |||||||||||    
T  7281171 attttcacatctattttgttttttattttgtgatttcgccgtcatagtgcgacattggtttgttc 7281107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 359
Target Start/End: Complemental strand, 36545906 - 36545850
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||| ||||||| ||||||||| |||||||| |||| |||||||||||||||||||    
T  36545906 gagggatgatttaaggtcaatttgtgacccaatatcacccctctaactcgtttttct 36545850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 308 - 359
Target Start/End: Original strand, 5989624 - 5989675
Alignment:
Q  308 gtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||||||||||||||||||| |||||||||||   |||||||||||||||||    
T  5989624 gtgatttagggtcaatttttaacccaaaatcacatctctaactcgtttttct 5989675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 303 - 357
Target Start/End: Complemental strand, 32256847 - 32256792
Alignment:
Q  303 gaggggtgatttagggtcaat-ttttgacccaaaatcatccctctaactcgttttt 357  Q
    ||||||||||||||||||||| |||| ||||||||||| |||||||||| ||||||    
T  32256847 gaggggtgatttagggtcaatttttttacccaaaatcacccctctaacttgttttt 32256792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 362 - 424
Target Start/End: Original strand, 5328037 - 5328099
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgt 424  Q
    |||||||||||| ||  |||||||||||||||||||| | || ||||| ||||||||||||||    
T  5328037 attttcacatctattttgttttttattttgtgatttctttgttttcgtccgacgttggtttgt 5328099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 251 - 336
Target Start/End: Complemental strand, 1810421 - 1810337
Alignment:
Q  251 tctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaa 336  Q
    ||||||||||| ||| |||||||||| |||||  | ||||||||| |  |  |||||||||||||||||||| |||||||||||||    
T  1810421 tctcttatctccttcccaaaccctagtcgtcacccttttcttcttctttttagaggggtgatttagggtcaa-ttttgacccaaaa 1810337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 251 - 326
Target Start/End: Original strand, 12329556 - 12329628
Alignment:
Q  251 tctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttt 326  Q
    |||||| |||| ||||||||||||| |||||| || |||||||||||||   || ||||||||||| |||||||||    
T  12329556 tctcttctctccttctcaaaccctaaccgtcactcatttcttcttttca---gatgggtgatttagagtcaatttt 12329628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 356
Target Start/End: Original strand, 26937514 - 26937567
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttt 356  Q
    ||||||| ||||||||| || ||||||| |||||||| ||||||||||||||||    
T  26937514 gaggggttatttagggttaagttttgactcaaaatcacccctctaactcgtttt 26937567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 414
Target Start/End: Original strand, 3680993 - 3681045
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgac 414  Q
    |||||||||||| || |||||||||||||||||||| ||||| || |||||||    
T  3680993 attttcacatctatttcgttttttattttgtgattttgtcgttttagtgcgac 3681045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 346
Target Start/End: Complemental strand, 14115914 - 14115875
Alignment:
Q  306 gggtgatttagggtcaatttttgacccaaaatcatccctct 346  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  14115914 gggtgatttagg-tcaatttttgacccaaaatcatccctct 14115875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 359
Target Start/End: Complemental strand, 14531033 - 14530977
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||||||| ||||||||||||||||||| | |||||| || ||||| ||||||||||    
T  14531033 gaggggtggtttagggtcaatttttgactccaaatcacccttctaaatcgtttttct 14530977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 16937383 - 16937319
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||| ||||||| || ||||| || |||||||||||||||||||| ||||||| ||| |||||||    
T  16937383 atttacacatctatttcgtttctttttttgtgatttcgtcgtcttagtgcgaccttgttttgttc 16937319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 27534524 - 27534480
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctcta 347  Q
    ||||||||||||||||||||||||||| || ||||| ||||||||    
T  27534524 gaggggtgatttagggtcaatttttgatcccaaatcgtccctcta 27534480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 421
Target Start/End: Complemental strand, 37129715 - 37129659
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    |||||||||||| || ||||||  ||||||||||||||||||||| ||||||||||||||    
T  37129715 attttcacatctatttcgtttt--attttgtgatttcgtcgtctt-gtgcgacgttggtt 37129659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 314
Target Start/End: Original strand, 41996511 - 41996567
Alignment:
Q  258 tctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgattt 314  Q
    |||| |||| ||| ||||||||||| || |||||||||||| |||||||||||||||    
T  41996511 tctccttcttaaatcctagccgtcactcatttcttcttttcgtcggaggggtgattt 41996567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 357
Target Start/End: Complemental strand, 7269585 - 7269535
Alignment:
Q  307 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 357  Q
    |||||||||| ||||||||||||||| |||||| || ||||||||| ||||    
T  7269585 ggtgatttagagtcaatttttgaccctaaatcacccttctaactcgctttt 7269535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 241 - 295
Target Start/End: Original strand, 9501503 - 9501557
Alignment:
Q  241 tttttctctttctcttatctcattctcaaaccctagccgtcattcctttcttctt 295  Q
    |||||| | ||||||| |||| ||||||||||||||||||||| | |||||||||    
T  9501503 tttttccccttctcttctctccttctcaaaccctagccgtcatccttttcttctt 9501557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 361
Target Start/End: Original strand, 13977390 - 13977448
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 361  Q
    ||||||||||||| |||||| |||| ||||||||| | || ||||| ||||||||||||    
T  13977390 gaggggtgatttatggtcaaatttttacccaaaattacccatctaattcgtttttctat 13977448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 359
Target Start/End: Complemental strand, 15237756 - 15237706
Alignment:
Q  309 tgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||||||||||||||||| || | |||||| || ||||||||||||||||    
T  15237756 tgatttagggtcaatttttaactctaaatcacccatctaactcgtttttct 15237706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 361
Target Start/End: Original strand, 23766736 - 23766787
Alignment:
Q  308 gtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 361  Q
    |||||||| |||||||||||||||||||||||  ||  ||||||||||||||||    
T  23766736 gtgatttaaggtcaatttttgacccaaaatca--cccataactcgtttttctat 23766787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 422
Target Start/End: Complemental strand, 26582914 - 26582872
Alignment:
Q  380 ttttttattttgtgatttcgtcgtcttcgtgcgacgttggttt 422  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||    
T  26582914 ttttttattttgtgatttcgttgtcttagtgcgatgttggttt 26582872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 359
Target Start/End: Complemental strand, 11656032 - 11655979
Alignment:
Q  306 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||||||||||| |||||||||||||| ||||||  | || |||||||||||||    
T  11656032 gggtgatttaggatcaatttttgacccgaaatcactcttccaactcgtttttct 11655979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 426
Target Start/End: Original strand, 15827099 - 15827144
Alignment:
Q  381 tttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||| ||| |||||||||||||||| ||||||||||| |||||||    
T  15827099 tttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgttc 15827144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 295
Target Start/End: Original strand, 31202371 - 31202420
Alignment:
Q  246 ctctttctcttatctcattctcaaaccctagccgtcattcctttcttctt 295  Q
    ||||||||||| | || ||||||||||||||||||||  |||||||||||    
T  31202371 ctctttctcttctatccttctcaaaccctagccgtcacccctttcttctt 31202420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 359
Target Start/End: Complemental strand, 284596 - 284544
Alignment:
Q  307 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||||||| | ||||||||||||||||||| | | || ||||||||||||||    
T  284596 ggtgatttatgatcaatttttgacccaaaattaccgctttaactcgtttttct 284544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 359
Target Start/End: Original strand, 631281 - 631333
Alignment:
Q  307 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||||||| | ||||||||||||||||||| | | || ||||||||||||||    
T  631281 ggtgatttatgatcaatttttgacccaaaattaccgctttaactcgtttttct 631333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 359
Target Start/End: Original strand, 817093 - 817145
Alignment:
Q  307 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||||||| | ||||||||||||||||||| | | || ||||||||||||||    
T  817093 ggtgatttatgatcaatttttgacccaaaattaccgctttaactcgtttttct 817145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 422
Target Start/End: Original strand, 6833550 - 6833610
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggttt 422  Q
    ||||| |||||| ||  ||||||||||||||||||| || ||||| |||||| ||||||||    
T  6833550 atttttacatctattttgttttttattttgtgattttgttgtcttagtgcgatgttggttt 6833610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 10042842 - 10042906
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||| ||| || |||||||| |||  ||||||||||||||| |||| |||||| |||||||    
T  10042842 attttcacttctatttcgttttttctttcatgatttcgtcgtcttagtgcaacgttgttttgttc 10042906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 378 - 426
Target Start/End: Complemental strand, 12244244 - 12244196
Alignment:
Q  378 cgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||| ||| ||||||||||| |||| ||||||||||| |||||||    
T  12244244 cgttttttctttcgtgatttcgtcatcttagtgcgacgttgttttgttc 12244196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 14327468 - 14327524
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||||||| ||||||||||||||||||||| || ||| ||||| |  ||||||||||    
T  14327468 gaggggtggtttagggtcaatttttgaccccaattcacccctccatatcgtttttct 14327524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 426
Target Start/End: Original strand, 16808951 - 16809010
Alignment:
Q  366 tcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||| || |||||||||||||||||||| |||||||  ||| |||||||| ||||||    
T  16808951 tcacatctatttcgttttttattttgtgattt-gtcgtctaagtgggacgttgggttgttc 16809010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 337
Target Start/End: Complemental strand, 31147919 - 31147891
Alignment:
Q  309 tgatttagggtcaatttttgacccaaaat 337  Q
    |||||||||||||||||||||||||||||    
T  31147919 tgatttagggtcaatttttgacccaaaat 31147891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 355
Target Start/End: Original strand, 32061783 - 32061835
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttt 355  Q
    |||||||  ||||||||||||||||||||| |||||| || ||||| ||||||    
T  32061783 gaggggtagtttagggtcaatttttgaccccaaatcacccttctaaatcgttt 32061835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 32920641 - 32920697
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||||||| |||||||||||| |||| ||| |||||| | |||||| ||||||||||    
T  32920641 gaggggtggtttagggtcaatctttgcccctaaatcaccgctctaaatcgtttttct 32920697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 114; Significance: 1e-57; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 240 - 426
Target Start/End: Complemental strand, 7640544 - 7640336
Alignment:
Q  240 ctttttctctttctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaatca 339  Q
    ||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  7640544 ctttttctctttctcttctctccttctcaaaccctagccgtcactcctttcttcttttcgttggaggggtgatttagggtcaatttttgacccaaaatca 7640445  T
Q  340 tccctctaactcgtttttctat----------------------attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgtt 417  Q
     |||||||||||||||||||||                      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7640444 cccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgtt 7640345  T
Q  418 ggtttgttc 426  Q
    |||||||||    
T  7640344 ggtttgttc 7640336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 43929400 - 43929336
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  43929400 attttcacatatgttacgttttttattttgtgatttcgtcgtcttcgtgcgacattggtttgttc 43929336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 3390502 - 3390566
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3390502 attttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 3390566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 5930493 - 5930557
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  5930493 attttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgatgttggtttgttc 5930557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 25771515 - 25771579
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25771515 attttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 25771579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 364 - 421
Target Start/End: Original strand, 43566946 - 43567003
Alignment:
Q  364 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  43566946 tttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 43567003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 364 - 421
Target Start/End: Complemental strand, 44167752 - 44167695
Alignment:
Q  364 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  44167752 tttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 44167695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 3603055 - 3603119
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||| |||| || ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  3603055 attttcatatctatttcgttttttattttgtgatttcatcgtcttcgtgcgacgttggtttgttc 3603119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 307 - 359
Target Start/End: Original strand, 5930416 - 5930468
Alignment:
Q  307 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  5930416 ggtgatttagggttaatttttgacccaaaatcatccctctaactcgtttttct 5930468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 27024183 - 27024119
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| ||  |||||||||||||||||||||||||||||||||||| |||||||||||    
T  27024183 attttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacattggtttgttc 27024119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 303 - 358
Target Start/End: Original strand, 3390421 - 3390476
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 358  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  3390421 gaggggtgatttagggtcaatttttgacccaaaatcacccctctaacttgtttttc 3390476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 303 - 358
Target Start/End: Original strand, 25771434 - 25771489
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 358  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  25771434 gaggggtgatttagggtcaatttttgacccaaaatcacccctctaacttgtttttc 25771489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 361
Target Start/End: Original strand, 6089882 - 6089940
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 361  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||    
T  6089882 gaggggtgatttaaggtcaatttttgacccaaaatcacccctctaattcgtttttctat 6089940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 361
Target Start/End: Original strand, 25516483 - 25516541
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 361  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||    
T  25516483 gaggggtgatttagggtcaatatttgacccaaaatcacccctctaactcatttttctat 25516541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 361
Target Start/End: Complemental strand, 27191460 - 27191402
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 361  Q
    ||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  27191460 gagggatgatttagggtcaatttttgaccctaaatcacccctctaactcgtttttctat 27191402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 361
Target Start/End: Complemental strand, 27841274 - 27841216
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 361  Q
    ||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  27841274 gagggatgatttagggtcaatttttgaccctaaatcacccctctaactcgtttttctat 27841216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 361
Target Start/End: Original strand, 40125378 - 40125436
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 361  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||    
T  40125378 gaggggtgatttagggttaatttttgacccaaaatcacccctctaacttgtttttctat 40125436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 361
Target Start/End: Complemental strand, 42105877 - 42105819
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 361  Q
    |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||    
T  42105877 gaggggtgctttagggtcaatttttgacccaaaatcaccactctaactcgtttttctat 42105819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 361
Target Start/End: Complemental strand, 44167834 - 44167776
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 361  Q
    |||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||    
T  44167834 gaggggtgatatatggtcaatttttgacccaaaatcacccctctaactcgtttttctat 44167776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 357
Target Start/End: Original strand, 10589028 - 10589081
Alignment:
Q  304 aggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 357  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  10589028 aggggtgatttagggtcaatttttgacccaaaatcacccctctaacttgttttt 10589081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 364 - 421
Target Start/End: Original strand, 25516565 - 25516622
Alignment:
Q  364 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    |||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||    
T  25516565 tttcacatctatttcgttttttattttgtgatttcttcgtcttcgtgcgacgttggtt 25516622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 364 - 421
Target Start/End: Complemental strand, 27191378 - 27191321
Alignment:
Q  364 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    |||||||||| || |||||||||||||||||||||||||||||||| |||||||||||    
T  27191378 tttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtacgacgttggtt 27191321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 364 - 421
Target Start/End: Complemental strand, 27841192 - 27841135
Alignment:
Q  364 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    |||||||||| || |||||||||||||||||||||||||||||||| |||||||||||    
T  27841192 tttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtacgacgttggtt 27841135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 364 - 421
Target Start/End: Original strand, 36508002 - 36508059
Alignment:
Q  364 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    |||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||    
T  36508002 tttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 36508059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 361
Target Start/End: Original strand, 3464948 - 3465006
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 361  Q
    ||||||||||||||||||||||||||| ||||||||| | | |||||||||||||||||    
T  3464948 gaggggtgatttagggtcaatttttgatccaaaatcaccacactaactcgtttttctat 3465006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 357
Target Start/End: Complemental strand, 15674099 - 15674045
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 357  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||| ||||||    
T  15674099 gaggggtgatttagggtcaatttttgacccaaaatcactcctctaacttgttttt 15674045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 361
Target Start/End: Original strand, 37883642 - 37883700
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 361  Q
    ||||||||||||||||||||||||| | ||||||||| |||||||| ||||||||||||    
T  37883642 gaggggtgatttagggtcaatttttaatccaaaatcacccctctaattcgtttttctat 37883700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 357
Target Start/End: Original strand, 41176851 - 41176905
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 357  Q
    |||||||||||||||||||||||||||||||||| || || ||||||||||||||    
T  41176851 gaggggtgatttagggtcaatttttgacccaaaaccacccatctaactcgttttt 41176905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 361
Target Start/End: Original strand, 43566866 - 43566922
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 361  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  43566866 gaggggtgatt-agggtcaatttttgacccaaaatca-ccctctaactcgtttttctat 43566922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 3465030 - 3465083
Alignment:
Q  365 ttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 418  Q
    ||||||||| || ||||||||||||||||||||||||||||| |||||||||||    
T  3465030 ttcacatctatttcgttttttattttgtgatttcgtcgtctttgtgcgacgttg 3465083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 303 - 426
Target Start/End: Complemental strand, 16880084 - 16879945
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc-----tat-----------attttcacatctgttacgtttttta 386  Q
    ||||||||||||  ||||||||||||||||||||||| |||||| |||||||||||     |||           |||||||||| | ||  ||||||||    
T  16880084 gaggggtgatttttggtcaatttttgacccaaaatcacccctctcactcgtttttcccttttattgaaataagtgattttcacatttattttgtttttta 16879985  T
Q  387 ttttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    | |||||||||| |||||||||||||||||||||||||||    
T  16879984 tcttgtgatttcatcgtcttcgtgcgacgttggtttgttc 16879945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 16992142 - 16992078
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||| | ||  ||||||||| |||||||||| |||||||||||||||||||||||||||    
T  16992142 attttcacatttattttgttttttatcttgtgatttcatcgtcttcgtgcgacgttggtttgttc 16992078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 27024261 - 27024209
Alignment:
Q  306 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 358  Q
    |||||||||||||||| ||||||||||||||||| |||||||||| |||||||    
T  27024261 gggtgatttagggtcattttttgacccaaaatcacccctctaacttgtttttc 27024209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 307 - 359
Target Start/End: Complemental strand, 29812736 - 29812684
Alignment:
Q  307 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| |||||||    
T  29812736 ggtgatttagggtcaatttttgacacaaaatcacccctctaactcatttttct 29812684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 362 - 421
Target Start/End: Original strand, 38822145 - 38822202
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    |||||||||||| || ||||||  ||||||||||||||||||||||||||||||||||||    
T  38822145 attttcacatctatttcgtttt--attttgtgatttcgtcgtcttcgtgcgacgttggtt 38822202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 362 - 425
Target Start/End: Complemental strand, 9715588 - 9715525
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 425  Q
    |||||||||||| || ||||||||||||||||||||||||||||| || | |||||| ||||||    
T  9715588 attttcacatctatttcgttttttattttgtgatttcgtcgtcttagtacaacgttgatttgtt 9715525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 357
Target Start/End: Complemental strand, 9715667 - 9715616
Alignment:
Q  306 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 357  Q
    |||||||||||||||||||||||| ||||||||||| ||| |||||||||||    
T  9715667 gggtgatttagggtcaatttttgatccaaaatcatctctccaactcgttttt 9715616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 303 - 357
Target Start/End: Complemental strand, 19581128 - 19581074
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 357  Q
    |||||||||||| |||||||||||| || |||||||| |||||||||||||||||    
T  19581128 gaggggtgattttgggtcaatttttaacacaaaatcacccctctaactcgttttt 19581074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 426
Target Start/End: Complemental strand, 25237371 - 25237306
Alignment:
Q  361 tattttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||||||||| || |||||||| |||  ||||||||||||||| ||||||||||| |||||||    
T  25237371 tattttcacatctatttcgttttttctttcatgatttcgtcgtcttagtgcgacgttgttttgttc 25237306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 41842020 - 41842082
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| || ||||| ||  ||||||||||||||||||| |||||||||||||||||||    
T  41842020 attttcacatctatttcgtttctt--tttgtgatttcgtcgtcttagtgcgacgttggtttgttc 41842082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 246 - 345
Target Start/End: Original strand, 5754207 - 5754309
Alignment:
Q  246 ctctttctcttatctcattctcaaaccctagccgtcattcctttcttctt-ttc--atcggaggggtgatttagggtcaatttttgaccc-aaaatcatc 341  Q
    |||| |||||| ||||||||||||||||||||||||||   ||||||||| |||   |  |||||||||||||||||||| ||||||||| |||||||||    
T  5754207 ctctctctcttctctcattctcaaaccctagccgtcatcattttcttcttcttctttttagaggggtgatttagggtcaa-ttttgacccaaaaatcatc 5754305  T
Q  342 cctc 345  Q
    ||||    
T  5754306 cctc 5754309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 421
Target Start/End: Original strand, 6089963 - 6090020
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    |||||||||||| || ||||||  |||||||||||||||||||||||||||| |||||||    
T  6089963 attttcacatctatttcgtttt--attttgtgatttcgtcgtcttcgtgcgatgttggtt 6090020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 41797535 - 41797617
Alignment:
Q  241 tttttctctttctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttt 326  Q
    ||||||||  |||||| ||||||||||||||||||||||| |  ||||| ||||| |||   ||||||||||||||||| ||||||    
T  41797535 tttttctccctctcttctctcattctcaaaccctagccgttaccccttttttcttgtca---gaggggtgatttagggttaatttt 41797617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 426
Target Start/End: Original strand, 11931002 - 11931048
Alignment:
Q  380 ttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||||||    
T  11931002 ttttttattttgtgatttcatcgtcttagtgtgacgttggtttgttc 11931048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 361
Target Start/End: Original strand, 26491292 - 26491350
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 361  Q
    ||||||| ||||| | ||||||||||||||||||||| |||| |||||| |||||||||    
T  26491292 gaggggtaatttaagttcaatttttgacccaaaatcacccctttaactcatttttctat 26491350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 361
Target Start/End: Original strand, 36507924 - 36507978
Alignment:
Q  307 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 361  Q
    ||||| ||||||||||||||||||||||||||| | |||| |||| |||||||||    
T  36507924 ggtgacttagggtcaatttttgacccaaaatcacctctctgactcatttttctat 36507978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 364 - 425
Target Start/End: Original strand, 26491374 - 26491435
Alignment:
Q  364 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 425  Q
    |||||||||| || | |||||| ||| |||||||||||||||| ||||||||||| ||||||    
T  26491374 tttcacatctatttcattttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtt 26491435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 41841938 - 41841995
Alignment:
Q  303 gaggggtgatttagggtcaatttttgaccc-aaaatcatccctctaactcgtttttct 359  Q
    ||||| ||||||| |||||||||||||||| ||||||| |||| ||||||||||||||    
T  41841938 gagggttgatttatggtcaatttttgacccaaaaatcacccctttaactcgtttttct 41841995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 7443610 - 7443546
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| || |||||||  ||| ||||||||| |||||| ||||||||||| |||||||    
T  7443610 attttcacatctatttcgtttttgctttcgtgatttcgccgtcttagtgcgacgttgttttgttc 7443546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 25623089 - 25623025
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| ||  ||||||| ||| |||||||||||||||| ||||||| ||| |||||||    
T  25623089 attttcacatctattttgttttttctttcgtgatttcgtcgtcttagtgcgacattgttttgttc 25623025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 359
Target Start/End: Complemental strand, 25623170 - 25623114
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||||||||||||   ||||||||||||||||||||| || | ||||||||||||||    
T  25623170 gaggggtgatttattatcaatttttgacccaaaatcacccatataactcgtttttct 25623114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 425
Target Start/End: Original strand, 40125459 - 40125522
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 425  Q
    |||||||||||| ||  ||||||||||||||||||| ||| |||| |||| |||||| ||||||    
T  40125459 attttcacatctattttgttttttattttgtgattttgtcatcttagtgcaacgttgttttgtt 40125522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 426
Target Start/End: Original strand, 44951522 - 44951553
Alignment:
Q  395 tttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||||||||||||||||||||||||||||    
T  44951522 tttcgtcgtcttcgtgcgacgttggtttgttc 44951553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 392 - 426
Target Start/End: Complemental strand, 16720918 - 16720884
Alignment:
Q  392 tgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||||||||||| |||||||||||||||||||    
T  16720918 tgatttcgtcgtctttgtgcgacgttggtttgttc 16720884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 426
Target Start/End: Complemental strand, 42105794 - 42105732
Alignment:
Q  364 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||| ||  ||||||| |||||||||||||||||||| || | |||||| |||||||    
T  42105794 tttcacatctattttgttttttcttttgtgatttcgtcgtcttagtacaacgttgttttgttc 42105732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 425
Target Start/End: Complemental strand, 43929338 - 43929309
Alignment:
Q  396 ttcgtcgtcttcgtgcgacgttggtttgtt 425  Q
    ||||||||||||||||||||||||||||||    
T  43929338 ttcgtcgtcttcgtgcgacgttggtttgtt 43929309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 359
Target Start/End: Complemental strand, 5071495 - 5071439
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||||||| |||| |||||||||||||||  |||||| || ||||| ||||||||||    
T  5071495 gaggggtggtttatggtcaatttttgaccttaaatcacccttctaaatcgtttttct 5071439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 17037774 - 17037738
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatca 339  Q
    ||||||||||||  |||||||||||||||||||||||    
T  17037774 gaggggtgatttttggtcaatttttgacccaaaatca 17037738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 335
Target Start/End: Original strand, 19953373 - 19953405
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaa 335  Q
    ||||||||||||| |||||||||||||||||||    
T  19953373 gaggggtgatttatggtcaatttttgacccaaa 19953405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 418
Target Start/End: Original strand, 19953640 - 19953696
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 418  Q
    |||||||||||| || |||||||| ||| || ||||||||||||| || ||||||||    
T  19953640 attttcacatctatttcgttttttctttcgtaatttcgtcgtcttagtacgacgttg 19953696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 258 - 326
Target Start/End: Complemental strand, 34417063 - 34416995
Alignment:
Q  258 tctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttt 326  Q
    |||| ||||||||||||| |||||| |||||||| ||| |  |  ||||||||||||| ||||||||||    
T  34417063 tctccttctcaaaccctaaccgtcactcctttctacttctttttagaggggtgatttaaggtcaatttt 34416995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 35353641 - 35353677
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatca 339  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  35353641 gaggggtggtttagggtcaatttttgaccccaaatca 35353677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 381 - 425
Target Start/End: Original strand, 35353732 - 35353776
Alignment:
Q  381 tttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 425  Q
    ||||| ||| |||||||||||||||| ||||||||||| ||||||    
T  35353732 tttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtt 35353776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 37883723 - 37883787
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||| |||||| || |||||||| ||| ||| |||||| ||||| ||||||||||| |||||||    
T  37883723 attttaacatctatttcgttttttctttcgtggtttcgttgtcttagtgcgacgttgttttgttc 37883787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 4e-48; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 236 - 426
Target Start/End: Original strand, 19759710 - 19759922
Alignment:
Q  236 aagcctttttctctttctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaa 335  Q
    |||| |||||||||||||||| |||| ||||||||| || ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19759710 aagcatttttctctttctcttctctccttctcaaactcttgccgtcactcctttcttcttttcgtcggaggggtgatttagggtcaatttttgacccaaa 19759809  T
Q  336 atcatccctctaactcgtttttctat----------------------attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcga 413  Q
    |||| |||||||||||||||||||||                      |||||||||| ||||||||||||||||||||||||||||| |||||| ||||    
T  19759810 atcacccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatttgttacgttttttattttgtgatttcgtcatcttcgagcga 19759909  T
Q  414 cgttggtttgttc 426  Q
    |||||||||||||    
T  19759910 cgttggtttgttc 19759922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 23843468 - 23843404
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23843468 attttcacatcttttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 23843404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 13234152 - 13234088
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13234152 attttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 13234088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 362 - 421
Target Start/End: Original strand, 16913398 - 16913457
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  16913398 attttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 16913457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 303 - 358
Target Start/End: Original strand, 16913317 - 16913372
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 358  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  16913317 gaggggtgatttagggtcaatttttgacccgaaatcacccctctaactcgtttttc 16913372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 361
Target Start/End: Complemental strand, 12576603 - 12576545
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 361  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||    
T  12576603 gaggggtgatttagggtcaatttttgaccctaaatcacccctctaacttgtttttctat 12576545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 20845078 - 20845142
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| || |||||||||||||||||||| ||| |||||||||||| |||||||||||    
T  20845078 attttcacatctatttcgttttttattttgtgattttgtcatcttcgtgcgacattggtttgttc 20845142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 32457635 - 32457691
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||||||||||||| |||||||||||||||||||||| || ||||||||||||||||    
T  32457635 gaggggtgatttagcgtcaatttttgacccaaaatcacccatctaactcgtttttct 32457691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 364 - 422
Target Start/End: Original strand, 31748029 - 31748087
Alignment:
Q  364 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggttt 422  Q
    |||||||||| || |||||||||||||||||||||| |||||||||||||| |||||||    
T  31748029 tttcacatctatttcgttttttattttgtgatttcgacgtcttcgtgcgacattggttt 31748087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 380 - 426
Target Start/End: Original strand, 32457734 - 32457780
Alignment:
Q  380 ttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  32457734 ttttttattttgtgatttcgtcgtcttcgtgcgacgttgatttgttc 32457780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 303 - 359
Target Start/End: Complemental strand, 548990 - 548934
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||| ||||| || ||||||||||||||||||||||| |||||||||||||||||||    
T  548990 gaggagtgatataaggtcaatttttgacccaaaatcacccctctaactcgtttttct 548934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 378 - 426
Target Start/End: Complemental strand, 15128181 - 15128133
Alignment:
Q  378 cgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  15128181 cgtttttaattttgtgatttcgtcgtcttagtgcgacgttggtttgttc 15128133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 357
Target Start/End: Original strand, 32804286 - 32804337
Alignment:
Q  306 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 357  Q
    |||||||||||||||||||||||||||||||||| || |||||||| |||||    
T  32804286 gggtgatttagggtcaatttttgacccaaaatcacccatctaactcattttt 32804337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 303 - 357
Target Start/End: Complemental strand, 4663945 - 4663891
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 357  Q
    |||||||||||  |||||||||||||||||||||||| ||||||||| |||||||    
T  4663945 gaggggtgattgtgggtcaatttttgacccaaaatcacccctctaacacgttttt 4663891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 317 - 359
Target Start/End: Original strand, 20845011 - 20845053
Alignment:
Q  317 ggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  20845011 ggtcaatttttgacccaaaatcacccctctaactcgtttttct 20845053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 426
Target Start/End: Complemental strand, 5417223 - 5417178
Alignment:
Q  381 tttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||    
T  5417223 ttttcattttgtgatttcgtcgtctttgtgcgacgttggtttgttc 5417178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 426
Target Start/End: Original strand, 33194674 - 33194739
Alignment:
Q  361 tattttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||||||||| ||  ||||||||||||||||||||||||| || ||| || ||||||||||||    
T  33194674 tattttcacatctattttgttttttattttgtgatttcgtcgtgttagtgtgatgttggtttgttc 33194739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 359
Target Start/End: Complemental strand, 13234232 - 13234177
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||||||||||||||||||||||||||| ||||||| || ||||| ||||||||||    
T  13234232 gaggggtgatttagggtcaatttttgacctaaaatca-ccttctaattcgtttttct 13234177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 32804365 - 32804429
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| ||  |||||||||||||||||||| ||||||| ||| || ||||||||||||    
T  32804365 attttcacatcttttttgttttttattttgtgatttcatcgtcttagtgagatgttggtttgttc 32804429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 382 - 421
Target Start/End: Complemental strand, 8633215 - 8633176
Alignment:
Q  382 ttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  8633215 ttttattttgtgatttcgtcgttttcgtgcgacgttggtt 8633176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 357
Target Start/End: Original strand, 10744571 - 10744622
Alignment:
Q  306 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 357  Q
    ||||||||||||||||| ||||||||||||||||  ||||||||| ||||||    
T  10744571 gggtgatttagggtcaacttttgacccaaaatcactcctctaacttgttttt 10744622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 359
Target Start/End: Complemental strand, 15128260 - 15128218
Alignment:
Q  317 ggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||||||||||| |||||||||| |||||||||||||||||||    
T  15128260 ggtcaatttttgtcccaaaatcacccctctaactcgtttttct 15128218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 426
Target Start/End: Original strand, 32574446 - 32574570
Alignment:
Q  307 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat------attttcacatctgttacgttttttattttgtgatttcgt 400  Q
    |||| ||||| |||||||||||||||||||| | |||||||||||| |||||| |      ||||| | |||| || |  |||||||||| |||||||||    
T  32574446 ggtgttttagagtcaatttttgacccaaaattaaccctctaactcgcttttctctttcccgatttttaaatctatttcactttttatttt-tgatttcgt 32574544  T
Q  401 cgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||  ||||| ||||||||||||    
T  32574545 cgtcttaatgcgatgttggtttgttc 32574570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 381 - 426
Target Start/End: Complemental strand, 548891 - 548846
Alignment:
Q  381 tttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||||||||| |||||||||||| | ||||||||||||    
T  548891 tttttattttgtgatttcatcgtcttcgtgcaatgttggtttgttc 548846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 307 - 359
Target Start/End: Original strand, 891581 - 891633
Alignment:
Q  307 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||||| |||||| |||||||||||||||| | |||| ||||||||||||||    
T  891581 ggtgattaagggtcgatttttgacccaaaattacccctataactcgtttttct 891633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 421
Target Start/End: Original strand, 11426014 - 11426071
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    |||||||||||| || ||||||  |||||||||||||||| ||||||||||| |||||||    
T  11426014 attttcacatctatttcgtttt--attttgtgatttcgtcatcttcgtgcgatgttggtt 11426071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 414
Target Start/End: Original strand, 31804318 - 31804370
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgac 414  Q
    |||||||||||| || |||||||| ||| |||||||||||||||| |||||||    
T  31804318 attttcacatctatttcgttttttctttcgtgatttcgtcgtcttagtgcgac 31804370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 307 - 359
Target Start/End: Original strand, 33194598 - 33194650
Alignment:
Q  307 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||||||||||||||||||||| |||||||||   |||||| ||||||||||    
T  33194598 ggtgatttagggtcaatttttgatccaaaatcacatctctaattcgtttttct 33194650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 34020607 - 34020651
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctcta 347  Q
    |||||||| ||||||||||||||||||||||| ||||||| ||||    
T  34020607 gaggggtggtttagggtcaatttttgacccaacatcatccatcta 34020651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 433
Target Start/End: Complemental strand, 4663864 - 4663793
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcttcatct 433  Q
    ||||||||| || || |||| |||  ||||||||||||||||||| ||||||||||  ||||||| ||||||    
T  4663864 attttcacaactatttcgttgttttctttgtgatttcgtcgtcttagtgcgacgttattttgttcgtcatct 4663793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 422
Target Start/End: Original strand, 7049332 - 7049375
Alignment:
Q  379 gttttttattttgtgatttcgtcgtcttcgtgcgacgttggttt 422  Q
    ||||||| ||||||||||| ||| ||||||||||||||||||||    
T  7049332 gttttttgttttgtgattttgtcatcttcgtgcgacgttggttt 7049375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 345
Target Start/End: Original strand, 7049236 - 7049278
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctc 345  Q
    |||||||||||||||||||| ||||||| |||||||| |||||    
T  7049236 gaggggtgatttagggtcaacttttgactcaaaatcacccctc 7049278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 295
Target Start/End: Original strand, 1302647 - 1302696
Alignment:
Q  246 ctctttctcttatctcattctcaaaccctagccgtcattcctttcttctt 295  Q
    |||| |||||| |||| ||||||||||||||||||||  |||||||||||    
T  1302647 ctctctctcttttctccttctcaaaccctagccgtcacccctttcttctt 1302696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 339
Target Start/End: Original strand, 8644237 - 8644270
Alignment:
Q  306 gggtgatttagggtcaatttttgacccaaaatca 339  Q
    |||||||||||||||||||||||||| |||||||    
T  8644237 gggtgatttagggtcaatttttgaccaaaaatca 8644270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 426
Target Start/End: Original strand, 10744672 - 10744717
Alignment:
Q  381 tttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||| |||||||||||||||||||| ||||||| ||| |||||||    
T  10744672 ttttttttttgtgatttcgtcgtcttagtgcgaccttgttttgttc 10744717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 421
Target Start/End: Complemental strand, 12576522 - 12576465
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    |||||||||||| || ||||||  ||||||||||| ||||||||| ||| ||||||||||    
T  12576522 attttcacatctatttcgtttt--attttgtgattccgtcgtctttgtgtgacgttggtt 12576465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 86; Significance: 6e-41; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 236 - 426
Target Start/End: Complemental strand, 5718 - 5506
Alignment:
Q  236 aagcctttttctctttctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaa 335  Q
    ||||||||||||||||||||| ||||||||||||||  ||||| ||| | |||||||||||||||||||| ||| |||||||||||||||||||| ||||    
T  5718 aagcctttttctctttctcttctctcattctcaaactttagccatcacttctttcttcttttcatcggagaggttatttagggtcaatttttgactcaaa 5619  T
Q  336 atcatccctctaactcgtttttctat----------------------attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcga 413  Q
    ||   |||| ||||||||||||||||                      |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  5618 attgcccctttaactcgtttttctatttctcttttattgaaataagtgattttcacatctgttatgttttttattttgtgatttcgtcgtcttcgtgcga 5519  T
Q  414 cgttggtttgttc 426  Q
    |||||||||||||    
T  5518 cgttggtttgttc 5506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 6e-41; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 236 - 361
Target Start/End: Original strand, 21326395 - 21326520
Alignment:
Q  236 aagcctttttctctttctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaa 335  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||| | ||||||||||||| | |||||||||||||||| ||||||||||| | |||    
T  21326395 aagcctttttctctttctcttctctctttctcaaaccctagccgtcacttctttcttcttttcgttggaggggtgatttaggatcaatttttgaacaaaa 21326494  T
Q  336 atcatccctctaactcgtttttctat 361  Q
    |||| |||||||||||||||||||||    
T  21326495 atcacccctctaactcgtttttctat 21326520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 294 - 426
Target Start/End: Complemental strand, 44562883 - 44562729
Alignment:
Q  294 ttttcatcggaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat----------------------attttcacat 371  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||                      ||||||||||    
T  44562883 ttttcgtcggatgggtgatttagggtcaatttttgacccaaaatcacccctctaactcgtttttctatttcccttttattgaaataagtgattttcacat 44562784  T
Q  372 ctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  44562783 ctgttacgttttatattttgtgatttcgtcatcttcgtgcgacgttggtttgttc 44562729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 23320510 - 23320574
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23320510 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgtgacgttggtttgttc 23320574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 5832164 - 5832280
Alignment:
Q  251 tctcttatctcattctcaaaccctagccgtcattcctttcttctt------ttcatcggaggggtgatttagggtcaatttttgacccaaaatcatccct 344  Q
    |||||| |||| |||| ||||||||||||||| ||||||||||||      ||  |  |||||||||||||||||||||||||||||| |||||| ||||    
T  5832164 tctcttctctccttcttaaaccctagccgtcactcctttcttcttcttctttttgtaagaggggtgatttagggtcaatttttgaccctaaatcacccct 5832263  T
Q  345 ctaactcgtttttctat 361  Q
    |||||||||||||||||    
T  5832264 ctaactcgtttttctat 5832280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 22344956 - 22344892
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22344956 attttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 22344892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 364 - 421
Target Start/End: Original strand, 4564589 - 4564646
Alignment:
Q  364 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  4564589 tttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 4564646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 15276494 - 15276430
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| ||  ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15276494 attttcacatctattttgttttttattttgtgatttcgtcgttttcgtgcgacgttggtttgttc 15276430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 362 - 421
Target Start/End: Original strand, 1768036 - 1768095
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||    
T  1768036 attttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtgtgacgttggtt 1768095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 357
Target Start/End: Original strand, 52839412 - 52839466
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 357  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  52839412 gaggggtgatttagggtcaatttttgacccaaaatcacccttctaactcgttttt 52839466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 630829 - 630764
Alignment:
Q  362 attttcacatctgttacgtttttt-attttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| || |||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  630829 attttcacatctatttcgtttttttattttgtgatttcgtcgtcttcttgcgacgttggtttgttc 630764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 361
Target Start/End: Complemental strand, 630909 - 630852
Alignment:
Q  304 aggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 361  Q
    ||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||    
T  630909 aggggtgatttagggtcaatttttgaccctaaatcacccatctaactcgtttttctat 630852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 5832303 - 5832368
Alignment:
Q  362 attttcacatctgttacgtttt-ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| || |||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  5832303 attttcacatctatttcgtttttttattttgtgatttcgtcgtcttcttgcgacgttggtttgttc 5832368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 238 - 361
Target Start/End: Original strand, 23320376 - 23320487
Alignment:
Q  238 gcctttttctctttctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaat 337  Q
    ||||||||||||||||||| |||| |||||||||||||| ||||| |||||||||||||||           | || |||||  ||||||||||||||||    
T  23320376 gcctttttctctttctcttctctccttctcaaaccctagtcgtcactcctttcttcttttc-----------gtttgagggt-gatttttgacccaaaat 23320463  T
Q  338 catccctctaactcgtttttctat 361  Q
    || |||||||||||||||||||||    
T  23320464 cacccctctaactcgtttttctat 23320487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 361 - 426
Target Start/End: Complemental strand, 27469753 - 27469688
Alignment:
Q  361 tattttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||||||||| || |||||||| |||||||||||||||||||| ||||||||||| |||||||    
T  27469753 tattttcacatctatttcgttttttcttttgtgatttcgtcgtcttagtgcgacgttgttttgttc 27469688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 17579757 - 17579813
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||    
T  17579757 gaggggtgacttagggtcaatttttgaaccaaaatcatccctctaactcatttttct 17579813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 21326543 - 21326607
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||||||||||| |||||||||||||  |||||||||||||||||| ||| |||||||||||    
T  21326543 attttcacatctgttgcgttttttattttacgatttcgtcgtcttcgtgtgacattggtttgttc 21326607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 38646654 - 38646718
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||| |||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||    
T  38646654 attttaacatctatttcattttttattttgtgattttgtcgtcttcgtgcgacgttggtttgttc 38646718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 303 - 358
Target Start/End: Complemental strand, 6213011 - 6212956
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 358  Q
    ||||||||||||| |||||||||||||||||||||||  |||||||||||||||||    
T  6213011 gaggggtgatttatggtcaatttttgacccaaaatcacacctctaactcgtttttc 6212956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 362 - 421
Target Start/End: Original strand, 15698270 - 15698329
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    |||||||||||| || ||||||||||||||||||||||||||||| ||| ||||||||||    
T  15698270 attttcacatctatttcgttttttattttgtgatttcgtcgtctttgtgtgacgttggtt 15698329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 303 - 358
Target Start/End: Complemental strand, 22345037 - 22344982
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 358  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||    
T  22345037 gaggggtgatttaggttcaatttttgacccaaaatcacccctctaacttgtttttc 22344982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 362 - 425
Target Start/End: Complemental strand, 40488441 - 40488378
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 425  Q
    |||||||||||| || |||||||| |||||||||||||||||||| ||||||||||| ||||||    
T  40488441 attttcacatctatttcgttttttcttttgtgatttcgtcgtcttagtgcgacgttgttttgtt 40488378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 362 - 421
Target Start/End: Original strand, 45659112 - 45659171
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    |||||||||||| || | ||||||||||||||||||||||||||| ||||||||||||||    
T  45659112 attttcacatctatttcattttttattttgtgatttcgtcgtctttgtgcgacgttggtt 45659171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 305 - 359
Target Start/End: Complemental strand, 13691881 - 13691827
Alignment:
Q  305 ggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||||| |||||||||||||||||||||||||||| |||||||| ||||||||||    
T  13691881 ggggtggtttagggtcaatttttgacccaaaatcacccctctaaatcgtttttct 13691827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 364 - 425
Target Start/End: Original strand, 36621424 - 36621485
Alignment:
Q  364 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 425  Q
    |||||||||| || |||||||| ||||||||||| |||||||||||||| ||||||||||||    
T  36621424 tttcacatctatttcgttttttgttttgtgattttgtcgtcttcgtgcggcgttggtttgtt 36621485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 23257158 - 23257222
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||| | ||  ||||||||| |||||||||| |||||||||||||||||||||||||||    
T  23257158 attttcacatttattttgttttttatcttgtgatttcatcgtcttcgtgcgacgttggtttgttc 23257222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 378 - 426
Target Start/End: Complemental strand, 38644825 - 38644777
Alignment:
Q  378 cgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  38644825 cgttttttattttgtgatttcttcgtcttcgtgcgacattggtttgttc 38644777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 362 - 418
Target Start/End: Original strand, 40992406 - 40992462
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 418  Q
    |||||||||| | || |||||||||||||||||||||||| ||||||||||||||||    
T  40992406 attttcacatttatttcgttttttattttgtgatttcgtcatcttcgtgcgacgttg 40992462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 364 - 426
Target Start/End: Original strand, 28213120 - 28213182
Alignment:
Q  364 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||| || |||||||||||||||||||| |||||||| ||||| |||| ||||||||    
T  28213120 tttcacatctatttcgttttttattttgtgattttgtcgtctttgtgcggcgttagtttgttc 28213182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 303 - 357
Target Start/End: Complemental strand, 44514115 - 44514061
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 357  Q
    ||||||||||||||||||||||||||||||||||||| | || ||||| ||||||    
T  44514115 gaggggtgatttagggtcaatttttgacccaaaatcacctctttaacttgttttt 44514061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 380 - 426
Target Start/End: Original strand, 49651932 - 49651978
Alignment:
Q  380 ttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  49651932 ttttttattttgtgatttcgtcgtcttcgtgtgacgttcgtttgttc 49651978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 303 - 357
Target Start/End: Original strand, 52839510 - 52839564
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 357  Q
    ||||||||||||| | ||||||||||||||||||||| || ||||||||||||||    
T  52839510 gaggggtgatttatgatcaatttttgacccaaaatcacccttctaactcgttttt 52839564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 362 - 411
Target Start/End: Original strand, 900192 - 900241
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgc 411  Q
    |||||||||||| || ||||||||||||||||||||||||||||| ||||    
T  900192 attttcacatctatttcgttttttattttgtgatttcgtcgtctttgtgc 900241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 365 - 426
Target Start/End: Original strand, 52752096 - 52752157
Alignment:
Q  365 ttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||||| ||  ||||||||||||||||||| ||||||||||| |||| |||||||||||    
T  52752096 ttcacatctattttgttttttattttgtgattttgtcgtcttcgtacgacattggtttgttc 52752157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 359
Target Start/End: Complemental strand, 14717367 - 14717312
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||||||||||||||||||||||||||  ||| ||| |||||||||||||||||||    
T  14717367 gaggggtgatttagggtcaatttttgacttaaattca-ccctctaactcgtttttct 14717312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 32539234 - 32539170
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||| ||||| ||  ||||||||||||||||||| |||||||| || ||||||||||||||||    
T  32539234 attttcgcatctattttgttttttattttgtgattttgtcgtcttagtacgacgttggtttgttc 32539170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 38646573 - 38646629
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||| |||||||| ||||||||||||||||||||||| || | ||||||||||||||    
T  38646573 gaggagtgatttatggtcaatttttgacccaaaatcacccatgtaactcgtttttct 38646629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 362 - 433
Target Start/End: Original strand, 52839600 - 52839671
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcttcatct 433  Q
    |||||||||| | || |||||||| ||| ||||||| |||||||| ||||||||||| ||||||| ||||||    
T  52839600 attttcacatttatttcgttttttctttcgtgattttgtcgtcttagtgcgacgttgttttgttcgtcatct 52839671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 362 - 424
Target Start/End: Complemental strand, 35077934 - 35077872
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgt 424  Q
    |||||||||||| || |||||||| ||| |||||||||||||||| || |||||||| |||||    
T  35077934 attttcacatctatttcgttttttctttcgtgatttcgtcgtcttagtacgacgttgttttgt 35077872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 359
Target Start/End: Original strand, 45659041 - 45659087
Alignment:
Q  313 ttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||||||||||||||||||||||||||   |||||||||||||||||    
T  45659041 ttagggtcaatttttgacccaaaatcactgctctaactcgtttttct 45659087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 381 - 426
Target Start/End: Complemental strand, 12967757 - 12967712
Alignment:
Q  381 tttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||||||| |||| || |||||||||||||||||||||    
T  12967757 tttttattttgtgattccgtcatcatcgtgcgacgttggtttgttc 12967712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 362 - 418
Target Start/End: Complemental strand, 14717287 - 14717230
Alignment:
Q  362 attttcacatctgttacgttttttatttt-gtgatttcgtcgtcttcgtgcgacgttg 418  Q
    |||||||||||| ||  |||||||||||| |||||||||||||||| |||||||||||    
T  14717287 attttcacatctattttgttttttatttttgtgatttcgtcgtctttgtgcgacgttg 14717230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 356
Target Start/End: Original strand, 46589165 - 46589217
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttt 356  Q
    ||||||||||||| | |||||||||||| |||||||| ||||||||||||||||    
T  46589165 gaggggtgatttatgatcaatttttgactcaaaatca-ccctctaactcgtttt 46589217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 315 - 359
Target Start/End: Original strand, 8893294 - 8893338
Alignment:
Q  315 agggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||| ||||||||||||||||||| || ||||||||||||||||    
T  8893294 agggttaatttttgacccaaaatcacccttctaactcgtttttct 8893338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 10877416 - 10877480
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||| |||| || |||||||| ||| ||||||||||| |||| ||||||||||| |||||||    
T  10877416 attttcatatctatttcgttttttctttcgtgatttcgtcatcttagtgcgacgttgttttgttc 10877480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 326
Target Start/End: Complemental strand, 15791675 - 15791607
Alignment:
Q  258 tctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttt 326  Q
    |||| |||||||||||||| ||||||  |||||||||| |  |||||||| ||||||||| ||||||||    
T  15791675 tctccttctcaaaccctagtcgtcatctctttcttcttcttgtcggagggctgatttaggatcaatttt 15791607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 51417928 - 51417972
Alignment:
Q  251 tctcttatctcattctcaaaccctagccgtcattcctttcttctt 295  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||||    
T  51417928 tctcttatctccttctcaaaccctaaccgtcatccctttcttctt 51417972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 357
Target Start/End: Complemental strand, 33177722 - 33177667
Alignment:
Q  302 ggaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 357  Q
    |||||||||||||| ||  |||||||||| ||||||||||| |||||||| |||||    
T  33177722 ggaggggtgatttatggctaatttttgactcaaaatcatccatctaactccttttt 33177667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 339
Target Start/End: Complemental strand, 48655190 - 48655155
Alignment:
Q  304 aggggtgatttagggtcaatttttgacccaaaatca 339  Q
    ||||||||||||| ||||||||||||||||||||||    
T  48655190 aggggtgatttagagtcaatttttgacccaaaatca 48655155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 361
Target Start/End: Complemental strand, 12148169 - 12148115
Alignment:
Q  307 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 361  Q
    |||||||||| |||| ||||||||||||||  | | |||||||||||||||||||    
T  12148169 ggtgatttagcgtcagtttttgacccaaaaataccactctaactcgtttttctat 12148115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 22032215 - 22032169
Alignment:
Q  303 gaggggtgatttagggtcaatttttgaccc-aaaatcatccctctaa 348  Q
    ||||| |||||||||||||||||||||||| ||||||| ||||||||    
T  22032215 gagggatgatttagggtcaatttttgacccaaaaatcacccctctaa 22032169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 359
Target Start/End: Complemental strand, 35078009 - 35077959
Alignment:
Q  309 tgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||||| | |||| |||||||||||||||| | |||||||||||||||||    
T  35078009 tgatttatgatcaaattttgacccaaaatcacctctctaactcgtttttct 35077959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 356
Target Start/End: Complemental strand, 37685206 - 37685168
Alignment:
Q  318 gtcaatttttgacccaaaatcatccctctaactcgtttt 356  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  37685206 gtcaatttttgacccaaaatcaatcctctaactcgtttt 37685168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 356
Target Start/End: Original strand, 37700312 - 37700350
Alignment:
Q  318 gtcaatttttgacccaaaatcatccctctaactcgtttt 356  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  37700312 gtcaatttttgacccaaaatcaatcctctaactcgtttt 37700350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 343
Target Start/End: Original strand, 8937612 - 8937648
Alignment:
Q  306 gggtgatttagggtcaatttttgacccaaaatcatccc 343  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  8937612 gggtgatttagggtcaa-ttttgacccaaaatcatccc 8937648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 359
Target Start/End: Original strand, 10877338 - 10877391
Alignment:
Q  307 ggtgatttagggtcaatttttg-acccaaaatcatccctctaactcgtttttct 359  Q
    ||||||||| |||||||||||  |||||||||||  ||||||||||||||||||    
T  10877338 ggtgatttatggtcaatttttttacccaaaatcacacctctaactcgtttttct 10877391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 295
Target Start/End: Complemental strand, 28678344 - 28678295
Alignment:
Q  246 ctctttctcttatctcattctcaaaccctagccgtcattcctttcttctt 295  Q
    |||| |||||| |||| ||||||||||||||||||||  |||||||||||    
T  28678344 ctctctctcttctctccttctcaaaccctagccgtcacccctttcttctt 28678295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 32784047 - 32784119
Alignment:
Q  263 ttctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaa 336  Q
    ||||||||||| ||| ||||  ||||||||||| |  ||  ||||||||||||||||||| |||||||||||||    
T  32784047 ttctcaaaccccagctgtcacccctttcttcttcttttcaaaggggtgatttagggtcaa-ttttgacccaaaa 32784119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 414
Target Start/End: Complemental strand, 6212930 - 6212878
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgac 414  Q
    |||||||||||| |   ||||||||||||| |||||||||||||| |||||||    
T  6212930 attttcacatctatcttgttttttattttgggatttcgtcgtctttgtgcgac 6212878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 37825518 - 37825474
Alignment:
Q  251 tctcttatctcattctcaaaccctagccgtcattcctttcttctt 295  Q
    |||||| |||| |||||||||||||||||||| || |||||||||    
T  37825518 tctcttctctccttctcaaaccctagccgtcactcttttcttctt 37825474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 265 - 345
Target Start/End: Original strand, 42276298 - 42276377
Alignment:
Q  265 ctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaatcatccctc 345  Q
    |||||||||||| |||||  | ||||||||| |  || |||||||||||||||||  ||||||||| |||||||| |||||    
T  42276298 ctcaaaccctagtcgtcacccttttcttcttcttttcagaggggtgatttagggt-tatttttgacacaaaatcacccctc 42276377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 4e-36; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 263 - 433
Target Start/End: Complemental strand, 43807315 - 43807123
Alignment:
Q  263 ttctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat- 361  Q
    |||||||||||||||| ||| || |||||||||||| |||||| ||||||||| ||||||||||||||||||||||| | |||||||||||||||||||     
T  43807315 ttctcaaaccctagccatcactcttttcttcttttcgtcggagaggtgatttatggtcaatttttgacccaaaatcacctctctaactcgtttttctatt 43807216  T
Q  362 ---------------------attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcttcatct 433  Q
                         ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  43807215 tctcttttattaaaataagcaattttcacatctgttacgtattttattttgtgatttcgtcgtcttcgtgcgatgttggtttgttcgtcatct 43807123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 245 - 426
Target Start/End: Complemental strand, 30993008 - 30992803
Alignment:
Q  245 tctctttctcttatctcattctc--aaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaatcatcc 342  Q
    |||||||||||| |||| |||||  |||||||| | |||| | ||||||||||||| |||||||||||||||| ||| ||||||||||||||||||| ||    
T  30993008 tctctttctcttctctccttctctcaaaccctacctgtcacttctttcttcttttcgtcggaggggtgatttaaggttaatttttgacccaaaatcaccc 30992909  T
Q  343 ctctaactcgtttttctat----------------------attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggt 420  Q
    |||||||| ||||||||||                      |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |    
T  30992908 ctctaacttgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgattttgtcgtcttcgtgcgacgttgat 30992809  T
Q  421 ttgttc 426  Q
    ||||||    
T  30992808 ttgttc 30992803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 26017702 - 26017638
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26017702 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgatgttggtttgttc 26017638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 362 - 433
Target Start/End: Complemental strand, 23732437 - 23732366
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcttcatct 433  Q
    |||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23732437 attttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcatct 23732366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 40775337 - 40775401
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40775337 attttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 40775401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 47749804 - 47749868
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  47749804 attttcacatctatttcgttttttattttgtgatttcgttgtcttcgtgcgacgttggtttgttc 47749868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 303 - 361
Target Start/End: Original strand, 24470384 - 24470442
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 361  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  24470384 gaggggtgatttaggggcaatttttgacccaaaatcacccctctaactcgtttttctat 24470442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 303 - 361
Target Start/End: Original strand, 24475332 - 24475390
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 361  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  24475332 gaggggtgatttaggggcaatttttgacccaaaatcacccctctaactcgtttttctat 24475390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 306 - 359
Target Start/End: Complemental strand, 25855342 - 25855289
Alignment:
Q  306 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  25855342 gggtgatttagggtcaatttttgatccaaaatcatccctctaactcgtttttct 25855289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 135189 - 135125
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| || | |||| ||||||||||||||||||||||||||||||||||||||||||    
T  135189 attttcacatctatttcattttgtattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 135125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 25855264 - 25855200
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||| |||| || |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25855264 attttcatatctatttcgttttttattttgtgattttgtcgtcttcgtgcgacgttggtttgttc 25855200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 364 - 421
Target Start/End: Complemental strand, 8611665 - 8611608
Alignment:
Q  364 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    |||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||    
T  8611665 tttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 8611608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 364 - 421
Target Start/End: Original strand, 49166998 - 49167055
Alignment:
Q  364 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    |||||||||| || |||||||||||| |||||||||||||||||||||||||||||||    
T  49166998 tttcacatctatttcgttttttatttcgtgatttcgtcgtcttcgtgcgacgttggtt 49167055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 13008717 - 13008653
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| ||  ||||||||||||||||||| |||||||| |||||||||||||||||||    
T  13008717 attttcacatctattttgttttttattttgtgattttgtcgtcttagtgcgacgttggtttgttc 13008653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 47749723 - 47749779
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||    
T  47749723 gaggggtgatttatggtcaatttttgacccaaaatcacccctctatctcgtttttct 47749779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 303 - 358
Target Start/End: Original strand, 40775256 - 40775311
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 358  Q
    ||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||    
T  40775256 gaggggtgatttagggtcaatttttgatccaaaatcacccctataactcgtttttc 40775311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 363 - 426
Target Start/End: Original strand, 42490774 - 42490837
Alignment:
Q  363 ttttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||||||| || |||| |||||||||||||||| ||||||||||| |||||||||||||||    
T  42490774 ttttcacatctatttcgttctttattttgtgatttcatcgtcttcgtgtgacgttggtttgttc 42490837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 306 - 361
Target Start/End: Original strand, 49166919 - 49166974
Alignment:
Q  306 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 361  Q
    |||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||    
T  49166919 gggtgatttagggtcaatttttgacctaaaatcacccctctaacttgtttttctat 49166974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 305 - 359
Target Start/End: Original strand, 7985883 - 7985937
Alignment:
Q  305 ggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||||||||||||||||| |||||||| |||| ||||||||||||||||||||||    
T  7985883 ggggtgatttagggtcaacttttgacctaaaaccatccctctaactcgtttttct 7985937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 361
Target Start/End: Complemental strand, 8611747 - 8611689
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 361  Q
    ||||||||||||||||||  |||||||||||| |||| |||||||||||||||||||||    
T  8611747 gaggggtgatttagggtctctttttgacccaatatcacccctctaactcgtttttctat 8611689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 357
Target Start/End: Original strand, 28015345 - 28015399
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 357  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||    
T  28015345 gaggggtgatttagggtcaatttttgatccaaaatcacccctctaacttgttttt 28015399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 380 - 422
Target Start/End: Original strand, 35661612 - 35661654
Alignment:
Q  380 ttttttattttgtgatttcgtcgtcttcgtgcgacgttggttt 422  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  35661612 ttttttattttgtgatttcgtcgtcttcgtgcgacgttggttt 35661654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 364 - 421
Target Start/End: Original strand, 24475414 - 24475471
Alignment:
Q  364 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    |||||||||| || |||||||||||||||||||||||||||  |||||||||||||||    
T  24475414 tttcacatctatttcgttttttattttgtgatttcgtcgtccacgtgcgacgttggtt 24475471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 364 - 421
Target Start/End: Original strand, 40476780 - 40476837
Alignment:
Q  364 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    |||||||||| || |||||||||||||||||||||||||||||||| | |||||||||    
T  40476780 tttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtacaacgttggtt 40476837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 306 - 355
Target Start/End: Original strand, 47156388 - 47156437
Alignment:
Q  306 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttt 355  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  47156388 gggtgatttaaggtcaatttttgatccaaaatcatccctctaactcgttt 47156437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 7985962 - 7986026
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| || | |||| ||||||||||||||||| |||||||| |||||||||||||||    
T  7985962 attttcacatctatttcattttgtattttgtgatttcgtcatcttcgtgtgacgttggtttgttc 7986026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 8319385 - 8319449
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||| | ||  ||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  8319385 attttcacatatatttagttttttattttgtgattttgtcgtcttcgtacgacgttggtttgttc 8319449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 303 - 359
Target Start/End: Complemental strand, 29804801 - 29804745
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||||||| ||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  29804801 gaggggtggtttagggtcaatttttgaccccaaatcacccctctaaatcgtttttct 29804745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 303 - 357
Target Start/End: Original strand, 43483583 - 43483637
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 357  Q
    |||| |||||||||||||||||||||| | |||||||||||||||||| ||||||    
T  43483583 gaggagtgatttagggtcaatttttgatctaaaatcatccctctaacttgttttt 43483637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 364 - 421
Target Start/End: Original strand, 24470466 - 24470523
Alignment:
Q  364 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    |||||||||| || ||||||||||||||||||||| |||||  |||||||||||||||    
T  24470466 tttcacatctatttcgttttttattttgtgatttcatcgtcaacgtgcgacgttggtt 24470523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 306 - 359
Target Start/End: Original strand, 44681454 - 44681506
Alignment:
Q  306 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||||||||||||    
T  44681454 gggtgatttaggttcaatttttgacctaaaatca-ccctctaactcgtttttct 44681506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 9933917 - 9933981
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||| |||||| || |||||||| ||||||||||||| |||||| ||||||||||| |||||||    
T  9933917 atttttacatctatttcgttttttcttttgtgatttcgccgtcttagtgcgacgttgttttgttc 9933981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 246 - 326
Target Start/End: Original strand, 21990583 - 21990663
Alignment:
Q  246 ctctttctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttt 326  Q
    |||| |||||| |||| ||||||||||||||||||||  |||||||  || |  || ||||||||||||||||||||||||    
T  21990583 ctctctctcttctctccttctcaaaccctagccgtcacccctttctctttcttttcagaggggtgatttagggtcaatttt 21990663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 359
Target Start/End: Complemental strand, 23732518 - 23732462
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||||||||||| |||||||||||||| ||||||||   |||||||||||||||||    
T  23732518 gaggggtgatttaaggtcaatttttgactcaaaatcacttctctaactcgtttttct 23732462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 422
Target Start/End: Complemental strand, 35141795 - 35141735
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggttt 422  Q
    |||||||||||| || | ||||||||||||||||| ||||||||| |||||||||| ||||    
T  35141795 attttcacatctatttcattttttattttgtgattccgtcgtcttagtgcgacgttagttt 35141735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 348
Target Start/End: Complemental strand, 38649482 - 38649438
Alignment:
Q  304 aggggtgatttagggtcaatttttgacccaaaatcatccctctaa 348  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||    
T  38649482 aggggtgatttagagtcaatttttgacccaaaatcacccctctaa 38649438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 43483670 - 43483734
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| || |||||||  ||||||||||||| |||||| ||||||||||| |||||||    
T  43483670 attttcacatctatttcgtttttgcttttgtgatttcgccgtcttagtgcgacgttgttttgttc 43483734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 421
Target Start/End: Original strand, 47156464 - 47156521
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    |||||||||||| || ||||||  ||||||||||||||||||||||||| ||||||||||    
T  47156464 attttcacatctatttcgtttt--attttgtgatttcgtcgtcttcgtgtgacgttggtt 47156521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 382 - 421
Target Start/End: Original strand, 11001934 - 11001973
Alignment:
Q  382 ttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  11001934 ttttattttgtgatttcgtcgtcttcgtgagacgttggtt 11001973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 303 - 358
Target Start/End: Original strand, 16263376 - 16263431
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 358  Q
    ||||||||||||||| ||||||||||| ||||||||| | |||||||| |||||||    
T  16263376 gaggggtgatttaggatcaatttttgatccaaaatcacctctctaacttgtttttc 16263431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 357
Target Start/End: Complemental strand, 35141875 - 35141824
Alignment:
Q  306 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 357  Q
    |||||||||||||||||||||||||| ||||||| || |||||||| |||||    
T  35141875 gggtgatttagggtcaatttttgaccaaaaatcacccttctaactcattttt 35141824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 251 - 336
Target Start/End: Original strand, 40761519 - 40761600
Alignment:
Q  251 tctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaa 336  Q
    |||||| |||| ||| |||||||||||||||   |||||||||||||||   ||||| |||||||||||||| |||||||||||||    
T  40761519 tctcttctctccttcccaaaccctagccgtcgcccctttcttcttttca---gagggatgatttagggtcaa-ttttgacccaaaa 40761600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 362 - 425
Target Start/End: Original strand, 46918470 - 46918533
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 425  Q
    |||||||||||| ||  ||||||||||||||||||||||| |||| |||| || ||||||||||    
T  46918470 attttcacatctattttgttttttattttgtgatttcgtcatctttgtgcaacattggtttgtt 46918533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 326
Target Start/End: Complemental strand, 28665105 - 28665031
Alignment:
Q  252 ctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttt 326  Q
    ||||| |||||||||||||||||  ||||||  ||||||||||| |  || || |||||||||||||||||||||    
T  28665105 ctcttctctcattctcaaaccctgaccgtcacccctttcttcttcttgtcagatgggtgatttagggtcaatttt 28665031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 356
Target Start/End: Complemental strand, 21329420 - 21329368
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttt 356  Q
    |||||||| ||||||||||||||||||||| |||||| |||||||| |||||||    
T  21329420 gaggggtggtttagggtcaatttttgaccc-aaatcacccctctaaatcgtttt 21329368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 359
Target Start/End: Complemental strand, 33530591 - 33530537
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||||||||||||||||||||||  ||||||||| || ||||||||| |||||||||    
T  33530591 gaggggtgatttagggtcaattt--gacccaaaaccacccctctaacccgtttttct 33530537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 14734172 - 14734120
Alignment:
Q  306 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 358  Q
    ||||| ||||||||||||||||||||| |||||| ||||||||  ||||||||    
T  14734172 gggtggtttagggtcaatttttgaccccaaatcacccctctaaaacgtttttc 14734120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 307 - 359
Target Start/End: Complemental strand, 24045353 - 24045301
Alignment:
Q  307 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||||||| ||||||||||||||||||||||| || |||||| | |||||||    
T  24045353 ggtgatttaaggtcaatttttgacccaaaatcacccgtctaacacatttttct 24045301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 418
Target Start/End: Original strand, 37399696 - 37399752
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 418  Q
    |||||||||||| ||   |||||||||||| |||||||||||||| |||||||||||    
T  37399696 attttcacatctattttattttttattttgagatttcgtcgtctttgtgcgacgttg 37399752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 418
Target Start/End: Original strand, 39090186 - 39090242
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 418  Q
    |||||||||||| || | |||||| ||||||||||||||| |||| |||||||||||    
T  39090186 attttcacatctatttcattttttcttttgtgatttcgtcatctttgtgcgacgttg 39090242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 429
Target Start/End: Complemental strand, 15124024 - 15123957
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcttc 429  Q
    |||||||||||| ||  |||||||||||||||||||| ||||| | ||   |||||||||||||||||    
T  15124024 attttcacatctattttgttttttattttgtgatttcatcgtcatagtataacgttggtttgttcttc 15123957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 357
Target Start/End: Original strand, 8319303 - 8319357
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 357  Q
    |||| |||||||| |||||| |||||||||||||||| || | ||||||||||||    
T  8319303 gaggagtgatttatggtcaacttttgacccaaaatcacccatgtaactcgttttt 8319357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 360
Target Start/End: Complemental strand, 10250603 - 10250549
Alignment:
Q  306 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttcta 360  Q
    |||||||  |||||||||||| || ||||||||| |||||||| |||||||||||    
T  10250603 gggtgataaagggtcaattttcgatccaaaatcacccctctaattcgtttttcta 10250549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 425
Target Start/End: Complemental strand, 14734068 - 14734030
Alignment:
Q  387 ttttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 425  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  14734068 ttttgtgatttcgtcgtcttagtgcgacgttgttttgtt 14734030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 359
Target Start/End: Original strand, 42490713 - 42490747
Alignment:
Q  325 tttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||||||||||||| |||||||||||||||||||    
T  42490713 tttgacccaaaatcacccctctaactcgtttttct 42490747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 433
Target Start/End: Original strand, 43098676 - 43098718
Alignment:
Q  391 gtgatttcgtcgtcttcgtgcgacgttggtttgttcttcatct 433  Q
    |||||||||||||||| ||||| ||||| ||||||||||||||    
T  43098676 gtgatttcgtcgtcttagtgcggcgttgttttgttcttcatct 43098718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 424
Target Start/End: Original strand, 772530 - 772575
Alignment:
Q  379 gttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgt 424  Q
    ||||||| ||| |||||||||||||||| ||||||||||| |||||    
T  772530 gttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 772575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 425
Target Start/End: Original strand, 14707671 - 14707716
Alignment:
Q  380 ttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 425  Q
    |||||||||||||||||||||| |||| ||| | ||||||||||||    
T  14707671 ttttttattttgtgatttcgtcatcttagtgtggcgttggtttgtt 14707716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 35135227 - 35135162
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttct 427  Q
    |||||||||||| || |||||||||| |||||||||  |||  || ||| ||||||||||||||||    
T  35135227 attttcacatctatttcgttttttatattgtgattttatcggattagtgtgacgttggtttgttct 35135162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 378 - 426
Target Start/End: Complemental strand, 5025084 - 5025036
Alignment:
Q  378 cgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||| || |||||||||||||||||||| ||||||| ||| |||||||    
T  5025084 cgtttctttttttgtgatttcgtcgtcttagtgcgaccttgttttgttc 5025036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 350
Target Start/End: Complemental strand, 5025182 - 5025134
Alignment:
Q  303 gaggggtgatttagggtcaattttt-gacccaaaatcatccctctaact 350  Q
    |||||||||||| | |||||||||| |||||||||||| ||||||||||    
T  5025182 gaggggtgattttgagtcaattttttgacccaaaatcacccctctaact 5025134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 11832939 - 11832983
Alignment:
Q  251 tctcttatctcattctcaaaccctagccgtcattcctttcttctt 295  Q
    |||||| |||| |||||||||||||||||||||  ||||||||||    
T  11832939 tctcttctctccttctcaaaccctagccgtcatctctttcttctt 11832983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 406
Target Start/End: Complemental strand, 19895695 - 19895651
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtctt 406  Q
    |||||| ||||| ||  ||||||||||||||||||||||||||||    
T  19895695 attttcgcatctattttgttttttattttgtgatttcgtcgtctt 19895651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 26017777 - 26017725
Alignment:
Q  309 tgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 361  Q
    ||||||| ||| ||||||||||| ||||||| |||||||| |||||||| |||    
T  26017777 tgatttatggttaatttttgacctaaaatcacccctctaattcgtttttttat 26017725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 29805013 - 29804977
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatca 339  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  29805013 gaggggtggtttagggtcaatttttgaccccaaatca 29804977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 418
Target Start/End: Complemental strand, 41748543 - 41748487
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 418  Q
    |||||||||||| || |||||||  ||| ||||||||| |||||| |||||||||||    
T  41748543 attttcacatctatttcgtttttgctttcgtgatttcgccgtcttagtgcgacgttg 41748487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 44681531 - 44681594
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| || ||||||  |||||||| |||||||||||  ||| |||||||||||||||    
T  44681531 attttcacatctatttcgttttg-attttgtggtttcgtcgtctcagtgtgacgttggtttgttc 44681594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 9e-34; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 234 - 361
Target Start/End: Complemental strand, 4727118 - 4726995
Alignment:
Q  234 tcaagcctttttctctttctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgaccca 333  Q
    ||||||||||||||||||||||| ||||   |||||||||||||| ||| ||||| ||||||||  |||||||||| |||||||||||||||||||||||    
T  4727118 tcaagcctttttctctttctcttctctc---ctcaaaccctagccatcactcctt-cttctttttgtcggaggggtaatttagggtcaatttttgaccca 4727023  T
Q  334 aaatcatccctctaactcgtttttctat 361  Q
    ||||||||| | ||||||||||||||||    
T  4727022 aaatcatccatataactcgtttttctat 4726995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 10924177 - 10924113
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10924177 atttttacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 10924113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 4726972 - 4726908
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||| ||||    
T  4726972 attttcacatctgttacatttcttattttgtgatttcgtcgtcttcgtgcgatgttggttagttc 4726908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 6887222 - 6887158
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| ||  ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  6887222 attttcacatctattttgttttttcttttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 6887158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 31645899 - 31645963
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| ||  |||||||||||||||||||| |||||||||||||||||||||||||||    
T  31645899 attttcacatctattttgttttttattttgtgatttcttcgtcttcgtgcgacgttggtttgttc 31645963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 303 - 359
Target Start/End: Complemental strand, 34894041 - 34893985
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  34894041 gaggggtgatttacggtcaatttttgacccaaaatcacccctctaactcgtttttct 34893985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 379 - 426
Target Start/End: Complemental strand, 29310381 - 29310334
Alignment:
Q  379 gttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29310381 gttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 29310334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 362 - 425
Target Start/End: Complemental strand, 41063440 - 41063377
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 425  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||  ||||||||||||||    
T  41063440 attttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtatgacgttggtttgtt 41063377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 361
Target Start/End: Original strand, 28618593 - 28618651
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 361  Q
    ||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||    
T  28618593 gaggggtgatttaaggtcaatttttaacccaaaatcacccctctaactcgtttttctat 28618651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 364 - 421
Target Start/End: Original strand, 28618675 - 28618732
Alignment:
Q  364 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    |||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||    
T  28618675 tttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 28618732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 303 - 359
Target Start/End: Complemental strand, 9035073 - 9035017
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||    
T  9035073 gaggggtgatttatgatcaatttttgactcaaaatcatccctctaactcgtttttct 9035017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 303 - 358
Target Start/End: Complemental strand, 6887303 - 6887248
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 358  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||    
T  6887303 gaggggtgatttagggtcaatttttaacccaaaatcacccctctaacttgtttttc 6887248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 303 - 358
Target Start/End: Original strand, 31645818 - 31645873
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 358  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||    
T  31645818 gaggggtgatttagggtcaatttttgatccaaaatcacccctctaacttgtttttc 31645873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 380 - 426
Target Start/End: Complemental strand, 9034968 - 9034922
Alignment:
Q  380 ttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  9034968 ttttttattttgtgatttcatcgtcttcgtgcgacgttggtttgttc 9034922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 357
Target Start/End: Complemental strand, 29310474 - 29310420
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 357  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||    
T  29310474 gaggggtgatttagggtcaatttttgatccaaaatcacccctctaacttgttttt 29310420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 357
Target Start/End: Complemental strand, 33486695 - 33486641
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 357  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||| ||||||    
T  33486695 gaggggtgatttagggtcaatttttgacccaaaatcacccatctaacttgttttt 33486641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 361
Target Start/End: Original strand, 4070545 - 4070601
Alignment:
Q  304 aggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 361  Q
    |||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||    
T  4070545 aggggtgatttagggtca-tttttgacccaaaatcacccctctgactcgtttttctat 4070601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 307 - 359
Target Start/End: Original strand, 41358031 - 41358084
Alignment:
Q  307 ggtgatttagggtcaatttttgacccaaaatca-tccctctaactcgtttttct 359  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  41358031 ggtgatttagggtcaatttttgacccaaaatcaccccctctaactcgtttttct 41358084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 307 - 359
Target Start/End: Original strand, 2415393 - 2415445
Alignment:
Q  307 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||||||||||||||||||||||||||||||| || ||||||| ||||||||    
T  2415393 ggtgatttagggtcaatttttgacccaaaatcacccttctaacttgtttttct 2415445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 5378372 - 5378436
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||| || |||| | ||||||||||||||||||||||||||||||||||  |||||||||||    
T  5378372 attttcatatttgttgcattttttattttgtgatttcgtcgtcttcgtgcgaaattggtttgttc 5378436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 22397592 - 22397528
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| || || ||||| |||||||||||||||||||| ||||||||||| |||||||    
T  22397592 attttcacatctatttcggtttttcttttgtgatttcgtcgtcttagtgcgacgttgttttgttc 22397528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 357
Target Start/End: Complemental strand, 18472843 - 18472796
Alignment:
Q  310 gatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 357  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||    
T  18472843 gatttagggtcaatttttgacccaaaatcacccctctaacttgttttt 18472796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 362 - 421
Target Start/End: Complemental strand, 32390691 - 32390632
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    |||||||||||| || |||||||||||||||||||||||| | || ||||||||||||||    
T  32390691 attttcacatctatttcgttttttattttgtgatttcgtcatattagtgcgacgttggtt 32390632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 380 - 426
Target Start/End: Original strand, 2415488 - 2415534
Alignment:
Q  380 ttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||    
T  2415488 ttttttattttgtgattttgtcgtcttcatgcgacgttggtttgttc 2415534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 303 - 357
Target Start/End: Original strand, 41554475 - 41554529
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 357  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||||| ||||||    
T  41554475 gaggggtgatttaggatcaatttttgatccaaaatcacccctctaacttgttttt 41554529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 303 - 356
Target Start/End: Original strand, 37424982 - 37425035
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttt 356  Q
    ||||||||||||| ||||||||| |||||||||||||  |||||||||||||||    
T  37424982 gaggggtgatttatggtcaatttctgacccaaaatcacgcctctaactcgtttt 37425035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 359
Target Start/End: Complemental strand, 19646166 - 19646110
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||||||| |||| ||||||| ||||||||||||||| ||||||||||| |||||||    
T  19646166 gaggggtggtttaaggtcaatgtttgacccaaaatcacccctctaactcatttttct 19646110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 41988173 - 41988229
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||||||||||||| |||||||||||  |||||||  |||||||||||||||||||    
T  41988173 gaggggtgatttaggatcaatttttgattcaaaatcgcccctctaactcgtttttct 41988229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 382 - 421
Target Start/End: Original strand, 4070642 - 4070681
Alignment:
Q  382 ttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  4070642 ttttattttgtgatttcgtcgtattcgtgcgacgttggtt 4070681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 303 - 358
Target Start/End: Complemental strand, 6648038 - 6647983
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 358  Q
    |||||| |||||| |||||| ||||||||||||||||  |||||||||||||||||    
T  6648038 gaggggcgatttatggtcaaattttgacccaaaatcactcctctaactcgtttttc 6647983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 362 - 412
Target Start/End: Original strand, 28500787 - 28500837
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcg 412  Q
    |||||||||||| || ||||||||||||||||||||| ||||||| |||||    
T  28500787 attttcacatctatttcgttttttattttgtgatttcttcgtcttagtgcg 28500837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 8812276 - 8812231
Alignment:
Q  304 aggggtgatttagggtcaatttttgacccaaaatcatccctctaac 349  Q
    ||||||||| |||||||||||||| ||||||||||| |||||||||    
T  8812276 aggggtgatatagggtcaatttttaacccaaaatcacccctctaac 8812231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 426
Target Start/End: Complemental strand, 28423831 - 28423783
Alignment:
Q  378 cgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||||||||||||||||||||||| || || ||| |||||||||||    
T  28423831 cgttttttattttgtgatttcgtcgtcatcttgtgacattggtttgttc 28423783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 33486613 - 33486549
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||| ||||||| || ||||| || |||||||||||||||||||| ||||||| ||| |||||||    
T  33486613 atttacacatctatttcgtttctttttttgtgatttcgtcgtcttagtgcgaccttgttttgttc 33486549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 418
Target Start/End: Complemental strand, 34893960 - 34893904
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 418  Q
    ||||||| |||| || | |||||||||||||||||| |||||||| |||||||||||    
T  34893960 attttcatatctatttcattttttattttgtgattttgtcgtctttgtgcgacgttg 34893904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 294
Target Start/End: Original strand, 5378254 - 5378313
Alignment:
Q  236 aagcctttttctctttctcttatctcattctcaaaccctag-ccgtcattcctttcttct 294  Q
    ||||||||||||||||| ||| |||  |||||||||||||| |||||| |||||||||||    
T  5378254 aagcctttttctctttcacttctctgcttctcaaaccctagcccgtcactcctttcttct 5378313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 425
Target Start/End: Complemental strand, 19646085 - 19646022
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 425  Q
    |||||||||||| || ||||||||||||||||||||  ||||||| ||||| |||  |||||||    
T  19646085 attttcacatctatttcgttttttattttgtgattttatcgtctttgtgcggcgtcagtttgtt 19646022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 418
Target Start/End: Original strand, 35906384 - 35906423
Alignment:
Q  379 gttttttattttgtgatttcgtcgtcttcgtgcgacgttg 418  Q
    |||||||||||||| ||||||||||||| |||||||||||    
T  35906384 gttttttattttgtaatttcgtcgtctttgtgcgacgttg 35906423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 426
Target Start/End: Original strand, 20270802 - 20270848
Alignment:
Q  380 ttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||| | |||||||||||||||||| ||||||||||| |||||||    
T  20270802 ttttttttgttgtgatttcgtcgtcttagtgcgacgttgttttgttc 20270848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 426
Target Start/End: Original strand, 34866499 - 34866561
Alignment:
Q  364 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||| |||| || |||||||| ||| |||||||||||||||| ||||||||||  |||||||    
T  34866499 tttcatatctatttcgttttttctttcgtgatttcgtcgtcttagtgcgacgttattttgttc 34866561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 358
Target Start/End: Original strand, 34873848 - 34873905
Alignment:
Q  302 ggaggggtgatttagggtcaa-tttttgacccaaaatcatccctctaactcgtttttc 358  Q
    ||||||||||||||||||||| ||||| | | ||||||| || |||||||||||||||    
T  34873848 ggaggggtgatttagggtcaatttttttatcgaaaatcacccttctaactcgtttttc 34873905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 6682082 - 6682030
Alignment:
Q  243 tttctctttctcttatctcattctcaaaccctagccgtcattcctttcttctt 295  Q
    ||||||| ||||||||||  ||||||||||| | ||||||| |||||||||||    
T  6682082 tttctctctctcttatctacttctcaaaccccaaccgtcatccctttcttctt 6682030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 8812195 - 8812131
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||| |||| || |||||||  ||| ||||||||| |||||| ||||||||||| |||||||    
T  8812195 attttcatatctatttcgtttttgctttcgtgatttcgccgtcttagtgcgacgttgttttgttc 8812131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 418
Target Start/End: Original strand, 13007762 - 13007818
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 418  Q
    |||||||||||| || | |||||| ||| |||||||||||||||| |||| ||||||    
T  13007762 attttcacatctatttctttttttctttcgtgatttcgtcgtcttagtgcaacgttg 13007818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 418
Target Start/End: Original strand, 13079215 - 13079271
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 418  Q
    |||||||||||| || | |||||| ||| |||||||||||||||| |||| ||||||    
T  13079215 attttcacatctatttctttttttctttcgtgatttcgtcgtcttagtgcaacgttg 13079271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 418
Target Start/End: Original strand, 13080223 - 13080279
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 418  Q
    |||||||||||| || | |||||| ||| |||||||||||||||| |||| ||||||    
T  13080223 attttcacatctatttctttttttctttcgtgatttcgtcgtcttagtgcaacgttg 13080279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 306 - 359
Target Start/End: Original strand, 15710532 - 15710587
Alignment:
Q  306 gggtgatttagggtcaatttttg--acccaaaatcatccctctaactcgtttttct 359  Q
    |||||||||| |||||||||||   | ||||||||| |||||||||||||||||||    
T  15710532 gggtgatttatggtcaattttttttatccaaaatcacccctctaactcgtttttct 15710587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 357
Target Start/End: Complemental strand, 22397667 - 22397619
Alignment:
Q  309 tgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 357  Q
    ||||||||||||||| ||||| | |||||||||  ||||||||||||||    
T  22397667 tgatttagggtcaatatttgatcgaaaatcatcaatctaactcgttttt 22397619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 282
Target Start/End: Complemental strand, 39180027 - 39179987
Alignment:
Q  242 ttttctctttctcttatctcattctcaaaccctagccgtca 282  Q
    |||| ||| |||||| |||||||||||||||||||||||||    
T  39180027 ttttatctctctcttctctcattctcaaaccctagccgtca 39179987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 359
Target Start/End: Complemental strand, 40565280 - 40565224
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||||||| ||||||||  ||||||||||| |||||| | |||||| ||||||||||    
T  40565280 gaggggtggtttagggttgatttttgaccccaaatcacctctctaaatcgtttttct 40565224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 359
Target Start/End: Complemental strand, 41063509 - 41063465
Alignment:
Q  315 agggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||||||||||||||| ||||||||  | ||||||||||||||||    
T  41063509 agggtcaatttttgactcaaaatcactcatctaactcgtttttct 41063465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 2e-31; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 268 - 426
Target Start/End: Original strand, 42971992 - 42972172
Alignment:
Q  268 aaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat------ 361  Q
    ||||||||||||||| ||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||  | ||||||| ||||||||||          
T  42971992 aaaccctagccgtcactcctttcttgttttcgtcggaagggtgatttagggtcaatttttgacccaaaatcactcatctaacttgtttttctattttgct 42972091  T
Q  362 ----------------attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
                    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  42972092 tttattgaaataagtgattttcacatttgttacgttttttattttgtggtttcgtcgtcttcgtgcgacgttggtttgttc 42972172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 302 - 426
Target Start/End: Complemental strand, 23067974 - 23067828
Alignment:
Q  302 ggaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat----------------------attttcacatctgttacg 379  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||                      ||||||||||||||||||    
T  23067974 ggaggggtgatttagggtcaatttttgaccctaaatcacccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacg 23067875  T
Q  380 ttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  23067874 ttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 23067828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 262 - 361
Target Start/End: Complemental strand, 52555887 - 52555788
Alignment:
Q  262 attctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 361  Q
    |||||||||| |||  ||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||    
T  52555887 attctcaaactctaatcgtcactcctttcttcttttcgtcggaggggtgatttagggacaatttttgacccaaaatcacctctctaactcgtttttctat 52555788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 236 - 426
Target Start/End: Complemental strand, 46717095 - 46716874
Alignment:
Q  236 aagcctttttctctttctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaattttt-------- 327  Q
    ||||||||||||||||||||| |||| ||||||||  |||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||            
T  46717095 aagcctttttctctttctcttctctccttctcaaattctagtcgtcactcctttcttcttttcatcggatgggtgatttagggtcaatttttgatcaaat 46716996  T
Q  328 -gacccaaaatcatccctctaactcgtttttctat----------------------attttcacatctgttacgttttttattttgtgatttcgtcgtc 404  Q
     ||||| |||||| | |||||||||||||||||||                      |||||| ||||| ||||||||||||||||||||||||||| ||    
T  46716995 tgaccctaaatcacctctctaactcgtttttctattttccttttattgaaataagtgattttcgcatctattacgttttttattttgtgatttcgtcatc 46716896  T
Q  405 ttcgtgcgacgttggtttgttc 426  Q
    ||||||||||||||||||||||    
T  46716895 ttcgtgcgacgttggtttgttc 46716874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 50003220 - 50003156
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  50003220 attttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 50003156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 9474583 - 9474519
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9474583 attttcacatctatttcgttttttattttgtgatttcgtcgtattcgtgcgacgttggtttgttc 9474519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 9661923 - 9661987
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9661923 attttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 9661987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 14542556 - 14542492
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14542556 attttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 14542492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 306 - 359
Target Start/End: Original strand, 28588553 - 28588606
Alignment:
Q  306 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28588553 gggtgatttagggtcaatttttgacccaaaatcacccctctaactcgtttttct 28588606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 4634353 - 4634417
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| ||  |||||||| |||||||||||||||||||||||||||||||||||||||    
T  4634353 attttcacatctattttgttttttaatttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 4634417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 9661842 - 9661898
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  9661842 gaggggtgatttagggtcaatttttgacccaaaatcacccctctaacttgtttttct 9661898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 12519726 - 12519790
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| ||  |||||||||||||||||||||||||||| |||||||||||||||||||    
T  12519726 attttcacatctattttgttttttattttgtgatttcgtcgtcttagtgcgacgttggtttgttc 12519790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 44375308 - 44375244
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| || | |||||||||||||||||||||||||||||||||||||| ||||||||    
T  44375308 attttcacatctatttctttttttattttgtgatttcgtcgtcttcgtgcgacgttcgtttgttc 44375244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 303 - 358
Target Start/End: Complemental strand, 14542637 - 14542582
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 358  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  14542637 gaggggtgatttagggtcaatttttgacccaaaatcatctctctaacttgtttttc 14542582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 306 - 361
Target Start/End: Complemental strand, 54420834 - 54420779
Alignment:
Q  306 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 361  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  54420834 gggtgatttagggtcaatttttgacccaaaatcactcctctaactcgtttttctat 54420779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 307 - 361
Target Start/End: Original strand, 16991865 - 16991919
Alignment:
Q  307 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 361  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  16991865 ggtgatttagggtcaatttttgacccaaaatcacccatctaactcgtttttctat 16991919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 31601403 - 31601338
Alignment:
Q  362 attttcacatctgttacgtttttt-attttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| || |||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  31601403 attttcacatctatttcgtttttttattttgtgatttcgtcgtcttcttgcgacgttggtttgttc 31601338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 2945207 - 2945271
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| || ||||||||||||||||||||| ||||| | |||||||||||||||||||    
T  2945207 attttcacatctatttcgttttttattttgtgatttcatcgtcatagtgcgacgttggtttgttc 2945271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 3673612 - 3673668
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  3673612 gaggggtgatttagggtcaatttttgaccccaaatcacccctctaaatcgtttttct 3673668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 41486564 - 41486620
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  41486564 gaggggttatttagggtcaatttttgatccaaaatcacccctctaactcgtttttct 41486620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 41486645 - 41486709
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| || |||||||||||||||||||| |||||||| |||||| ||||||||||||    
T  41486645 attttcacatctatttcgttttttattttgtgattttgtcgtctttgtgcgatgttggtttgttc 41486709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 303 - 358
Target Start/End: Original strand, 4634272 - 4634327
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 358  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||    
T  4634272 gaggggtgatttaaggtcaatttttgacccaaaatcacccctctaacttgtttttc 4634327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 32189053 - 32189114
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| || ||||||||   ||||||||||||||||||||||||||||||||||||||    
T  32189053 attttcacatctatttcgtttttt---ttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 32189114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 380 - 426
Target Start/End: Complemental strand, 34115677 - 34115631
Alignment:
Q  380 ttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  34115677 ttttttattttgtgatttcgtcgtcttcgtgcgacgttggtatgttc 34115631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 361
Target Start/End: Complemental strand, 46729044 - 46728987
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 361  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||    
T  46729044 gaggggtgatttagggtcaatttttgacccaaaatca-ccctctaatttgtttttctat 46728987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 364 - 418
Target Start/End: Complemental strand, 54420755 - 54420701
Alignment:
Q  364 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 418  Q
    |||||||||| || ||||||||||||||||||||||||||||| |||||||||||    
T  54420755 tttcacatctatttcgttttttattttgtgatttcgtcgtctttgtgcgacgttg 54420701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 306 - 359
Target Start/End: Complemental strand, 4959697 - 4959644
Alignment:
Q  306 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||| |||||||    
T  4959697 gggtgatttagggtcaatttttgatccaaaatcatcactctaactcatttttct 4959644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 411
Target Start/End: Complemental strand, 52555765 - 52555716
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgc 411  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  52555765 attttcacatcttttacgttttttattttgtgattttgtcgtcttcgtgc 52555716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 362 - 433
Target Start/End: Complemental strand, 1657610 - 1657539
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcttcatct 433  Q
    |||||||||||| || || ||||| |||||||||||||||||||| ||||||| ||| ||||||| ||||||    
T  1657610 attttcacatctatttcgctttttcttttgtgatttcgtcgtcttagtgcgacattgttttgttcgtcatct 1657539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 309 - 359
Target Start/End: Complemental strand, 1646060 - 1646010
Alignment:
Q  309 tgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||||||||| |||| |||||||||||||| |||||||||||||||||||    
T  1646060 tgatttagggttaattgttgacccaaaatcacccctctaactcgtttttct 1646010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 307 - 357
Target Start/End: Original strand, 3169033 - 3169083
Alignment:
Q  307 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 357  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||||||||    
T  3169033 ggtgatttagagtcaattattgacccaaaatcacccctctaactcgttttt 3169083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 362 - 424
Target Start/End: Original strand, 9549537 - 9549599
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgt 424  Q
    |||| ||||||| || ||||||||||||| ||||||||||||| |||||| ||||||||||||    
T  9549537 atttccacatctatttcgttttttattttttgatttcgtcgtcgtcgtgctacgttggtttgt 9549599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 303 - 356
Target Start/End: Original strand, 43156765 - 43156819
Alignment:
Q  303 gaggggtgattta-gggtcaatttttgacccaaaatcatccctctaactcgtttt 356  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||    
T  43156765 gaggggtgatttacgggtcaatttttgacccaaaatcacccctctaacacgtttt 43156819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 364 - 418
Target Start/End: Original strand, 53903681 - 53903735
Alignment:
Q  364 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 418  Q
    |||||||||| || | |||||||||||||||||||||||||||||| ||||||||    
T  53903681 tttcacatctatttcattttttattttgtgatttcgtcgtcttcgtacgacgttg 53903735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 251 - 336
Target Start/End: Complemental strand, 478205 - 478121
Alignment:
Q  251 tctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaa 336  Q
    |||||| |||| ||||||||||||||||||||  ||||||||||| |  |  ||||||||||||| |||||| |||||||||||||    
T  478205 tctcttctctccttctcaaaccctagccgtcacccctttcttcttctttttagaggggtgatttatggtcaa-ttttgacccaaaa 478121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 307 - 348
Target Start/End: Complemental strand, 1657691 - 1657650
Alignment:
Q  307 ggtgatttagggtcaatttttgacccaaaatcatccctctaa 348  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  1657691 ggtgatttagggtcaatttttgacccaaaatcacccctctaa 1657650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 5388504 - 5388560
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||||||||||||||||||||||||| |  |||||| |||||||| ||||||||||    
T  5388504 gaggggtgatttagggtcaatttttgaactcaaatcacccctctaaatcgtttttct 5388560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 421
Target Start/End: Original strand, 20961521 - 20961578
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    |||||||||||| || ||||||  ||||||||||||| ||||||||||||||||||||||    
T  20961521 attttcacatctatttcgtttt--attttgtgatttcatcgtcttcgtgcgacgttggtt 20961578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 28990368 - 28990432
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| ||  ||||||||||||| ||||| |||||| | |||||||||||||||||||    
T  28990368 attttcacatctattttgttttttattttgggattttgtcgtcatagtgcgacgttggtttgttc 28990432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 34115769 - 34115721
Alignment:
Q  311 atttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||||||||||||||||||||||||||| |||||||  ||||||||||    
T  34115769 atttagggtcaatttttgacccaaaatcacccctctagttcgtttttct 34115721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 44021615 - 44021551
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| |  |||||||||||||||||||| ||||||||  || |||||||||||||||    
T  44021615 attttcacatctatatcgttttttattttgtgattttgtcgtcttaatgtgacgttggtttgttc 44021551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 336
Target Start/End: Complemental strand, 394473 - 394384
Alignment:
Q  243 tttctctttctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaa 336  Q
    ||||||| |||||| |||| ||||||||||||||  ||||  | |||||||||||    ||||||||||||||||||||| |||||||||||||    
T  394473 tttctctctctcttctctctttctcaaaccctagttgtcacccttttcttcttttt---ggaggggtgatttagggtcaa-ttttgacccaaaa 394384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 304 - 359
Target Start/End: Complemental strand, 7242893 - 7242838
Alignment:
Q  304 aggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||| |||||||||||||||||||||||||||||| |  ||||||| ||||||||    
T  7242893 aggggcgatttagggtcaatttttgacccaaaatcacctttctaacttgtttttct 7242838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 426
Target Start/End: Original strand, 38434687 - 38434733
Alignment:
Q  380 ttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||| |||||||||||||||||||| ||||||||||| |||||||    
T  38434687 ttttttcttttgtgatttcgtcgtcttagtgcgacgttgttttgttc 38434733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 336
Target Start/End: Complemental strand, 43244578 - 43244491
Alignment:
Q  251 tctcttatctcattctcaaaccctagccgtcattcct---ttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaa 336  Q
    |||||| |||| ||||||||||||||||||||| | |   ||||||||||  |  |||||||||||||||||||| |||||||||||||    
T  43244578 tctcttctctctttctcaaaccctagccgtcatccttttcttcttcttttttttagaggggtgatttagggtcaa-ttttgacccaaaa 43244491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 361
Target Start/End: Complemental strand, 44375401 - 44375331
Alignment:
Q  291 ttcttttcatcggaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 361  Q
    ||||||| ||| || | |||||||| |||||||||||||| ||||||||  ||||||| ||||||||||||    
T  44375401 ttctttttatcagatgagtgatttaaggtcaatttttgactcaaaatcactcctctaattcgtttttctat 44375331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 357
Target Start/End: Complemental strand, 37869536 - 37869488
Alignment:
Q  308 gtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 357  Q
    ||||||||||||||||| || ||| |||||||||||||||||||||||||    
T  37869536 gtgatttagggtcaattgtttacc-aaaatcatccctctaactcgttttt 37869488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 359
Target Start/End: Complemental strand, 4622836 - 4622780
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||||||||||| ||||||||||||| ||||||||| | || || |||||||||||    
T  4622836 gaggggtgatttaaggtcaatttttgatccaaaatcacctctgtatctcgtttttct 4622780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 11817061 - 11817117
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||||||| |||||||| || |||||||||||||||| |||||||  ||||||||||    
T  11817061 gaggggtggtttagggttaagttttgacccaaaatcacccctctacatcgtttttct 11817117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 40859716 - 40859780
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| || |||||||  ||| ||||||||| |||||| ||||||||||| |||||||    
T  40859716 attttcacatctatttcgtttttgctttcgtgatttcgccgtcttagtgcgacgttgttttgttc 40859780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 359
Target Start/End: Complemental strand, 46775965 - 46775925
Alignment:
Q  319 tcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||||||||||||||||||||| ||||| |||||||||||    
T  46775965 tcaatttttgacccaaaatcatcactctatctcgtttttct 46775925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 359
Target Start/End: Complemental strand, 29577209 - 29577154
Alignment:
Q  304 aggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||||||||||||||||| |||||||| ||||||   ||||||| |||||||||||    
T  29577209 aggggtgatttagggtcactttttgactcaaaatatcccctctatctcgtttttct 29577154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 421
Target Start/End: Complemental strand, 30470145 - 30470107
Alignment:
Q  382 ttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  30470145 ttttattttgtgatt-cgtcgtcttcgtgcgacgttggtt 30470107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 425
Target Start/End: Complemental strand, 37869461 - 37869398
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 425  Q
    |||||||||||| ||   |||| |||| |||||||| ||||||||| |||||||||||||||||    
T  37869461 attttcacatctattttattttgtattatgtgattttgtcgtcttcttgcgacgttggtttgtt 37869398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 357
Target Start/End: Original strand, 1124929 - 1124979
Alignment:
Q  307 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 357  Q
    ||||||||||  |||||||||||||||||||||| | |||||||| |||||    
T  1124929 ggtgatttagaatcaatttttgacccaaaatcattcatctaactcattttt 1124979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 416
Target Start/End: Complemental strand, 4622733 - 4622699
Alignment:
Q  382 ttttattttgtgatttcgtcgtcttcgtgcgacgt 416  Q
    ||||||||||||||||||||||||| |||||||||    
T  4622733 ttttattttgtgatttcgtcgtcttagtgcgacgt 4622699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 357
Target Start/End: Original strand, 6408433 - 6408483
Alignment:
Q  307 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 357  Q
    ||||||| ||||||||||||| ||||||||||| | || ||||||||||||    
T  6408433 ggtgattaagggtcaattttttacccaaaatcacctctttaactcgttttt 6408483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 426
Target Start/End: Complemental strand, 6789914 - 6789856
Alignment:
Q  368 acatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||| || |||||||||||||||||||| |||||||| ||||  |||| ||||||||    
T  6789914 acatctatttcgttttttattttgtgattttgtcgtcttagtgcagcgtttgtttgttc 6789856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 295
Target Start/End: Original strand, 24825562 - 24825599
Alignment:
Q  258 tctcattctcaaaccctagccgtcattcctttcttctt 295  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  24825562 tctctttctcaaaccctagccgtcactcctttcttctt 24825599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 425
Target Start/End: Complemental strand, 29589387 - 29589342
Alignment:
Q  380 ttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 425  Q
    |||||| |||||| ||||||||||||| ||||||||||| ||||||    
T  29589387 ttttttcttttgttatttcgtcgtcttagtgcgacgttgttttgtt 29589342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 357
Target Start/End: Complemental strand, 30416746 - 30416693
Alignment:
Q  304 aggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 357  Q
    |||||| ||||| ||||||||||||| |||||||||  ||||||||| ||||||    
T  30416746 aggggtaatttatggtcaatttttgaaccaaaatcacacctctaacttgttttt 30416693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 7242813 - 7242749
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| || | ||||||||| |||||| | |||||||| ||||||||| | |||||||    
T  7242813 attttcacatctatttcattttttattctgtgatattgtcgtcttagtgcgacgtcgatttgttc 7242749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 378 - 426
Target Start/End: Complemental strand, 15730009 - 15729961
Alignment:
Q  378 cgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||| || |||||||||||||||||||| ||||||| ||| |||||||    
T  15730009 cgtttctttttttgtgatttcgtcgtcttagtgcgaccttgttttgttc 15729961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 43156846 - 43156910
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||||||||  |  |||||||  ||||||||||||||||||| |||| |||||| |||||||    
T  43156846 attttcacatctactttgtttttttctttgtgatttcgtcgtcttagtgcaacgttgttttgttc 43156910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 378 - 426
Target Start/End: Complemental strand, 46728948 - 46728900
Alignment:
Q  378 cgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||| || |||||||||||||||||||| ||||||| ||| |||||||    
T  46728948 cgtttctttttttgtgatttcgtcgtcttagtgcgaccttgttttgttc 46728900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 357
Target Start/End: Original strand, 51646088 - 51646136
Alignment:
Q  309 tgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 357  Q
    ||||||| ||||||||||| ||| ||||||| |||||||| ||||||||    
T  51646088 tgatttatggtcaatttttaacctaaaatcacccctctaattcgttttt 51646136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 406
Target Start/End: Original strand, 51646163 - 51646207
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtctt 406  Q
    |||||||||||| || |||||||| ||| ||||||||||||||||    
T  51646163 attttcacatctatttcgttttttctttcgtgatttcgtcgtctt 51646207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 361
Target Start/End: Original strand, 53903617 - 53903657
Alignment:
Q  321 aatttttgacccaaaatcatccctctaactcgtttttctat 361  Q
    |||||||||||| ||||||  ||||||||||||||||||||    
T  53903617 aatttttgaccctaaatcactcctctaactcgtttttctat 53903657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 1e-23; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 54240156 - 54240220
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  54240156 attttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 54240220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 303 - 431
Target Start/End: Original strand, 45664218 - 45664360
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat--------------attttcacatctgttacgttttttatt 388  Q
    ||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||              |||||||||||| || |||||||||||    
T  45664218 gaggggtgatttaggatcaaattttgacccaaaatcacccctctaactcgtttttctatttctcttttaagtgattttcacatctatttcgttttttatt 45664317  T
Q  389 ttgtgatttcgtcgtcttcgtgcgacgttggtttgttcttcat 431  Q
    |||||||||||| |||||||||| ||||| |||| ||| ||||    
T  45664318 ttgtgatttcgttgtcttcgtgctacgttcgttttttcgtcat 45664360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 1165440 - 1165376
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1165440 attttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 1165376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 303 - 359
Target Start/End: Complemental strand, 20201183 - 20201127
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20201183 gaggggtgatttagggtcaatttttgacccaaaatcacccctctaactcgtttttct 20201127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 303 - 359
Target Start/End: Complemental strand, 20203365 - 20203309
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20203365 gaggggtgatttagggtcaatttttgacccaaaatcacccctctaactcgtttttct 20203309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 43029753 - 43029817
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43029753 attttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 43029817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 362 - 421
Target Start/End: Complemental strand, 47914637 - 47914578
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  47914637 attttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 47914578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 306 - 361
Target Start/End: Original strand, 50519782 - 50519837
Alignment:
Q  306 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 361  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  50519782 gggtgatttagggtcaatttttgacccaaaatcacccctctaactcgtttttctat 50519837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 364 - 421
Target Start/End: Complemental strand, 3088705 - 3088648
Alignment:
Q  364 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  3088705 tttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 3088648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 303 - 359
Target Start/End: Complemental strand, 1165521 - 1165465
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  1165521 gaggggtgatttagggtcaatttttgacccaaaatcacccctctaacttgtttttct 1165465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 21803600 - 21803664
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| || ||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  21803600 attttcacatctatttcgttttttattttgtgatttcgtagtcttcgtgcgacattggtttgttc 21803664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 43839562 - 43839498
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| || |||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  43839562 attttcacatctatttcgttttttattttgtgatttcgtcatcttcgtgcgatgttggtttgttc 43839498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 362 - 421
Target Start/End: Complemental strand, 14741369 - 14741310
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    |||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||    
T  14741369 attttcacatctatttcattttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 14741310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 361
Target Start/End: Complemental strand, 22286874 - 22286816
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 361  Q
    ||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||    
T  22286874 gaggggtgatttagggtcaatttttgacctaaaattacccctctaactcgtttttctat 22286816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 361
Target Start/End: Complemental strand, 41882533 - 41882475
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 361  Q
    |||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  41882533 gaggagtgatttagggtcaatttttgacccaaaattacccctctaactcgtttttctat 41882475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 364 - 421
Target Start/End: Complemental strand, 22286792 - 22286735
Alignment:
Q  364 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    |||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||    
T  22286792 tttcacatctatttcgttttttattttgtgatttcgtcgtcttcgcgcgacgttggtt 22286735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 306 - 359
Target Start/End: Complemental strand, 35501881 - 35501828
Alignment:
Q  306 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  35501881 gggtgatttagggttaatttttgacccaaaatcacccctctaactcgtttttct 35501828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 364 - 421
Target Start/End: Complemental strand, 41882451 - 41882394
Alignment:
Q  364 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    |||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||    
T  41882451 tttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 41882394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 29182652 - 29182588
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||| |||| ||  |||||||||||||||||||||||||||||||| |||||||||||||||    
T  29182652 attttcatatctattttgttttttattttgtgatttcgtcgtcttcgtgtgacgttggtttgttc 29182588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 380 - 433
Target Start/End: Complemental strand, 22893741 - 22893688
Alignment:
Q  380 ttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcttcatct 433  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||| ||||||    
T  22893741 ttttttattttgtgatttcgtcttcttagtgcgacgttggtttgttcgtcatct 22893688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 306 - 359
Target Start/End: Complemental strand, 25374192 - 25374139
Alignment:
Q  306 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||||||||||||    
T  25374192 gggtgatttagggttaatttttgacctaaaatcacccctctaactcgtttttct 25374139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 303 - 359
Target Start/End: Complemental strand, 1220340 - 1220284
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||||||||||||| |||||||||||  |||||||| |||||||||||||||||||    
T  1220340 gaggggtgatttaggatcaatttttgattcaaaatcacccctctaactcgtttttct 1220284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 21803519 - 21803575
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||| |||||| || |||||||||||||||||||||| |||||||||||||||||||    
T  21803519 gaggagtgattcagtgtcaatttttgacccaaaatcacccctctaactcgtttttct 21803575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 35501803 - 35501739
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| || |||||||||||||||||||| ||||||||| || |||||| ||||||||    
T  35501803 attttcacatctatttcgttttttattttgtgattttgtcgtcttcatgtgacgttagtttgttc 35501739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 362 - 425
Target Start/End: Complemental strand, 20201102 - 20201039
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 425  Q
    |||||||||||| ||  |||||||||||| |||||||||||| |||||||||| ||||||||||    
T  20201102 attttcacatctattttgttttttattttatgatttcgtcgttttcgtgcgacattggtttgtt 20201039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 362 - 425
Target Start/End: Complemental strand, 20203284 - 20203221
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 425  Q
    |||||||||||| ||  |||||||||||| |||||||||||| |||||||||| ||||||||||    
T  20203284 attttcacatctattttgttttttattttatgatttcgtcgttttcgtgcgacattggtttgtt 20203221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 303 - 354
Target Start/End: Original strand, 22844040 - 22844091
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtt 354  Q
    ||||| ||||||| ||||||||||||||||||||||| ||||||||||||||    
T  22844040 gagggctgatttaaggtcaatttttgacccaaaatcacccctctaactcgtt 22844091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 303 - 358
Target Start/End: Original strand, 43029672 - 43029727
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 358  Q
    ||||||||||||||| ||| ||||||||||||||||| |||||||||| |||||||    
T  43029672 gaggggtgatttaggatcattttttgacccaaaatcacccctctaacttgtttttc 43029727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 309 - 359
Target Start/End: Original strand, 53426799 - 53426849
Alignment:
Q  309 tgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||||||    
T  53426799 tgatttagggtcaattttttacgcaaaatcacccctctaactcgtttttct 53426849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 359
Target Start/End: Complemental strand, 1806585 - 1806529
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||||||| |||||||||||||||||| || |||||| |||||||| ||||||||||    
T  1806585 gaggggtggtttagggtcaatttttgatcccaaatcacccctctaaatcgtttttct 1806529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 4019591 - 4019646
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||||||||||||||||||| ||||||| |||||||| | |||||||||||||||||    
T  4019591 gaggggtgatttagggtcaa-ttttgactcaaaatcacctctctaactcgtttttct 4019646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 426
Target Start/End: Original strand, 20251747 - 20251791
Alignment:
Q  382 ttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||    
T  20251747 ttttgttttgtgattttgtcgtcttcgtgcgacgttggtttgttc 20251791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 421
Target Start/End: Complemental strand, 28995350 - 28995293
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    |||||||||||| || ||||||  |||||||||||| |||||||||||||||||||||||    
T  28995350 attttcacatctatttcgtttt--attttgtgattttgtcgtcttcgtgcgacgttggtt 28995293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 414
Target Start/End: Complemental strand, 32089974 - 32089922
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgac 414  Q
    |||||||||||| || | ||||||||||||||||||||||||||| |||||||    
T  32089974 attttcacatctatttcattttttattttgtgatttcgtcgtcttagtgcgac 32089922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 37051613 - 37051669
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||| ||||||||||||||||||||||||  ||||| |||||||| ||||||||||    
T  37051613 gagggatgatttagggtcaatttttgaccctgaatcacccctctaaatcgtttttct 37051669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 359
Target Start/End: Complemental strand, 40462116 - 40462064
Alignment:
Q  307 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||||||||| ||||| |||||||||||||||| |||||||||| ||||||||    
T  40462116 ggtgatttagagtcaaattttgacccaaaatcacccctctaacttgtttttct 40462064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 362 - 425
Target Start/End: Complemental strand, 25374114 - 25374051
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 425  Q
    |||||||||||| || | |||||||||||||||||||  |||||| ||||||| ||||||||||    
T  25374114 attttcacatctatttcattttttattttgtgatttctccgtcttagtgcgactttggtttgtt 25374051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 363 - 426
Target Start/End: Original strand, 27831183 - 27831246
Alignment:
Q  363 ttttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||||||| || ||||||| ||||||||||||  | ||||| |||||||||||||||||||    
T  27831183 ttttcacatctattccgtttttgattttgtgatttttttgtcttagtgcgacgttggtttgttc 27831246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 382 - 421
Target Start/End: Complemental strand, 33977948 - 33977909
Alignment:
Q  382 ttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  33977948 ttttattttgtgatttcatcgtcttcgtgcgacgttggtt 33977909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 362 - 425
Target Start/End: Original strand, 40365296 - 40365359
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 425  Q
    |||||||||||| ||  ||||||||||||||||||| ||| ||||  |||||||||||||||||    
T  40365296 attttcacatctattttgttttttattttgtgattttgtcatcttaatgcgacgttggtttgtt 40365359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 362 - 417
Target Start/End: Original strand, 53426868 - 53426923
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgtt 417  Q
    |||||||||||| || | |||||| |||||||||||||||||||| ||||||||||    
T  53426868 attttcacatctatttcattttttcttttgtgatttcgtcgtcttagtgcgacgtt 53426923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 349
Target Start/End: Original strand, 42106100 - 42106146
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaac 349  Q
    ||||||||||||||||||||||||||||| ||||||| || ||||||    
T  42106100 gaggggtgatttagggtcaatttttgacctaaaatcacccatctaac 42106146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 20251640 - 20251697
Alignment:
Q  303 gaggggtgatttagggtcaatttttg-acccaaaatcatccctctaactcgtttttct 359  Q
    |||||||||||||||||| ||||||  ||||||||||| || ||||||||||||||||    
T  20251640 gaggggtgatttagggtcgatttttttacccaaaatcacccttctaactcgtttttct 20251697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 339
Target Start/End: Complemental strand, 25939598 - 25939565
Alignment:
Q  306 gggtgatttagggtcaatttttgacccaaaatca 339  Q
    ||||||||||||||||||||||||||||||||||    
T  25939598 gggtgatttagggtcaatttttgacccaaaatca 25939565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 359
Target Start/End: Original strand, 43242803 - 43242856
Alignment:
Q  306 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||||||||||||||| |||||||| |||||||| || | ||||||||||||||    
T  43242803 gggtgatttagggtcagtttttgacacaaaatcacccatttaactcgtttttct 43242856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 7656592 - 7656546
Alignment:
Q  311 atttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  7656592 atttagggtcaatttttgaccc-aaatca-ccctctaactcgtttttct 7656546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 418
Target Start/End: Original strand, 21585969 - 21586025
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 418  Q
    |||||||||||| ||  ||||||||||||||||||||||| |||| ||| |||||||    
T  21585969 attttcacatctattttgttttttattttgtgatttcgtcatcttagtgtgacgttg 21586025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 32238040 - 32237976
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||| |||| || | |||||||||||||||||| ||| |||| |||||| ||||||||||||    
T  32238040 attttcatatctatttcattttttattttgtgattttgtcatctttgtgcgatgttggtttgttc 32237976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 414
Target Start/End: Original strand, 33076382 - 33076434
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgac 414  Q
    ||||| |||||| || |||||||||||||||||||| ||||| ||||||||||    
T  33076382 atttttacatctatttcgttttttattttgtgattttgtcgttttcgtgcgac 33076434  T

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Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 346
Target Start/End: Complemental strand, 25631735 - 25631692
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctct 346  Q
    |||||||| ||| |||||||||||||||| ||||||||||||||    
T  25631735 gaggggtggttttgggtcaatttttgacctaaaatcatccctct 25631692  T

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Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 426
Target Start/End: Complemental strand, 29776732 - 29776670
Alignment:
Q  363 ttttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||||||| || ||||||| |||||||||||| ||| |||| |||||||||| ||||||||    
T  29776732 ttttcacatctatttcgttttt-attttgtgattttgtcatctttgtgcgacgtttgtttgttc 29776670  T

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Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 336
Target Start/End: Complemental strand, 30156468 - 30156399
Alignment:
Q  263 ttctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaa 336  Q
    ||||||||| ||| || ||| || |||||||||||||   |||||||||||||||||||| |||||||||||||    
T  30156468 ttctcaaactctaaccatcactcatttcttcttttca---gaggggtgatttagggtcaa-ttttgacccaaaa 30156399  T

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Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 359
Target Start/End: Original strand, 33070152 - 33070199
Alignment:
Q  312 tttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||||||||||||||| |||| |||||| |||||||| ||||||||||    
T  33070152 tttagggtcaatttttaaccccaaatcacccctctaaatcgtttttct 33070199  T

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Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 426
Target Start/End: Complemental strand, 40462038 - 40461975
Alignment:
Q  363 ttttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||| |||||| || || ||||||||||||||||| |||||||| |||||| |||| |||||||    
T  40462038 tttttacatctatttcggtttttattttgtgattttgtcgtcttagtgcgatgttgatttgttc 40461975  T

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Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 357
Target Start/End: Original strand, 2598076 - 2598126
Alignment:
Q  307 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 357  Q
    |||||||||  ||| ||||||||||||||||||  ||||||||||||||||    
T  2598076 ggtgatttaaagtcgatttttgacccaaaatcactcctctaactcgttttt 2598126  T

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Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 359
Target Start/End: Original strand, 34766973 - 34767024
Alignment:
Q  306 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||||||||||||| ||| || |||||||||||| |||||||||||||||||||    
T  34766973 gggtgatttagggttaatatt-gacccaaaatca-ccctctaactcgtttttct 34767024  T

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Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 357
Target Start/End: Original strand, 40797023 - 40797075
Alignment:
Q  304 aggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 357  Q
    |||||||||||||||| || |||||| ||||||||| |||||||||| ||||||    
T  40797023 aggggtgatttagggttaa-ttttgagccaaaatcacccctctaacttgttttt 40797075  T

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Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 359
Target Start/End: Complemental strand, 43839638 - 43839587
Alignment:
Q  306 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    |||||||||||||||||||||||| ||||| ||| |||||||||||| ||||||    
T  43839638 gggtgatttagggtcaatttttga-ccaaagtca-ccctctaactcgcttttct 43839587  T

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Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 394 - 426
Target Start/End: Complemental strand, 7656527 - 7656495
Alignment:
Q  394 atttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||| ||||||||||||||||||||||||||    
T  7656527 atttcgccgtcttcgtgcgacgttggtttgttc 7656495  T

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Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 425
Target Start/End: Complemental strand, 25939524 - 25939460
Alignment:
Q  361 tattttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 425  Q
    ||||||||||||| ||  ||||||| ||| |||||||||| ||||  ||||||||||| ||||||    
T  25939524 tattttcacatctattctgttttttctttcgtgatttcgttgtctcagtgcgacgttgttttgtt 25939460  T

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Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 359
Target Start/End: Complemental strand, 29182705 - 29182677
Alignment:
Q  331 ccaaaatcatccctctaactcgtttttct 359  Q
    |||||||||||||||||||||||||||||    
T  29182705 ccaaaatcatccctctaactcgtttttct 29182677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 357
Target Start/End: Complemental strand, 33978041 - 33977994
Alignment:
Q  307 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 357  Q
    ||||||||| |||||||||||||||||||   |||||| ||||||||||||    
T  33978041 ggtgatttaaggtcaatttttgacccaaa---atccctttaactcgttttt 33977994  T

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Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 422
Target Start/End: Original strand, 34767075 - 34767115
Alignment:
Q  382 ttttattttgtgatttcgtcgtcttcgtgcgacgttggttt 422  Q
    |||||||||||||| |||||||||| |||||| ||||||||    
T  34767075 ttttattttgtgatctcgtcgtctttgtgcgatgttggttt 34767115  T

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Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Original strand, 50519861 - 50519901
Alignment:
Q  364 tttcacatctgttacgttttttattttgtgatttcgtcgtc 404  Q
    |||||||||| || ||||||||||||| |||||||||||||    
T  50519861 tttcacatctatttcgttttttattttttgatttcgtcgtc 50519901  T

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Target: scaffold0316 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 12247 - 12183
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12247 attttcacacctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 12183  T

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Target: scaffold0316; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 359
Target Start/End: Complemental strand, 12318 - 12272
Alignment:
Q  313 ttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||||||||||||||||||||||||||| ||||| |||||| ||||    
T  12318 ttagggtcaatttttgacccaaaatcatctctctagctcgttcttct 12272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 1185 - 1121
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| ||  |||||||||||||||||||||||||||| |||||||||||||||||||    
T  1185 attttcacatctattttgttttttattttgtgatttcgtcgtcttagtgcgacgttggtttgttc 1121  T

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Target: scaffold0024 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 36599 - 36663
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| ||   |||||||||||||||||||||||||||||||||||||||||||||||    
T  36599 attttcacatctattttattttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 36663  T

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Target: scaffold0045 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 361
Target Start/End: Complemental strand, 9773 - 9715
Alignment:
Q  303 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 361  Q
    ||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  9773 gagggatgatttagggtcaatttttgacccaaaatcactcctctaactcgtttttctat 9715  T

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Target: scaffold0045; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 421
Target Start/End: Complemental strand, 9674 - 9642
Alignment:
Q  389 ttgtgatttcgtcgtcttcgtgcgacgttggtt 421  Q
    ||||||||||||||||||||| |||||||||||    
T  9674 ttgtgatttcgtcgtcttcgtacgacgttggtt 9642  T

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Target: scaffold0012 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 362 - 426
Target Start/End: Original strand, 244706 - 244770
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||| || ||||||||| |||||||||| |||||||||||||||| |||||||||||    
T  244706 attttcacatctatttcgttttttagtttgtgattttgtcgtcttcgtgcgaccttggtttgttc 244770  T

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Target: scaffold0665 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 379 - 426
Target Start/End: Complemental strand, 1154 - 1107
Alignment:
Q  379 gttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||    
T  1154 gttttttattttgtgatttcgtcatcttcgtgtgacgttggtttgttc 1107  T

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Target: scaffold0665; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 346
Target Start/End: Complemental strand, 1213 - 1174
Alignment:
Q  306 gggtgatttagggtcaatttttgacccaaaatcatccctct 346  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  1213 gggtgatttagg-tcaatttttgacccaaaatcatccctct 1174  T

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Target: scaffold0150 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 363 - 426
Target Start/End: Complemental strand, 10354 - 10291
Alignment:
Q  363 ttttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||||||| ||  ||||||||||||||||||| || ||||| |||||||||||||||||||    
T  10354 ttttcacatctatttagttttttattttgtgatttggttgtcttagtgcgacgttggtttgttc 10291  T

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Target: scaffold1294 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1294
Description:

Target: scaffold1294; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 774 - 822
Alignment:
Q  308 gtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttt 356  Q
    |||||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  774 gtgatttaaggtcaatttttgaccaaaaatcatcactctaactcgtttt 822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 11896 - 11844
Alignment:
Q  309 tgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 361  Q
    |||||||| ||||||||||||||||||||||  | ||||||||||||||||||    
T  11896 tgatttagtgtcaatttttgacccaaaatcactcatctaactcgtttttctat 11844  T

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Target: scaffold0018 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 137102 - 137038
Alignment:
Q  362 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||| |||||| || |||||||| |||||||||||||||||||| || |||||||| |||||||    
T  137102 attttaacatctatttcgttttttcttttgtgatttcgtcgtcttagtacgacgttgttttgttc 137038  T

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Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 359
Target Start/End: Original strand, 11011 - 11064
Alignment:
Q  306 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 359  Q
    ||||||||| |||||||||||||||  ||||||| ||||||||||| |||||||    
T  11011 gggtgattttgggtcaatttttgacttaaaatcacccctctaactcatttttct 11064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 381 - 426
Target Start/End: Original strand, 11107 - 11148
Alignment:
Q  381 tttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    ||||||||||||||||||||    ||||||||||||||||||||||    
T  11107 tttttattttgtgatttcgt----ttcgtgcgacgttggtttgttc 11148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 326
Target Start/End: Original strand, 2839 - 2902
Alignment:
Q  263 ttctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttt 326  Q
    |||||||||||||| |||||  ||||||||||| |  |  ||||||||||||||||||||||||    
T  2839 ttctcaaaccctagtcgtcacccctttcttcttcttgttagaggggtgatttagggtcaatttt 2902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 426
Target Start/End: Complemental strand, 6811 - 6765
Alignment:
Q  380 ttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 426  Q
    |||||||||||||||||| || ||||| |||| ||||||||||||||    
T  6811 ttttttattttgtgattttgttgtcttagtgcaacgttggtttgttc 6765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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