View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7318_high_13 (Length: 336)
Name: NF7318_high_13
Description: NF7318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7318_high_13 |
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Alignment Details
Target: chr4 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 18 - 326
Target Start/End: Complemental strand, 23323099 - 23322791
Alignment:
| Q |
18 |
ttattttcatataagatttagtgtgaatcaagaatcggcttaatgtttattgaaatgttttctgatgctgcagaatttgctttttgtattataattattg |
117 |
Q |
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| T |
23323099 |
ttattttcatataagattttgtgtgaatcaagaatcggcttcatgtttattgaaatgttttctgatgctgcagaatttgttttttgtattataattattg |
23323000 |
T |
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| Q |
118 |
tagtgtgggttttcttctttatatctatctcccatggcgcatttatgcgtctgnnnnnnnnaatttaccatgcaatcgccacaagaaaccatgtgcaaag |
217 |
Q |
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| T |
23322999 |
tagtgtgggttttcttctttatatctatctcccatggcgcatttatgcgtctgttttttttaatttaccatgcaatcgccacaagaaaccatgttcaaag |
23322900 |
T |
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| Q |
218 |
gcaaattccagatgtgtcaaattttcaaagacgacttccagaactggcgaatttctatcctagcaattcttctcgacatgttctaaacagtggattggag |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
23322899 |
gcaaattccagatgtgtcaaattttcaaagacgacttccagaactggcgaatttttatcctagtaattcttctcgacatgttctaaacagtggattggag |
23322800 |
T |
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| Q |
318 |
tactctatg |
326 |
Q |
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||||||||| |
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| T |
23322799 |
tactctatg |
23322791 |
T |
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