View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7317_high_23 (Length: 291)
Name: NF7317_high_23
Description: NF7317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7317_high_23 |
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Alignment Details
Target: chr1 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 27 - 280
Target Start/End: Complemental strand, 14370756 - 14370503
Alignment:
| Q |
27 |
ataagatacccttaaaaattctacttctcaacaaacagaaaatttcaaatcttctttctacaagactcatgtcttttcttccctcacaatgtcaaaggtt |
126 |
Q |
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| T |
14370756 |
ataagatacccttaaaaattctacttctcaacaaacagaaagtttcaaattttctttctacaagacccatgtcttttcttccctcacaatgtcaaaggtt |
14370657 |
T |
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| Q |
127 |
ctctatatattacaacatttaactaccaatgtagaaattgtacaccttctttacataaattaaaagtcttcttccttctcaacttcctctacctctcaac |
226 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14370656 |
ctctatatattacaacatttaactaccaatgtagaaattgtacaccttctttacataaattaaaagtcttcttccttctcaacttcctctacctctcaac |
14370557 |
T |
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| Q |
227 |
atgatatactcttcaatactttatattaatcattattaatatccactgtttcat |
280 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14370556 |
atgatatactcttcaatactttatattaatcattattaatatccactgtttcat |
14370503 |
T |
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