View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7317_low_1 (Length: 1261)

Name: NF7317_low_1
Description: NF7317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7317_low_1
NF7317_low_1
[»] chr3 (37 HSPs)
chr3 (462-1041)||(21389152-21389730)
chr3 (27-271)||(21392977-21393221)
chr3 (674-1037)||(11645713-11646074)
chr3 (1050-1249)||(21387076-21387275)
chr3 (332-469)||(21392779-21392915)
chr3 (54-266)||(16973340-16973551)
chr3 (18-267)||(25921179-25921426)
chr3 (1057-1176)||(4155378-4155497)
chr3 (1098-1176)||(16926901-16926979)
chr3 (1057-1176)||(20327760-20327879)
chr3 (1057-1152)||(34992684-34992779)
chr3 (1057-1176)||(20303296-20303415)
chr3 (1057-1176)||(35038340-35038458)
chr3 (1049-1174)||(16239647-16239773)
chr3 (1090-1176)||(54567946-54568032)
chr3 (1049-1174)||(31317284-31317412)
chr3 (1057-1175)||(37246764-37246882)
chr3 (1067-1176)||(45828073-45828182)
chr3 (1068-1176)||(1722998-1723106)
chr3 (1057-1145)||(19954363-19954451)
chr3 (1068-1148)||(46139344-46139424)
chr3 (1053-1141)||(52724128-52724216)
chr3 (1057-1123)||(20303210-20303276)
chr3 (1080-1176)||(11589839-11589935)
chr3 (1057-1176)||(13574831-13574951)
chr3 (1067-1150)||(21809061-21809145)
chr3 (1096-1176)||(49629659-49629739)
chr3 (1089-1187)||(40765878-40765977)
chr3 (1057-1195)||(8142558-8142696)
chr3 (221-267)||(24699438-24699484)
chr3 (1131-1174)||(39269387-39269430)
chr3 (1109-1176)||(54368570-54368637)
chr3 (1067-1184)||(11659602-11659720)
chr3 (1130-1176)||(27783112-27783158)
chr3 (1080-1162)||(28087149-28087231)
chr3 (1096-1174)||(50052723-50052800)
chr3 (1070-1171)||(34659161-34659261)
[»] chr7 (38 HSPs)
chr7 (566-1037)||(14971988-14972444)
chr7 (566-1037)||(15401464-15401920)
chr7 (1057-1176)||(25620190-25620309)
chr7 (1057-1174)||(21861350-21861467)
chr7 (1057-1176)||(33834245-33834364)
chr7 (1057-1176)||(1596647-1596766)
chr7 (1061-1176)||(29469659-29469774)
chr7 (1057-1193)||(36277137-36277273)
chr7 (1049-1149)||(44874481-44874581)
chr7 (1057-1176)||(3519950-3520069)
chr7 (1057-1176)||(4886383-4886502)
chr7 (1057-1170)||(22574661-22574774)
chr7 (1057-1173)||(2404319-2404435)
chr7 (1057-1175)||(33996225-33996340)
chr7 (1049-1157)||(35308379-35308487)
chr7 (1057-1157)||(20305363-20305467)
chr7 (1068-1155)||(36993230-36993317)
chr7 (1049-1184)||(5871714-5871850)
chr7 (1049-1175)||(31485562-31485688)
chr7 (1049-1157)||(5871858-5871967)
chr7 (1082-1187)||(21821849-21821954)
chr7 (1100-1176)||(4506986-4507062)
chr7 (691-783)||(9688249-9688340)
chr7 (1096-1176)||(10882189-10882269)
chr7 (1068-1176)||(26561995-26562103)
chr7 (1060-1162)||(37923398-37923500)
chr7 (1078-1154)||(30727286-30727363)
chr7 (1068-1176)||(31257189-31257297)
chr7 (1068-1176)||(34027447-34027555)
chr7 (1058-1129)||(1936260-1936330)
chr7 (340-411)||(14971774-14971843)
chr7 (340-411)||(15401250-15401319)
chr7 (1068-1193)||(2544371-2544494)
chr7 (955-1013)||(9688010-9688068)
chr7 (1091-1145)||(9689045-9689099)
chr7 (1089-1175)||(10903140-10903226)
chr7 (1067-1141)||(32278992-32279066)
chr7 (1096-1176)||(26239865-26239946)
[»] chr2 (39 HSPs)
chr2 (693-1032)||(19391880-19392214)
chr2 (46-267)||(26022655-26022875)
chr2 (1057-1176)||(14466321-14466440)
chr2 (1049-1176)||(16419321-16419448)
chr2 (1057-1206)||(15124694-15124843)
chr2 (1061-1176)||(93269-93384)
chr2 (1057-1176)||(2029823-2029942)
chr2 (1057-1174)||(40149147-40149264)
chr2 (1057-1149)||(34893506-34893598)
chr2 (1057-1176)||(16533366-16533485)
chr2 (1057-1176)||(40379355-40379474)
chr2 (1078-1176)||(36352091-36352189)
chr2 (1078-1176)||(93559-93657)
chr2 (1057-1145)||(37812414-37812502)
chr2 (1078-1173)||(2375095-2375190)
chr2 (1057-1176)||(17719454-17719573)
chr2 (1067-1161)||(42895316-42895411)
chr2 (1068-1176)||(2324294-2324402)
chr2 (1057-1176)||(5711585-5711705)
chr2 (1061-1173)||(13250172-13250284)
chr2 (1057-1193)||(24395900-24396036)
chr2 (1086-1174)||(5594083-5594172)
chr2 (1057-1142)||(18607155-18607240)
chr2 (1049-1149)||(19110323-19110424)
chr2 (1068-1176)||(5509133-5509241)
chr2 (1057-1112)||(21383436-21383491)
chr2 (1049-1175)||(32356440-32356564)
chr2 (1089-1174)||(38629897-38629983)
chr2 (1057-1145)||(44404072-44404162)
chr2 (1068-1145)||(27038603-27038680)
chr2 (1093-1155)||(7748069-7748132)
chr2 (1133-1176)||(10571024-10571067)
chr2 (1057-1176)||(15461028-15461147)
chr2 (1108-1151)||(26237151-26237194)
chr2 (1113-1176)||(29718382-29718445)
chr2 (1057-1144)||(30701169-30701256)
chr2 (1107-1157)||(43319751-43319802)
chr2 (1078-1170)||(21383601-21383694)
chr2 (1068-1145)||(36316207-36316284)
[»] chr4 (43 HSPs)
chr4 (697-1013)||(28801727-28802041)
chr4 (1057-1176)||(35819039-35819158)
chr4 (1057-1176)||(22231219-22231338)
chr4 (1057-1157)||(28245672-28245772)
chr4 (1061-1174)||(4645698-4645811)
chr4 (1057-1176)||(40717352-40717471)
chr4 (1057-1176)||(35788713-35788833)
chr4 (1068-1175)||(6218259-6218366)
chr4 (1049-1176)||(11036649-11036776)
chr4 (1082-1176)||(34357966-34358060)
chr4 (1080-1157)||(21646435-21646512)
chr4 (1077-1173)||(7926385-7926481)
chr4 (1057-1176)||(35796888-35797007)
chr4 (1057-1175)||(50543476-50543596)
chr4 (1068-1176)||(14783109-14783217)
chr4 (1089-1177)||(30530105-30530193)
chr4 (1068-1171)||(4905658-4905761)
chr4 (1068-1193)||(9685435-9685560)
chr4 (1111-1176)||(17111617-17111682)
chr4 (1068-1176)||(12869185-12869293)
chr4 (691-783)||(13554626-13554717)
chr4 (1067-1150)||(26549503-26549587)
chr4 (1057-1145)||(27634227-27634315)
chr4 (1050-1145)||(35645304-35645399)
chr4 (1050-1145)||(35645593-35645688)
chr4 (1068-1187)||(53828445-53828564)
chr4 (1069-1155)||(36686064-36686150)
chr4 (1057-1126)||(12005620-12005689)
chr4 (1068-1176)||(40716542-40716651)
chr4 (1056-1176)||(21750187-21750307)
chr4 (1089-1148)||(6666762-6666821)
chr4 (955-1013)||(13554387-13554445)
chr4 (1091-1145)||(13555422-13555476)
chr4 (1089-1195)||(32002358-32002463)
chr4 (1138-1176)||(41853428-41853466)
chr4 (1105-1186)||(51695974-51696056)
chr4 (1094-1131)||(8902727-8902764)
chr4 (1100-1149)||(9908785-9908834)
chr4 (1049-1194)||(22445488-22445633)
chr4 (1115-1183)||(24513328-24513397)
chr4 (1057-1126)||(25324180-25324249)
chr4 (1057-1176)||(52559621-52559742)
chr4 (1096-1193)||(53814879-53814976)
[»] chr5 (33 HSPs)
chr5 (691-1037)||(20065184-20065528)
chr5 (110-261)||(24511845-24511995)
chr5 (1067-1176)||(17150389-17150498)
chr5 (1049-1176)||(24346639-24346767)
chr5 (1057-1176)||(15480376-15480495)
chr5 (1057-1176)||(18333610-18333729)
chr5 (1049-1176)||(43117701-43117828)
chr5 (1057-1171)||(95412-95526)
chr5 (1049-1157)||(24270008-24270117)
chr5 (1057-1193)||(25258212-25258348)
chr5 (1057-1193)||(25322002-25322138)
chr5 (1057-1176)||(41666903-41667023)
chr5 (1057-1176)||(6919340-6919459)
chr5 (1049-1176)||(9368649-9368776)
chr5 (56-253)||(25917749-25917945)
chr5 (1049-1176)||(32908855-32908982)
chr5 (1057-1187)||(24531642-24531772)
chr5 (1096-1193)||(2063684-2063781)
chr5 (1057-1155)||(20510788-20510885)
chr5 (1057-1171)||(26137255-26137370)
chr5 (1049-1126)||(13700728-13700805)
chr5 (1057-1157)||(6413568-6413668)
chr5 (1068-1176)||(8098371-8098479)
chr5 (1082-1148)||(411660-411726)
chr5 (1078-1176)||(11896614-11896712)
chr5 (1057-1141)||(11896302-11896386)
chr5 (41-121)||(19220924-19221004)
chr5 (1057-1144)||(8081260-8081347)
chr5 (42-141)||(24660058-24660157)
chr5 (1102-1148)||(30770226-30770272)
chr5 (1057-1154)||(17352580-17352676)
chr5 (1115-1176)||(24528594-24528655)
chr5 (1068-1157)||(27133149-27133238)
[»] chr6 (35 HSPs)
chr6 (684-798)||(24000141-24000254)
chr6 (1057-1176)||(13353255-13353374)
chr6 (1057-1176)||(33796380-33796499)
chr6 (684-798)||(23998777-23998890)
chr6 (684-798)||(23999459-23999572)
chr6 (684-786)||(23986552-23986653)
chr6 (1057-1176)||(12330090-12330209)
chr6 (1057-1151)||(30505581-30505675)
chr6 (1057-1176)||(4868723-4868843)
chr6 (1056-1176)||(6237617-6237737)
chr6 (1057-1176)||(6542854-6542973)
chr6 (1049-1155)||(33631708-33631814)
chr6 (1057-1193)||(3680049-3680185)
chr6 (1057-1145)||(17147806-17147894)
chr6 (1057-1176)||(33494593-33494712)
chr6 (1067-1185)||(32290773-32290891)
chr6 (1057-1157)||(6400766-6400865)
chr6 (1052-1176)||(7638754-7638878)
chr6 (1086-1188)||(8001489-8001592)
chr6 (863-930)||(23986099-23986166)
chr6 (1049-1175)||(24554172-24554297)
chr6 (1059-1161)||(30849315-30849417)
chr6 (1067-1184)||(3921604-3921720)
chr6 (1068-1173)||(19712773-19712878)
chr6 (1068-1176)||(8026443-8026550)
chr6 (1089-1176)||(11085635-11085722)
chr6 (1057-1176)||(13740735-13740854)
chr6 (1057-1176)||(13746235-13746354)
chr6 (1068-1187)||(21690765-21690884)
chr6 (1089-1158)||(27993584-27993654)
chr6 (1079-1176)||(30256632-30256729)
chr6 (1057-1141)||(31961032-31961116)
chr6 (1067-1193)||(9705057-9705184)
chr6 (1068-1157)||(5572538-5572627)
chr6 (1131-1184)||(10145735-10145788)
[»] chr1 (33 HSPs)
chr1 (1058-1176)||(30369889-30370007)
chr1 (1057-1185)||(38668170-38668298)
chr1 (1049-1176)||(4112909-4113036)
chr1 (691-1038)||(18578537-18578874)
chr1 (1057-1176)||(35772083-35772202)
chr1 (1057-1187)||(16162976-16163106)
chr1 (1050-1176)||(51460346-51460472)
chr1 (1057-1154)||(4112686-4112783)
chr1 (1089-1174)||(38733207-38733292)
chr1 (1068-1176)||(31496293-31496401)
chr1 (1057-1176)||(4098314-4098433)
chr1 (1057-1176)||(26176962-26177081)
chr1 (1061-1187)||(27413390-27413516)
chr1 (1061-1176)||(33156787-33156903)
chr1 (1057-1176)||(39348263-39348382)
chr1 (1057-1140)||(25713248-25713331)
chr1 (1056-1154)||(7307797-7307895)
chr1 (1049-1151)||(52961426-52961528)
chr1 (1096-1174)||(5109306-5109384)
chr1 (1057-1154)||(2859538-2859635)
chr1 (1057-1146)||(369714-369805)
chr1 (1101-1176)||(8870865-8870940)
chr1 (1049-1176)||(25145623-25145750)
chr1 (1068-1187)||(51589849-51589968)
chr1 (1057-1151)||(26229645-26229739)
chr1 (1115-1176)||(17402636-17402697)
chr1 (1096-1157)||(32783231-32783292)
chr1 (1099-1176)||(51460003-51460080)
chr1 (1108-1176)||(17452790-17452858)
chr1 (1068-1176)||(51589046-51589154)
chr1 (41-123)||(25220389-25220471)
chr1 (1049-1123)||(39100453-39100527)
chr1 (1060-1145)||(40524789-40524874)
[»] scaffold0692 (1 HSPs)
scaffold0692 (1057-1176)||(5665-5784)
[»] scaffold0519 (1 HSPs)
scaffold0519 (1057-1176)||(1970-2089)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1052-1187)||(41112-41247)
[»] chr8 (38 HSPs)
chr8 (1057-1176)||(11232340-11232459)
chr8 (1057-1176)||(20301315-20301434)
chr8 (1057-1176)||(21087947-21088066)
chr8 (1049-1184)||(31197661-31197795)
chr8 (1057-1175)||(8084182-8084300)
chr8 (1057-1149)||(18004240-18004332)
chr8 (1057-1176)||(3157470-3157589)
chr8 (1057-1176)||(41790712-41790831)
chr8 (1057-1174)||(37868494-37868611)
chr8 (1057-1176)||(39052840-39052959)
chr8 (1057-1157)||(20094706-20094806)
chr8 (1111-1175)||(27439512-27439576)
chr8 (1057-1176)||(5932095-5932214)
chr8 (1047-1157)||(5675957-5676067)
chr8 (1052-1154)||(7669495-7669597)
chr8 (1078-1176)||(24532353-24532451)
chr8 (1049-1151)||(35682919-35683021)
chr8 (1060-1171)||(12688131-12688242)
chr8 (1068-1174)||(12317102-12317208)
chr8 (1057-1154)||(10615470-10615567)
chr8 (952-1033)||(14757707-14757788)
chr8 (1057-1173)||(31079486-31079602)
chr8 (1068-1176)||(34842732-34842840)
chr8 (693-835)||(14757464-14757605)
chr8 (1057-1176)||(15042795-15042916)
chr8 (1079-1176)||(19256753-19256850)
chr8 (1078-1154)||(26208180-26208257)
chr8 (1077-1175)||(37001281-37001382)
chr8 (1089-1187)||(10614882-10614980)
chr8 (1114-1176)||(11232162-11232224)
chr8 (1068-1118)||(34842962-34843012)
chr8 (1068-1176)||(4828122-4828230)
chr8 (1080-1154)||(9397808-9397882)
chr8 (1068-1118)||(19472406-19472456)
chr8 (1068-1118)||(19543331-19543381)
chr8 (1068-1118)||(19589315-19589365)
chr8 (1067-1145)||(29907867-29907945)
chr8 (1055-1187)||(8716157-8716290)
[»] scaffold0047 (1 HSPs)
scaffold0047 (1049-1193)||(12684-12828)
[»] scaffold0129 (1 HSPs)
scaffold0129 (1061-1176)||(14357-14472)
[»] scaffold0048 (1 HSPs)
scaffold0048 (1096-1195)||(81877-81976)
[»] scaffold0400 (1 HSPs)
scaffold0400 (1067-1176)||(3899-4008)
[»] scaffold0365 (1 HSPs)
scaffold0365 (1067-1176)||(4543-4652)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1068-1176)||(56513-56621)
[»] scaffold0083 (1 HSPs)
scaffold0083 (1057-1148)||(51355-51446)
[»] scaffold0459 (1 HSPs)
scaffold0459 (1057-1145)||(13181-13271)
[»] scaffold0366 (2 HSPs)
scaffold0366 (1057-1145)||(10822-10912)
scaffold0366 (1057-1145)||(14488-14578)
[»] scaffold0542 (1 HSPs)
scaffold0542 (1057-1126)||(5733-5802)
[»] scaffold0092 (1 HSPs)
scaffold0092 (1096-1176)||(5709-5789)


Alignment Details
Target: chr3 (Bit Score: 481; Significance: 0; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 481; E-Value: 0
Query Start/End: Original strand, 462 - 1041
Target Start/End: Complemental strand, 21389730 - 21389152
Alignment:
Q  462 acaaggacatcatccaaccatttctccctcctttgaaaacgtcaaaa-ggatagtaaccaacacaagtaatttaagtaaaataagtggacaattacaagt 560  Q
    ||||||||| ||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21389730 acaaggacaccatccaaccatttcttccccctttgaaaacgtcaaaaaggatagtaaccaacacaagtaatttaagtaaaataagtggacaattacaagt 21389631  T
Q  561 tatagcaacacaagtaacaatcgcaattgaaaataagtgaacatgcaaatgtaagcacacaagataaggatacgcatgtaagaaacttgaattaatgaaa 660  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21389630 tataacaacacaagtaacaatcgcaattgaaaacaagtgaacatgcaaatgtaagcacacaagataaggatacgcatgtaagaaacttgaattaatgaaa 21389531  T
Q  661 atagattaaggagaataaataaaaagaagctcttgcttatttaaagcaagaggtatccaagatatctagtttcctacggatttttgagaaaagacttgga 760  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||| |||    
T  21389530 atagattaaggagaataaataaaaagaagctcttgcttatttaaagcaagaggtatccaagatacctaatttcctacgga-ttttgagaaaagactcgga 21389432  T
Q  761 tggtagtggttttgtaaaaatgtcagcaagctgattttttgtgtcaacgtactcgaatgttacatccttcttttcaacatgatctctgaggaagtgatgc 860  Q
    |||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||     
T  21389431 tggtagtggttttgtaaaaaagtcagcaagctgacttttagtgtcaacgtactcgaacgttacatccttcttttcaacatgatccctgaggaagtgatgt 21389332  T
Q  861 caaatctcagtatgcttagtctttgaatgtaaggctgggtttttggtgagatttatagcactagtgttataacaattagattgaaatgcatcctagtttt 960  Q
    ||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  21389331 caaatctcagtatgcttagtctttgaatgtaacactggatttttggtgagatttatagcactagcgttataac-attagattgaaatgcatcctagtttt 21389233  T
Q  961 aaatcatagtcaaggagttgttgtttgatccataaaatttgtgagcaacaactcctggctaccacatattcagcctctgcg 1041  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  21389232 aaatcatagtcaaggagttgttgtttgatccataaaatttgtgagcaacaactcccggctaccacatattcagcctctgcg 21389152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 27 - 271
Target Start/End: Complemental strand, 21393221 - 21392977
Alignment:
Q  27 aattcaagaaaagttgaatcgattcagtagtgatacgtttcaaaaacttttgaattgtaccatttgaagtcagaaacttctaatgatacgattcaaacac 126  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21393221 aattcaagaaaagttgaatcgattcagtagtgatatgtttcaaaaacttttgaattgtaccatttgaagtcagaaacttctgatgatacgattcaaacac 21393122  T
Q  127 tggtgaatcgattcatacactgaaaaatgatgaataaggctaagttccatatatgtgaacaatgcacaagacaccaatgaatcctaggtcaatgagacat 226  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  21393121 tggtgaatcgattcagacactgaaaaatgatgaataaggctaagttccatatgtgtgaacaatgcacaagacaccaatgaatcctaggtcaatgagacat 21393022  T
Q  227 agttgctaggtgatgtaacatgactatatgctagagaacaaggag 271  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  21393021 agttgctaggtgatttaacatgactatatgctagagaacaaggag 21392977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 144; E-Value: 4e-75
Query Start/End: Original strand, 674 - 1037
Target Start/End: Complemental strand, 11646074 - 11645713
Alignment:
Q  674 aataaataaaaagaagctcttgcttatttaaagcaagaggtatccaagatatctagtttcctacggatttttgagaaaagacttggatggtagtggtttt 773  Q
    |||| |||| ||||| ||||||||||||||| ||||||||||||||||||| |||||| |||| |||    ||||||||||||  ||||| || ||||||    
T  11646074 aatatataagaagaaactcttgcttatttaaggcaagaggtatccaagatacctagttccctatgga-ccatgagaaaagactcagatggaagaggtttt 11645976  T
Q  774 gtaaaaatgtcagcaagctgattttttgtgtcaacgtactcgaatgttacatccttcttttcaacatgatctctgaggaagtgatgccaaatctcagtat 873  Q
    |||||||||||| |||| ||| ||||  ||||||| ||| | || |||||||||||||||||||||||||| ||  |||| ||||||| |||| ||  ||    
T  11645975 gtaaaaatgtcatcaagttgacttttaatgtcaacatacgcaaacgttacatccttcttttcaacatgatccctacggaaatgatgccgaatcacaaaat 11645876  T
Q  874 gcttagtctttgaatgtaaggctgggtttttggtgagatttatagcactagtgttataacaattagattgaaatgcatcctagttttaaatcatagtcaa 973  Q
    | |||||| ||||||||||| ||||||||||||| ||||| ||||||||| |||| | || ||| ||||| ||  || ||||||||||||||||||||||    
T  11645875 gtttagtccttgaatgtaagactgggtttttggtaagattaatagcactaatgttgtcac-atttgattggaacacaacctagttttaaatcatagtcaa 11645777  T
Q  974 ggagttgttgtttgatccataaaatttgtgagcaacaactcctggctaccacatattcagcctc 1037  Q
    ||||||||||||| ||| ||||||||||  |||||||||||| | || ||||||||||||||||    
T  11645776 ggagttgttgtttaatctataaaatttgacagcaacaactcccgactgccacatattcagcctc 11645713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 124; E-Value: 4e-63
Query Start/End: Original strand, 1050 - 1249
Target Start/End: Complemental strand, 21387275 - 21387076
Alignment:
Q  1050 attgagtttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatctta 1149  Q
    ||||||||||||||||||||||||||| |||||| | |||||||||||||||||||| ||||| || | |||||||||||||||||||||||||||||||    
T  21387275 attgagtttggttcgttgacataaatagtgggtgactcaatagcgaaaacctgataataggtggcctactggatcttagagagactctgataccatctta 21387176  T
Q  1150 aaaatcgtaattgagcctaacacaaccatacaaaatcgaattgtaaaatgcagattgttttcatttataaatacatgttcagaccatcttttatttgatg 1249  Q
    |||||||||||| ||||||| ||   | ||||||| || |||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||| ||||    
T  21387175 aaaatcgtaattaagcctaatacggtcctacaaaaccggattgtaaagtgcagattgttctcatttataaacacatgttcagaccatcttttattcgatg 21387076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 332 - 469
Target Start/End: Complemental strand, 21392915 - 21392779
Alignment:
Q  332 ttatataagctttaatctccctctttttgatgatctcaaaacaagttgatgatgtgatagctcccccttaaacatagcattcaaaagaaacagcaaacac 431  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  21392915 ttatataagcttcaatctccctctttttgatgctctcaaaacaagttgatgatgtgatagctccccctgaaacatagcattcaaaagaaacagcaaacac 21392816  T
Q  432 aagcaatagaaagaaacatagggaaatagcacaaggac 469  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  21392815 aagcaatagaaagaaacataggg-aatagcacaaggac 21392779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 2e-37
Query Start/End: Original strand, 54 - 266
Target Start/End: Complemental strand, 16973551 - 16973340
Alignment:
Q  54 tagtgatacgtttcaaaaacttttgaattgtaccatttgaagtcagaaacttctaatgatacgattcaaacactggtgaatcgattcatacactgaaaaa 153  Q
    |||||||||  ||||||| ||| ||||| |   |||| ||||||||| |||||| |||||| |||||||||||| |||||| |||| | ||||| |||||    
T  16973551 tagtgatacaattcaaaagcttgtgaatcgattcattagaagtcagagacttctgatgatatgattcaaacactagtgaattgattaagacact-aaaaa 16973453  T
Q  154 tgatgaataaggctaagttccatatatgtgaacaatgcacaagacaccaatgaatcctaggtcaatgagacatagttgctaggtgatgtaacatgactat 253  Q
     |   | |  ||||||||| ||||||||||||||||||||| |||||||||||||||| || ||||||||||||| ||||||||| | ||| ||||||||    
T  16973452 ggtaaattttggctaagtttcatatatgtgaacaatgcacatgacaccaatgaatcctgggacaatgagacatagatgctaggtgctttaatatgactat 16973353  T
Q  254 atgctagagaaca 266  Q
    |||||||||||||    
T  16973352 atgctagagaaca 16973340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 1e-35
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 25921426 - 25921179
Alignment:
Q  18 ccatgatacaattcaagaaaagttgaatcgattcagtagtgatacgtttcaaaaacttttgaattgtaccatttgaagtcagaaacttctaatgatacga 117  Q
    ||||||||| ||||| | ||| |||||||||||  || |||||||| ||||||||||| |||||  || |||| | ||||||| |||||| |||||||||    
T  25921426 ccatgatacgattcaggcaaacttgaatcgattatgttgtgatacgattcaaaaacttgtgaatcatatcattggcagtcagagacttctgatgatacga 25921327  T
Q  118 ttcaaacactggtgaatcgattcatacactga-aaaatgatga-ataaggctaagttccatatatgtgaacaatgcacaagacaccaatgaatcctaggt 215  Q
    | ||| ||||||||||| |||| |     ||| |||| ||||| ||  ||||||||| || |||||| ||||||||||| ||||  |||||||||||||     
T  25921326 t-caaccactggtgaattgatttagg---tgataaaaagatgagatttggctaagtttcaaatatgtaaacaatgcacatgacattaatgaatcctagga 25921231  T
Q  216 caatgagacatagttgctaggtgatgtaacatgactatatgctagagaacaa 267  Q
    ||||||||||||||||||||||| | |||||||||||||||||||| |||||    
T  25921230 caatgagacatagttgctaggtgctttaacatgactatatgctagaaaacaa 25921179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Complemental strand, 4155497 - 4155378
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| ||||||||   |||||||||| |||||| |||||||||| |||||| ||||||| ||||| |||||||||||||||||||||| ||||||    
T  4155497 ttggttcgtcgacataaacggtgggtggcccgatagcggaaacctgatagcaggtggcccaatgaatcttggagagactctgataccatcttagaaatcg 4155398  T
Q  1157 taattgagcctaacacaacc 1176  Q
    |  ||| |||||||||||||    
T  4155397 tggttgggcctaacacaacc 4155378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 1098 - 1176
Target Start/End: Original strand, 16926901 - 16926979
Alignment:
Q  1098 acctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 1176  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||  |||||| ||||||||||    
T  16926901 acctgataacaggtgacccaatggatcttgaagagactctgataccatcttagaaatcgtggttgagcttaacacaacc 16926979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Original strand, 20327760 - 20327879
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||| | |||||||||  |||||||||| |||||| |||||||||| |||||| |||||||||| |||||||| | |||||||||| ||| |||||     
T  20327760 ttggttcctggacataaatggtgggtggcccgatagcggaaacctgatagcaggtggcccaatggattttagagaggcactgataccatattagaaatca 20327859  T
Q  1157 taattgagcctaacacaacc 1176  Q
    |  ||| |||||||||||||    
T  20327860 tggttgggcctaacacaacc 20327879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 1057 - 1152
Target Start/End: Complemental strand, 34992779 - 34992684
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaa 1152  Q
    ||||||||| |||||||||  |||||| ||| | |||| |||||||||| |||||| ||||||||| ||| |||||||||||||||||||||||||    
T  34992779 ttggttcgtggacataaatggtgggtgacccgacagcggaaacctgatagcaggtggcccaatggaccttggagagactctgataccatcttaaaa 34992684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Original strand, 20303296 - 20303415
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  ||||||| || |||| | |||||||||| |||||| |||||||||| |||||||| |||||||||||| ||| |||| |    
T  20303296 ttggttcgtggacataaatggtgggtggaccgatagtggaaacctgatagcaggtggcccaatggattttagagaggctctgataccatattagaaattg 20303395  T
Q  1157 taattgagcctaacacaacc 1176  Q
    |  |||  ||||||||||||    
T  20303396 tggttggacctaacacaacc 20303415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Original strand, 35038340 - 35038458
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  ||||||||| | ||||| |||||||||  |||||| ||||||||||||| ||||| | |||||||||||||| || |||    
T  35038340 ttggttcgtggacataaatggtgggtggccga-tagcggaaacctgattgcaggtggcccaatggatcttggagaggcactgataccatcttagaagtcg 35038438  T
Q  1157 taattgagcctaacacaacc 1176  Q
    |  ||| |||||||||||||    
T  35038439 tggttgggcctaacacaacc 35038458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 1049 - 1174
Target Start/End: Complemental strand, 16239773 - 16239647
Alignment:
Q  1049 tattgagtttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagag-agactctgataccatct 1147  Q
    ||||||| ||||||||| |||||||||  |||||||| | ||| || |||||||||| |||||| || || ||||||| ||| || ||||||||||||||    
T  16239773 tattgagcttggttcgtggacataaatggtgggtggctcgataacggaaacctgatagcaggtggccaaacggatcttggaggaggctctgataccatct 16239674  T
Q  1148 taaaaatcgtaattgagcctaacacaa 1174  Q
    || |||||||  ||| |||||||||||    
T  16239673 tagaaatcgtggttgggcctaacacaa 16239647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 1090 - 1176
Target Start/End: Complemental strand, 54568032 - 54567946
Alignment:
Q  1090 tagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 1176  Q
    ||||| |||||||||| |||||| | ||||||||||| ||||| |||||||||||||||| |||||||  ||| |||||||||||||    
T  54568032 tagcggaaacctgatagcaggtggctcaatggatcttggagaggctctgataccatcttagaaatcgtggttgggcctaacacaacc 54567946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1049 - 1174
Target Start/End: Complemental strand, 31317412 - 31317284
Alignment:
Q  1049 tattgagtttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttag-agagactctgat---acca 1144  Q
    ||||||||||||||||| |||||||||  |||||||||| ||| | |||||||||||  |||||  |||| ||||||| | ||||||||||||   ||||    
T  31317412 tattgagtttggttcgtggacataaatggtgggtggcccgataac-aaaacctgatagtaggtggtccaacggatcttggaagagactctgataccacca 31317314  T
Q  1145 tcttaaaaatcgtaattgagcctaacacaa 1174  Q
    ||||| |||||||  |||||||||||||||    
T  31317313 tcttagaaatcgtggttgagcctaacacaa 31317284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 1057 - 1175
Target Start/End: Original strand, 37246764 - 37246882
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    |||||||||||||||||||  ||| || ||| ||| ||||||||| ||| ||||||  |||||| |||||  | ||||| |||||||||||||||||||     
T  37246764 ttggttcgttgacataaatggtggatgacccgataacgaaaacctaatagcaggtggtccaatgaatcttgaatagactttgataccatcttaaaaatca 37246863  T
Q  1157 taattgagcctaacacaac 1175  Q
    |  ||||| ||||||||||    
T  37246864 ttgttgagtctaacacaac 37246882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 1067 - 1176
Target Start/End: Complemental strand, 45828182 - 45828073
Alignment:
Q  1067 gacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcc 1166  Q
    |||||||||  |||||||| | |||||| ||||||| || |||||| | ||||||||||| ||||| |||||||||||||||| |||| ||  | | |||    
T  45828182 gacataaatggtgggtggctcgatagcggaaacctggtagcaggtggcgcaatggatcttggagaggctctgataccatcttagaaattgtggtagggcc 45828083  T
Q  1167 taacacaacc 1176  Q
    ||||||||||    
T  45828082 taacacaacc 45828073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1068 - 1176
Target Start/End: Original strand, 1722998 - 1723106
Alignment:
Q  1068 acataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcct 1167  Q
    |||||||| | ||||||||| ||| || ||||||||||||||||| |||||   ||| |  |||| |||||||||||||||| |||||||  ||| ||||    
T  1722998 acataaatgacgggtggcccgataacggaaacctgataacaggtggcccaaacaatcgtgaagaggctctgataccatcttagaaatcgtggttgggcct 1723097  T
Q  1168 aacacaacc 1176  Q
    |||||||||    
T  1723098 aacacaacc 1723106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1057 - 1145
Target Start/End: Original strand, 19954363 - 19954451
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccat 1145  Q
    ||||||||| |||||||||  ||||||| |  ||||||||||||||||| ||| || |||||||||||||  |||| ||||||||||||    
T  19954363 ttggttcgtggacataaatggtgggtggtcagatagcgaaaacctgatagcagatggcccaatggatcttgaagaggctctgataccat 19954451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1068 - 1148
Target Start/End: Complemental strand, 46139424 - 46139344
Alignment:
Q  1068 acataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatctt 1148  Q
    ||||||||  |||||||||| |||||  |||||||||| |||||||||||||||||||| |||||  ||| ||||||||||    
T  46139424 acataaatggtgggtggcccgatagcagaaacctgatagcaggtgacccaatggatcttggagaggatctaataccatctt 46139344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1053 - 1141
Target Start/End: Original strand, 52724128 - 52724216
Alignment:
Q  1053 gagtttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgata 1141  Q
    ||||||||||| | |||||||||  |||||||||| ||||||||||||||||| || ||||||||||| || ||  |||| ||||||||    
T  52724128 gagtttggttcatggacataaatggtgggtggcccgatagcgaaaacctgatagcatgtgacccaatgaatgttgaagaggctctgata 52724216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1057 - 1123
Target Start/End: Original strand, 20303210 - 20303276
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggat 1123  Q
    ||||||||| |||||||||  ||||||| || |||||| |||||||||| |||||||||||||||||    
T  20303210 ttggttcgtggacataaatggtgggtggaccgatagcggaaacctgatagcaggtgacccaatggat 20303276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1080 - 1176
Target Start/End: Complemental strand, 11589935 - 11589839
Alignment:
Q  1080 ggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 1176  Q
    |||| ||||||| || ||||||||||||||||| ||||| | ||| |  |||| |||||||||||| ||| |||||||  ||| |||||||||||||    
T  11589935 ggtgacccaataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatattagaaatcgtggttgggcctaacacaacc 11589839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Original strand, 13574831 - 13574951
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatctt-agagagactctgataccatcttaaaaatc 1155  Q
    ||||||||| |||||||||  |||||| | | |||||| |||||||||| |||||| ||||||||||||| |  ||| || ||||||||| ||| ||||     
T  13574831 ttggttcgtggacataaatggtgggtgacacgatagcggaaacctgatagcaggtggcccaatggatcttaactgaggctttgataccatattagaaatt 13574930  T
Q  1156 gtaattgagcctaacacaacc 1176  Q
    ||  ||| |||||||||||||    
T  13574931 gtggttgggcctaacacaacc 13574951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1067 - 1150
Target Start/End: Original strand, 21809061 - 21809145
Alignment:
Q  1067 gacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatctt-agagagactctgataccatcttaa 1150  Q
    ||||||||| |||||| | || |||||| |||||||||| |||||||||||||||||||| |   || |||||||||||||||||    
T  21809061 gacataaatgatgggtagtccgatagcggaaacctgatagcaggtgacccaatggatcttgaaccaggctctgataccatcttaa 21809145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1096 - 1176
Target Start/End: Complemental strand, 49629739 - 49629659
Alignment:
Q  1096 aaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 1176  Q
    |||||||||| ||||||  ||||||||||||  |||| |||| ||||||| |||||||| ||||||| | |||||||||||    
T  49629739 aaacctgatagcaggtggtccaatggatcttgaagaggctctaataccattttaaaaatggtaattgggtctaacacaacc 49629659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1089 - 1187
Target Start/End: Original strand, 40765878 - 40765977
Alignment:
Q  1089 atagcgaaaacctgataacaggtgacccaatggatcttaga-gagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaatcg 1187  Q
    ||||||| ||| ||||| || ||||| |||  ||||||||| |||||||||||||||||||||||||  |  |||||||||||||||   ||||||||||    
T  40765878 atagcgataacttgatagcatgtgactcaacagatcttagatgagactctgataccatcttaaaaattatgtttgagcctaacacaattctacaaaatcg 40765977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1057 - 1195
Target Start/End: Original strand, 8142558 - 8142696
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  ||||||| |  || | | ||| |||||| ||| ||||| ||||||| ||| |||| |||||||||||||||| ||||||    
T  8142558 ttggttcgtggacataaatggtgggtggtctgattgaggaaatctgatagcagatgacctaatggattttaaagaggctctgataccatcttagaaatcg 8142657  T
Q  1157 taattgagcctaacacaaccatacaaaatcgaattgtaa 1195  Q
    |  ||   ||||||||||||  |||||| ||| ||||||    
T  8142658 tggttagacctaacacaaccccacaaaaccgatttgtaa 8142696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 267
Target Start/End: Original strand, 24699438 - 24699484
Alignment:
Q  221 agacatagttgctaggtgatgtaacatgactatatgctagagaacaa 267  Q
    |||||||||||||||||||| |||||||||| ||||||| |||||||    
T  24699438 agacatagttgctaggtgatttaacatgactttatgctatagaacaa 24699484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1131 - 1174
Target Start/End: Complemental strand, 39269430 - 39269387
Alignment:
Q  1131 agactctgataccatcttaaaaatcgtaattgagcctaacacaa 1174  Q
    |||||||||||||||||||||||||||| ||  |||||||||||    
T  39269430 agactctgataccatcttaaaaatcgtagttaggcctaacacaa 39269387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1109 - 1176
Target Start/End: Complemental strand, 54368637 - 54368570
Alignment:
Q  1109 ggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 1176  Q
    |||| |||||||||||||  |||| |||||||||||||||| |||||||  ||| | |||||||||||    
T  54368637 ggtggcccaatggatcttgaagaggctctgataccatcttagaaatcgtggttgggtctaacacaacc 54368570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1067 - 1184
Target Start/End: Original strand, 11659602 - 11659720
Alignment:
Q  1067 gacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttaga-gagactctgataccatcttaaaaatcgtaattgagc 1165  Q
    |||||||||  ||||||| || ||||||||||||||||| |||||   |||| ||||||| || ||| |||| |||| |||||| | |||||  |||||     
T  11659602 gacataaatggtgggtggtccgatagcgaaaacctgatagcaggttgtccaacggatcttggaggaggctctaatacgatcttagacatcgtggttgagt 11659701  T
Q  1166 ctaacacaaccatacaaaa 1184  Q
    ||||| |||| ||||||||    
T  11659702 ctaactcaactatacaaaa 11659720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1130 - 1176
Target Start/End: Complemental strand, 27783158 - 27783112
Alignment:
Q  1130 gagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 1176  Q
    |||||||||||||||||||| ||||| | |||| |||||||||||||    
T  27783158 gagactctgataccatcttagaaatcatgattgggcctaacacaacc 27783112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1080 - 1162
Target Start/End: Original strand, 28087149 - 28087231
Alignment:
Q  1080 ggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattg 1162  Q
    |||||||| ||| || ||||||||||||||||| ||||| | ||| |  |||| ||||| |||||||||| ||||||| ||||    
T  28087149 ggtggcccgataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctctggtaccatcttagaaatcgtgattg 28087231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1096 - 1174
Target Start/End: Original strand, 50052723 - 50052800
Alignment:
Q  1096 aaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaa 1174  Q
    |||||||||| |||||| |||| |||||||||||||| ||||||||| || ||| |||| ||  ||| |||||||||||    
T  50052723 aaacctgatagcaggtggccca-tggatcttagagaggctctgatacaatattagaaatagtggttgggcctaacacaa 50052800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1070 - 1171
Target Start/End: Original strand, 34659161 - 34659261
Alignment:
Q  1070 ataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaa 1169  Q
    |||||| |||||||| || |||| | |||| | ||| || |||  |||| |||||||  |||| ||||||||||||||| ||||||||| ||||||||||    
T  34659161 ataaatgatgggtggtccgatagtggaaacttaatagcatgtggtccaacggatcttgaagaggctctgataccatctt-aaaatcgtagttgagcctaa 34659259  T
Q  1170 ca 1171  Q
    ||    
T  34659260 ca 34659261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 182; Significance: 9e-98; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 182; E-Value: 9e-98
Query Start/End: Original strand, 566 - 1037
Target Start/End: Original strand, 14971988 - 14972444
Alignment:
Q  566 caacacaagtaacaatcgcaattgaaaataagtgaacatgcaaatgtaagcacaca-agataaggatacgcatgtaagaaacttgaattaatgaaaatag 664  Q
    |||||||| | ||||||||||||||||| ||||||||||||||||| |||  || | ||| |||| ||||||||| ||||||||||| || ||||||||     
T  14971988 caacacaatttacaatcgcaattgaaaacaagtgaacatgcaaatgaaagaccaaagagagaaggttacgcatgtgagaaacttgaagtagtgaaaata- 14972086  T
Q  665 attaaggagaataaataaaaagaagctcttgcttatttaaagcaagaggtatccaagatatctagtttcctacggatttttgagaaaagacttggatggt 764  Q
                 ||||| ||||| ||||||||||||||| | ||||||||||||||||| |||||| ||||||||| || |||||||||||||||||||    
T  14972087 -------------aataagaagaaactcttgcttatttaaggaaagaggtatccaagatacctagttccctacggatctt-gagaaaagacttggatggt 14972172  T
Q  765 agtggttttgtaaaaatgtcagcaagctgattttttgtgtcaacgtactcgaatgttacatccttcttttcaacatgatctctgaggaagtgatgccaaa 864  Q
    ||||||||||| ||||| || |||||||||  ||| |||||||| |||||||| ||||||||||||||||||||||| | ||| ||||| ||||| |  |    
T  14972173 agtggttttgtgaaaatatcggcaagctgacctttagtgtcaacatactcgaaagttacatccttcttttcaacatggtttctaaggaaatgatgtcgta 14972272  T
Q  865 tctcagtatgcttagtctttgaatgtaaggctgggtttttggtgagatttatagcactagtgttataacaattagattgaaatgcatcctagttttaaat 964  Q
    ||||| |||  |||||| ||||||||||| || | |||||||||||||| |||||||||||||||| || ||| ||||  ||  || | |||||||||||    
T  14972273 tctcaatatatttagtccttgaatgtaagactagttttttggtgagattaatagcactagtgttatcac-atttgatttgaacacaacttagttttaaat 14972371  T
Q  965 catagtcaaggagttgttgtttgatccataaaatttgtgagcaacaactcctggctaccacatattcagcctc 1037  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| ||||| ||| ||||||||||||||||    
T  14972372 catagtcaaggaggtgttgtttgatccataaaatttgagagcaacagctcctagctgccacatattcagcctc 14972444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 182; E-Value: 9e-98
Query Start/End: Original strand, 566 - 1037
Target Start/End: Original strand, 15401464 - 15401920
Alignment:
Q  566 caacacaagtaacaatcgcaattgaaaataagtgaacatgcaaatgtaagcacaca-agataaggatacgcatgtaagaaacttgaattaatgaaaatag 664  Q
    |||||||| | ||||||||||||||||| ||||||||||||||||| |||  || | ||| |||| ||||||||| ||||||||||| || ||||||||     
T  15401464 caacacaatttacaatcgcaattgaaaacaagtgaacatgcaaatgaaagaccaaagagagaaggttacgcatgtgagaaacttgaagtagtgaaaata- 15401562  T
Q  665 attaaggagaataaataaaaagaagctcttgcttatttaaagcaagaggtatccaagatatctagtttcctacggatttttgagaaaagacttggatggt 764  Q
                 ||||| ||||| ||||||||||||||| | ||||||||||||||||| |||||| ||||||||| || |||||||||||||||||||    
T  15401563 -------------aataagaagaaactcttgcttatttaaggaaagaggtatccaagatacctagttccctacggatctt-gagaaaagacttggatggt 15401648  T
Q  765 agtggttttgtaaaaatgtcagcaagctgattttttgtgtcaacgtactcgaatgttacatccttcttttcaacatgatctctgaggaagtgatgccaaa 864  Q
    ||||||||||| ||||| || |||||||||  ||| |||||||| |||||||| ||||||||||||||||||||||| | ||| ||||| ||||| |  |    
T  15401649 agtggttttgtgaaaatatcggcaagctgacctttagtgtcaacatactcgaaagttacatccttcttttcaacatggtttctaaggaaatgatgtcgta 15401748  T
Q  865 tctcagtatgcttagtctttgaatgtaaggctgggtttttggtgagatttatagcactagtgttataacaattagattgaaatgcatcctagttttaaat 964  Q
    ||||| |||  |||||| ||||||||||| || | |||||||||||||| |||||||||||||||| || ||| ||||  ||  || | |||||||||||    
T  15401749 tctcaatatatttagtccttgaatgtaagactagttttttggtgagattaatagcactagtgttatcac-atttgatttgaacacaacttagttttaaat 15401847  T
Q  965 catagtcaaggagttgttgtttgatccataaaatttgtgagcaacaactcctggctaccacatattcagcctc 1037  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| ||||| ||| ||||||||||||||||    
T  15401848 catagtcaaggaggtgttgtttgatccataaaatttgagagcaacagctcctagctgccacatattcagcctc 15401920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Complemental strand, 25620309 - 25620190
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  ||||||||||||||||| |||||||||| |||||| ||||||||||||| ||||| |||||||||||||||| ||||||    
T  25620309 ttggttcgtggacataaatggtgggtggcccaatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatcttagaaatcg 25620210  T
Q  1157 taattgagcctaacacaacc 1176  Q
    |  ||| |||||||||||||    
T  25620209 tggttgggcctaacacaacc 25620190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 1057 - 1174
Target Start/End: Complemental strand, 21861467 - 21861350
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  |||||||||| |||||| ||||||||||||||||| ||||||||||||| ||||| |||||||||||||||| |||| |    
T  21861467 ttggttcgtggacataaatggtgggtggcccgatagcggaaacctgataacaggtggcccaatggatcttggagaggctctgataccatcttagaaatgg 21861368  T
Q  1157 taattgagcctaacacaa 1174  Q
    |  ||| |||||||||||    
T  21861367 tggttgggcctaacacaa 21861350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Complemental strand, 33834364 - 33834245
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  |||||||||| |||| |||||||||||| |||||| ||||||||||||| ||||| |||||||||||||||| |||| |    
T  33834364 ttggttcgtggacataaatggtgggtggcccgatagggaaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatcttagaaatgg 33834265  T
Q  1157 taattgagcctaacacaacc 1176  Q
    |  ||| |||||||||||||    
T  33834264 tggttgggcctaacacaacc 33834245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Complemental strand, 1596766 - 1596647
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  |||||||||| |||||| ||||||||||||| ||| ||||||||||||| ||||| |||||||||||||||| |||| |    
T  1596766 ttggttcgtggacataaatggtgggtggcccgatagcggaaacctgataacatgtggcccaatggatcttggagaggctctgataccatcttagaaattg 1596667  T
Q  1157 taattgagcctaacacaacc 1176  Q
    |  ||  |||||||||||||    
T  1596666 tggttaggcctaacacaacc 1596647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 1061 - 1176
Target Start/End: Complemental strand, 29469774 - 29469659
Alignment:
Q  1061 ttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaat 1160  Q
    ||||| |||||||||  |||||||||| |||||| || |||||||||||||| ||||||||||||| ||||| |||||||||||| ||| |||||||  |    
T  29469774 ttcgtggacataaatggtgggtggcccgatagcggaagcctgataacaggtggcccaatggatcttggagaggctctgataccatattagaaatcgtggt 29469675  T
Q  1161 tgagcctaacacaacc 1176  Q
    || |||||||||||||    
T  29469674 tgggcctaacacaacc 29469659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 1057 - 1193
Target Start/End: Original strand, 36277137 - 36277273
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  ||||||| || |||||| ||||||||||  ||||| ||||||||||||| ||||| |||||||| ||||||| ||||||    
T  36277137 ttggttcgtggacataaatggtgggtggtccgatagcggaaacctgatagtaggtggcccaatggatcttggagaggctctgataacatcttagaaatcg 36277236  T
Q  1157 taattgagcctaacacaaccatacaaaatcgaattgt 1193  Q
    |  ||| | |||||||||||  |||||||||| ||||    
T  36277237 tggttgggactaacacaaccccacaaaatcgacttgt 36277273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 1049 - 1149
Target Start/End: Original strand, 44874481 - 44874581
Alignment:
Q  1049 tattgagtttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatctt 1148  Q
    ||||| ||||||||||| ||||||||| ||||||| ||| || | | |||||||||| ||||||||||||||||||||  ||||||||||||||||||||    
T  44874481 tattgggtttggttcgtagacataaatgatgggtgacccgattgtggaaacctgatagcaggtgacccaatggatcttgaagagactctgataccatctt 44874580  T
Q  1149 a 1149  Q
    |    
T  44874581 a 44874581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Original strand, 3519950 - 3520069
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  |||||| ||| |||||||||||| |||| |||||| ||||||||||| | ||||| ||||||||||| || | ||||||    
T  3519950 ttggttcgtggacataaatggtgggtgtcccgatagcgaaaaccagatagcaggtggcccaatggatcatggagaggctctgataccaactaagaaatcg 3520049  T
Q  1157 taattgagcctaacacaacc 1176  Q
    |  |||| ||||||||||||    
T  3520050 tggttgaacctaacacaacc 3520069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Complemental strand, 4886502 - 4886383
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  |||||||| | ||||   |||| ||||| |||||| ||||||||||||| ||||||| |||||||||||||| ||||||    
T  4886502 ttggttcgtggacataaatggtgggtggctcgatagtagaaacttgatagcaggtggcccaatggatcttggagagaccctgataccatcttagaaatcg 4886403  T
Q  1157 taattgagcctaacacaacc 1176  Q
    |  ||| |||||||||||||    
T  4886402 tggttgggcctaacacaacc 4886383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 1057 - 1170
Target Start/End: Complemental strand, 22574774 - 22574661
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  ||||||| || |||||  |||||||||| |||||| ||||||||||||| |||||||||| |||||||| || |||| |    
T  22574774 ttggttcgtagacataaatggtgggtggtccgatagctgaaacctgatagcaggtggcccaatggatcttggagagactcttataccatcatagaaattg 22574675  T
Q  1157 taattgagcctaac 1170  Q
    |  |||||||||||    
T  22574674 tggttgagcctaac 22574661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1057 - 1173
Target Start/End: Original strand, 2404319 - 2404435
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| ||||||||   | ||||| ||||||||| |||||||||| ||||||||||||||||| |   |||| |||||||||||||||| ||||||    
T  2404319 ttggttcgtggacataaacggtaggtggtccaatagcggaaacctgatagcaggtgacccaatggatttcgaagaggctctgataccatcttagaaatcg 2404418  T
Q  1157 taattgagcctaacaca 1173  Q
    |  |||||| |||||||    
T  2404419 tggttgagcttaacaca 2404435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1057 - 1175
Target Start/End: Original strand, 33996225 - 33996340
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  |||||||||| || ||| |||||||||| |||||| ||||||||||    ||||| |||||||||||||||| ||||||    
T  33996225 ttggttcgtggacataaatggtgggtggcccgattgcggaaacctgatagcaggtggcccaatggatg---gagaggctctgataccatcttagaaatcg 33996321  T
Q  1157 taattgagcctaacacaac 1175  Q
    |  ||| ||||||||||||    
T  33996322 tggttgggcctaacacaac 33996340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1049 - 1157
Target Start/End: Original strand, 35308379 - 35308487
Alignment:
Q  1049 tattgagtttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatctt 1148  Q
    ||||| ||||||||||| |||||| |  ||||||| ||| ||||||||||||| ||| ||| ||| | |||  |||||| ||||||||||||||||||||    
T  35308379 tattgggtttggttcgtggacatagacgatgggtgacccgatagcgaaaacctaatagcagatgatctaataaatcttaaagagactctgataccatctt 35308478  T
Q  1149 aaaaatcgt 1157  Q
    |||||||||    
T  35308479 aaaaatcgt 35308487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 1057 - 1157
Target Start/End: Complemental strand, 20305467 - 20305363
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgaccca----atggatcttagagagactctgataccatcttaaaa 1152  Q
    ||||||||| |||||||||  |||||||||| |||||| |||||||||| ||| |||||||    |||||||||  |||| |||||||||||||||||||    
T  20305467 ttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatagcagatgacccatccaatggatcttgaagaggctctgataccatcttaaaa 20305368  T
Q  1153 atcgt 1157  Q
    |||||    
T  20305367 atcgt 20305363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1068 - 1155
Target Start/End: Original strand, 36993230 - 36993317
Alignment:
Q  1068 acataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatc 1155  Q
    ||||||||| ||||||| ||||||||| ||| |||||| || ||| |||||||||||||  |||| |||||||||||||||| |||||    
T  36993230 acataaatagtgggtggtccaatagcggaaatctgatagcacgtggcccaatggatcttgaagaggctctgataccatcttagaaatc 36993317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1049 - 1184
Target Start/End: Original strand, 5871714 - 5871850
Alignment:
Q  1049 tattgagtttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatctt-agagagactctgataccatct 1147  Q
    |||||||||||||||||||||||||||  | ||| | || ||||| ||||  |||||  ||||||| ||||||||||| |  ||| |||||||| |||||    
T  5871714 tattgagtttggttcgttgacataaatggtaggtcgtccgatagcaaaaatatgatagtaggtgactcaatggatcttaacggaggctctgatatcatct 5871813  T
Q  1148 taaaaatcgtaattgagcctaacacaaccatacaaaa 1184  Q
    || |||||||  ||| | ||||||||||| |||||||    
T  5871814 tagaaatcgtggttgggactaacacaaccctacaaaa 5871850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1049 - 1175
Target Start/End: Original strand, 31485562 - 31485688
Alignment:
Q  1049 tattgagtttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatctt 1148  Q
    ||||| ||||| ||||| || ||||||  |||||||||| |||| ||||||||||||  ||||| |||||||||||||  || | |||| ||||||||||    
T  31485562 tattgggtttgattcgtggatataaatggtgggtggcccgatagtgaaaacctgatagtaggtggcccaatggatcttgtagcggctcttataccatctt 31485661  T
Q  1149 aaaaatcgtaattgagcctaacacaac 1175  Q
    | |||| ||  ||  ||||||||||||    
T  31485662 agaaattgtggttaggcctaacacaac 31485688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 1049 - 1157
Target Start/End: Original strand, 5871858 - 5871967
Alignment:
Q  1049 tattgagtttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagag-agactctgataccatct 1147  Q
    |||||||||||||||||||||||||||  | ||| | || |||||| |||  ||||| |||||||| ||||||||||||  | || |||||||| |||||    
T  5871858 tattgagtttggttcgttgacataaatggtaggtcgtccgatagcggaaatatgatagcaggtgactcaatggatcttaacgcaggctctgatatcatct 5871957  T
Q  1148 taaaaatcgt 1157  Q
    || |||||||    
T  5871958 tagaaatcgt 5871967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 1082 - 1187
Target Start/End: Complemental strand, 21821954 - 21821849
Alignment:
Q  1082 tggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaaccataca 1181  Q
    ||||||||||||| ||||||| || ||| || ||||| | |||||  |||| |||||||||||||||| |||||||  ||| ||||||||||| |  |||    
T  21821954 tggcccaatagcggaaacctgctagcagttggcccaacgtatcttgaagaggctctgataccatcttagaaatcgtggttgggcctaacacaatcccaca 21821855  T
Q  1182 aaatcg 1187  Q
    ||||||    
T  21821854 aaatcg 21821849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1100 - 1176
Target Start/End: Complemental strand, 4507062 - 4506986
Alignment:
Q  1100 ctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 1176  Q
    |||||| ||||||||||||||||||||  | || ||||||||| |||||| |||||||| ||| | |||||||||||    
T  4507062 ctgatagcaggtgacccaatggatcttgaaaaggctctgatacaatcttagaaatcgtagttgggtctaacacaacc 4506986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 691 - 783
Target Start/End: Complemental strand, 9688340 - 9688249
Alignment:
Q  691 tcttgcttatttaaagcaagaggtatccaagatatctagtttcctacggatttttgagaaaagacttggatggtagtggttttgtaaaaatgt 783  Q
    |||| |||||||||||||||||||||| | |||| |||  | |||||  | ||||||||||| | | ||||||||||||||||||||||||||    
T  9688340 tctttcttatttaaagcaagaggtatctaggatacctaactccctacata-ttttgagaaaataatcggatggtagtggttttgtaaaaatgt 9688249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1096 - 1176
Target Start/End: Original strand, 10882189 - 10882269
Alignment:
Q  1096 aaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 1176  Q
    ||||||||||||||||| ||||| | ||| |  |||| |||||||||||||||| |||||||  ||| |||||||||||||    
T  10882189 aaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatcttagaaatcgtggttgggcctaacacaacc 10882269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1068 - 1176
Target Start/End: Original strand, 26561995 - 26562103
Alignment:
Q  1068 acataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcct 1167  Q
    |||||||| ||||||| ||  ||| || ||||||||||||||||| ||||| | ||| |  ||||||||||||||||| ||| |||| ||  ||||||||    
T  26561995 acataaatgatgggtgacctgataacggaaacctgataacaggtggcccaaagaatcgtgaagagactctgataccatattagaaatggtggttgagcct 26562094  T
Q  1168 aacacaacc 1176  Q
    |||| ||||    
T  26562095 aacataacc 26562103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1060 - 1162
Target Start/End: Original strand, 37923398 - 37923500
Alignment:
Q  1060 gttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaa 1159  Q
    |||||| ||||||||| ||||||  ||| ||||| |||| ||||||  ||||||||||||  || ||  | |||||||||||||||||||||| || |||    
T  37923398 gttcgtagacataaatgatgggtaacccgatagcaaaaatctgatagtaggtgacccaataaatattgaaaagactctgataccatcttaaaattcctaa 37923497  T
Q  1160 ttg 1162  Q
    |||    
T  37923498 ttg 37923500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1078 - 1154
Target Start/End: Original strand, 30727286 - 30727363
Alignment:
Q  1078 tgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttaga-gagactctgataccatcttaaaaat 1154  Q
    ||||||||||||||||| ||||||||||  ||||| |||||   ||||| ||  ||||||||||||||||||||||||    
T  30727286 tgggtggcccaatagcggaaacctgatagaaggtggcccaacaaatcttggattagactctgataccatcttaaaaat 30727363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1068 - 1176
Target Start/End: Original strand, 31257189 - 31257297
Alignment:
Q  1068 acataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcct 1167  Q
    |||||||| | ||||||||| ||| || |||||||||||||| || ||||| | ||| |  |||  |||||||||||| ||| |||||||  ||| ||||    
T  31257189 acataaatgacgggtggcccgataacggaaacctgataacagatggcccaaagaatcgtgaagaagctctgataccatattagaaatcgtggttgggcct 31257288  T
Q  1168 aacacaacc 1176  Q
    |||||||||    
T  31257289 aacacaacc 31257297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1068 - 1176
Target Start/End: Complemental strand, 34027555 - 34027447
Alignment:
Q  1068 acataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcct 1167  Q
    |||||||| | ||||||||| |||  | ||||||||||||||||| ||||| | ||| |  |||| |||| ||||||| ||| |||||||  ||| ||||    
T  34027555 acataaatgacgggtggcccgataatggaaacctgataacaggtggcccaaagaatcgtgaagaggctctaataccatattagaaatcgtggttgggcct 34027456  T
Q  1168 aacacaacc 1176  Q
    |||||||||    
T  34027455 aacacaacc 34027447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1058 - 1129
Target Start/End: Original strand, 1936260 - 1936330
Alignment:
Q  1058 tggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttaga 1129  Q
    ||||||||||||||||||  | ||||||  | ||||| ||||||||||||||||||  ||||||||||||||    
T  1936260 tggttcgttgacataaatggtaggtggctga-tagcggaaacctgataacaggtgattcaatggatcttaga 1936330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 340 - 411
Target Start/End: Original strand, 14971774 - 14971843
Alignment:
Q  340 gctttaatctccctctttttgatgatctcaaaacaagttgatgatgtgatagctcccccttaaacatagcat 411  Q
    |||| |||||||| |||||||| ||| ||||| |||||||||||||||||| |||||||| ||| |||||||    
T  14971774 gcttcaatctccc-ctttttga-gatgtcaaaccaagttgatgatgtgataactccccctgaaatatagcat 14971843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 340 - 411
Target Start/End: Original strand, 15401250 - 15401319
Alignment:
Q  340 gctttaatctccctctttttgatgatctcaaaacaagttgatgatgtgatagctcccccttaaacatagcat 411  Q
    |||| |||||||| |||||||| ||| ||||| |||||||||||||||||| |||||||| ||| |||||||    
T  15401250 gcttcaatctccc-ctttttga-gatgtcaaaccaagttgatgatgtgataactccccctgaaatatagcat 15401319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1068 - 1193
Target Start/End: Original strand, 2544371 - 2544494
Alignment:
Q  1068 acataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcct 1167  Q
    |||||||| | ||||||| | ||| || |||||| |||||||||| ||||| | ||| |  |||||||  |||||||| |||||||||||  ||| ||||    
T  2544371 acataaatgacgggtggctcgataacggaaacctaataacaggtggcccaaagaatcgtgaagagact--gataccatattaaaaatcgtggttgggcct 2544468  T
Q  1168 aacacaaccatacaaaatcgaattgt 1193  Q
    |||||||||  |||||| ||| ||||    
T  2544469 aacacaaccccacaaaaccgacttgt 2544494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 955 - 1013
Target Start/End: Complemental strand, 9688068 - 9688010
Alignment:
Q  955 agttttaaatcatagtcaaggagttgttgtttgatccataaaatttgtgagcaacaact 1013  Q
    |||||||||||| ||| ||| ||||||||||| |  ||||||||||| |||||||||||    
T  9688068 agttttaaatcaaagttaagtagttgttgttttagtcataaaatttgagagcaacaact 9688010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1091 - 1145
Target Start/End: Original strand, 9689045 - 9689099
Alignment:
Q  1091 agcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccat 1145  Q
    |||| |||||||||| ||||||  |||||||||||| ||||| ||||||||||||    
T  9689045 agcggaaacctgatagcaggtggtccaatggatcttggagaggctctgataccat 9689099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1089 - 1175
Target Start/End: Complemental strand, 10903226 - 10903140
Alignment:
Q  1089 atagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaac 1175  Q
    |||||| |||| |||||||||||| ||||||||||||| ||||  |||||||| ||| |||  ||||||  ||| | ||||||||||    
T  10903226 atagcggaaacatgataacaggtggcccaatggatcttggagaagctctgatatcattttagtaatcgtggttggggctaacacaac 10903140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1067 - 1141
Target Start/End: Original strand, 32278992 - 32279066
Alignment:
Q  1067 gacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgata 1141  Q
    |||||||||  ||| |||||| ||||||||||||||||| |||||| ||||||  || || ||||| ||||||||    
T  32278992 gacataaatggtggatggcccgatagcgaaaacctgatagcaggtggcccaataaattttggagaggctctgata 32279066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1096 - 1176
Target Start/End: Original strand, 26239865 - 26239946
Alignment:
Q  1096 aaacctgataacaggtgacccaatggatcttagag-agactctgataccatcttaaaaatcgtaattgagcctaacacaacc 1176  Q
    |||||||||| |||||| ||||| ||||||| ||| || |||||||||||||||| |||| ||  ||| | |||||||||||    
T  26239865 aaacctgatagcaggtggcccaacggatcttggaggaggctctgataccatcttagaaattgtggttgggtctaacacaacc 26239946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 8e-52; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 8e-52
Query Start/End: Original strand, 693 - 1032
Target Start/End: Original strand, 19391880 - 19392214
Alignment:
Q  693 ttgcttatttaaagcaagaggtatccaagatatctagtttcctacggatttttgagaaaagacttggatggtagtggttttgtaaaaatgtcagcaagct 792  Q
    ||||||||||||||||||||||||| |||||| |||||  ||||| ||| || ||| ||||| | ||||||||| |||||| |||||||||||||||| |    
T  19391880 ttgcttatttaaagcaagaggtatctaagatacctagtc-cctacagatctt-gaggaaagaatcggatggtagcggttttataaaaatgtcagcaagat 19391977  T
Q  793 gattttttgtgtcaacgtactcgaatgttacatccttcttttcaacatgatctctgaggaagtgatgccaaatctcagtatgcttagtctttgaatgtaa 892  Q
    ||   || |||||||| ||||| ||  ||||||||||||| |||||  |||| || ||||| | ||||| ||||||| | || |||||  ||||||||||    
T  19391978 gacacttagtgtcaacatactcaaaaattacatccttcttatcaac--gatccctaaggaaattatgccgaatctcaatgtgtttagttcttgaatgtaa 19392075  T
Q  893 ggctgggtttttggtgagatttatagcactagtgttataacaattagattgaaatgcatcctagttttaaatcatagtcaaggagttgttgtttgatcca 992  Q
      ||||||||||||| ||||| |||| |||||||||||  | |||  |||| ||  || ||||||||||||||||||||||| ||||||||||||| |||    
T  19392076 aactgggtttttggtaagattgatagaactagtgttatcgc-attttattggaacacaacctagttttaaatcatagtcaagtagttgttgtttgagcca 19392174  T
Q  993 taaaatttgtgagcaacaactcctggctaccacatattca 1032  Q
    ||||||||||||| ||||||| | |||| | |||||||||    
T  19392175 taaaatttgtgagtaacaactaccggctgctacatattca 19392214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 46 - 267
Target Start/End: Complemental strand, 26022875 - 26022655
Alignment:
Q  46 cgattcagtagtgatacgtttcaaaaacttttgaattgtaccatttgaagtcagaaacttctaatgatacgattcaaacactggtgaatcgattcataca 145  Q
    ||||||||| |||||||| ||||||||||| ||||| ||| |||| ||||||||| |||||| || |||||||||||||||||||||||||||||   ||    
T  26022875 cgattcagttgtgatacgattcaaaaacttgtgaatcgtatcattggaagtcagagacttctgattatacgattcaaacactggtgaatcgattcggtca 26022776  T
Q  146 ctgaaaaatgatga-ataaggctaagttccatatatgtgaacaatgcacaagacaccaatgaatcctaggtcaatgagacatagttgctaggtgatgtaa 244  Q
     |  |||| ||||| ||| ||||||||| || |||||| ||| || |||| ||||| ||||||| ||||| ||| || |||||||||||||||| | |||    
T  26022775 at--aaaaagatgagatatggctaagtttcaaatatgtaaaccattcacatgacactaatgaattctaggacaacgatacatagttgctaggtgctttaa 26022678  T
Q  245 catgactatatgctagagaacaa 267  Q
    ||||||||||||||||| |||||    
T  26022677 catgactatatgctagaaaacaa 26022655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Original strand, 14466321 - 14466440
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  |||||||||| |||||| ||||||||||||| ||| ||||||||||||| ||||| |||||||||||||||| |||| |    
T  14466321 ttggttcgtggacataaatggtgggtggcccgatagcggaaacctgataacaagtggcccaatggatcttggagaggctctgataccatcttagaaatgg 14466420  T
Q  1157 taattgagcctaacacaacc 1176  Q
    |  ||| |||||||||||||    
T  14466421 tggttgggcctaacacaacc 14466440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 1049 - 1176
Target Start/End: Complemental strand, 16419448 - 16419321
Alignment:
Q  1049 tattgagtttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatctt 1148  Q
    ||||||| ||||||||| |||||||||  |||||||| | |||||| |||||||||| |||||| ||||||||||||| ||||| |||||||||||||||    
T  16419448 tattgagcttggttcgtggacataaatggtgggtggctcgatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatctt 16419349  T
Q  1149 aaaaatcgtaattgagcctaacacaacc 1176  Q
    | |||||||  ||| |||||| ||||||    
T  16419348 agaaatcgtggttgggcctaatacaacc 16419321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 4e-26
Query Start/End: Original strand, 1057 - 1206
Target Start/End: Original strand, 15124694 - 15124843
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  ||| || ||| ||| ||||||||||||| ||||||  |||||||||||| |||||||||||||||||||||| ||||||    
T  15124694 ttggttcgtggacataaatggtggatgacccgataacgaaaacctgatagcaggtggtccaatggatcttggagagactctgataccatcttagaaatcg 15124793  T
Q  1157 taattgagcctaacacaaccatacaaaatcgaattgtaaaatgcagattg 1206  Q
    |  ||| | |||||||||||  |||||| |||||||| || || ||||||    
T  15124794 tggttgggtctaacacaaccccacaaaaccgaattgtgaagtgaagattg 15124843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 1061 - 1176
Target Start/End: Original strand, 93269 - 93384
Alignment:
Q  1061 ttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaat 1160  Q
    ||||| ||||||| |  |||||||||| ||| || ||| |||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||||||  |    
T  93269 ttcgtggacataattggtgggtggcccgataacggaaagctgatagcaggtggcccaatggatcttggagaggctctgataccatcttaaaaatcgtggt 93368  T
Q  1161 tgagcctaacacaacc 1176  Q
    || |||||||||||||    
T  93369 tgggcctaacacaacc 93384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Complemental strand, 2029942 - 2029823
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  ||||||| || |||||| |||||| ||| |||||| ||||||||||||| ||||| |||||||||||||||| ||||||    
T  2029942 ttggttcgtggacataaatggtgggtggtccgatagcggaaacctaatagcaggtggcccaatggatcttggagaggctctgataccatcttagaaatcg 2029843  T
Q  1157 taattgagcctaacacaacc 1176  Q
    |  ||| |||||| ||||||    
T  2029842 tggttgggcctaaaacaacc 2029823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 1057 - 1174
Target Start/End: Original strand, 40149147 - 40149264
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||| ||||||| || |||||  ||| |||||| ||||||||||||||||||||  |||| |||||||||||||||| |||| |    
T  40149147 ttggttcgtggacataaatagtgggtggtccgatagctgaaatctgatagcaggtgacccaatggatcttgaagaggctctgataccatcttagaaattg 40149246  T
Q  1157 taattgagcctaacacaa 1174  Q
    |  ||| |||||||||||    
T  40149247 tggttgggcctaacacaa 40149264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 9e-21
Query Start/End: Original strand, 1057 - 1149
Target Start/End: Complemental strand, 34893598 - 34893506
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatctta 1149  Q
    ||||||||| |||||||||  ||||||| || |||||||||||||||||  ||||| ||||||||||||| ||||| ||||||||||||||||    
T  34893598 ttggttcgtggacataaatggtgggtggtccgatagcgaaaacctgatagtaggtggcccaatggatcttggagaggctctgataccatctta 34893506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Complemental strand, 16533485 - 16533366
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  |||||||||| ||||||||||||||||| |||||  |||||||||||||  |||| |||||||||||| ||| || |||    
T  16533485 ttggttcgtggacataaatggtgggtggcccgatagcgaaaacctgatagcaggtagcccaatggatcttgaagaggctctgataccattttagaagtcg 16533386  T
Q  1157 taattgagcctaacacaacc 1176  Q
    || ||| |  ||||||||||    
T  16533385 tagttgggtgtaacacaacc 16533366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Original strand, 40379355 - 40379474
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| || ||||||  |||||||||| |||| | |||||||||| |||||| || |||||||||| || || |||||||||||||||| ||||||    
T  40379355 ttggttcgtggatataaatggtgggtggcccgatagaggaaacctgatagcaggtggcctaatggatcttggaaaggctctgataccatcttagaaatcg 40379454  T
Q  1157 taattgagcctaacacaacc 1176  Q
    |  ||| |||||||||||||    
T  40379455 tggttgggcctaacacaacc 40379474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Original strand, 36352091 - 36352189
Alignment:
Q  1078 tgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 1176  Q
    |||||||||| ||| || ||||||||||||||||| ||| |||||||||  ||||||||| |||||||||||||||| ||  |||| ||||||||||||    
T  36352091 tgggtggcccgataacggaaacctgataacaggtggcccgatggatcttgaagagactctaataccatcttaaaaattgtggttgaacctaacacaacc 36352189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Original strand, 93559 - 93657
Alignment:
Q  1078 tgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 1176  Q
    |||||||||| ||| || ||||||||||  ||||||||||||||||||| || ||  ||||||||||||||| |||||||  ||| |||||||||||||    
T  93559 tgggtggcccgataacggaaacctgatagtaggtgacccaatggatcttggaaaggttctgataccatcttagaaatcgtggttgggcctaacacaacc 93657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 1057 - 1145
Target Start/End: Original strand, 37812414 - 37812502
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccat 1145  Q
    ||||||||| |||||||| | |||||||||| |||||  |||||||||| |||||| ||||||||||||| ||||| ||| ||||||||    
T  37812414 ttggttcgtggacataaacagtgggtggcccgatagcagaaacctgatagcaggtggcccaatggatcttggagaggctccgataccat 37812502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1078 - 1173
Target Start/End: Original strand, 2375095 - 2375190
Alignment:
Q  1078 tgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacaca 1173  Q
    ||||||| || ||| |||||| |||||| |||||||||||||| ||| |  | ||||||||||| ||||||||||||| | |||||||||||||||    
T  2375095 tgggtggtccgataacgaaaatctgatagcaggtgacccaatgaatcctgaaaagactctgatatcatcttaaaaatcttgattgagcctaacaca 2375190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Complemental strand, 17719573 - 17719454
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  ||| |||||  |||| | |||||||||| |||||| || |||||||||| |||||||| ||||||||||||| |||| |    
T  17719573 ttggttcgtggacataaatggtggatggccggataggggaaacctgatagcaggtggccaaatggatcttggagagactttgataccatcttagaaattg 17719474  T
Q  1157 taattgagcctaacacaacc 1176  Q
    |  ||| ||| |||||||||    
T  17719473 tggttgggccgaacacaacc 17719454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1067 - 1161
Target Start/End: Complemental strand, 42895411 - 42895316
Alignment:
Q  1067 gacataaataatgggtggcccaatagcgaaaacctgataacaggtgaccc-aatggatcttagagagactctgataccatcttaaaaatcgtaatt 1161  Q
    |||||||||  ||||| |||| |||||| |||| ||||| |||||| ||| |||||||||||||||| ||||||||||||| || |||||||||||    
T  42895411 gacataaatggtgggtcgcccgatagcggaaacttgatatcaggtggccctaatggatcttagagaggctctgataccatcatagaaatcgtaatt 42895316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1068 - 1176
Target Start/End: Complemental strand, 2324402 - 2324294
Alignment:
Q  1068 acataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcct 1167  Q
    |||||||| | ||||||||| ||| || ||||||||||||||||| |||||   ||| |  |||| |||||||||||| |||||||||||  ||| ||||    
T  2324402 acataaatgacgggtggcccgataacggaaacctgataacaggtggcccaaacaatcgtgaagaggctctgataccatattaaaaatcgtggttgggcct 2324303  T
Q  1168 aacacaacc 1176  Q
    |||||||||    
T  2324302 aacacaacc 2324294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Original strand, 5711585 - 5711705
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagag-agactctgataccatcttaaaaatc 1155  Q
    ||||||||| |||||||||  |||||||||| ||| || |||||||||| ||||||  |||| ||||||| ||| || ||||||||| |||||| ||||     
T  5711585 ttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggtccaacggatcttggaggaggctctgatactatcttagaaatg 5711684  T
Q  1156 gtaattgagcctaacacaacc 1176  Q
    ||  ||| |||||||||||||    
T  5711685 gtggttgggcctaacacaacc 5711705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1061 - 1173
Target Start/End: Original strand, 13250172 - 13250284
Alignment:
Q  1061 ttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaat 1160  Q
    ||||| |||||||||  |||||| |||||||||  |||||| |||| ||||||||||||||||||| || |  |||| ||| ||||||| |||||||| |    
T  13250172 ttcgtggacataaatggtgggtgccccaatagcagaaaccttataaaaggtgacccaatggatcttggaaaagctctaatatcatcttagaaatcgtatt 13250271  T
Q  1161 tgagcctaacaca 1173  Q
    ||  |||||||||    
T  13250272 tggacctaacaca 13250284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1057 - 1193
Target Start/End: Complemental strand, 24396036 - 24395900
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||| | |||||||||  ||||||| || |||| |||||| ||| | ||||||  ||||||||||||  |||| |||||||||| ||||| ||||||    
T  24396036 ttggttcatggacataaatggtgggtggtccgatagtgaaaacatgagagcaggtggtccaatggatcttgaagaggctctgataccctcttagaaatcg 24395937  T
Q  1157 taattgagcctaacacaaccatacaaaatcgaattgt 1193  Q
    |  ||  |||||||||||||  |||||||||| ||||    
T  24395936 tggtttggcctaacacaaccccacaaaatcgatttgt 24395900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1086 - 1174
Target Start/End: Complemental strand, 5594172 - 5594083
Alignment:
Q  1086 ccaatagcgaaaacctgataacaggtg--acccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaa 1174  Q
    ||||| ||| |||||||||| ||||||  ||||||||||||||  |||| ||||||||| ||||| |||||||| ||||||||||||||||    
T  5594172 ccaatggcggaaacctgatagcaggtgtgacccaatggatcttgaagaggctctgatactatctt-aaaatcgtgattgagcctaacacaa 5594083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 1057 - 1142
Target Start/End: Original strand, 18607155 - 18607240
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgatac 1142  Q
    ||||||||| |||||||||  ||||| |||| ||| || |||||||||| || ||| ||||||||||||| ||||| |||||||||    
T  18607155 ttggttcgtagacataaatggtgggttgcccgataacggaaacctgatagcatgtggcccaatggatcttggagaggctctgatac 18607240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 1049 - 1149
Target Start/End: Complemental strand, 19110424 - 19110323
Alignment:
Q  1049 tattgagtttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagag-agactctgataccatct 1147  Q
    ||||||| ||||||||| | ||||||| |||  |||||| ||||| ||||||| ||| |||||||||||| ||||||| ||| || || |||||||||||    
T  19110424 tattgagcttggttcgtgggcataaatgatgaatggcccgatagcaaaaacctaatagcaggtgacccaacggatcttggagtaggctttgataccatct 19110325  T
Q  1148 ta 1149  Q
    ||    
T  19110324 ta 19110323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1068 - 1176
Target Start/End: Complemental strand, 5509241 - 5509133
Alignment:
Q  1068 acataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcct 1167  Q
    |||||||| | ||||||||| ||| || ||||||||||||||||| ||||| | ||| |  |||| |||||||||||| ||| ||||| |  ||| ||||    
T  5509241 acataaatgacgggtggcccgataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatattagaaatcatggttgggcct 5509142  T
Q  1168 aacacaacc 1176  Q
    |||||||||    
T  5509141 aacacaacc 5509133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1057 - 1112
Target Start/End: Original strand, 21383436 - 21383491
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtg 1112  Q
    ||||| ||| || ||||||||||||||||||||||||| |||||||||| ||||||    
T  21383436 ttggtgcgtggatataaataatgggtggcccaatagcggaaacctgatagcaggtg 21383491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1049 - 1175
Target Start/End: Complemental strand, 32356564 - 32356440
Alignment:
Q  1049 tattgagtttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatctt 1148  Q
    |||| |||||||||||| |||||||||  | ||| |||| |||||| ||||||||   |||||| ||||||| || ||  |||| ||||||||||| |||    
T  32356564 tattcagtttggttcgtggacataaatggtaggtagcccgatagcggaaacctgag--caggtggcccaatgaatattgaagaggctctgataccaactt 32356467  T
Q  1149 aaaaatcgtaattgagcctaacacaac 1175  Q
    | || ||||| ||| ||||||||||||    
T  32356466 agaattcgtagttgggcctaacacaac 32356440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1089 - 1174
Target Start/End: Complemental strand, 38629983 - 38629897
Alignment:
Q  1089 atagcgaaaacctgataacaggtgacccaatggatcttagag-agactctgataccatcttaaaaatcgtaattgagcctaacacaa 1174  Q
    |||||| |||||| |||  ||||||||||  ||||||| ||| || |||||||||||||||||||||||| ||||| | ||||||||    
T  38629983 atagcggaaacctaatagaaggtgacccatcggatcttggaggaggctctgataccatcttaaaaatcgtgattgaacataacacaa 38629897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1057 - 1145
Target Start/End: Original strand, 44404072 - 44404162
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatag-cgaaaacctgataacaggtgacccaatggatcttagagagactc-tgataccat 1145  Q
    ||||||| | |||||||||| |||||| ||| |||| || |||||||||| ||||||  |||||||||||| ||||||||| |||||||||    
T  44404072 ttggttcatggacataaatagtgggtgacccgataggcggaaacctgatagcaggtggtccaatggatcttggagagactcttgataccat 44404162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1068 - 1145
Target Start/End: Original strand, 27038603 - 27038680
Alignment:
Q  1068 acataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccat 1145  Q
    |||||||| | ||||||||| ||| || ||||||||||||||||| ||||| | ||| || |||| ||||||||||||    
T  27038603 acataaatgacgggtggcccgataacggaaacctgataacaggtggcccaaagaatcgtaaagaggctctgataccat 27038680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1093 - 1155
Target Start/End: Complemental strand, 7748132 - 7748069
Alignment:
Q  1093 cgaaaacctgataacaggtgacccaatggatcttagag-agactctgataccatcttaaaaatc 1155  Q
    ||||||||||||| ||||||||||||  ||| |||||| ||||| |||||| ||||||||||||    
T  7748132 cgaaaacctgatagcaggtgacccaaatgattttagagtagactttgatacaatcttaaaaatc 7748069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1133 - 1176
Target Start/End: Complemental strand, 10571067 - 10571024
Alignment:
Q  1133 actctgataccatcttaaaaatcgtaattgagcctaacacaacc 1176  Q
    ||||||||||||||||| |||||||  |||||||||||||||||    
T  10571067 actctgataccatcttagaaatcgtggttgagcctaacacaacc 10571024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Complemental strand, 15461147 - 15461028
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| ||||||||| ||| ||| ||| |||||||||| |||||| ||| ||| | ||| || ||| |||||  ||||| || |||||||||||      
T  15461147 ttggttcgtggacataaatgatgtgtgacccgatagcgaaaatctgatagcagttgatctaattgaccttggagaggttctgaaactatcttaaaaatta 15461048  T
Q  1157 taattgagcctaacacaacc 1176  Q
    |  ||||| |||||||||||    
T  15461047 tggttgagtctaacacaacc 15461028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1108 - 1151
Target Start/End: Complemental strand, 26237194 - 26237151
Alignment:
Q  1108 aggtgacccaatggatcttagagagactctgataccatcttaaa 1151  Q
    |||||| |||||||||||| || |||||||||||||||||||||    
T  26237194 aggtgaaccaatggatcttggatagactctgataccatcttaaa 26237151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1113 - 1176
Target Start/End: Complemental strand, 29718445 - 29718382
Alignment:
Q  1113 acccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 1176  Q
    ||||||||||| |||||||| ||||||||||| |||| |||||||  ||  |||||||||||||    
T  29718445 acccaatggattttagagaggctctgataccaacttagaaatcgtggttaggcctaacacaacc 29718382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1057 - 1144
Target Start/End: Original strand, 30701169 - 30701256
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgatacca 1144  Q
    |||||| || |||||||||  ||| |||||| ||||  |||||||||||  ||||| |||||||||||||  ||||||||| ||||||    
T  30701169 ttggtttgtggacataaatggtggatggcccgatagaaaaaacctgatagtaggtggcccaatggatcttgaagagactctaatacca 30701256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1107 - 1157
Target Start/End: Complemental strand, 43319802 - 43319751
Alignment:
Q  1107 caggtgacccaatggatcttagag-agactctgataccatcttaaaaatcgt 1157  Q
    ||||||||||||| |||||| ||| ||||||||||||||||||| |||||||    
T  43319802 caggtgacccaattgatctttgaggagactctgataccatcttataaatcgt 43319751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1078 - 1170
Target Start/End: Original strand, 21383601 - 21383694
Alignment:
Q  1078 tgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagag-agactctgataccatcttaaaaatcgtaattgagcctaac 1170  Q
    |||||| |||||||||  |||| ||||| |||||| |||||  |||||| ||| || |||||||||||||||| |||||||  ||| |||||||    
T  21383601 tgggtgacccaatagcagaaacttgatagcaggtggcccaacagatcttggaggaggctctgataccatcttagaaatcgtggttgggcctaac 21383694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1068 - 1145
Target Start/End: Original strand, 36316207 - 36316284
Alignment:
Q  1068 acataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccat 1145  Q
    ||||||||  |||||||||| ||| || ||||||||||||||||| ||||| | ||| |  |||| ||||||||||||    
T  36316207 acataaatggtgggtggcccgataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccat 36316284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 4e-35; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 4e-35
Query Start/End: Original strand, 697 - 1013
Target Start/End: Original strand, 28801727 - 28802041
Alignment:
Q  697 ttatttaaagcaagaggtatccaagatatctagtttcctacggatttttgagaaaagacttggatggtagtggttttgtaaaaatgtcagcaagctgatt 796  Q
    |||||||||| |||||||||| | |||| |||||| ||||||||| ||   |||| || | ||||||||| ||||||||| ||||||||||||| |||      
T  28801727 ttatttaaagtaagaggtatctatgatacctagttccctacggatcttac-gaaaggagtcggatggtagaggttttgtagaaatgtcagcaagttgaca 28801825  T
Q  797 ttttgtgtcaacgtactcgaatgttacatccttcttttcaacatgatctctgaggaagtgatgccaaatctcagtatgcttagtctttgaatgtaaggct 896  Q
     || |||||||| |||||||| || || |||||||||||||||||||| || ||||| ||||    ||| ||| | || |||||  ||||||||||| ||    
T  28801826 cttagtgtcaacatactcgaaagtcacgtccttcttttcaacatgatccctaaggaaatgatattgaatttcaatgtgtttagttcttgaatgtaagtct 28801925  T
Q  897 gggtttttggtgagatttatagcactagtgttataacaattagattgaaatgcatcctagttttaaatcatagtcaaggagttgttgtttgatccataaa 996  Q
    || ||||| |||||||| |||||||||||| | |  || ||| |||| || ||| | |||||||||||| ||||| || |||||||| || | ||||| |    
T  28801926 ggattttttgtgagattgatagcactagtgctttcgcattta-attggaacgcaacttagttttaaatcttagtcgagtagttgttgcttaagccataga 28802024  T
Q  997 atttgtgagcaacaact 1013  Q
    ||||||||| |||||||    
T  28802025 atttgtgagaaacaact 28802041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Original strand, 35819039 - 35819158
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  |||||| ||| |||||| |||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  35819039 ttggttcgtggacataaatggtgggtgacccgatagcggaaacctgatagcaggtggcccaatggatcttagagagactctgatgccatcttaaaaatcg 35819138  T
Q  1157 taattgagcctaacacaacc 1176  Q
    |  ||| |||||||||||||    
T  35819139 tggttgggcctaacacaacc 35819158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Original strand, 22231219 - 22231338
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  | |||||||| |||||| |||||||||| |||||| |||||||||| || ||||| |||||||||||||||| ||||||    
T  22231219 ttggttcgtggacataaatggtaggtggcccgatagcggaaacctgatagcaggtggcccaatggattttggagaggctctgataccatcttagaaatcg 22231318  T
Q  1157 taattgagcctaacacaacc 1176  Q
    |  ||| |||||||||||||    
T  22231319 tggttgggcctaacacaacc 22231338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 1057 - 1157
Target Start/End: Original strand, 28245672 - 28245772
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  |||||||||| |||||| |||||||||| |||||| ||||||||||||| ||||| |||||||||||| ||| ||||||    
T  28245672 ttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatattagaaatcg 28245771  T
Q  1157 t 1157  Q
    |    
T  28245772 t 28245772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 1061 - 1174
Target Start/End: Complemental strand, 4645811 - 4645698
Alignment:
Q  1061 ttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaat 1160  Q
    ||||| ||||||| |  |||||||||| |||||| |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||| ||||| |  |    
T  4645811 ttcgtggacataattggtgggtggcccgatagcggaaacctgatagcaggtgacccaatggatctttgagaggctctgatactatcttataaatcatggt 4645712  T
Q  1161 tgagcctaacacaa 1174  Q
    |||| |||||||||    
T  4645711 tgagtctaacacaa 4645698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Original strand, 40717352 - 40717471
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    |||||| || |||||||||  ||||||| || |||||| |||||||||  |||||| |||||||||| || ||||| |||||||||||||||| ||||||    
T  40717352 ttggtttgtggacataaatggtgggtggtccgatagcggaaacctgatggcaggtggcccaatggatattggagaggctctgataccatcttagaaatcg 40717451  T
Q  1157 taattgagcctaacacaacc 1176  Q
    |  ||| |||||||||||||    
T  40717452 tggttgggcctaacacaacc 40717471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Complemental strand, 35788833 - 35788713
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagag-agactctgataccatcttaaaaatc 1155  Q
    ||||||||| |||||||||  |||||||||  ||| || |||||||||| |||||| ||||| ||||||| ||| || |||||||||||||||| |||||    
T  35788833 ttggttcgtggacataaatggtgggtggcctgataacggaaacctgatagcaggtggcccaacggatcttggaggaggctctgataccatcttagaaatc 35788734  T
Q  1156 gtaattgagcctaacacaacc 1176  Q
    ||  ||| |||||||||||||    
T  35788733 gtggttgggcctaacacaacc 35788713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 1068 - 1175
Target Start/End: Complemental strand, 6218366 - 6218259
Alignment:
Q  1068 acataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcct 1167  Q
    |||||||| ||||||| ||  |||||| ||||||||||  |||||| |||||||||||| ||||| |||||||||||||||| |||||||  ||| | ||    
T  6218366 acataaatgatgggtgacctgatagcggaaacctgatagtaggtgatccaatggatcttggagaggctctgataccatcttagaaatcgtggttgtgtct 6218267  T
Q  1168 aacacaac 1175  Q
    ||||||||    
T  6218266 aacacaac 6218259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 1049 - 1176
Target Start/End: Original strand, 11036649 - 11036776
Alignment:
Q  1049 tattgagtttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatctt 1148  Q
    ||||||| ||||||| | ||||| |||  |||||||||  |||||| |||||| |||  ||||| ||||||||||||||||| | |||||||||||||||    
T  11036649 tattgagcttggttcatggacattaatggtgggtggcctgatagcggaaacctaatagtaggtggcccaatggatcttagagtggctctgataccatctt 11036748  T
Q  1149 aaaaatcgtaattgagcctaacacaacc 1176  Q
    |||||| ||  ||  |||||||||||||    
T  11036749 aaaaattgtggttaggcctaacacaacc 11036776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 1082 - 1176
Target Start/End: Original strand, 34357966 - 34358060
Alignment:
Q  1082 tggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 1176  Q
    |||||| |||||| ||||||||||||| ||| |||||| ||||||  |||| |||||||| ||||||| |||||||  |||||||||||||||||    
T  34357966 tggcccgatagcggaaacctgataacaagtggcccaatagatcttgtagaggctctgatatcatcttagaaatcgtgtttgagcctaacacaacc 34358060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1080 - 1157
Target Start/End: Original strand, 21646435 - 21646512
Alignment:
Q  1080 ggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgt 1157  Q
    ||||| || |||| |||||| ||||| |||||||||||||| ||||| |||||||||| |||||||||||||||||||    
T  21646435 ggtggtccgatagtgaaaacatgatagcaggtgacccaatgaatcttggagagactctaataccatcttaaaaatcgt 21646512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 1077 - 1173
Target Start/End: Complemental strand, 7926481 - 7926385
Alignment:
Q  1077 atgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacaca 1173  Q
    ||||||||||| |||| | |||||||||| |||||| ||||||||||||| ||||| |||||||||||||||  ||||| |  ||| ||||||||||    
T  7926481 atgggtggccctatagtggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatcttcgaaatcttggttgggcctaacaca 7926385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Original strand, 35796888 - 35797007
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| || ||||||  |||||||||| |||||| |||||||||| |||||   |||||||||||   |||| |||||||||||||||| |||| |    
T  35796888 ttggttcgtggagataaatggtgggtggcccgatagcggaaacctgatagcaggtagtccaatggatctcgaagaggctctgataccatcttagaaatgg 35796987  T
Q  1157 taattgagcctaacacaacc 1176  Q
    || ||| || ||||||||||    
T  35796988 tagttgggcttaacacaacc 35797007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 1057 - 1175
Target Start/End: Original strand, 50543476 - 50543596
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaat--ggatcttagagagactctgataccatcttaaaaat 1154  Q
    ||||||||| |||||||||  |||||||||| ||| || |||||||||| ||||||  | |||  ||||||| ||||| |||||||| ||||||| ||||    
T  50543476 ttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggtcaaatatggatcttggagaggctctgatatcatcttagaaat 50543575  T
Q  1155 cgtaattgagcctaacacaac 1175  Q
    |||  ||| ||||||||||||    
T  50543576 cgtggttgggcctaacacaac 50543596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1068 - 1176
Target Start/End: Original strand, 14783109 - 14783217
Alignment:
Q  1068 acataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcct 1167  Q
    |||||||| | ||||||||| ||| |||||||||||||||||||| ||||| | ||  |  |||| |||||||||||| ||| |||||||  ||| ||||    
T  14783109 acataaatgacgggtggcccgataacgaaaacctgataacaggtggcccaaagaattgtgaagaggctctgataccatattagaaatcgtggttgggcct 14783208  T
Q  1168 aacacaacc 1176  Q
    |||||||||    
T  14783209 aacacaacc 14783217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1089 - 1177
Target Start/End: Original strand, 30530105 - 30530193
Alignment:
Q  1089 atagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacca 1177  Q
    |||||| ||| |||||| |||||| || |||||||||| ||||| |||||||||||||||| |||| ||  |||||||||||| |||||    
T  30530105 atagcggaaatctgatagcaggtggcctaatggatcttggagaggctctgataccatcttagaaattgtggttgagcctaacataacca 30530193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1068 - 1171
Target Start/End: Original strand, 4905658 - 4905761
Alignment:
Q  1068 acataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcct 1167  Q
    ||||||||  |||||||||| |||||  |||||| ||| |||||| ||||||||| ||| ||||| |||||||| ||||||| ||||| |  ||||||||    
T  4905658 acataaatggtgggtggcccgatagcagaaacctaatagcaggtggcccaatggagcttggagaggctctgatatcatcttagaaatcatggttgagcct 4905757  T
Q  1168 aaca 1171  Q
    ||||    
T  4905758 aaca 4905761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 1068 - 1193
Target Start/End: Complemental strand, 9685560 - 9685435
Alignment:
Q  1068 acataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcct 1167  Q
    |||||||| | ||||||||| ||| || ||||||||||||||||| ||||| | ||  |  |||| |||||||||||| ||| |||||||  ||| ||||    
T  9685560 acataaatgacgggtggcccgataacggaaacctgataacaggtggcccaaagaattgtgaagaggctctgataccatattagaaatcgtggttgggcct 9685461  T
Q  1168 aacacaaccatacaaaatcgaattgt 1193  Q
    |||||||||  |||||| ||| ||||    
T  9685460 aacacaacctcacaaaaccgacttgt 9685435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 1111 - 1176
Target Start/End: Complemental strand, 17111682 - 17111617
Alignment:
Q  1111 tgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 1176  Q
    ||||| |||||||||| || ||||||||||||||||||| |||||||  ||| |||||||||||||    
T  17111682 tgacctaatggatcttggaaagactctgataccatcttagaaatcgtggttgggcctaacacaacc 17111617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1068 - 1176
Target Start/End: Original strand, 12869185 - 12869293
Alignment:
Q  1068 acataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcct 1167  Q
    |||||||| | ||||| ||| ||| || |||||||||||||||||  ||||   ||| |  ||||||||||||||||||||| |||||||  ||| ||||    
T  12869185 acataaatgacgggtgacccgataacggaaacctgataacaggtgggccaaaaaatcgtgaagagactctgataccatcttagaaatcgtggttgggcct 12869284  T
Q  1168 aacacaacc 1176  Q
    |||||||||    
T  12869285 aacacaacc 12869293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 691 - 783
Target Start/End: Complemental strand, 13554717 - 13554626
Alignment:
Q  691 tcttgcttatttaaagcaagaggtatccaagatatctagtttcctacggatttttgagaaaagacttggatggtagtggttttgtaaaaatgt 783  Q
    |||| |||||||||||||||||||||| | |||| |||  | |||||  | ||||||||||| | | ||||||||||||||||||||||||||    
T  13554717 tctttcttatttaaagcaagaggtatctaggatacctaactccctacata-ttttgagaaaataatcggatggtagtggttttgtaaaaatgt 13554626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1067 - 1150
Target Start/End: Complemental strand, 26549587 - 26549503
Alignment:
Q  1067 gacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttaga-gagactctgataccatcttaa 1150  Q
    ||||||||| ||||||||||  ||| |  |||||||||| ||||||||||||  ||||||||| |||||||||||| ||||||||    
T  26549587 gacataaatgatgggtggcctgataacagaaacctgatagcaggtgacccaacagatcttagaggagactctgatatcatcttaa 26549503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1057 - 1145
Target Start/End: Original strand, 27634227 - 27634315
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccat 1145  Q
    ||||||||| |||||||| | ||||||| || |||||  |||||||||| || |||  |||||||||||| ||||| ||||||||||||    
T  27634227 ttggttcgtggacataaacagtgggtggtccgatagcagaaacctgatagcaagtggtccaatggatcttggagaggctctgataccat 27634315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1050 - 1145
Target Start/End: Original strand, 35645304 - 35645399
Alignment:
Q  1050 attgagtttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccat 1145  Q
    |||| ||||||||||| |||||||||   ||||||||| |||||| |||| ||||| || ||| ||| ||||||| | ||||| ||||||||||||    
T  35645304 attgggtttggttcgtggacataaatggcgggtggcccgatagcggaaacttgatagcatgtggccccatggatcgttgagaggctctgataccat 35645399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1050 - 1145
Target Start/End: Original strand, 35645593 - 35645688
Alignment:
Q  1050 attgagtttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccat 1145  Q
    |||| ||||||||||| |||||||||   ||||||||| |||||| |||| ||||| || ||| ||| ||||||| | ||||| ||||||||||||    
T  35645593 attgggtttggttcgtggacataaatggcgggtggcccgatagcggaaacttgatagcatgtggccccatggatcgttgagaggctctgataccat 35645688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1068 - 1187
Target Start/End: Original strand, 53828445 - 53828564
Alignment:
Q  1068 acataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcct 1167  Q
    |||||||| | ||||||||| ||| || ||||||||||| ||||| ||||| | ||| |  | || |||||||||||||||| |||| ||  ||| ||||    
T  53828445 acataaatgacgggtggcccgataacggaaacctgataataggtggcccaaagaatcgttaaaaggctctgataccatcttagaaattgtggttgggcct 53828544  T
Q  1168 aacacaaccatacaaaatcg 1187  Q
    |||||||||  |||||||||    
T  53828545 aacacaaccccacaaaatcg 53828564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1069 - 1155
Target Start/End: Original strand, 36686064 - 36686150
Alignment:
Q  1069 cataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatc 1155  Q
    |||||||  |||||||||| |||||| |||||||||| |||||| |||| || |||||  |||| |||| |||| ||||||||||||    
T  36686064 cataaatggtgggtggcccgatagcggaaacctgatagcaggtggcccattgaatcttgaagaggctcttatactatcttaaaaatc 36686150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1057 - 1126
Target Start/End: Original strand, 12005620 - 12005689
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatctt 1126  Q
    |||||||||||||||||||  || ||||||  |||||| ||||||||||  |||||||||| ||||||||    
T  12005620 ttggttcgttgacataaatggtgtgtggcctgatagcggaaacctgatagtaggtgacccagtggatctt 12005689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1068 - 1176
Target Start/End: Original strand, 40716542 - 40716651
Alignment:
Q  1068 acataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttaga-gagactctgataccatcttaaaaatcgtaattgagcc 1166  Q
    |||||||| | ||||||||| ||| || |||||||||| |||||| ||||| ||||| | || ||| |||||||||||||||| ||| | |  ||| |||    
T  40716542 acataaatgacgggtggcccgataacggaaacctgatagcaggtggcccaacggatcgtggatgaggctctgataccatcttagaaaccatggttgggcc 40716641  T
Q  1167 taacacaacc 1176  Q
    ||||||||||    
T  40716642 taacacaacc 40716651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1056 - 1176
Target Start/End: Original strand, 21750187 - 21750307
Alignment:
Q  1056 tttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatc 1155  Q
    |||||||||| ||||||||   ||| || |||| | ||| ||| | |||| || |||| |||||| || ||| |||| ||||||||||||||||||| ||    
T  21750187 tttggttcgtggacataaacggtggatgacccatttgcggaaatcagatagcatgtgatccaatgaattttaaagaggctctgataccatcttaaaattc 21750286  T
Q  1156 gtaattgagcctaacacaacc 1176  Q
    || |||| | |||||||||||    
T  21750287 gtgattgggtctaacacaacc 21750307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1089 - 1148
Target Start/End: Original strand, 6666762 - 6666821
Alignment:
Q  1089 atagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatctt 1148  Q
    |||||| || |||||||| ||||| |||||||||| || |||| ||||||||||||||||    
T  6666762 atagcggaatcctgataaaaggtgtcccaatggattttggagatactctgataccatctt 6666821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 955 - 1013
Target Start/End: Complemental strand, 13554445 - 13554387
Alignment:
Q  955 agttttaaatcatagtcaaggagttgttgtttgatccataaaatttgtgagcaacaact 1013  Q
    |||||||||||| ||| ||| ||||||||||| |  ||||||||||| |||||||||||    
T  13554445 agttttaaatcaaagttaagtagttgttgttttagtcataaaatttgagagcaacaact 13554387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1091 - 1145
Target Start/End: Original strand, 13555422 - 13555476
Alignment:
Q  1091 agcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccat 1145  Q
    |||| |||||||||| ||||||  |||||||||||| ||||| ||||||||||||    
T  13555422 agcggaaacctgatagcaggtggtccaatggatcttggagaggctctgataccat 13555476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1089 - 1195
Target Start/End: Complemental strand, 32002463 - 32002358
Alignment:
Q  1089 atagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaatcga 1188  Q
    |||||| |||||||||| ||| ||||| ||| |||||| |||||  |||||||||||||||||||| ||  ||| | |||| ||||||  |||||| |||    
T  32002463 atagcggaaacctgatagcagatgacc-aatagatcttggagaggttctgataccatcttaaaaattgtgtttgggtctaatacaacctcacaaaaccga 32002365  T
Q  1189 attgtaa 1195  Q
     ||||||    
T  32002364 tttgtaa 32002358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1138 - 1176
Target Start/End: Complemental strand, 41853466 - 41853428
Alignment:
Q  1138 gataccatcttaaaaatcgtaattgagcctaacacaacc 1176  Q
    |||||||| ||||||||||| ||||||||||||||||||    
T  41853466 gataccattttaaaaatcgtgattgagcctaacacaacc 41853428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1105 - 1186
Target Start/End: Original strand, 51695974 - 51696056
Alignment:
Q  1105 aacaggtgacccaatggatcttag-agagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaatc 1186  Q
    |||||||||||||||| ||||||  ||||  ||| ||||||||||  ||||||||  |||| ||||||||||| |||||||||    
T  51695974 aacaggtgacccaatgaatcttaacagaggttctaataccatcttcgaaatcgtaggtgagtctaacacaaccctacaaaatc 51696056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1094 - 1131
Target Start/End: Complemental strand, 8902764 - 8902727
Alignment:
Q  1094 gaaaacctgataacaggtgacccaatggatcttagaga 1131  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  8902764 gaaaacctgataacaggtggcccaatagatcttagaga 8902727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1100 - 1149
Target Start/End: Original strand, 9908785 - 9908834
Alignment:
Q  1100 ctgataacaggtgacccaatggatcttagagagactctgataccatctta 1149  Q
    |||||| ||||||  ||||| |||||| ||||||||||||||||||||||    
T  9908785 ctgatagcaggtggtccaatagatcttggagagactctgataccatctta 9908834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1049 - 1194
Target Start/End: Complemental strand, 22445633 - 22445488
Alignment:
Q  1049 tattgagtttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatctt 1148  Q
    ||||||||||||||||| ||||||||   ||||| | || |||| | || ||| |||  ||||| | |||||||||||  |||| |||||||||||||||    
T  22445633 tattgagtttggttcgtggacataaacggtgggtagtccgatagtgtaatcctaatagtaggtggctcaatggatcttgaagaggctctgataccatctt 22445534  T
Q  1149 aaaaatcgtaattgagcctaacacaaccatacaaaatcgaattgta 1194  Q
    | || | ||  ||| | |||||||||||  |||||| ||| |||||    
T  22445533 agaatttgtggttgggtctaacacaaccccacaaaaccgacttgta 22445488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1115 - 1183
Target Start/End: Original strand, 24513328 - 24513397
Alignment:
Q  1115 ccaatggatcttagag-agactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaa 1183  Q
    ||||| |||||||||| || |||||||| ||| ||| ||||||| |||| ||||||||||||| ||||||    
T  24513328 ccaatagatcttagaggaggctctgatatcatgttagaaatcgtgattgggcctaacacaaccctacaaa 24513397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1057 - 1126
Target Start/End: Original strand, 25324180 - 25324249
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatctt 1126  Q
    ||||| ||| || ||||||  |||||||||| |||||| |||| ||||| |||||| |||||||||||||    
T  25324180 ttggtgcgtagatataaatggtgggtggcccgatagcggaaacttgatagcaggtggcccaatggatctt 25324249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Complemental strand, 52559742 - 52559621
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaat-ggatcttagag-agactctgataccatcttaaaaat 1154  Q
    ||||||||| |||||||||  |||||||||| ||| |  |||| ||||| |||||| |||||  ||||||| ||| || ||||||||| |||||| ||||    
T  52559742 ttggttcgtggacataaatggtgggtggcccgataacataaacttgatagcaggtggcccaaacggatctttgaggaggctctgatactatcttagaaat 52559643  T
Q  1155 cgtaattgagcctaacacaacc 1176  Q
    | |  ||| |||||||||||||    
T  52559642 catggttgggcctaacacaacc 52559621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1096 - 1193
Target Start/End: Original strand, 53814879 - 53814976
Alignment:
Q  1096 aaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaatcgaattgt 1193  Q
    ||||||||||||||||| ||||| | ||| |  |||| |||||||||||| ||| |||||||  ||| || ||||||||||  |||||| ||| ||||    
T  53814879 aaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatattagaaatcgtggttgggcttaacacaaccccacaaaaccgacttgt 53814976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 6e-34; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 691 - 1037
Target Start/End: Original strand, 20065184 - 20065528
Alignment:
Q  691 tcttgcttatttaaagcaagaggtatccaagatatctagtttcctacggatttttgagaaaagacttggatggtagtggttttgtaaaaatgtcagcaag 790  Q
    ||||||||||||||||| ||| ||||| ||||||| | ||| |||| | || || ||| ||||| | ||||||||   ||||||||||||||||||||||    
T  20065184 tcttgcttatttaaagctagatgtatctaagatatatggttccctatgaatctt-gaggaaagagtcggatggtatcagttttgtaaaaatgtcagcaag 20065282  T
Q  791 ctgattttttgtgtcaacgtactcgaatgttacatccttcttttcaacatgatctctgaggaagtgatgccaaatctcagtatgcttagtctttgaatgt 890  Q
     |||   ||||||||||| |  || || | |||||||||||||||||||| ||| || ||||| ||||  | ||||||| |||| |||||  |||||| |    
T  20065283 ttgacactttgtgtcaacatgatcaaaaggtacatccttcttttcaacataatccctaaggaaatgatatcgaatctcaatatgtttagttcttgaatat 20065382  T
Q  891 aaggctgggtttttggtgagatttatagcactagtgttataacaattagattgaaatgcatcctagttttaaatcatagtcaaggagttgttgtttgatc 990  Q
    ||   ||||||||||| ||||||||||||||| || |||| ||| ||| |||| ||  || ||  ||||||||||| |||| || |||||||| || | |    
T  20065383 aaaattgggtttttggcgagatttatagcactggtattattacattta-attggaacacaaccatgttttaaatcacagtcgagcagttgttgcttaagc 20065481  T
Q  991 cataaaatttgtgagcaacaactcctggctaccacatattcagcctc 1037  Q
    | |||||||||||||||  |||| | |||  ||||||||||||||||    
T  20065482 cttaaaatttgtgagcatgaacttccggcggccacatattcagcctc 20065528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 1e-29
Query Start/End: Original strand, 110 - 261
Target Start/End: Original strand, 24511845 - 24511995
Alignment:
Q  110 tgatacgattcaaacactggtgaatcgattcatacactgaaaaatgatgaataaggctaagttccatatatgtgaacaatgcacaagacaccaatgaatc 209  Q
    |||||||||||||| ||| || ||| |||||| ||||||||||| |||||||| ||||||||| ||||||||| |  |||||||| ||||||||||||||    
T  24511845 tgatacgattcaaaaactagtaaattgattcagacactgaaaaa-gatgaatatggctaagtttcatatatgtaagaaatgcacaggacaccaatgaatc 24511943  T
Q  210 ctaggtcaatgagacatagttgctaggtgatgtaacatgactatatgctaga 261  Q
     || |  ||||| ||||||||| |||||| | ||||||||||||||||||||    
T  24511944 atatgaaaatgatacatagttgttaggtgctttaacatgactatatgctaga 24511995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 1067 - 1176
Target Start/End: Original strand, 17150389 - 17150498
Alignment:
Q  1067 gacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcc 1166  Q
    |||||||||  |||||||||| |||||| ||||||||||  ||||| |||||||||||||  |||| ||||||||||||||||||||||||| |||||||    
T  17150389 gacataaatggtgggtggcccgatagcggaaacctgatagtaggtggcccaatggatcttgaagaggctctgataccatcttaaaaatcgtagttgagcc 17150488  T
Q  1167 taacacaacc 1176  Q
    ||||||||||    
T  17150489 taacacaacc 17150498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1049 - 1176
Target Start/End: Original strand, 24346639 - 24346767
Alignment:
Q  1049 tattgagtttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttaga-gagactctgataccatct 1147  Q
    ||||||| ||||||||| |||||||||  |||||||||| ||| || |||||||||| |||||| ||||||||||||| || ||| ||||||||||||||    
T  24346639 tattgagcttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggcccaatggatcttggaggaggctctgataccatct 24346738  T
Q  1148 taaaaatcgtaattgagcctaacacaacc 1176  Q
    ||||||||||  ||| | |||||||||||    
T  24346739 taaaaatcgtggttgggtctaacacaacc 24346767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Complemental strand, 15480495 - 15480376
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||| | |||||||||  ||||||||||||||||| |||||||||| |||||| |||||||||||||  |||| |||||||||||||||| ||||||    
T  15480495 ttggttcatggacataaatggtgggtggcccaatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccatcttagaaatcg 15480396  T
Q  1157 taattgagcctaacacaacc 1176  Q
    |  ||| |||||||| ||||    
T  15480395 tggttgggcctaacagaacc 15480376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Original strand, 18333610 - 18333729
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  |||||||||| ||||||||||||||||| |||||| ||| |||||||||  |||| |||||||||||||||| || |||    
T  18333610 ttggttcgtggacataaatggtgggtggcccgatagcgaaaacctgatagcaggtggcccgatggatcttgaagaggctctgataccatcttagaattcg 18333709  T
Q  1157 taattgagcctaacacaacc 1176  Q
    |  ||| |||||||||||||    
T  18333710 tggttgggcctaacacaacc 18333729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 1049 - 1176
Target Start/End: Complemental strand, 43117828 - 43117701
Alignment:
Q  1049 tattgagtttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatctt 1148  Q
    ||||||| ||||||||| ||||||||| |||||||| || |||||| |||||||||| |||||| |||||| |||||| || || ||||||||| |||||    
T  43117828 tattgagcttggttcgtggacataaatgatgggtggtccgatagcggaaacctgatagcaggtggcccaatagatcttggaaaggctctgatactatctt 43117729  T
Q  1149 aaaaatcgtaattgagcctaacacaacc 1176  Q
    | |||||||  ||| |||||||||||||    
T  43117728 agaaatcgttgttgggcctaacacaacc 43117701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 1057 - 1171
Target Start/End: Original strand, 95412 - 95526
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  |||||||||| || ||| |||||||||| |||||| ||||||||||||| ||||| |||||||||||||||| ||||||    
T  95412 ttggttcgtggacataaatggtgggtggcccgatggcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatcttagaaatcg 95511  T
Q  1157 taattgagcctaaca 1171  Q
    |  ||| ||||||||    
T  95512 tggttgggcctaaca 95526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 9e-24
Query Start/End: Original strand, 1049 - 1157
Target Start/End: Original strand, 24270008 - 24270117
Alignment:
Q  1049 tattgagtttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttaga-gagactctgataccatct 1147  Q
    ||||||| ||||||||| |||||||||  |||||||||| ||| || |||||||||| |||||| ||||||||||||| || ||| ||||||||||||||    
T  24270008 tattgagcttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggcccaatggatcttggaggaggctctgataccatct 24270107  T
Q  1148 taaaaatcgt 1157  Q
    ||||||||||    
T  24270108 taaaaatcgt 24270117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 1057 - 1193
Target Start/End: Original strand, 25258212 - 25258348
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  ||||||| || |||||| |||||||||| |||||| ||||||||||||| ||||  |||||||||||||||| ||||||    
T  25258212 ttggttcgtggacataaattgtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatcttggagaagctctgataccatcttagaaatcg 25258311  T
Q  1157 taattgagcctaacacaaccatacaaaatcgaattgt 1193  Q
    |  |||||  ||||||||||  |||||| ||| ||||    
T  25258312 tggttgagtttaacacaaccccacaaaaccgacttgt 25258348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 1057 - 1193
Target Start/End: Original strand, 25322002 - 25322138
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  ||||||| || |||||| |||||||||| |||||| ||||||||||||| ||||  |||||||||||||||| ||||||    
T  25322002 ttggttcgtggacataaattgtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatcttggagaagctctgataccatcttagaaatcg 25322101  T
Q  1157 taattgagcctaacacaaccatacaaaatcgaattgt 1193  Q
    |  |||||  ||||||||||  |||||| ||| ||||    
T  25322102 tggttgagtttaacacaaccccacaaaaccgacttgt 25322138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 9e-21
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Original strand, 41666903 - 41667023
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagag-agactctgataccatcttaaaaatc 1155  Q
    ||||||||| |||||||||  |||||||||| ||| || |||||||||| |||||| ||||| ||||||| ||| || |||||||||||||||| |||||    
T  41666903 ttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggcccaacggatcttggaggaggctctgataccatcttagaaatc 41667002  T
Q  1156 gtaattgagcctaacacaacc 1176  Q
    ||  ||| |||||||||||||    
T  41667003 gtggttgggcctaacacaacc 41667023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Original strand, 6919340 - 6919459
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  || |||| || | |||| |||||||||| ||| |||| |||||||||||  |||| || ||||||||||||||||||||    
T  6919340 ttggttcgtggacataaatggtgagtggtccgaaagcggaaacctgatagcagatgactcaatggatcttgaagaggctttgataccatcttaaaaatcg 6919439  T
Q  1157 taattgagcctaacacaacc 1176  Q
    |  |||||||||||||||||    
T  6919440 tggttgagcctaacacaacc 6919459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 1049 - 1176
Target Start/End: Complemental strand, 9368776 - 9368649
Alignment:
Q  1049 tattgagtttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatctt 1148  Q
    ||||| ||||||||||| |||||| ||  ||||||| ||||||||| |||||||||| |||||| |||||||||||||  |||| ||||||||||| |||    
T  9368776 tattgggtttggttcgtggacatacatggtgggtggtccaatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccacctt 9368677  T
Q  1149 aaaaatcgtaattgagcctaacacaacc 1176  Q
    | ||||  |  ||| |||||||||||||    
T  9368676 agaaattatggttgggcctaacacaacc 9368649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 56 - 253
Target Start/End: Original strand, 25917749 - 25917945
Alignment:
Q  56 gtgatacgtttcaaaaacttttgaattgtaccatttgaagtcagaaacttctaatgatacgattcaaacactggtgaatcgattcatacactgaaaaatg 155  Q
    |||||||| ||||||||||| ||||| ||  |||| |||||||||| ||||| ||||||||||||| | |||  ||||||||||||   |  | |||| |    
T  25917749 gtgatacgattcaaaaacttgtgaatcgtttcattagaagtcagaaccttcttatgatacgattcacatacttatgaatcgattcagtga--gtaaaaag 25917846  T
Q  156 atga-ataaggctaagttccatatatgtgaacaatgcacaagacaccaatgaatcctaggtcaatgagacatagttgctaggtgatgtaacatgactat 253  Q
    |||| ||| || |||||| || |||||| ||||||||||| ||||| ||| ||||||||   ||||||||||||||| | |||| | ||||| ||||||    
T  25917847 atgagatatggttaagtttcaaatatgtaaacaatgcacatgacacaaataaatcctagaataatgagacatagttgttgggtgctttaacaagactat 25917945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 1049 - 1176
Target Start/End: Original strand, 32908855 - 32908982
Alignment:
Q  1049 tattgagtttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatctt 1148  Q
    ||||| |||||||||||||||||||||  |||||| ||| |||||  |||||||||| ||| || |||||||||||||  |||| |||| ||| ||||||    
T  32908855 tattgggtttggttcgttgacataaatggtgggtgacccgatagcagaaacctgatagcagatggcccaatggatcttgaagaggctctaatatcatctt 32908954  T
Q  1149 aaaaatcgtaattgagcctaacacaacc 1176  Q
    | |||| ||  ||||| |||||||||||    
T  32908955 agaaattgtggttgagtctaacacaacc 32908982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 1057 - 1187
Target Start/End: Complemental strand, 24531772 - 24531642
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  |||||||  | ||| |  ||| |||||| |||||| ||||||||||| ||||||| |||||||||||||||| ||||||    
T  24531772 ttggttcgtggacataaatgttgggtggttcgataacagaaaactgatagcaggtggcccaatggatcatagagaggctctgataccatcttagaaatcg 24531673  T
Q  1157 taattgagcctaacacaaccatacaaaatcg 1187  Q
    |  ||| || ||||||||||  |||||||||    
T  24531672 tggttgggcataacacaaccccacaaaatcg 24531642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1096 - 1193
Target Start/End: Original strand, 2063684 - 2063781
Alignment:
Q  1096 aaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaatcgaattgt 1193  Q
    ||||||||||||| |||| ||||||||||||  |||| |||||||||||||||| |||||||  ||| |||||||||||||  |||||| ||| ||||    
T  2063684 aaacctgataacatgtgatccaatggatcttgaagaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccgacttgt 2063781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 1057 - 1155
Target Start/End: Original strand, 20510788 - 20510885
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatc 1155  Q
    ||||||||| |||||||||   |||||||||||||||  |||||||||| |||||  |||| |||||||| ||||  ||||||||||||||||||||||    
T  20510788 ttggttcgtggacataaatgg-gggtggcccaatagcagaaacctgatagcaggtagcccagtggatcttggagacgctctgataccatcttaaaaatc 20510885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1057 - 1171
Target Start/End: Original strand, 26137255 - 26137370
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagag-agactctgataccatcttaaaaatc 1155  Q
    ||||||||| ||||||||| ||||||||||| || | |||||||||||| |||||| |||||   ||||| ||| || ||||||||||| |||| |||||    
T  26137255 ttggttcgtggacataaatgatgggtggcccgatggtgaaaacctgatagcaggtggcccaacaaatcttggagtaggctctgataccaccttagaaatc 26137354  T
Q  1156 gtaattgagcctaaca 1171  Q
    ||  ||| ||||||||    
T  26137355 gtggttgggcctaaca 26137370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 1049 - 1126
Target Start/End: Original strand, 13700728 - 13700805
Alignment:
Q  1049 tattgagtttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatctt 1126  Q
    ||||| |||||||||||   |||||||  |||||||||  |||||| |||||||||| ||||||||||||||||||||    
T  13700728 tattgggtttggttcgtgatcataaatggtgggtggcctgatagcggaaacctgatagcaggtgacccaatggatctt 13700805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1057 - 1157
Target Start/End: Original strand, 6413568 - 6413668
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  |||||||| | |||| | | |||||||| |||||| |||||||||||||  |||| || ||||||||| ||| ||||||    
T  6413568 ttggttcgtggacataaatggtgggtggctcgatagtggatacctgatagcaggtggcccaatggatcttgaagaggctttgataccatattagaaatcg 6413667  T
Q  1157 t 1157  Q
    |    
T  6413668 t 6413668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1068 - 1176
Target Start/End: Complemental strand, 8098479 - 8098371
Alignment:
Q  1068 acataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcct 1167  Q
    |||||||| | ||||||||| ||| || ||||||||||||||||| ||||| | ||| |  |||| |||||||||||| ||| |||||||  ||| || |    
T  8098479 acataaatgacgggtggcccgataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatattagaaatcgtggttgggctt 8098380  T
Q  1168 aacacaacc 1176  Q
    |||||||||    
T  8098379 aacacaacc 8098371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1082 - 1148
Target Start/End: Complemental strand, 411726 - 411660
Alignment:
Q  1082 tggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatctt 1148  Q
    |||||| |||||||  |||||||| || ||| |||||||||||||||| || |||||||||||||||    
T  411726 tggcccgatagcgattacctgatagcatgtggcccaatggatcttagataggctctgataccatctt 411660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Original strand, 11896614 - 11896712
Alignment:
Q  1078 tgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 1176  Q
    ||||||| || |||||||||||||||||||||||  | |||||||| ||  ||||  ||||||||||| ||| |||||||  || | ||||||||||||    
T  11896614 tgggtggtccgatagcgaaaacctgataacaggtatctcaatggattttgaagaggttctgataccatattagaaatcgtggttaaacctaacacaacc 11896712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1057 - 1141
Target Start/End: Original strand, 11896302 - 11896386
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgata 1141  Q
    ||||||||| |||||||||  ||||||| || |||||| ||||||||||  ||||| | ||||||||||| |||||  |||||||    
T  11896302 ttggttcgtggacataaatggtgggtggtccgatagcggaaacctgatagtaggtggcacaatggatcttggagaggttctgata 11896386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 19221004 - 19220924
Alignment:
Q  41 tgaatcgattcagtagtgatacgtttcaaaaacttttgaattgtaccatttgaagtcagaaacttctaatgatacgattca 121  Q
    ||||||||||||  |||||||||  ||||||  || ||||| ||| |||| ||||||||| || |||||||||||||||||    
T  19221004 tgaatcgattcacaagtgatacgactcaaaaggttgtgaatcgtatcattggaagtcagagacctctaatgatacgattca 19220924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1057 - 1144
Target Start/End: Original strand, 8081260 - 8081347
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgatacca 1144  Q
    ||||||||| |||||||||  ||||||| || |||| | | |||||||| |||||| |||||| |||||| ||||  |||||||||||    
T  8081260 ttggttcgtggacataaatggtgggtggtccgataggggatacctgatagcaggtggcccaatcgatcttggagaagctctgatacca 8081347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 141
Target Start/End: Complemental strand, 24660157 - 24660058
Alignment:
Q  42 gaatcgattcagtagtgatacgtttcaaaaacttttgaattgtaccatttgaagtcagaaacttctaatgatacgattcaaacactggtgaatcgattca 141  Q
    ||||||||||| | ||||| |||||||||   |  ||||| ||  ||||||||||||||||||||  |||||||||||||||   || ||||||||||||    
T  24660157 gaatcgattcaatggtgatgcgtttcaaattttggtgaatcgtttcatttgaagtcagaaacttcagatgatacgattcaaagtatgatgaatcgattca 24660058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1102 - 1148
Target Start/End: Original strand, 30770226 - 30770272
Alignment:
Q  1102 gataacaggtgacccaatggatcttagagagactctgataccatctt 1148  Q
    |||| |||||| ||||||||||||| ||||| |||||||||||||||    
T  30770226 gatagcaggtggcccaatggatcttggagaggctctgataccatctt 30770272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1057 - 1154
Target Start/End: Original strand, 17352580 - 17352676
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaat 1154  Q
    ||||||||| ||||||||   | |||| |||||||||| |||||||||| || ||| | ||| |||||||  |||| |||||||||||||||| ||||    
T  17352580 ttggttcgtggacataaacggtaggtgacccaatagcggaaacctgatagcaagtggctcaa-ggatcttgaagaggctctgataccatcttagaaat 17352676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1115 - 1176
Target Start/End: Complemental strand, 24528655 - 24528594
Alignment:
Q  1115 ccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 1176  Q
    |||||||||| | ||||| |||||||||||||||| ||||| |  ||| |||||||||||||    
T  24528655 ccaatggatcatggagaggctctgataccatcttagaaatcatggttgggcctaacacaacc 24528594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1068 - 1157
Target Start/End: Original strand, 27133149 - 27133238
Alignment:
Q  1068 acataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgt 1157  Q
    |||||||| | ||||| ||| ||| || ||||||||||||||||| ||||| | ||| |  |||| |||||||||||| ||| |||||||    
T  27133149 acataaatgacgggtgacccgataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatattagaaatcgt 27133238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 2e-31; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 2e-31
Query Start/End: Original strand, 684 - 798
Target Start/End: Complemental strand, 24000254 - 24000141
Alignment:
Q  684 aagaagctcttgcttatttaaagcaagaggtatccaagatatctagtttcctacggatttttgagaaaagacttggatggtagtggttttgtaaaaatgt 783  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||| ||||| || | ||||||||||||| ||||||||| |||||||||||||| |    
T  24000254 aagaagctcttgcttatttaaggcaagaggtatccaagatacctagttccctacaga-tcttgagaaaagactcggatggtaggggttttgtaaaaatat 24000156  T
Q  784 cagcaagctgatttt 798  Q
    ||||||| |||||||    
T  24000155 cagcaagttgatttt 24000141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 1e-29
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Complemental strand, 13353374 - 13353255
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  |||||||||| |||||| ||||||||||||||||| ||||||||||||| ||||| |||||||||||||||| |||| |    
T  13353374 ttggttcgtggacataaatggtgggtggcccgatagcggaaacctgataacaggtggcccaatggatcttggagaggctctgataccatcttagaaatgg 13353275  T
Q  1157 taattgagcctaacacaacc 1176  Q
    |  ||| |||||||||||||    
T  13353274 tggttgggcctaacacaacc 13353255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 1e-29
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Complemental strand, 33796499 - 33796380
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  |||||||||| |||||| ||||||||||||||||| ||||||||||||| ||||| |||||||||||||||| |||| |    
T  33796499 ttggttcgtggacataaatggtgggtggcccgatagcggaaacctgataacaggtggcccaatggatcttggagaggctctgataccatcttagaaatgg 33796400  T
Q  1157 taattgagcctaacacaacc 1176  Q
    |  ||| |||||||||||||    
T  33796399 tggttgggcctaacacaacc 33796380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 4e-29
Query Start/End: Original strand, 684 - 798
Target Start/End: Complemental strand, 23998890 - 23998777
Alignment:
Q  684 aagaagctcttgcttatttaaagcaagaggtatccaagatatctagtttcctacggatttttgagaaaagacttggatggtagtggttttgtaaaaatgt 783  Q
    ||||||| ||||||||||||| ||||||||||||||||||| |||||| ||||| ||| || ||||||||||| ||||||||| |||||||||||||| |    
T  23998890 aagaagcacttgcttatttaaggcaagaggtatccaagatacctagttccctacagatctt-gagaaaagactcggatggtaggggttttgtaaaaatat 23998792  T
Q  784 cagcaagctgatttt 798  Q
    ||||||| |||||||    
T  23998791 cagcaagttgatttt 23998777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 4e-29
Query Start/End: Original strand, 684 - 798
Target Start/End: Complemental strand, 23999572 - 23999459
Alignment:
Q  684 aagaagctcttgcttatttaaagcaagaggtatccaagatatctagtttcctacggatttttgagaaaagacttggatggtagtggttttgtaaaaatgt 783  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||| ||||| || | ||||||||||||| |||||||||  ||||||||||||| |    
T  23999572 aagaagctcttgcttatttaaggcaagaggtatccaagatacctagttccctacaga-tcttgagaaaagactcggatggtaggagttttgtaaaaatat 23999474  T
Q  784 cagcaagctgatttt 798  Q
    ||||||| |||||||    
T  23999473 cagcaagttgatttt 23999459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 9e-27
Query Start/End: Original strand, 684 - 786
Target Start/End: Complemental strand, 23986653 - 23986552
Alignment:
Q  684 aagaagctcttgcttatttaaagcaagaggtatccaagatatctagtttcctacggatttttgagaaaagacttggatggtagtggttttgtaaaaatgt 783  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||| ||||| || | ||||||||||||| ||||||||| |||||||||||||| |    
T  23986653 aagaagctcttgcttatttaaggcaagaggtatccaagatacctagttccctacaga-tcttgagaaaagactcggatggtaggggttttgtaaaaatat 23986555  T
Q  784 cag 786  Q
    |||    
T  23986554 cag 23986552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Original strand, 12330090 - 12330209
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  |||||||||| || ||| |||||||||| |||||| ||||||||||||| ||||| |||||||||||| ||| ||||||    
T  12330090 ttggttcgtggacataaatggtgggtggcccgatggcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatattagaaatcg 12330189  T
Q  1157 taattgagcctaacacaacc 1176  Q
    |  ||| |||||||||||||    
T  12330190 tggttgggcctaacacaacc 12330209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 1057 - 1151
Target Start/End: Complemental strand, 30505675 - 30505581
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaa 1151  Q
    ||||||||| |||||||| |||||||||| | |||| | |||||||||| |||||||||||||| ||||| ||||| |||||||||||| |||||    
T  30505675 ttggttcgtagacataaagaatgggtggcacgataggggaaacctgatagcaggtgacccaatgcatcttggagaggctctgataccatgttaaa 30505581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Original strand, 4868723 - 4868843
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagag-agactctgataccatcttaaaaatc 1155  Q
    ||||||||| |||||||||  |||||||||| ||| || |||||||||| |||||| ||||  ||||||| ||| || |||||||||||||||| |||||    
T  4868723 ttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggcccagcggatcttggaggaggctctgataccatcttagaaatc 4868822  T
Q  1156 gtaattgagcctaacacaacc 1176  Q
    ||  ||| |||||||||||||    
T  4868823 gtggttgggcctaacacaacc 4868843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1056 - 1176
Target Start/End: Original strand, 6237617 - 6237737
Alignment:
Q  1056 tttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatc 1155  Q
    |||||||||| |||||||||  ||||||| || |||||| ||||||| || || |||  ||||||||||||  ||||||||| ||||||||||| || ||    
T  6237617 tttggttcgtggacataaatggtgggtggtccgatagcggaaacctggtagcaagtggtccaatggatcttgaagagactctaataccatcttagaagtc 6237716  T
Q  1156 gtaattgagcctaacacaacc 1176  Q
    || |||||| |||||||||||    
T  6237717 gtgattgagtctaacacaacc 6237737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Original strand, 6542854 - 6542973
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  |||||| ||| ||| || |||||||||| || |||||||||||||||||  |||| |||||||||||||||  ||||||    
T  6542854 ttggttcgtggacataaatggtgggtgacccgataacggaaacctgatagcaagtgacccaatggatcttgaagaggctctgataccatctttgaaatcg 6542953  T
Q  1157 taattgagcctaacacaacc 1176  Q
    |  ||| | |||||||||||    
T  6542954 tggttgggtctaacacaacc 6542973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 1049 - 1155
Target Start/End: Original strand, 33631708 - 33631814
Alignment:
Q  1049 tattgagtttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatctt 1148  Q
    ||||||| |||||| || |||||||||  |||||| ||| |||||  |||||||||| ||||||||||||| |||||| ||||  |||||||| ||||||    
T  33631708 tattgagcttggttagtggacataaatggtgggtgtcccgatagcagaaacctgatatcaggtgacccaatagatcttggagatgctctgatatcatctt 33631807  T
Q  1149 aaaaatc 1155  Q
    |||||||    
T  33631808 aaaaatc 33631814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 1057 - 1193
Target Start/End: Complemental strand, 3680185 - 3680049
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    |||||| || |||||||||  ||| || ||| |||||| |||||| ||| |||||||||| |||||| || |||||  ||||||||||||||| |||| |    
T  3680185 ttggtttgtggacataaatggtggatgacccgatagcggaaacctaatagcaggtgacccgatggattttggagagggtctgataccatcttagaaattg 3680086  T
Q  1157 taattgagcctaacacaaccatacaaaatcgaattgt 1193  Q
    |  ||| |||||||||||||  |||||||||| ||||    
T  3680085 tggttgggcctaacacaaccccacaaaatcgacttgt 3680049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 1057 - 1145
Target Start/End: Original strand, 17147806 - 17147894
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccat 1145  Q
    ||||||||| |||||||||  |||||| ||  |||||| |||||||||| ||||||||||||||||| || ||||| ||||||||||||    
T  17147806 ttggttcgtggacataaatggtgggtgacctgatagcggaaacctgatagcaggtgacccaatggatgttggagaggctctgataccat 17147894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Complemental strand, 33494712 - 33494593
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    |||||||||  |||||||   |||||||||| |||| | |||||||||| |||||||||||||||||||   ||||  ||||||||||||||| |||| |    
T  33494712 ttggttcgtgaacataaacggtgggtggcccgatagtggaaacctgatagcaggtgacccaatggatctcgaagaggttctgataccatcttagaaatgg 33494613  T
Q  1157 taattgagcctaacacaacc 1176  Q
    |  ||| |||||||||||||    
T  33494612 tggttgggcctaacacaacc 33494593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 1067 - 1185
Target Start/End: Complemental strand, 32290891 - 32290773
Alignment:
Q  1067 gacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcc 1166  Q
    |||||||||  |||||||||| |||||||||| ||||||  ||||| ||| |||||| || ||||  |||| ||||||||||| |||||||  ||  |||    
T  32290891 gacataaatggtgggtggcccgatagcgaaaatctgatagtaggtggcccgatggatattggagatgctctaataccatcttagaaatcgttgtttggcc 32290792  T
Q  1167 taacacaaccatacaaaat 1185  Q
    |||||||||| ||||||||    
T  32290791 taacacaaccctacaaaat 32290773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1057 - 1157
Target Start/End: Original strand, 6400766 - 6400865
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  ||||||| || |||||  |||||||||| |||||||||| || ||| || ||||| || ||||||||||||||||||||    
T  6400766 ttggttcgtggacataaatggtgggtggtccgatagcagaaacctgatagcaggtgaccc-atagattttggagaggctttgataccatcttaaaaatcg 6400864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1052 - 1176
Target Start/End: Original strand, 7638754 - 7638878
Alignment:
Q  1052 tgagtttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaa 1151  Q
    |||| ||||||||| ||||||||| |||||||  |  |||||| |||||||||| ||||||| ||||| |||||| ||||  |||||||| | ||||| |    
T  7638754 tgagcttggttcgtagacataaatgatgggtgatctgatagcggaaacctgatagcaggtgatccaatagatcttggagaagctctgatatcttcttaga 7638853  T
Q  1152 aatcgtaattgagcctaacacaacc 1176  Q
    |||| || |||  ||||||||||||    
T  7638854 aatcatagttggacctaacacaacc 7638878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1086 - 1188
Target Start/End: Original strand, 8001489 - 8001592
Alignment:
Q  1086 ccaatagcgaaaacctgataacaggtgacccaatggatcttagag-agactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaa 1184  Q
    |||||| || |||||||||| |||||| ||||| |||||||  || ||||||||||||||||||| |||| ||  ||| |||||||||||||  ||||||    
T  8001489 ccaatatcggaaacctgatagcaggtggcccaacggatctttaaggagactctgataccatcttagaaattgtggttgggcctaacacaacccaacaaaa 8001588  T
Q  1185 tcga 1188  Q
    ||||    
T  8001589 tcga 8001592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 863 - 930
Target Start/End: Complemental strand, 23986166 - 23986099
Alignment:
Q  863 aatctcagtatgcttagtctttgaatgtaaggctgggtttttggtgagatttatagcactagtgttat 930  Q
    ||||||| |||| |||||| ||||||||||  | ||||||||||||||||| ||||||||||||||||    
T  23986166 aatctcaatatgtttagtccttgaatgtaaaacagggtttttggtgagattaatagcactagtgttat 23986099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1049 - 1175
Target Start/End: Complemental strand, 24554297 - 24554172
Alignment:
Q  1049 tattgagtttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatctt 1148  Q
    ||||||| |||||||||||||||||||  ||||||| |  ||||||  ||||||||| ||||||  ||||||||||||  ||| ||||||||||||| ||    
T  24554297 tattgagcttggttcgttgacataaatggtgggtggtctgatagcggtaacctgatagcaggtg-gccaatggatcttgaagacactctgataccatgtt 24554199  T
Q  1149 aaaaatcgtaattgagcctaacacaac 1175  Q
    | ||||  |  ||||| ||||||||||    
T  24554198 agaaattatggttgagactaacacaac 24554172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1059 - 1161
Target Start/End: Original strand, 30849315 - 30849417
Alignment:
Q  1059 ggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgta 1158  Q
    ||||||| |||||||||  || ||||| || ||||| |||||| ||| ||||||  ||||||||||||| || |||| ||||| ||||||| ||||||||    
T  30849315 ggttcgtggacataaatggtgagtggctcattagcggaaacctaatagcaggtggtccaatggatcttaaagggactttgatatcatcttagaaatcgta 30849414  T
Q  1159 att 1161  Q
    |||    
T  30849415 att 30849417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 1067 - 1184
Target Start/End: Complemental strand, 3921720 - 3921604
Alignment:
Q  1067 gacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcc 1166  Q
    ||||||||| ||||| |||||| ||||| |||| ||||| ||||||| ||||||||||||  |||| |||||||||||| ||| ||||| |  || | ||    
T  3921720 gacataaatgatgggcggccca-tagcggaaacttgatagcaggtgatccaatggatcttgaagaggctctgataccatattagaaatcatggttaaacc 3921622  T
Q  1167 taacacaaccatacaaaa 1184  Q
    |||||| ||| |||||||    
T  3921621 taacacgaccctacaaaa 3921604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 1068 - 1173
Target Start/End: Complemental strand, 19712878 - 19712773
Alignment:
Q  1068 acataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcct 1167  Q
    |||||||| | ||||| ||||||| || ||||||||||||||||| ||||| | ||| |  |||| |||||||||||||||| |||| ||  ||| ||||    
T  19712878 acataaatgacgggtgacccaataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatcttagaaatggtggttgggcct 19712779  T
Q  1168 aacaca 1173  Q
    ||||||    
T  19712778 aacaca 19712773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1068 - 1176
Target Start/End: Complemental strand, 8026550 - 8026443
Alignment:
Q  1068 acataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcct 1167  Q
    |||||||||| |||||||| | || |||||||||||||||||||| |||||   ||| |  |||| |||||||||||| ||| |||||||  ||| ||||    
T  8026550 acataaataacgggtggccga-taacgaaaacctgataacaggtggcccaacaaatcgtgaagaggctctgataccatattagaaatcgtggttgggcct 8026452  T
Q  1168 aacacaacc 1176  Q
    |||||||||    
T  8026451 aacacaacc 8026443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1089 - 1176
Target Start/End: Complemental strand, 11085722 - 11085635
Alignment:
Q  1089 atagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 1176  Q
    |||||| |||||||||| |||||| ||||| | ||||| ||||| |||| | ||||||||| ||||||| ||||  ||||||||||||    
T  11085722 atagcggaaacctgatagcaggtggcccaacgtatcttggagaggctctaaaaccatcttagaaatcgtgattggacctaacacaacc 11085635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Complemental strand, 13740854 - 13740735
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    |||||| || || ||||||  |||||||||| |||| ||||||||||||   ||||||| ||||||||||  |||| |||| |||  || ||| ||||||    
T  13740854 ttggtttgtggatataaattgtgggtggcccgatagggaaaacctgatagatggtgacctaatggatcttgcagaggctctaatataatattagaaatcg 13740755  T
Q  1157 taattgagcctaacacaacc 1176  Q
    |  |||||||||||||||||    
T  13740754 tggttgagcctaacacaacc 13740735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Complemental strand, 13746354 - 13746235
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    |||||| || || ||||||  |||||||||| |||| ||||||||||||   ||||||| ||||||||||  |||| |||| |||  || ||| ||||||    
T  13746354 ttggtttgtggatataaattgtgggtggcccgatagggaaaacctgatagatggtgacctaatggatcttgcagaggctctaatataatattagaaatcg 13746255  T
Q  1157 taattgagcctaacacaacc 1176  Q
    |  |||||||||||||||||    
T  13746254 tggttgagcctaacacaacc 13746235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1068 - 1187
Target Start/End: Complemental strand, 21690884 - 21690765
Alignment:
Q  1068 acataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcct 1167  Q
    |||||||| | | ||||||| ||| || |||| |||||||||||| ||||| | ||| |  |||| || ||||||||| ||| |||||||  ||||||||    
T  21690884 acataaatgacgtgtggcccgataacggaaacatgataacaggtggcccaaagaatcgtgaagaggctttgataccatattagaaatcgtggttgagcct 21690785  T
Q  1168 aacacaaccatacaaaatcg 1187  Q
    |||||||||  |||||||||    
T  21690784 aacacaaccccacaaaatcg 21690765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1089 - 1158
Target Start/End: Original strand, 27993584 - 27993654
Alignment:
Q  1089 atagcgaaaacctgataacaggtgacccaatggatcttagaga-gactctgataccatcttaaaaatcgta 1158  Q
    |||||| ||||||||| | | |||||| |||||||||| |||| |||||||||||||| ||||||||||||    
T  27993584 atagcggaaacctgatgataagtgacctaatggatcttggagaagactctgataccattttaaaaatcgta 27993654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1079 - 1176
Target Start/End: Complemental strand, 30256729 - 30256632
Alignment:
Q  1079 gggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 1176  Q
    ||||||| | ||| ||||||||||||| || | | |||||||||| || || || ||||||||||| |||| |||||||  ||| |||||||||||||    
T  30256729 gggtggctcgatatcgaaaacctgatagcatgcggcccaatggattttggaaaggctctgataccaccttagaaatcgtggttgggcctaacacaacc 30256632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1057 - 1141
Target Start/End: Complemental strand, 31961116 - 31961032
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgata 1141  Q
    ||||| ||| |||||||||  |||| ||| | |||||  |||||||||| |||||| ||||||||||||| ||||| ||||||||    
T  31961116 ttggtccgtggacataaatggtggggggcacgatagcagaaacctgatagcaggtggcccaatggatcttggagaggctctgata 31961032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1067 - 1193
Target Start/End: Complemental strand, 9705184 - 9705057
Alignment:
Q  1067 gacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagag-agactctgataccatcttaaaaatcgtaattgagc 1165  Q
    |||||||||  |||||||||| |||  | |||||||||| |||||| |||||   ||||| ||| || |||||||||||||||| |||| ||  ||| ||    
T  9705184 gacataaatggtgggtggcccgataatggaaacctgatagcaggtggcccaacaaatcttggaggaggctctgataccatcttagaaatggtggttgggc 9705085  T
Q  1166 ctaacacaaccatacaaaatcgaattgt 1193  Q
    |||||||||||  |||||| ||| ||||    
T  9705084 ctaacacaaccccacaaaaccgacttgt 9705057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1068 - 1157
Target Start/End: Original strand, 5572538 - 5572627
Alignment:
Q  1068 acataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgt 1157  Q
    |||||||| | ||||||||| ||| || ||||||||||||||| | ||||| | ||| |  |||| |||||||||||| ||| |||||||    
T  5572538 acataaatgacgggtggcccgataacggaaacctgataacaggcggcccaaagaatcgtgaagaggctctgataccatattagaaatcgt 5572627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1131 - 1184
Target Start/End: Original strand, 10145735 - 10145788
Alignment:
Q  1131 agactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaa 1184  Q
    ||||||||||| ||||||| |||| ||  ||||||||||||||||| |||||||    
T  10145735 agactctgatatcatcttagaaattgtggttgagcctaacacaaccctacaaaa 10145788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 9e-27; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 9e-27
Query Start/End: Original strand, 1058 - 1176
Target Start/End: Complemental strand, 30370007 - 30369889
Alignment:
Q  1058 tggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgt 1157  Q
    |||||||| |||||||||  |||||||||| |||| | |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||| |||||||    
T  30370007 tggttcgtggacataaatggtgggtggcccgatagtggaaacctgatagcaggtgacccaatggatcttggagaggctctgatacaatcttagaaatcgt 30369908  T
Q  1158 aattgagcctaacacaacc 1176  Q
      ||| |||||||||||||    
T  30369907 ggttgggcctaacacaacc 30369889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1057 - 1185
Target Start/End: Complemental strand, 38668298 - 38668170
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||| | ||||||||| || |||| ||| |||||  ||||||||||||||||||||||||||||| | ||||| |||||||||||||||| |||| |    
T  38668298 ttggttcatggacataaatgataggtgacccgatagcagaaacctgataacaggtgacccaatggatcatggagaggctctgataccatcttagaaattg 38668199  T
Q  1157 taattgagcctaacacaaccatacaaaat 1185  Q
    | |||| |||||||||||||  |||||||    
T  38668198 tgattgggcctaacacaaccccacaaaat 38668170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 1049 - 1176
Target Start/End: Original strand, 4112909 - 4113036
Alignment:
Q  1049 tattgagtttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatctt 1148  Q
    ||||||| ||||||||| |||||||||  ||||||| ||||||||| ||||||||||   |||| | ||||||||||| ||||| ||| |||||||||||    
T  4112909 tattgagcttggttcgtggacataaatggtgggtggtccaatagcggaaacctgatagatggtggctcaatggatcttggagaggctccgataccatctt 4113008  T
Q  1149 aaaaatcgtaattgagcctaacacaacc 1176  Q
    | |||||||  ||| |||||||||||||    
T  4113009 agaaatcgtggttgggcctaacacaacc 4113036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 691 - 1038
Target Start/End: Original strand, 18578537 - 18578874
Alignment:
Q  691 tcttgcttatttaaagcaagaggtatccaagatatctagtttcctacggatttttgagaaaagacttggatggtagtggttttgtaaaaatgtcagcaag 790  Q
    |||||||| || |||||||| |||||| ||||||  ||||| |||||  || ||| || ||||| |  |||||||  |||| ||||||| ||||||||||    
T  18578537 tcttgctttttgaaagcaagtggtatctaagatacttagttccctacatatcttt-aggaaagagtcagatggtaaaggttatgtaaaactgtcagcaag 18578635  T
Q  791 ctgattttttgtgtcaacgtactcgaatgttacatccttcttttcaacatgatctctgaggaagtgatgccaaatctcagtatgcttagtctttgaatgt 890  Q
     |||   || |||||||  || || || || || || ||||||||||||  |||  | ||||| ||||||||||||||| | || |||||  ||||||||    
T  18578636 ttgacacttagtgtcaaaatattcaaaagtcacgtcattcttttcaacaccatccataaggaaatgatgccaaatctcaatgtgtttagttcttgaatgt 18578735  T
Q  891 aaggctgggtttttggtgagatttatagcactagtgttataacaattagattgaaatgcatcctagttttaaatcatagtcaaggagttgttgtttgatc 990  Q
    ||  || ||||||||||||||||||||||||||||||||| ||| ||| |||| ||  || || | ||||||||||||||    ||||      || | |    
T  18578736 aaaactaggtttttggtgagatttatagcactagtgttatcacattta-attggaacacaaccaaattttaaatcatagt---agagt-----cttaagc 18578826  T
Q  991 cataaaatttgtgagcaacaactcctggctaccacatattcagcctct 1038  Q
    ||||||||||||||||||||||| || || |||||||||||| |||||    
T  18578827 cataaaatttgtgagcaacaactactagccaccacatattcatcctct 18578874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 9e-21
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Complemental strand, 35772202 - 35772083
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatctt-agagagactctgataccatcttaaaaatc 1155  Q
    ||||||||| |||||||||  |||||||||| |||||| |||||||||| ||| || ||||||||||||| ||| || |||||||||||||||| |||||    
T  35772202 ttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatagcagatggcccaatggatcttgaga-aggctctgataccatcttagaaatc 35772104  T
Q  1156 gtaattgagcctaacacaacc 1176  Q
    ||  ||| |||||||||||||    
T  35772103 gtggttgggcctaacacaacc 35772083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 1057 - 1187
Target Start/End: Complemental strand, 16163106 - 16162976
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    |||| |||| |||||||||  | |||||||| |||||| |||||||||| |||||| |||| |||||||| ||||| || ||||| |||||||||||| |    
T  16163106 ttggctcgtggacataaatggtaggtggcccgatagcggaaacctgatagcaggtggcccattggatcttggagaggctttgatatcatcttaaaaattg 16163007  T
Q  1157 taattgagcctaacacaaccatacaaaatcg 1187  Q
    |  ||||| |||||||||||  |||||||||    
T  16163006 tggttgagtctaacacaaccccacaaaatcg 16162976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 1050 - 1176
Target Start/End: Original strand, 51460346 - 51460472
Alignment:
Q  1050 attgagtttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatctta 1149  Q
    |||||||||||||||| |||| ||||  ||||| |||| |||||| |||||||||| |||||| ||||||||||||| ||||| |||||||| ||| |||    
T  51460346 attgagtttggttcgtggacacaaatggtgggtcgcccgatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgatatcatttta 51460445  T
Q  1150 aaaatcgtaattgagcctaacacaacc 1176  Q
     ||||  |  ||| |||||||||||||    
T  51460446 gaaattatggttgggcctaacacaacc 51460472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 1057 - 1154
Target Start/End: Original strand, 4112686 - 4112783
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaat 1154  Q
    |||||||||||||||||||  |||||||  | |||||| |||||||||| ||||||  |||||||||||| ||||| |||||||||||||||| ||||    
T  4112686 ttggttcgttgacataaatggtgggtggttcgatagcggaaacctgatagcaggtggtccaatggatcttggagaggctctgataccatcttagaaat 4112783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 1089 - 1174
Target Start/End: Complemental strand, 38733292 - 38733207
Alignment:
Q  1089 atagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaa 1174  Q
    |||||| |||||||||| ||||||  |||||||||||| |||||||||||||||||||||| |||||||  |||| ||||||||||    
T  38733292 atagcggaaacctgatagcaggtggtccaatggatcttggagagactctgataccatcttagaaatcgtggttgaacctaacacaa 38733207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1068 - 1176
Target Start/End: Original strand, 31496293 - 31496401
Alignment:
Q  1068 acataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcct 1167  Q
    ||||||||  ||||||| || ||||||  ||||||||| ||||||  ||||||||||||| ||||||||| |||| |||||| ||||||| |||||| ||    
T  31496293 acataaatggtgggtggtccgatagcgggaacctgatagcaggtggtccaatggatcttaaagagactctaatactatcttagaaatcgtgattgagtct 31496392  T
Q  1168 aacacaacc 1176  Q
    |||||||||    
T  31496393 aacacaacc 31496401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Original strand, 4098314 - 4098433
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| ||||||||   |||||||||| |||||  |||||||||  |||||| |||||||||||||  |||| ||||||||||| |||| ||||||    
T  4098314 ttggttcgtggacataaagggtgggtggcccgatagcagaaacctgattgcaggtggcccaatggatcttgaagagtctctgataccaacttagaaatcg 4098413  T
Q  1157 taattgagcctaacacaacc 1176  Q
    |  ||| |||||||||||||    
T  4098414 tggttgggcctaacacaacc 4098433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Complemental strand, 26177081 - 26176962
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| || ||||||  ||||||| || |||||| ||| |||||| |||||| ||||||||||||| ||||| |||||||| ||||||| ||||||    
T  26177081 ttggttcgtggatataaatggtgggtggtccgatagcggaaatctgatagcaggtggcccaatggatcttggagaggctctgatatcatcttagaaatcg 26176982  T
Q  1157 taattgagcctaacacaacc 1176  Q
       ||| |||||||||||||    
T  26176981 cggttgggcctaacacaacc 26176962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 1061 - 1187
Target Start/End: Complemental strand, 27413516 - 27413390
Alignment:
Q  1061 ttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaat 1160  Q
    ||||| |||||||||  |||||||||| |||||| ||| |||||||||||||  | ||| |||||| ||||| |||||||| ||||||| |||||||  |    
T  27413516 ttcgtggacataaatggtgggtggcccgatagcggaaatctgataacaggtggtctaatagatcttggagaggctctgatatcatcttagaaatcgtggt 27413417  T
Q  1161 tgagcctaacacaaccatacaaaatcg 1187  Q
    ||  ||||||||||||  |||||||||    
T  27413416 tggacctaacacaacctcacaaaatcg 27413390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 1061 - 1176
Target Start/End: Complemental strand, 33156903 - 33156787
Alignment:
Q  1061 ttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagag-agactctgataccatcttaaaaatcgtaa 1159  Q
    ||||| |||||||||  ||| |||||| |||||| |||||||||| ||||||| |||| ||||||| ||| || |||| ||||||||||| |||||||      
T  33156903 ttcgtggacataaatggtggatggcccgatagcggaaacctgatagcaggtgaaccaacggatcttggagtaggctctaataccatcttagaaatcgtgg 33156804  T
Q  1160 ttgagcctaacacaacc 1176  Q
    ||| |||||||||||||    
T  33156803 ttgggcctaacacaacc 33156787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Original strand, 39348263 - 39348382
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagag-agactctgataccatcttaaaaatc 1155  Q
    ||||||||| |||||||||  ||||||| || |||| | |||||||||| |||||| ||||||||| ||| ||| || |||||||||||||||| |||||    
T  39348263 ttggttcgtggacataaatggtgggtggtccgatagtggaaacctgatagcaggtggcccaatggaccttggaggaggctctgataccatcttagaaatc 39348362  T
Q  1156 gtaattgagcctaacacaacc 1176  Q
    ||  ||| |||||||||||||    
T  39348363 gt-gttgggcctaacacaacc 39348382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1057 - 1140
Target Start/End: Complemental strand, 25713331 - 25713248
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgat 1140  Q
    ||||||||| |||||||||  |||||||||| |||||| |||| ||||| |||||| ||||||||||||| ||||| |||||||    
T  25713331 ttggttcgtggacataaatggtgggtggcccgatagcggaaacttgatagcaggtggcccaatggatcttggagaggctctgat 25713248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 1056 - 1154
Target Start/End: Complemental strand, 7307895 - 7307797
Alignment:
Q  1056 tttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaat 1154  Q
    |||||||||| |||||||||  ||||||| ||||||||| |||||||||| |||  |||||||||||||||  || |||| ||||| ||||||| ||||    
T  7307895 tttggttcgtggacataaatggtgggtggtccaatagcggaaacctgatagcagacgacccaatggatcttgaagtgactatgatatcatcttagaaat 7307797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 1049 - 1151
Target Start/End: Complemental strand, 52961528 - 52961426
Alignment:
Q  1049 tattgagtttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatctt 1148  Q
    ||||||| ||| |||||  |||||| |  |||||||||| |||||| |||||||||| |||||| |||||||||||||  |||| ||||||||||| |||    
T  52961528 tattgagcttgtttcgtgtacataactggtgggtggcccgatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccaactt 52961429  T
Q  1149 aaa 1151  Q
    |||    
T  52961428 aaa 52961426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1096 - 1174
Target Start/End: Complemental strand, 5109384 - 5109306
Alignment:
Q  1096 aaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaa 1174  Q
    ||||||||||  ||||| | ||| | ||||| ||||||||||||||||||||||||||| |||||||  ||||||||||    
T  5109384 aaacctgatagaaggtggctcaacgaatcttggagagactctgataccatcttaaaaattgtaattggacctaacacaa 5109306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 1057 - 1154
Target Start/End: Original strand, 2859538 - 2859635
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaat 1154  Q
    ||||||||| |||||||||  |||||||||| |||||  |||||| |||  ||||| |||||||||||||  |||| |||| ||||||||||| ||||    
T  2859538 ttggttcgtggacataaatggtgggtggcccgatagcagaaacctaatagaaggtggcccaatggatcttgaagaggctctaataccatcttagaaat 2859635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1057 - 1146
Target Start/End: Complemental strand, 369805 - 369714
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggccca-atagcgaaaacctgataacaggtgacccaatggatcttagag-agactctgataccatc 1146  Q
    ||||||||| |||||||||  |||||| |||  |||||| |||||||||| ||| ||| |||||||||||||||| || |||||||||||||    
T  369805 ttggttcgtggacataaatggtgggtgaccccgatagcggaaacctgatagcagctgatccaatggatcttagagtaggctctgataccatc 369714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1101 - 1176
Target Start/End: Original strand, 8870865 - 8870940
Alignment:
Q  1101 tgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 1176  Q
    ||||| |||||| |||||||||| || |||||||||||||||||||||| |||| ||  |||  ||||||||||||    
T  8870865 tgatagcaggtggcccaatggatattggagagactctgataccatcttagaaatggtggttggacctaacacaacc 8870940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1049 - 1176
Target Start/End: Original strand, 25145623 - 25145750
Alignment:
Q  1049 tattgagtttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatctt 1148  Q
    ||||||| ||| ||||| ||||| |||  ||||||| || ||| || |||||||||| ||||||   |||| |||||| ||||| |||||||| ||||||    
T  25145623 tattgagcttgattcgtggacattaatggtgggtggtccgataacggaaacctgatagcaggtgggtcaatagatcttggagaggctctgatatcatctt 25145722  T
Q  1149 aaaaatcgtaattgagcctaacacaacc 1176  Q
    | ||||| |  ||| |||||||||||||    
T  25145723 agaaatcatggttgggcctaacacaacc 25145750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1068 - 1187
Target Start/End: Complemental strand, 51589968 - 51589849
Alignment:
Q  1068 acataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcct 1167  Q
    |||||||| | ||||||||| ||| || |||||| |||| ||||| ||||| | ||| |  |||| |||||||||||| ||| |||||||  ||| ||||    
T  51589968 acataaatgacgggtggcccgataacggaaacctaataataggtggcccaaagaatcgtgaagaggctctgataccatattagaaatcgtggttgggcct 51589869  T
Q  1168 aacacaaccatacaaaatcg 1187  Q
    |||||||||  |||||||||    
T  51589868 aacacaaccccacaaaatcg 51589849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1057 - 1151
Target Start/End: Complemental strand, 26229739 - 26229645
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaa 1151  Q
    ||||||||| |||||||||  |||||| |   ||||||||| |||||||||| ||| | ||||||||| | ||||||||||||| | ||||||||    
T  26229739 ttggttcgtggacataaatggtgggtgacttgatagcgaaatcctgataacaagtggctcaatggatcatggagagactctgatgctatcttaaa 26229645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1115 - 1176
Target Start/End: Complemental strand, 17402697 - 17402636
Alignment:
Q  1115 ccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 1176  Q
    |||||||||||| ||||  ||||||||||||||||||||||||  | | |||||||||||||    
T  17402697 ccaatggatcttggagatgctctgataccatcttaaaaatcgtggtcgggcctaacacaacc 17402636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1096 - 1157
Target Start/End: Original strand, 32783231 - 32783292
Alignment:
Q  1096 aaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgt 1157  Q
    |||||||||| ||||||   |||||||||||  ||||||||||||||||||||| |||||||    
T  32783231 aaacctgatagcaggtggtacaatggatcttgaagagactctgataccatcttagaaatcgt 32783292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1099 - 1176
Target Start/End: Original strand, 51460003 - 51460080
Alignment:
Q  1099 cctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 1176  Q
    ||||||| |||||| ||||||||||||| ||||| | || ||||||||||| |||| ||  ||| |||||||||||||    
T  51460003 cctgatagcaggtggcccaatggatcttggagaggcgctaataccatcttagaaattgtggttgggcctaacacaacc 51460080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1108 - 1176
Target Start/End: Original strand, 17452790 - 17452858
Alignment:
Q  1108 aggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 1176  Q
    ||||| |||||||||| |||||||| |||| ||||||||||| |||||||  ||  |||||||||||||    
T  17452790 aggtggcccaatggattttagagaggctctaataccatcttagaaatcgtggttaggcctaacacaacc 17452858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1068 - 1176
Target Start/End: Complemental strand, 51589154 - 51589046
Alignment:
Q  1068 acataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcct 1167  Q
    |||||||| | ||||||||| ||| || ||||||||||||||||| ||||| | ||| |  |||| || ||||||||| ||| |||| ||  ||| ||||    
T  51589154 acataaatgacgggtggcccgataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctttgataccatattagaaatggtggttgggcct 51589055  T
Q  1168 aacacaacc 1176  Q
    |||||||||    
T  51589054 aacacaacc 51589046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 123
Target Start/End: Complemental strand, 25220471 - 25220389
Alignment:
Q  41 tgaatcgattcagtagtgatacgtttcaaaaacttttgaattgtaccatttgaagtcagaaacttctaatgatacgattcaaa 123  Q
    |||||| |||||  |||||| || ||||||   |||||||| ||  ||||||||||||||||||||  |||||||||||||||    
T  25220471 tgaatcaattcaagagtgatgcgattcaaacttttttgaatcgtttcatttgaagtcagaaacttcagatgatacgattcaaa 25220389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1049 - 1123
Target Start/End: Complemental strand, 39100527 - 39100453
Alignment:
Q  1049 tattgagtttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggat 1123  Q
    ||||| ||||| ||||| |||||||||| |||||| ||| |||   ||||||||||| ||| |||||||||||||    
T  39100527 tattgggtttgattcgtggacataaatagtgggtgacccgataataaaaacctgatagcagatgacccaatggat 39100453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1060 - 1145
Target Start/End: Original strand, 40524789 - 40524874
Alignment:
Q  1060 gttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccat 1145  Q
    |||||| ||||||||   ||||||| |  ||||||||||| ||||| ||| ||| ||||||||||||  |||| ||||||||||||    
T  40524789 gttcgtggacataaacggtgggtggtctgatagcgaaaacttgatagcagatgaaccaatggatcttgaagaggctctgataccat 40524874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 60; Significance: 6e-25; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Original strand, 5665 - 5784
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  ||||||| || |||||| |||||||||| |||||| | ||||||||||| ||||| |||||||||||||||| ||||||    
T  5665 ttggttcgtggacataaatggtgggtggtccgatagcggaaacctgatagcaggtggctcaatggatcttggagaggctctgataccatcttagaaatcg 5764  T
Q  1157 taattgagcctaacacaacc 1176  Q
    |  ||| |||||||||||||    
T  5765 tggttgggcctaacacaacc 5784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 60; Significance: 6e-25; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Complemental strand, 2089 - 1970
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  |||||| | | |||||| ||||||||||||||||| ||||||||||||| ||||| |||||||||||||||| |||| |    
T  2089 ttggttcgtggacataaatggtgggtgactcgatagcggaaacctgataacaggtggcccaatggatcttggagaggctctgataccatcttagaaatgg 1990  T
Q  1157 taattgagcctaacacaacc 1176  Q
    |  ||| |||||||||||||    
T  1989 tggttgggcctaacacaacc 1970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 60; Significance: 6e-25; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 1052 - 1187
Target Start/End: Original strand, 41112 - 41247
Alignment:
Q  1052 tgagtttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaa 1151  Q
    ||||||| |||||| | |||||||| |||||||  | |||||| |||| ||||| |||||| ||||||| ||||| ||||| |||||||||||||||| |    
T  41112 tgagtttagttcgtgggcataaatagtgggtggttcgatagcgcaaacttgatagcaggtggcccaatgaatcttggagaggctctgataccatcttaga 41211  T
Q  1152 aatcgtaattgagcctaacacaaccatacaaaatcg 1187  Q
    ||||||| |||||||||| ||||||  |||||||||    
T  41212 aatcgtagttgagcctaatacaaccccacaaaatcg 41247  T

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Target: chr8 (Bit Score: 60; Significance: 6e-25; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Original strand, 11232340 - 11232459
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  |||||| | | |||||| ||||||||||||||||| ||||||||||||| ||||| |||||||||||||||| |||| |    
T  11232340 ttggttcgtggacataaatggtgggtgactcgatagcggaaacctgataacaggtggcccaatggatcttggagaggctctgataccatcttagaaatgg 11232439  T
Q  1157 taattgagcctaacacaacc 1176  Q
    |  ||| |||||||||||||    
T  11232440 tggttgggcctaacacaacc 11232459  T

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Target: chr8; HSP #2
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Complemental strand, 20301434 - 20301315
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  ||||||| || |||||| |||||||||| |||||| |||||||||||||  |||| |||||||||||||||| ||||||    
T  20301434 ttggttcgtagacataaatggtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccatcttagaaatcg 20301335  T
Q  1157 taattgagcctaacacaacc 1176  Q
    |  ||| |||||||||||||    
T  20301334 tggttgggcctaacacaacc 20301315  T

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Target: chr8; HSP #3
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Complemental strand, 21088066 - 21087947
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  ||||||| || |||||| |||||||||| |||||| |||||||||||||  |||| |||||||||||||||| ||||||    
T  21088066 ttggttcgtagacataaatggtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccatcttagaaatcg 21087967  T
Q  1157 taattgagcctaacacaacc 1176  Q
    |  ||| |||||||||||||    
T  21087966 tggttgggcctaacacaacc 21087947  T

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Target: chr8; HSP #4
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 1049 - 1184
Target Start/End: Complemental strand, 31197795 - 31197661
Alignment:
Q  1049 tattgagtttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatctt 1148  Q
    ||||||| ||||||||| |||||||||  ||||||| || |||||| |||||||||| |||||| ||||||||||||  ||||| |||||||||||||||    
T  31197795 tattgagcttggttcgtggacataaatggtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatctcggagaggctctgataccatctt 31197696  T
Q  1149 aaaaatcgtaattgagcctaacacaaccatacaaaa 1184  Q
    | ||||| |  ||| ||||||||||||| |||||||    
T  31197695 agaaatc-tggttgggcctaacacaaccctacaaaa 31197661  T

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Target: chr8; HSP #5
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 1057 - 1175
Target Start/End: Complemental strand, 8084300 - 8084182
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  ||||||  |||||||||||||||||||| || ||| ||||||||||||| ||||| |||||||||||||||| ||||||    
T  8084300 ttggttcgtggacataaatggtgggtgatccaatagcgaaaacctgatagcatgtggcccaatggatcttggagaggctctgataccatcttagaaatcg 8084201  T
Q  1157 taattgagcctaacacaac 1175  Q
    |  ||| | ||||||||||    
T  8084200 tggttgggtctaacacaac 8084182  T

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Target: chr8; HSP #6
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 1057 - 1149
Target Start/End: Original strand, 18004240 - 18004332
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatctta 1149  Q
    ||||||||| |||||||||  |||||||||| |||||| |||||||||| |||||| ||||||||||||| ||||| ||||||||||||||||    
T  18004240 ttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatctta 18004332  T

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Target: chr8; HSP #7
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Original strand, 3157470 - 3157589
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  |||||| ||| ||||||||||||||||| ||||||  ||||||||| || ||||| |||||||| ||||||| |||| |    
T  3157470 ttggttcgtggacataaatggtgggtgtcccgatagcgaaaacctgatagcaggtggtccaatggattttggagaggctctgatatcatcttataaatgg 3157569  T
Q  1157 taattgagcctaacacaacc 1176  Q
    |  |||||||||||||||||    
T  3157570 tggttgagcctaacacaacc 3157589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Complemental strand, 41790831 - 41790712
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||| | |||||||||  |||||||| | |||||| |||||||||| |||||| |||||||||||||  |||| |||||||||||||||| ||||||    
T  41790831 ttggttcatggacataaatggtgggtggctcgatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccatcttagaaatcg 41790732  T
Q  1157 taattgagcctaacacaacc 1176  Q
    |  ||| |||||||||||||    
T  41790731 tggttgggcctaacacaacc 41790712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 1057 - 1174
Target Start/End: Original strand, 37868494 - 37868611
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    |||||||||  ||||||||  ||||||||||||||||| |||| ||||| | |||| ||||||||||||| ||||| || ||||||||||||||||||||    
T  37868494 ttggttcgtgtacataaatggtgggtggcccaatagcggaaacttgatagcgggtggcccaatggatcttggagaggctatgataccatcttaaaaatcg 37868593  T
Q  1157 taattgagcctaacacaa 1174  Q
    |  ||  |||||||||||    
T  37868594 tggttaggcctaacacaa 37868611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Original strand, 39052840 - 39052959
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  |||||||||  |||||| |||||||||| |||| | || |||||||||| ||||| |||| ||||||||||| ||||||    
T  39052840 ttggttcgtggacataaatggtgggtggccggatagcggaaacctgatagcagggggccaaatggatcttggagaggctctaataccatcttagaaatcg 39052939  T
Q  1157 taattgagcctaacacaacc 1176  Q
    |  ||| |||||||||||||    
T  39052940 ttgttgggcctaacacaacc 39052959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1057 - 1157
Target Start/End: Original strand, 20094706 - 20094806
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    ||||||||| |||||||||  |||||||||  |||||||||||||||||  ||||| |||||||||||||  ||| |||||||||||| |||| ||||||    
T  20094706 ttggttcgtggacataaatggtgggtggcctgatagcgaaaacctgataggaggtggcccaatggatcttgaagaaactctgataccaacttataaatcg 20094805  T
Q  1157 t 1157  Q
    |    
T  20094806 t 20094806  T

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Target: chr8; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1111 - 1175
Target Start/End: Original strand, 27439512 - 27439576
Alignment:
Q  1111 tgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaac 1175  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||    
T  27439512 tgacccaacggatcttagagagactctgataccatcttaaaactcgtagttgagcctgacacaac 27439576  T

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Target: chr8; HSP #13
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Original strand, 5932095 - 5932214
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    |||||| || |||||||||  |||||||||| ||| || |||| |||||  |||||  |||||||||||| ||||| ||||||||||||||||||||| |    
T  5932095 ttggtttgtcgacataaatggtgggtggcccgataacggaaacgtgatagtaggtggtccaatggatcttggagaggctctgataccatcttaaaaatgg 5932194  T
Q  1157 taattgagcctaacacaacc 1176  Q
    |  ||| |||||||||||||    
T  5932195 tggttgggcctaacacaacc 5932214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 1047 - 1157
Target Start/End: Original strand, 5675957 - 5676067
Alignment:
Q  1047 agtattgagtttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatc 1146  Q
    ||||||| | ||||||||| |||||||||  |||||| ||||||| ||||||||||||| |||||| || | || |||||  ||||||||||||| ||||    
T  5675957 agtattgggcttggttcgtagacataaatggtgggtgacccaatatcgaaaacctgatagcaggtggcctagtgaatcttgaagagactctgatatcatc 5676056  T
Q  1147 ttaaaaatcgt 1157  Q
    ||| |||||||    
T  5676057 ttagaaatcgt 5676067  T

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Target: chr8; HSP #15
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 1052 - 1154
Target Start/End: Complemental strand, 7669597 - 7669495
Alignment:
Q  1052 tgagtttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaa 1151  Q
    |||| ||||||||| |||||||||  ||||||| || |||| | |||||||||| |||||| | |||||||||||  ||||||| |||||||||||||||    
T  7669597 tgagcttggttcgtggacataaatggtgggtggtccgatagtggaaacctgatagcaggtggctcaatggatcttgaagagactttgataccatcttaaa 7669498  T
Q  1152 aat 1154  Q
    |||    
T  7669497 aat 7669495  T

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Target: chr8; HSP #16
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Original strand, 24532353 - 24532451
Alignment:
Q  1078 tgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 1176  Q
    |||||||||| |||||| |||||||||| |||||| |||||||||||||  || | |||||||||||||||| ||||| |  ||| |||||||||||||    
T  24532353 tgggtggcccgatagcggaaacctgatagcaggtggcccaatggatcttgaaggggctctgataccatcttagaaatcatggttgggcctaacacaacc 24532451  T

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Target: chr8; HSP #17
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 1049 - 1151
Target Start/End: Original strand, 35682919 - 35683021
Alignment:
Q  1049 tattgagtttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatctt 1148  Q
    ||||||| ||||||||| |||||||||  |||||||||| |||||| |||||| ||| |||||| ||||||||||||| ||||  || ||||||||| ||    
T  35682919 tattgagcttggttcgtggacataaatggtgggtggcccgatagcggaaacctaatagcaggtggcccaatggatcttggagatgctatgataccatatt 35683018  T
Q  1149 aaa 1151  Q
    |||    
T  35683019 aaa 35683021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1060 - 1171
Target Start/End: Complemental strand, 12688242 - 12688131
Alignment:
Q  1060 gttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaa 1159  Q
    |||||| |||||||||  |||||||||||||||   |||||||||| |||||| |||||||||||||  |||| |||| ||| ||||||| |||||||      
T  12688242 gttcgtggacataaatggtgggtggcccaatagaagaaacctgatagcaggtggcccaatggatcttgaagaggctctaatatcatcttagaaatcgtgt 12688143  T
Q  1160 ttgagcctaaca 1171  Q
    ||||| ||||||    
T  12688142 ttgagtctaaca 12688131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 1068 - 1174
Target Start/End: Complemental strand, 12317208 - 12317102
Alignment:
Q  1068 acataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcct 1167  Q
    |||||||| |||||||| || ||| || ||||||||||||||||| ||||| | ||| |  |||| |||||||||||||||| |||||||  ||| ||||    
T  12317208 acataaatgatgggtggtccgataacggaaacctgataacaggtggcccaaagaatcgtgaagagtctctgataccatcttagaaatcgtggttgggcct 12317109  T
Q  1168 aacacaa 1174  Q
    |||||||    
T  12317108 aacacaa 12317102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 1057 - 1154
Target Start/End: Complemental strand, 10615567 - 10615470
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaat 1154  Q
    ||||||||| || ||||||| | |||| ||| |||||| |||||||||| ||||||   ||||||||||| ||||| |||||||||||||||| ||||    
T  10615567 ttggttcgtggagataaatagttggtgacccgatagcggaaacctgatatcaggtggtacaatggatcttggagaggctctgataccatcttagaaat 10615470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 952 - 1033
Target Start/End: Original strand, 14757707 - 14757788
Alignment:
Q  952 cctagttttaaatcatagtcaaggagttgttgtttgatccataaaatttgtgagcaacaactcctggctaccacatattcag 1033  Q
    ||||||||||||| | ||||||| ||||| ||||||||||||||||| || || |||||||| | |||||||||||| ||||    
T  14757707 cctagttttaaattaaagtcaagtagttgatgtttgatccataaaatctgagaacaacaactaccggctaccacatactcag 14757788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1057 - 1173
Target Start/End: Original strand, 31079486 - 31079602
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcg 1156  Q
    |||||||||| ||||||||  |||||||||| |||| | ||| ||||||||| |||  ||||||||||||  ||||  | ||||||||||||| |||||     
T  31079486 ttggttcgttcacataaatggtgggtggcccgatagtggaaatctgataacatgtggtccaatggatcttgtagaggttttgataccatcttagaaatct 31079585  T
Q  1157 taattgagcctaacaca 1173  Q
    | |||| ||||||||||    
T  31079586 ttattgggcctaacaca 31079602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1068 - 1176
Target Start/End: Complemental strand, 34842840 - 34842732
Alignment:
Q  1068 acataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcct 1167  Q
    |||| ||| ||||||||||| ||| || ||||||| ||||||| ||||||| | ||| |  |||| |||||||||||| ||| |||||||  ||||||||    
T  34842840 acattaatgatgggtggcccgataacggaaacctggtaacaggcgacccaaagaatcgtgaagaggctctgataccatattagaaatcgtggttgagcct 34842741  T
Q  1168 aacacaacc 1176  Q
    |||||||||    
T  34842740 aacacaacc 34842732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 693 - 835
Target Start/End: Original strand, 14757464 - 14757605
Alignment:
Q  693 ttgcttatttaaagcaagaggtatccaagatatctagtttcctacggatttttgagaaaagacttggatggtagtggttttgtaaaaatgtcagcaagct 792  Q
    |||||||||||||||||| |||||||| |||| ||||||  ||||||| |||| |||||||| | |||||| ||||||||  ||||||| |  ||||| |    
T  14757464 ttgcttatttaaagcaagtggtatccatgatacctagttcgctacgga-ttttaagaaaagagtcggatggaagtggtttgctaaaaatatttgcaagtt 14757562  T
Q  793 gattttttgtgtcaacgtactcgaatgttacatccttcttttc 835  Q
    ||  ||| |||||||  ||||| ||  ||||||| ||||||||    
T  14757563 gacatttggtgtcaatatactcaaaaattacatcattcttttc 14757605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1057 - 1176
Target Start/End: Original strand, 15042795 - 15042916
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagaga--ctctgataccatcttaaaaat 1154  Q
    ||||||||| ||||||||   |||||||||  |||||| |||||||||| |||||| ||||||| ||||| ||||||  || ||||| ||||||| ||||    
T  15042795 ttggttcgtggacataaacggtgggtggcctgatagcggaaacctgatagcaggtggcccaatgaatcttggagagaggctatgataacatcttagaaat 15042894  T
Q  1155 cgtaattgagcctaacacaacc 1176  Q
    |||  ||  |||||||||||||    
T  15042895 cgtggttaggcctaacacaacc 15042916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 1079 - 1176
Target Start/End: Original strand, 19256753 - 19256850
Alignment:
Q  1079 gggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 1176  Q
    ||||||||| ||| || ||||||||||||||||| ||||| | ||| |  |||| |||||||||||| ||| |||||||  ||| |||||||||||||    
T  19256753 gggtggcccgataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatattagaaatcgtggttgggcctaacacaacc 19256850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 1078 - 1154
Target Start/End: Original strand, 26208180 - 26208257
Alignment:
Q  1078 tgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagag-agactctgataccatcttaaaaat 1154  Q
    ||||||||||  ||| |||||||||||| |||||| ||||| ||||||||||| || |||||||||||||||| ||||    
T  26208180 tgggtggcccgttagggaaaacctgatagcaggtggcccaacggatcttagagaaggctctgataccatcttagaaat 26208257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1077 - 1175
Target Start/End: Complemental strand, 37001382 - 37001281
Alignment:
Q  1077 atgggtggcccaatagcgaaaacctgataacaggtgacccaatggatct---tagagagactctgataccatcttaaaaatcgtaattgagcctaacaca 1173  Q
    ||||||||||| |||||| |||||||| | |||||| ||||||||||||   |  |||| |||||||||||||||  |||||||  ||| ||||||||||    
T  37001382 atgggtggcccgatagcggaaacctgacagcaggtggcccaatggatcttgatgaagaggctctgataccatctttgaaatcgtggttgggcctaacaca 37001283  T
Q  1174 ac 1175  Q
    ||    
T  37001282 ac 37001281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1089 - 1187
Target Start/End: Original strand, 10614882 - 10614980
Alignment:
Q  1089 atagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaatcg 1187  Q
    ||||| ||||| ||||  ||||||  |||||||||||| ||||| || ||||| ||||||| |||||||  |||||||||| ||||||  |||||||||    
T  10614882 atagcaaaaacttgattgcaggtggtccaatggatcttggagaggctatgatatcatcttataaatcgtggttgagcctaatacaaccccacaaaatcg 10614980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1114 - 1176
Target Start/End: Original strand, 11232162 - 11232224
Alignment:
Q  1114 cccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 1176  Q
    ||||||||||||| ||||| |||||||||||||||| |||| ||  ||| |||||||||||||    
T  11232162 cccaatggatcttggagaggctctgataccatcttagaaatggtggttgggcctaacacaacc 11232224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1068 - 1118
Target Start/End: Complemental strand, 34843012 - 34842962
Alignment:
Q  1068 acataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaa 1118  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||| |||||    
T  34843012 acataaatgatgggtggcccgataacgaaaacctgataacaggtggcccaa 34842962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1068 - 1176
Target Start/End: Complemental strand, 4828230 - 4828122
Alignment:
Q  1068 acataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcct 1167  Q
    |||||||| | || |||||| ||| || ||||||||||||||||| ||||| | ||| |  |||| |||||||||||| ||| | |||||  ||| ||||    
T  4828230 acataaatgacggatggcccgataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatattagagatcgtggttgggcct 4828131  T
Q  1168 aacacaacc 1176  Q
    |||||||||    
T  4828130 aacacaacc 4828122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1080 - 1154
Target Start/End: Original strand, 9397808 - 9397882
Alignment:
Q  1080 ggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaat 1154  Q
    |||||||  |||| |||||||||||| ||| ||  |||| |||||||||||||||||||| | ||||||| ||||    
T  9397808 ggtggcctgatagtgaaaacctgatatcagatggtccaacggatcttagagagactctgaaatcatcttagaaat 9397882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1068 - 1118
Target Start/End: Original strand, 19472406 - 19472456
Alignment:
Q  1068 acataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaa 1118  Q
    |||||||| | ||||||||| |||||| ||||||||||||||||| |||||    
T  19472406 acataaatgacgggtggcccgatagcggaaacctgataacaggtggcccaa 19472456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1068 - 1118
Target Start/End: Original strand, 19543331 - 19543381
Alignment:
Q  1068 acataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaa 1118  Q
    |||||||| | ||||||||| |||||| ||||||||||||||||| |||||    
T  19543331 acataaatgacgggtggcccgatagcggaaacctgataacaggtggcccaa 19543381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1068 - 1118
Target Start/End: Complemental strand, 19589365 - 19589315
Alignment:
Q  1068 acataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaa 1118  Q
    |||||||| | ||||||||| |||||| ||||||||||||||||| |||||    
T  19589365 acataaatgacgggtggcccgatagcggaaacctgataacaggtggcccaa 19589315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1067 - 1145
Target Start/End: Original strand, 29907867 - 29907945
Alignment:
Q  1067 gacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccat 1145  Q
    |||||||||  ||||||| || ||| ||||||||||||| |||||| ||||| |  |||||||||| ||||||| ||||    
T  29907867 gacataaatggtgggtggaccgataacgaaaacctgatagcaggtggcccaacgagtcttagagagcctctgatgccat 29907945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1055 - 1187
Target Start/End: Complemental strand, 8716290 - 8716157
Alignment:
Q  1055 gtttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagag-agactctgataccatcttaaaaa 1153  Q
    |||| |||||| |||||||||  | |||| ||| |||||| |||||| ||| || ||||| ||||||||||||  | || |||||||||||| ||| |||    
T  8716290 gttttgttcgtggacataaatggtcggtgacccgatagcggaaacctaatagcatgtgactcaatggatcttaacgaaggctctgataccatattagaaa 8716191  T
Q  1154 tcgtaattgagcctaacacaaccatacaaaatcg 1187  Q
    || |  ||| | |||||||||||  |||||||||    
T  8716190 tcttggttgggtctaacacaaccccacaaaatcg 8716157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 53; Significance: 9e-21; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 53; E-Value: 9e-21
Query Start/End: Original strand, 1049 - 1193
Target Start/End: Complemental strand, 12828 - 12684
Alignment:
Q  1049 tattgagtttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatctt 1148  Q
    ||||||| |||||||||  ||||||||  ||||||  || ||||||||| |||||||  ||||| ||||||  ||||| ||||||| || ||||||||||    
T  12828 tattgagcttggttcgtgaacataaatggtgggtgttccgatagcgaaatcctgatagtaggtggcccaatttatcttggagagacgctaataccatctt 12729  T
Q  1149 aaaaatcgtaattgagcctaacacaaccatacaaaatcgaattgt 1193  Q
    |||||| ||  ||| |||||||||||||| |||||||||| ||||    
T  12728 aaaaattgtggttgggcctaacacaaccacacaaaatcgacttgt 12684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 52; Significance: 3e-20; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 1061 - 1176
Target Start/End: Complemental strand, 14472 - 14357
Alignment:
Q  1061 ttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaat 1160  Q
    ||||| |||||||||  | |||||||| |||||| |||||||||||||  || ||||||||||||| ||||| |||||||||||||||| ||| |||  |    
T  14472 ttcgtggacataaatggtaggtggcccgatagcggaaacctgataacatatggcccaatggatcttggagaggctctgataccatcttagaaaacgtggt 14373  T
Q  1161 tgagcctaacacaacc 1176  Q
    || |||||||||||||    
T  14372 tgggcctaacacaacc 14357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 48; Significance: 8e-18; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 1096 - 1195
Target Start/End: Complemental strand, 81976 - 81877
Alignment:
Q  1096 aaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaatcgaattgtaa 1195  Q
    ||||||||||||||||   |||||||||||| ||||| |||||||||||||||| |||||||  ||| |||||||||||||  |||||| ||| ||||||    
T  81976 aaacctgataacaggtagtccaatggatcttggagaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccgacttgtaa 81877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1067 - 1176
Target Start/End: Complemental strand, 4008 - 3899
Alignment:
Q  1067 gacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcc 1166  Q
    |||| |||| ||||||||||| |||||| |||||||||| |||||| |||| |||||||| |||||  ||||||||||| ||| |||| ||  ||| |||    
T  4008 gacacaaatgatgggtggcccgatagcggaaacctgatagcaggtggcccagtggatcttggagaggatctgataccatattagaaattgtggttgtgcc 3909  T
Q  1167 taacacaacc 1176  Q
    ||||||||||    
T  3908 taacacaacc 3899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1067 - 1176
Target Start/End: Complemental strand, 4652 - 4543
Alignment:
Q  1067 gacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcc 1166  Q
    |||| |||| ||||||||||| |||||| |||||||||| |||||| |||| |||||||| |||||  ||||||||||| ||| |||| ||  ||| |||    
T  4652 gacacaaatgatgggtggcccgatagcggaaacctgatagcaggtggcccagtggatcttggagaggatctgataccatattagaaattgtggttgtgcc 4553  T
Q  1167 taacacaacc 1176  Q
    ||||||||||    
T  4552 taacacaacc 4543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1068 - 1176
Target Start/End: Complemental strand, 56621 - 56513
Alignment:
Q  1068 acataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcct 1167  Q
    |||||||| | ||||||||| ||| |||||||||||||||||||| ||||| | ||  |  |||| |||||||||||| ||| |||||||  ||| ||||    
T  56621 acataaatgacgggtggcccgataacgaaaacctgataacaggtggcccaaagaattgtgaagaggctctgataccatattagaaatcgtggttgggcct 56522  T
Q  1168 aacacaacc 1176  Q
    |||||||||    
T  56521 aacacaacc 56513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 40; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1057 - 1148
Target Start/End: Complemental strand, 51446 - 51355
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatcttagagagactctgataccatctt 1148  Q
    |||||||||  |||||||| || |||||||| ||||   |||||||||| |||| ||||||||||||||| ||||  |||||||||||||||    
T  51446 ttggttcgtgaacataaatgataggtggcccgatagtagaaacctgatagcaggagacccaatggatcttggagaagctctgataccatctt 51355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1057 - 1145
Target Start/End: Complemental strand, 13271 - 13181
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatag-cgaaaacctgataacaggtgacccaatggatcttagagagactc-tgataccat 1145  Q
    ||||||| | |||||||||| |||||| |||||||| || |||||||||| ||||||  |||||||||||| ||||||||| |||||||||    
T  13271 ttggttcatggacataaatagtgggtgacccaataggcggaaacctgatagcaggtggtccaatggatcttggagagactcttgataccat 13181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 39; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1057 - 1145
Target Start/End: Complemental strand, 10912 - 10822
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatag-cgaaaacctgataacaggtgacccaatggatcttagagagactc-tgataccat 1145  Q
    ||||||| | |||||||||| |||||| |||||||| || |||||||||| ||||||  |||||||||||| ||||||||| |||||||||    
T  10912 ttggttcatggacataaatagtgggtgacccaataggcggaaacctgatagcaggtggtccaatggatcttggagagactcttgataccat 10822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1057 - 1145
Target Start/End: Complemental strand, 14578 - 14488
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatag-cgaaaacctgataacaggtgacccaatggatcttagagagactc-tgataccat 1145  Q
    ||||||| | |||||||||| |||||| ||| |||| || |||||||||| ||||||  |||||||||||| ||||||||| |||||||||    
T  14578 ttggttcatggacataaatagtgggtgacccgataggcggaaacctgatagcaggtggtccaatggatcttggagagactcttgataccat 14488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0542 (Bit Score: 38; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 1057 - 1126
Target Start/End: Complemental strand, 5802 - 5733
Alignment:
Q  1057 ttggttcgttgacataaataatgggtggcccaatagcgaaaacctgataacaggtgacccaatggatctt 1126  Q
    ||||||||| ||||||||| || |||||| | |||||||||| |||||| ||||||||||||| ||||||    
T  5802 ttggttcgtggacataaatgataggtggctcgatagcgaaaatctgatagcaggtgacccaatagatctt 5733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1096 - 1176
Target Start/End: Complemental strand, 5789 - 5709
Alignment:
Q  1096 aaacctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 1176  Q
    |||||||||| |||||| |||||||||| ||  |||| |||||||||||||||| |||||||  ||| | |||||||||||    
T  5789 aaacctgatagcaggtggcccaatggattttgaagaggctctgataccatcttagaaatcgtggttgggtctaacacaacc 5709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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