View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7319_high_16 (Length: 354)
Name: NF7319_high_16
Description: NF7319
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7319_high_16 |
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Alignment Details
Target: chr2 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 24 - 343
Target Start/End: Complemental strand, 17802245 - 17801926
Alignment:
| Q |
24 |
gtcccttttgacgacatttgtatgtgccgagtaaggggtgatgggctgagtatgcgaacttggggcaacatctactttagcaatgaccttatttaggaat |
123 |
Q |
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| T |
17802245 |
gtcccttttagcgatatttgcatgtgtcgagtaaggggtgatgggctgagtatgcgaacttggggcaacatctacttcagcaatgaccttatttaggatt |
17802146 |
T |
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| Q |
124 |
agaaatttagtctaagatgtaaatgatgacttatgacgatccacaactcccaagcatgatgcctgcaagtgcggagtgttcaaaataataagccgagata |
223 |
Q |
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| T |
17802145 |
agaaatttagtctgagacgtacgtgatgatttatgacgatccacaactcccaagcatgatgcctgcaagagcgaagtgttcaaaataataagccgggata |
17802046 |
T |
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| Q |
224 |
acaaatagcatatgacagtccacatcctccaaacatgaggtgcgtgagagtgaaatacttaaaatcataagccaaagtaacaactaacaaatgttctgca |
323 |
Q |
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| T |
17802045 |
acaaatagcctatgacagtccacatcctccaaacacgaggtccgttagagtcaaatacttaaaatcataagccgaagtaacaactaacaaatgttctgca |
17801946 |
T |
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| Q |
324 |
acatttcacaaccccgaaca |
343 |
Q |
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| T |
17801945 |
acatttcacaaccccaaaca |
17801926 |
T |
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