View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7319_low_27 (Length: 308)
Name: NF7319_low_27
Description: NF7319
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7319_low_27 |
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Alignment Details
Target: chr8 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 22 - 295
Target Start/End: Original strand, 32055564 - 32055837
Alignment:
| Q |
22 |
acaggacacgcaccaaaatgaccatgatcagtgacaacacatcgcccttcactatcaacattgagaagctcatcttttgaaaaatcctcaagatcttctt |
121 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32055564 |
acaggacacgcaccaaaatgaccatgatcagtgacaacacatcgcccttcactatcaacattgagaagctcatcttttgaaaaatcctcaagatcttctt |
32055663 |
T |
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| Q |
122 |
ccataaagaatggcaaattgccttcactagtttgagagctacacaataggccagtgaatccttcctcagctgccaaaggcaatgctgcttcgttactgga |
221 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32055664 |
ccataaagaatggcaacttgccttcactagtttgagagctacacaataggccagtgaatccttcctcagctgccaaaggcaatgctgcttcgttactgga |
32055763 |
T |
|
| Q |
222 |
aaaagcagaccttacacgacaaaatgtaataacacctgcacactcaaatcaaatttattgcttgaagtttagta |
295 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32055764 |
aaaagcagaccttacacgacaaaatgtaataacacctgcacactcaaatcaaatttattgcttgaagtttagta |
32055837 |
T |
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