View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7319_low_33 (Length: 245)
Name: NF7319_low_33
Description: NF7319
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7319_low_33 |
 | |
|
| [»] scaffold0001 (2 HSPs) |
| | |
|
| [»] scaffold0656 (1 HSPs) |
| | |
|
| [»] scaffold0046 (1 HSPs) |
| | |
|
| [»] scaffold0107 (1 HSPs) |
| | |
|
| [»] scaffold0053 (1 HSPs) |
| | |
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| [»] scaffold0026 (1 HSPs) |
| | |
|
| [»] scaffold0241 (1 HSPs) |
| | |
|
| [»] scaffold0304 (1 HSPs) |
| | |
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| [»] scaffold0040 (1 HSPs) |
| | |
|
| [»] scaffold0022 (1 HSPs) |
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| [»] scaffold0051 (1 HSPs) |
| | |
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| [»] scaffold0064 (1 HSPs) |
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| [»] scaffold0023 (4 HSPs) |
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| [»] scaffold0013 (1 HSPs) |
| | |
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| [»] scaffold0100 (1 HSPs) |
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| [»] scaffold0757 (1 HSPs) |
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Alignment Details
Target: scaffold0001 (Bit Score: 232; Significance: 1e-128; HSPs: 2)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 93402 - 93163
Alignment:
| Q |
1 |
cagatatgacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
93402 |
cagatatgacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgtt |
93303 |
T |
|
| Q |
101 |
ttgccacttagatttgatatgaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattgccttggttttg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
93302 |
ttgccacttagatttgatatgaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattgccttggttttg |
93203 |
T |
|
| Q |
201 |
ttctggttgatttcgattccctttttatgcaacacgaaac |
240 |
Q |
| |
|
||||| ||||||||||||||||||||||||| |||||||| |
|
|
| T |
93202 |
ttctgtttgatttcgattccctttttatgcaccacgaaac |
93163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 124624 - 124874
Alignment:
| Q |
1 |
cagatatgacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgtt |
100 |
Q |
| |
|
|||||||||||||||||||||||| || ||||||||||| | |||||||| |||||||| |||||||| | ||| |||| ||| |||||||||||||| |
|
|
| T |
124624 |
cagatatgacttgatttcatcgaaagctttttggtgctcaggttcccatttgaaaatatcgtctttcttcagtcgaagtaatggtgagaaagcttgtgtc |
124723 |
T |
|
| Q |
101 |
ttgccacttagatttgatatgaa-----------agttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattg |
189 |
Q |
| |
|
|| ||||| |||||||||||||| ||||||||||||| | ||||| ||||||||||||||| |||||||||||| ||||||||||||| |
|
|
| T |
124724 |
ttcccactcagatttgatatgaacctccggagaaagttgatttttcccagtaatgactgcaactctttcttcatagaaggagctttggtctcaattattg |
124823 |
T |
|
| Q |
190 |
ccttggttttgttctggttgatttcgattccctttttatgcaacacgaaac |
240 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||| |||| ||||||| |
|
|
| T |
124824 |
ccttggttttgttctggttgatttcgattccttttttgtgcactacgaaac |
124874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 150; Significance: 2e-79; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 4 - 240
Target Start/End: Complemental strand, 21296299 - 21296052
Alignment:
| Q |
4 |
atatgacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgttttg |
103 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||| ||| |
|
|
| T |
21296299 |
atatgactagatttcatcgaaggccttttggtgctctggctcccatttaaaaatatcttctttcttcaatcggagtaatggcgagaatgcttgtgtcttg |
21296200 |
T |
|
| Q |
104 |
ccacttagatttgatat-----------gaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattgcct |
192 |
Q |
| |
|
||||||||||| ||||| ||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21296199 |
ccacttagattcgatataaacctcctgagaaagtttatttttcctaataatgactgcaactctttcttcgtagaaggagcttgagtctcaattattgcct |
21296100 |
T |
|
| Q |
193 |
tggttttgttctggttgatttcgattccctttttatgcaacacgaaac |
240 |
Q |
| |
|
||||||| |||||||||||||||||||| |||||||| | |||||||| |
|
|
| T |
21296099 |
tggttttattctggttgatttcgattccttttttatgaaccacgaaac |
21296052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 22802632 - 22802882
Alignment:
| Q |
1 |
cagatatgacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgtt |
100 |
Q |
| |
|
|||||||||||||||||||||||| || ||||||||||| | ||||||||| |||| ||| |||||||||| |||||||| ||| |||||||||||||| |
|
|
| T |
22802632 |
cagatatgacttgatttcatcgaaagctttttggtgctctggctcccatttgaaaacatcatctttctttagtcggagtaatggtgagaaagcttgtgtc |
22802731 |
T |
|
| Q |
101 |
ttgccacttagatttgatat-----------gaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattg |
189 |
Q |
| |
|
|| ||||||| ||||||||| |||||||||||||||| || ||||| |||||||||||||| ||||||||||||| ||||| ||||||| |
|
|
| T |
22802732 |
ttaccacttaaatttgatataaacctccggagaaagttgatttttcccaataatgactgcaactctttctttgtagaaggagctttggtctcgattattg |
22802831 |
T |
|
| Q |
190 |
ccttggttttgttctggttgatttcgattccctttttatgcaacacgaaac |
240 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||||||||||| |||||||| |
|
|
| T |
22802832 |
ccttggttttgttctagttgattttgattccctttttatgcaccacgaaac |
22802882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 4 - 240
Target Start/End: Original strand, 22692077 - 22692313
Alignment:
| Q |
4 |
atatgacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgttttg |
103 |
Q |
| |
|
||||||||||| |||||| |||||||||||||| || | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |
|
|
| T |
22692077 |
atatgacttgacttcatcaaaggccttttggtgttctggctcccatttaaaaatatcttctttctttaatcggagtaatggcgagaaagcttgtgttctg |
22692176 |
T |
|
| Q |
104 |
cc---acttagatttgatatgaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattgccttggttttg |
200 |
Q |
| |
|
|| ||| |||| | ||||| ||| || ||||| || || |||||||||||||||||||||||||| ||||||| ||||| || ||||||||| |
|
|
| T |
22692177 |
ccattactccgatt---aaagaaagaagatattccctaataacgactgcaactctttcttcgtagaaggagcctgagtcttgattatggctttggttttg |
22692273 |
T |
|
| Q |
201 |
ttctggttgatttcgattccctttttatgcaacacgaaac |
240 |
Q |
| |
|
|||| ||||||||||||||| |||||||| | |||||||| |
|
|
| T |
22692274 |
ttctagttgatttcgattccttttttatgaaccacgaaac |
22692313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 8 - 231
Target Start/End: Original strand, 41378246 - 41378480
Alignment:
| Q |
8 |
gacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgttttgccac |
107 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| | |||||||| |||| ||| |||||||| ||||| |||||||| |||||||||||||| |||||| |
|
|
| T |
41378246 |
gacttgatttcgtcgaaggctttttggtgctcaggttcccatttgaaaacatcatctttcttcaatcgaagtagtggtgagaaagcttgtgtcctgccac |
41378345 |
T |
|
| Q |
108 |
ttagatttgatat-----------gaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattgccttggt |
196 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| | || || || |||||||| ||||| ||||||| |||||| |||||||| ||||| |
|
|
| T |
41378346 |
ttagatttgatataaatcttcggagaaagttgatttttcctaatagagactgtaattctttctttgtagagggagctttagtctcgattattgctttggt |
41378445 |
T |
|
| Q |
197 |
tttgttctggttgatttcgattccctttttatgca |
231 |
Q |
| |
|
||||||||||||||| | |||||| ||||| |||| |
|
|
| T |
41378446 |
tttgttctggttgatcttgattccttttttgtgca |
41378480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0656 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold0656
Description:
Target: scaffold0656; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 7393 - 7143
Alignment:
| Q |
1 |
cagatatgacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| |||| ||||||||| |||| ||| |||||||||| | |||||| |||||||||||||||||| |
|
|
| T |
7393 |
cagatatgacttgatttcatcgaaggctttttggtgttccggctcccatttgaaaacatcctctttctttagttggagtaatggcgagaaagcttgtgtc |
7294 |
T |
|
| Q |
101 |
ttgccacttagatttgatat-----------gaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattg |
189 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||||||||||||| ||||| ||||||| |
|
|
| T |
7293 |
ttgccacttagatttgatataaacctcctgagaaagttgatttttcctaatagtgactgcaactctttcttcgtagaaggagctttggtctcgattattg |
7194 |
T |
|
| Q |
190 |
ccttggttttgttctggttgatttcgattccctttttatgcaacacgaaac |
240 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
7193 |
ccttggttttgttctggttgatttcgattccctttttatgcaccacgaaac |
7143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 144; Significance: 8e-76; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 4 - 226
Target Start/End: Complemental strand, 22070101 - 22069868
Alignment:
| Q |
4 |
atatgacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgttttg |
103 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| | ||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||| ||| |
|
|
| T |
22070101 |
atatgacttgatttcatcaaaggccttttggtgctctggctcccatttaaaagtatcttctttcttcaatcggagtactggcgagaaagcttgtgtcttg |
22070002 |
T |
|
| Q |
104 |
ccacttagatttgatat-----------gaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattgcct |
192 |
Q |
| |
|
||||||||||| ||||| ||||||||||||||||||| || || || ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22070001 |
ccacttagattcgatataaatctcctaagaaagttgatttttcctaataacgactgtaactctttcttcgtagaaggagcttgagtctcaattattgcct |
22069902 |
T |
|
| Q |
193 |
tggttttgttctggttgatttcgattcccttttt |
226 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| |
|
|
| T |
22069901 |
tggttttgttctggttgatttcgattcctttttt |
22069868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 22341423 - 22341673
Alignment:
| Q |
1 |
cagatatgacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgtt |
100 |
Q |
| |
|
||||||||||||||||||||| || || ||||||||||| | ||||| || |||| ||| |||||||||| |||||||| ||| |||||||||||||| |
|
|
| T |
22341423 |
cagatatgacttgatttcatcaaaagctttttggtgctctggttcccacttgaaaacatcatctttctttagtcggagtaatggtgagaaagcttgtgtc |
22341522 |
T |
|
| Q |
101 |
ttgccacttagatttgatat-----------gaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattg |
189 |
Q |
| |
|
|| ||||| ||||||||||| |||||||||||||| | | ||||| || ||||||||||||||||||||||||| |||| |||||||| |
|
|
| T |
22341523 |
ttaccactcagatttgatataaacctccggagaaagttgattttttccagtaatgactgtaactctttcttcgtagaaggagctttggtcttaattattg |
22341622 |
T |
|
| Q |
190 |
ccttggttttgttctggttgatttcgattccctttttatgcaacacgaaac |
240 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
22341623 |
ccttggttttgttctggttgatttcgattccctttttatgcactacgaaac |
22341673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 22346606 - 22346856
Alignment:
| Q |
1 |
cagatatgacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgtt |
100 |
Q |
| |
|
||||||||||||||||||||| || || ||||||||||| | ||||| || |||| ||| |||||||||| |||||||| ||| |||||||||||||| |
|
|
| T |
22346606 |
cagatatgacttgatttcatcaaaagctttttggtgctctggttcccacttgaaaacatcatctttctttagtcggagtaatggtgagaaagcttgtgtc |
22346705 |
T |
|
| Q |
101 |
ttgccacttagatttgatat-----------gaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattg |
189 |
Q |
| |
|
|| ||||| ||||||||||| |||||||||||||| | | ||||| || ||||||||||||||||||||||||| |||| |||||||| |
|
|
| T |
22346706 |
ttaccactcagatttgatataaacctccggagaaagttgattttttccagtaatgactgtaactctttcttcgtagaaggagctttggtcttaattattg |
22346805 |
T |
|
| Q |
190 |
ccttggttttgttctggttgatttcgattccctttttatgcaacacgaaac |
240 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
22346806 |
ccttggttttgttctggttgatttcgattccctttttatgcactacgaaac |
22346856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0046 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: scaffold0046
Description:
Target: scaffold0046; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 4 - 240
Target Start/End: Complemental strand, 56297 - 56058
Alignment:
| Q |
4 |
atatgacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgttttg |
103 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||| | || |||||||||||||||||||| |||| |||||||||||||||||| || |
|
|
| T |
56297 |
atataacttgatttcatcgaaggccttttggtgctccggcc--------aatatatcttctttctttaatcgtagtaatggcgagaaagcttgtgtcatg |
56206 |
T |
|
| Q |
104 |
ccacttagatttgatat-----------gaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattgcct |
192 |
Q |
| |
|
||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
56205 |
ccacttagattcgatataaacctcctgagaaagttgatttttcctaacaatgactgcaactctttcttcgtagaaggagcttgagtgtcaattattgcct |
56106 |
T |
|
| Q |
193 |
tggttttgttctggttgatttcgattccctttttatgcaacacgaaac |
240 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||| |||||||| |
|
|
| T |
56105 |
tggttttgttctggttgatttcgattccttttttatgcaccacgaaac |
56058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0107 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: scaffold0107
Description:
Target: scaffold0107; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 6487 - 6248
Alignment:
| Q |
1 |
cagatatgacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgtt |
100 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||||||| ||| ||||||||| |||| ||| ||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
6487 |
cagatatgacttgatttcctcgaatgccttttggtgttcctgctcccatttgaaaacatcctctttctttaatcggagtaatggcgagaaagcttgtgtc |
6388 |
T |
|
| Q |
101 |
ttgccacttagatttgatat-----------gaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattg |
189 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||||||||||||| |||| |||||| |
|
|
| T |
6387 |
ttgccacttagatttgatataaacctcctgagaaagttgatttttcctaatagtgactgcaactctttcttcgtagaaggagctttggtcttggttattg |
6288 |
T |
|
| Q |
190 |
ccttggttttgttctggttgatttcgattccctttttatg |
229 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
6287 |
ccttggttttgttctggttgatctcgattccctttttatg |
6248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0053 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: scaffold0053
Description:
Target: scaffold0053; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 16 - 240
Target Start/End: Original strand, 40123 - 40358
Alignment:
| Q |
16 |
ttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgttttgccacttagattt |
115 |
Q |
| |
|
|||||| |||||||||||||| || | |||||||||||||| |||||||||||| || |||| || |||||||||||||||||| |||||||||||||| |
|
|
| T |
40123 |
ttcatcaaaggccttttggtgttctggctcccatttaaaaacatcttctttcttcaagcggactaatggcgagaaagcttgtgtcttgccacttagattc |
40222 |
T |
|
| Q |
116 |
gatatgaa-----------agttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattgccttggttttgttct |
204 |
Q |
| |
|
|||||||| ||||||||||||||| || || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40223 |
gatatgaatctcctaagaaagttgatttttcctagtaacgactgcaactctttctttgtagaaggagcttgagtctcaattattgccttggttttgttct |
40322 |
T |
|
| Q |
205 |
ggttgatttcgattccctttttatgcaacacgaaac |
240 |
Q |
| |
|
||||||||||||||||||||||||| | |||||||| |
|
|
| T |
40323 |
ggttgatttcgattccctttttatggaccacgaaac |
40358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 125; Significance: 2e-64; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 14744818 - 14745068
Alignment:
| Q |
1 |
cagatatgacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgtt |
100 |
Q |
| |
|
||||||||| |||||||||||||| || ||||||||||| | ||||||||| |||| ||| |||||||||| |||||||| ||| |||||||||||||| |
|
|
| T |
14744818 |
cagatatgatttgatttcatcgaaagctttttggtgctctggctcccatttgaaaacatcatctttctttagtcggagtaatggtgagaaagcttgtgtc |
14744917 |
T |
|
| Q |
101 |
ttgccacttagatttgatat-----------gaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattg |
189 |
Q |
| |
|
|| ||||||| ||||||||| |||||||||||||||| || ||||| |||||||||||||| ||||||||||||| ||||| ||||||| |
|
|
| T |
14744918 |
ttaccacttaaatttgatataaacctctagagaaagttgatttttcccaataatgactgcaactctttctttgtagaaggagctttggtctcgattattg |
14745017 |
T |
|
| Q |
190 |
ccttggttttgttctggttgatttcgattccctttttatgcaacacgaaac |
240 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
14745018 |
ccttggttttgttctggttgatttcgattccctttttatgcaccacgaaac |
14745068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 4 - 231
Target Start/End: Original strand, 13287220 - 13287458
Alignment:
| Q |
4 |
atatgacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgttttg |
103 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||| | |||||||| |||| ||| |||||||||| |||||||||||| |||||||||||| | ||| |
|
|
| T |
13287220 |
atatgacttgatttcatcgaaagctttttggtgctctggttcccatttgaaaacatcatctttctttagtcggagtagtggtgagaaagcttgtttcttg |
13287319 |
T |
|
| Q |
104 |
ccacttagatttgatat-----------gaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggag-cttgagtctcaattattgcc |
191 |
Q |
| |
|
|||||||| |||||||| |||||||||| ||||||| | || |||||||||||||| |||||||||| ||||| |||| ||||||||| |
|
|
| T |
13287320 |
ccacttaggtttgatataaacctccggagaaagttgatctttcctagtagagactgcaactctttctttgtagaaggagtcttga-tctcgattattgcc |
13287418 |
T |
|
| Q |
192 |
ttggttttgttctggttgatttcgattccctttttatgca |
231 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
13287419 |
ttggttttgttctggttgatctcgatcccctttttatgca |
13287458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 4 - 240
Target Start/End: Original strand, 15151750 - 15151997
Alignment:
| Q |
4 |
atatgacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgttttg |
103 |
Q |
| |
|
||||||||||||||||||||| | ||||||||||| | |||||||| |||| ||| |||||||||| |||||||||||| |||||||||||||| ||| |
|
|
| T |
15151750 |
atatgacttgatttcatcgaaaactttttggtgctctggttcccatttgaaaacatcatctttctttagtcggagtagtggtgagaaagcttgtgtcttg |
15151849 |
T |
|
| Q |
104 |
ccacttagatttgatat-----------gaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattgcct |
192 |
Q |
| |
|
|||||||| |||||||| ||||||||| ||||||| | || ||||||||||||||||| |||||||||| ||||| |||||||||| |
|
|
| T |
15151850 |
ccacttaggtttgatataaacctccggagaaagttgacctttcctagtagagactgcaactctttcttcgtggaaggagctttggtctcgattattgcct |
15151949 |
T |
|
| Q |
193 |
tggttttgttctggttgatttcgattccctttttatgcaacacgaaac |
240 |
Q |
| |
|
|||||||||| ||||| || ||||||||||||||||||| ||||||| |
|
|
| T |
15151950 |
tggttttgttttggttaatctcgattccctttttatgcacgacgaaac |
15151997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 202
Target Start/End: Original strand, 18560406 - 18560614
Alignment:
| Q |
4 |
atatgacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgttttg |
103 |
Q |
| |
|
|||||| |||||||| || || ||||||||||| || | |||||||| || | |||||||| ||||| || |||| ||||||||||| || ||||||| |
|
|
| T |
18560406 |
atatgatttgatttcttcaaaagccttttggtgttctggttcccatttgaacacatcttctt-ctttagacgaagtaatggcgagaaagtttttgttttg |
18560504 |
T |
|
| Q |
104 |
ccacttagatttgatatgaa-----------agttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattgcct |
192 |
Q |
| |
|
|| ||||| || |||||||| ||||||||||||||| ||| || |||||||||||||| || ||||| ||||||||||| |||||||| | |
|
|
| T |
18560505 |
ccgcttaggttcgatatgaaccttttgagaaagttgatttttcctagcaaagactgcaactctttctttgtcgaaggggcttgagtctccattattgctt |
18560604 |
T |
|
| Q |
193 |
tggttttgtt |
202 |
Q |
| |
|
|||||||||| |
|
|
| T |
18560605 |
tggttttgtt |
18560614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 125; Significance: 2e-64; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 24916035 - 24915785
Alignment:
| Q |
1 |
cagatatgacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgtt |
100 |
Q |
| |
|
|||||||||||||||||||||||| || |||||||| | || ||||||||| |||| ||| |||||||||| ||| |||| ||||||||||| |||||| |
|
|
| T |
24916035 |
cagatatgacttgatttcatcgaaagctttttggtgtttcgactcccatttgaaaacatcatctttctttagtcgaagtaatggcgagaaagtttgtgtc |
24915936 |
T |
|
| Q |
101 |
ttgccacttagatttgatat-----------gaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattg |
189 |
Q |
| |
|
||| |||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||||||||||||| ||||| ||||||| |
|
|
| T |
24915935 |
ttgacacttagatttgatataaacctcctgagaaagttgatttttcctaatagtgactgcaactctttcttcgtagaaggagctttggtctcgattattg |
24915836 |
T |
|
| Q |
190 |
ccttggttttgttctggttgatttcgattccctttttatgcaacacgaaac |
240 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
24915835 |
ccttggttttgttctggttgatttcgattccctttttatgcactacgaaac |
24915785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 4 - 231
Target Start/End: Complemental strand, 22640655 - 22640417
Alignment:
| Q |
4 |
atatgacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgttttg |
103 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||| | |||||||| |||| ||| |||||||||| |||||||||||| |||||||||||||| ||| |
|
|
| T |
22640655 |
atatgacttgatttcatcgaaagctttttggtgctctggttcccatttgaaaacatcatctttctttagtcggagtagtggtgagaaagcttgtgtcttg |
22640556 |
T |
|
| Q |
104 |
ccacttagatttgatat-----------gaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattgcct |
192 |
Q |
| |
|
|||||||| |||||||| |||||||||| ||||||| | || || ||||||||||| ||||||||||| | ||||||||| |||||| |
|
|
| T |
22640555 |
ccacttaggtttgatataaaccttcggagaaagttgatctttcctagtagagactgtaactctttctttgtagaaggagccttggtctcaatttttgcct |
22640456 |
T |
|
| Q |
193 |
tggttttgttctggttgatttcgattccctttttatgca |
231 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
22640455 |
tggttttgttctggttgatctcgattccctttttatgca |
22640417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 4 - 231
Target Start/End: Original strand, 23198697 - 23198935
Alignment:
| Q |
4 |
atatgacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgttttg |
103 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||| | |||||||| |||| ||| |||||||||| |||||||||||| |||||||||||||| ||| |
|
|
| T |
23198697 |
atatgacttgatttcatcgaaagctttttggtgctctggttcccatttgaaaacatcatctttctttagtcggagtagtggtgagaaagcttgtgtcttg |
23198796 |
T |
|
| Q |
104 |
ccacttagatttgatat-----------gaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattgcct |
192 |
Q |
| |
|
| |||||| |||||||| |||||||||| ||||||| | || || ||||||||||| ||||||||||| | |||||||||||||||| |
|
|
| T |
23198797 |
ctacttaggtttgatataaaccttcggagaaagttgatctttcctagtagagactgtaactctttctttgtagaaggagccttggtctcaattattgcct |
23198896 |
T |
|
| Q |
193 |
tggttttgttctggttgatttcgattccctttttatgca |
231 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
23198897 |
tggttttgttctggttgatctcgattccctttttatgca |
23198935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 4 - 231
Target Start/End: Original strand, 23624102 - 23624340
Alignment:
| Q |
4 |
atatgacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgttttg |
103 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||| | |||||||| |||| ||| |||||||||| |||||||||||| |||||||||||||| ||| |
|
|
| T |
23624102 |
atatgacttgatttcatcgaaagctttttggtgctctggttcccatttgaaaacatcatctttctttagtcggagtagtggtgagaaagcttgtgtcttg |
23624201 |
T |
|
| Q |
104 |
ccacttagatttgatat-----------gaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattgcct |
192 |
Q |
| |
|
|||||||| |||||||| |||||||||| ||||||| | || || ||||||||||| ||||||||||| | |||||||||||||||| |
|
|
| T |
23624202 |
ccacttaggtttgatataaaccttcggagaaagttgatctttcctagtagagactgtaactctttctttgtagaaggagccttggtctcaattattgcct |
23624301 |
T |
|
| Q |
193 |
tggttttgttctggttgatttcgattccctttttatgca |
231 |
Q |
| |
|
||||||||||||| ||||| ||||||||||||||||||| |
|
|
| T |
23624302 |
tggttttgttctgcttgatctcgattccctttttatgca |
23624340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 202
Target Start/End: Original strand, 23811843 - 23812054
Alignment:
| Q |
4 |
atatgacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgttttg |
103 |
Q |
| |
|
|||||| |||||||| || || ||||||||||| || | ||| ||| || | |||||||||||| | || |||| |||||| ||||||||||||||| |
|
|
| T |
23811843 |
atatgatttgatttcttcaaaagccttttggtgttctggttccagtttgaacacatcttctttcttcagacgaagtaatggcgataaagcttgtgttttg |
23811942 |
T |
|
| Q |
104 |
ccacttagatttgatat-------------gaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattgc |
190 |
Q |
| |
|
|||||||| || ||||| |||||||||||||||||||||| || |||||||||||||| || ||||| ||||||||||| |||||||| |
|
|
| T |
23811943 |
ccacttaggttcgatataaacaccttctgagaaagttgatttttcctaacaaagactgcaactctttctttgtcgaaggggcttgagtctccattattgc |
23812042 |
T |
|
| Q |
191 |
cttggttttgtt |
202 |
Q |
| |
|
|||||||||||| |
|
|
| T |
23812043 |
cttggttttgtt |
23812054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 136895 - 137145
Alignment:
| Q |
1 |
cagatatgacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgtt |
100 |
Q |
| |
|
|||||||||||||||||||||||| || |||||||||| | ||||||||| |||| ||| |||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
136895 |
cagatatgacttgatttcatcgaaagctgtttggtgctctggctcccatttgaaaacatcatctttctttagtcggagtaaaggcgagaaagcttgtgtc |
136994 |
T |
|
| Q |
101 |
ttgccacttagatttgatat-----------gaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattg |
189 |
Q |
| |
|
|||||||||| ||||||||| |||||||||| |||||||| | ||| |||||||||||||||||||||||||||| ||||| ||||||| |
|
|
| T |
136995 |
ttgccacttaaatttgatataaaccttctgagaaagttgatctttcctaatagtgactgcaactctttcttcgtagaaggagctttggtctcgattattg |
137094 |
T |
|
| Q |
190 |
ccttggttttgttctggttgatttcgattccctttttatgcaacacgaaac |
240 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
137095 |
ccttggttttattctggttgatttcgattccctttttatgcaccacaaaac |
137145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 21513343 - 21513093
Alignment:
| Q |
1 |
cagatatgacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgtt |
100 |
Q |
| |
|
|||||||||||||||||||||||| || ||||| || || || |||||||| |||| ||| |||||||||| |||||||| ||| |||||||||||||| |
|
|
| T |
21513343 |
cagatatgacttgatttcatcgaaagctttttgttgttctgtttcccatttgaaaacatcatctttctttagtcggagtaatggtgagaaagcttgtgtc |
21513244 |
T |
|
| Q |
101 |
ttgccacttagatttgatat-----------gaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattg |
189 |
Q |
| |
|
|| ||||||||||||||||| ||||||| |||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
21513243 |
ttaccacttagatttgatataaacctccggagaaagttaatttttcccagtaatgattgcaactctttcttcgtagaaggagctttggtctcaattattg |
21513144 |
T |
|
| Q |
190 |
ccttggttttgttctggttgatttcgattccctttttatgcaacacgaaac |
240 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
21513143 |
ccttggttttgttctcgttgatttcgattccctttttatgcactacgaaac |
21513093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 118; Significance: 3e-60; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 4 - 240
Target Start/End: Complemental strand, 16212588 - 16212341
Alignment:
| Q |
4 |
atatgacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgttttg |
103 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||| | ||||| || |||| ||| |||||||||| |||||||| |||||||||||||||||| || |
|
|
| T |
16212588 |
atatgacttgatttcatcgagagctttttggtgctctggttcccacttgaaaacatcatctttctttagtcggagtaatggcgagaaagcttgtgtctta |
16212489 |
T |
|
| Q |
104 |
ccacttagatttgatat-----------gaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattgcct |
192 |
Q |
| |
|
|||||||| |||||||| |||||||||||||||| || ||||| ||||| |||||||||||||||||||||| |||||||||||||| | |
|
|
| T |
16212488 |
ccacttaggtttgatataaatctccggagaaagttgatttttcccaataatgactgcaattctttcttcgtagaaggagctttggtctcaattattgctt |
16212389 |
T |
|
| Q |
193 |
tggttttgttctggttgatttcgattccctttttatgcaacacgaaac |
240 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
16212388 |
tggttttgttctggttgatttcgattccctttttatgcaccacgaaac |
16212341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 240
Target Start/End: Original strand, 19033023 - 19033270
Alignment:
| Q |
4 |
atatgacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgttttg |
103 |
Q |
| |
|
|||||||||||||||||| || || |||||||| || | |||||| |||| ||| |||||||||| |||||||| ||| |||||||||||||| || |
|
|
| T |
19033023 |
atatgacttgatttcatcaaaagctttttggtgatctgataaccatttgaaaacatcatctttctttagtcggagtaatggtgagaaagcttgtgtctta |
19033122 |
T |
|
| Q |
104 |
ccacttagatttgatat-----------gaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattgcct |
192 |
Q |
| |
|
|||||||| |||||||| |||||||||||||||| | | || ||||||||| |||| ||||||||||||| ||||| |||||||||| |
|
|
| T |
19033123 |
ccacttaggtttgatataaacctccggagaaagttgatttttcccagtagagactgcaactctctctttgtagaaggagctttggtctcgattattgcct |
19033222 |
T |
|
| Q |
193 |
tggttttgttctggttgatttcgattccctttttatgcaacacgaaac |
240 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
19033223 |
tggttttgttctggttgatttcgattccctttttatgcacgacgaaac |
19033270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0241 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0241
Description:
Target: scaffold0241; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 13807 - 13557
Alignment:
| Q |
1 |
cagatatgacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgtt |
100 |
Q |
| |
|
||||||||||||||||||||| || || ||||||||||| | |||||||| |||| ||| ||||||||| |||||||| ||| |||||||||||||| |
|
|
| T |
13807 |
cagatatgacttgatttcatcaaaagctttttggtgctctggttcccatttgaaaacatcatctttctttggtcggagtaatggtgagaaagcttgtgtc |
13708 |
T |
|
| Q |
101 |
ttgccacttagatttgatat-----------gaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattg |
189 |
Q |
| |
|
|| ||||| | ||||||||| |||||||||||||||| | ||||| ||||| |||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
13707 |
tttccactcaaatttgatataaacctccgtagaaagttgatttttcccagtaatgactgcaattctttcttcgtagaaggaactttggtctcaattattg |
13608 |
T |
|
| Q |
190 |
ccttggttttgttctggttgatttcgattccctttttatgcaacacgaaac |
240 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
13607 |
ccttggttttgttctggttgatttcgattccctttttatgcactacgaaac |
13557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0304 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0304
Description:
Target: scaffold0304; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 4 - 240
Target Start/End: Original strand, 20879 - 21126
Alignment:
| Q |
4 |
atatgacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgttttg |
103 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||| | ||||||||| |||| ||| |||||||||| |||||||||||| |||||||||||||| ||| |
|
|
| T |
20879 |
atatgacttgatttcatcgaaagctttttggtgctctggctcccatttgaaaacatcatctttctttagtcggagtagtggtgagaaagcttgtgtcttg |
20978 |
T |
|
| Q |
104 |
ccacttagatttgatat-----------gaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattgcct |
192 |
Q |
| |
|
|||||||| |||||||| |||||||||| ||||||| | || |||||||||||||| ||||||||||||| || || |||||||| | |
|
|
| T |
20979 |
ccacttaggtttgatataaacctccggagaaagttgatctttcctagtagagactgcaactctttctttgtagaaggagctttggtttcgattattgctt |
21078 |
T |
|
| Q |
193 |
tggttttgttctggttgatttcgattccctttttatgcaacacgaaac |
240 |
Q |
| |
|
| ||||||||||||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
21079 |
tagttttgttctggttgatttcgatcccctttttatgcacgacgaaac |
21126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0040 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0040
Description:
Target: scaffold0040; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 4 - 240
Target Start/End: Complemental strand, 33316 - 33069
Alignment:
| Q |
4 |
atatgacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgttttg |
103 |
Q |
| |
|
||||||||||||||||| ||| || |||||||| || | |||||||| |||| ||| |||||||||| |||||||||||| |||||||||||||||||| |
|
|
| T |
33316 |
atatgacttgatttcattgaaagctttttggtgttctggttcccatttgaaaacatcatctttctttagtcggagtagtggtgagaaagcttgtgttttg |
33217 |
T |
|
| Q |
104 |
ccacttagatttgatat-----------gaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattgcct |
192 |
Q |
| |
|
|||||||| |||||||| |||||||||| || |||| | || |||||||||||||| ||||||||||||| ||||| |||||||||| |
|
|
| T |
33216 |
ccacttaggtttgatataaacctccggagaaagttgatcttgcctagtagagactgcaactctttctttgtagaaggagctttggtctcgattattgcct |
33117 |
T |
|
| Q |
193 |
tggttttgttctggttgatttcgattccctttttatgcaacacgaaac |
240 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||| ||||||| |
|
|
| T |
33116 |
tggttttgttctggttgatttcgattccttttttatgcacgacgaaac |
33069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 4 - 231
Target Start/End: Complemental strand, 13365 - 13127
Alignment:
| Q |
4 |
atatgacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgttttg |
103 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||| | |||||||| |||| ||| |||||||||| |||||||||||| |||||||||||||| ||| |
|
|
| T |
13365 |
atatgacttgatttcatcgaaagctttttggtgctctggttcccatttgaaaacatcatctttctttagtcggagtagtggtgagaaagcttgtgtcttg |
13266 |
T |
|
| Q |
104 |
ccacttagatttgatat-----------gaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattgcct |
192 |
Q |
| |
|
||||||| |||||||| |||||||||| ||||||| | || |||||||||||||| ||||||||||| | |||||||||||||||| |
|
|
| T |
13265 |
ccacttaagtttgatatgaacctccggagaaagttgatctttcctagtagggactgcaactctttctttgtagaaggagccttggtctcaattattgcct |
13166 |
T |
|
| Q |
193 |
tggttttgttctggttgatttcgattccctttttatgca |
231 |
Q |
| |
|
||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
13165 |
tggttttgttctggttgatctcgatcccctttttatgca |
13127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 101; Significance: 4e-50; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 4 - 231
Target Start/End: Original strand, 13304756 - 13304994
Alignment:
| Q |
4 |
atatgacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgttttg |
103 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||| | |||||||| || | ||| ||||||||||||||||||||||| |||||||||||||| ||| |
|
|
| T |
13304756 |
atatgacttgatttcatcgaaagctttttggtgctcggattcccatttgaagacatcatctttctttaatcggagtagtggtgagaaagcttgtgtcttg |
13304855 |
T |
|
| Q |
104 |
ccacttagatttgatat-----------gaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattgcct |
192 |
Q |
| |
|
|||||||| |||||||| ||||||||||||||||||| | || || || |||||||| ||||||||||| | |||||||||||||||| |
|
|
| T |
13304856 |
ccacttaggtttgatataaaccttcggagaaagttgatttttcctaatagagactgtaattctttctttgtagaaggagccttggtctcaattattgcct |
13304955 |
T |
|
| Q |
193 |
tggttttgttctggttgatttcgattccctttttatgca |
231 |
Q |
| |
|
||||||||||||||||||| |||||||| ||||| |||| |
|
|
| T |
13304956 |
tggttttgttctggttgatctcgattccttttttgtgca |
13304994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 8 - 231
Target Start/End: Complemental strand, 10784503 - 10784269
Alignment:
| Q |
8 |
gacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgttttgccac |
107 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| | |||||||| |||| ||| |||||||| ||||| |||||||| |||||||||||||| |||||| |
|
|
| T |
10784503 |
gacttgatttcatcgaaggctttttggtgctcaggttcccatttgaaaacatcatctttcttcaatcgaagtagtggtgagaaagcttgtgtcctgccac |
10784404 |
T |
|
| Q |
108 |
ttagatttgatat-----------gaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattgccttggt |
196 |
Q |
| |
|
||||||||||||| |||||||||||||||| || | || || || |||||||||||||| ||||||| |||||| |||||||| ||||| |
|
|
| T |
10784403 |
ttagatttgatataaatcttcggagaaagttgatttttcccaatagagactgtaattctttcttcgtagagggagctttagtctcgattattgctttggt |
10784304 |
T |
|
| Q |
197 |
tttgttctggttgatttcgattccctttttatgca |
231 |
Q |
| |
|
||||||||||||||| |||||||| ||||| |||| |
|
|
| T |
10784303 |
tttgttctggttgatctcgattccttttttgtgca |
10784269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 4 - 238
Target Start/End: Complemental strand, 10155333 - 10155088
Alignment:
| Q |
4 |
atatgacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgttttg |
103 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||| | |||||||| |||| ||| |||||||||| |||||||| ||| |||||||||||||| || |
|
|
| T |
10155333 |
atatgacttgatttcatcgaaagctttttggtgctctggttcccatttgaaaacatcatctttctttagtcggagtaatggtgagaaagcttgtgtctta |
10155234 |
T |
|
| Q |
104 |
ccacttagatttgatat-----------gaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattgcct |
192 |
Q |
| |
|
|||||||| |||||||| |||||||||| || |||| | || |||||||||||||| ||||||||||| | ||||| |||| ||| | |
|
|
| T |
10155233 |
ccacttaggtttgatataaacctccggagaaagttgatcttccctagtagagactgcaactctttcttggtagaaggagccttggtctcgattaatgctt |
10155134 |
T |
|
| Q |
193 |
tggttttgttctggttgatttcgattccctttttatgcaacacgaa |
238 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
10155133 |
tggttttgttctggttgatttcgattccctttttatgcaagacgaa |
10155088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 8 - 240
Target Start/End: Original strand, 14691290 - 14691533
Alignment:
| Q |
8 |
gacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgttttgccac |
107 |
Q |
| |
|
||||||||||||||||| || ||||||||||| | |||||||| |||||||| |||||||| || || || ||||| |||||||||||||| ||||||| |
|
|
| T |
14691290 |
gacttgatttcatcgaaagctttttggtgctcaggttcccatttgaaaatatcatctttcttcaaccgaagcagtggtgagaaagcttgtgtcttgccac |
14691389 |
T |
|
| Q |
108 |
ttagatttgatat-----------gaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattgccttggt |
196 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| | || || || |||||||| ||||||||||| | |||||||||||||| ||||| |
|
|
| T |
14691390 |
ttagatttgatataaatcttcggagaaagttgatttttcctaatagagactgtaattctttctttgtagaaggagccttggtctcaattattgctttggt |
14691489 |
T |
|
| Q |
197 |
tttgttctggttgatttcgattccctttttatgcaacacgaaac |
240 |
Q |
| |
|
||||||||||||||| |||||||| ||||| |||| ||||||| |
|
|
| T |
14691490 |
tttgttctggttgatctcgattccttttttgtgcacaacgaaac |
14691533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 8 - 240
Target Start/End: Original strand, 7363293 - 7363536
Alignment:
| Q |
8 |
gacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgttttgccac |
107 |
Q |
| |
|
||||||||||||||||| || ||||||||||| | |||||||| |||||||| |||||||| || || || ||||| |||||||| ||||| ||||||| |
|
|
| T |
7363293 |
gacttgatttcatcgaaagctttttggtgctcaggttcccatttgaaaatatcatctttcttcaaccgaagcagtggtgagaaagcctgtgtcttgccac |
7363392 |
T |
|
| Q |
108 |
ttagatttgatat-----------gaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattgccttggt |
196 |
Q |
| |
|
||||||||||||| ||||||||||||| ||||| | || || || |||||||| ||||||||||| | |||||||||||||| ||||| |
|
|
| T |
7363393 |
ttagatttgatataaatcttcggagaaagttgattttccctaatagagactgtaattctttctttgtagaaggagccttggtctcaattattgctttggt |
7363492 |
T |
|
| Q |
197 |
tttgttctggttgatttcgattccctttttatgcaacacgaaac |
240 |
Q |
| |
|
||||||||||||||| |||||||| ||||| |||| ||||||| |
|
|
| T |
7363493 |
tttgttctggttgatctcgattccttttttgtgcacaacgaaac |
7363536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0051 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0051
Description:
Target: scaffold0051; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 4 - 231
Target Start/End: Complemental strand, 71776 - 71538
Alignment:
| Q |
4 |
atatgacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgttttg |
103 |
Q |
| |
|
|||||||||||||||| |||| |||||||||||||| | |||||||| |||| ||| |||||| |||||||||||||||| |||||||||||||| ||| |
|
|
| T |
71776 |
atatgacttgatttcagcgaaagccttttggtgctctggttcccatttgaaaacatcatctttcattaatcggagtagtggtgagaaagcttgtgtcttg |
71677 |
T |
|
| Q |
104 |
ccacttagatttgatat-----------gaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattgcct |
192 |
Q |
| |
|
| |||||| |||||||| ||||||||||||||||||| | || || || |||||||| ||||||||||| | |||||||||||||||| |
|
|
| T |
71676 |
ctacttaggtttgatataaagcgtcggagaaagttgatttttcctaatagagactgtaattctttctttgtagaaggagccttggtctcaattattgcct |
71577 |
T |
|
| Q |
193 |
tggttttgttctggttgatttcgattccctttttatgca |
231 |
Q |
| |
|
||||||||||||||||||| |||||||| ||||| |||| |
|
|
| T |
71576 |
tggttttgttctggttgatctcgattccttttttgtgca |
71538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 90; Significance: 1e-43; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 8 - 240
Target Start/End: Original strand, 14340504 - 14340747
Alignment:
| Q |
8 |
gacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgttttgccac |
107 |
Q |
| |
|
||||||||||||||||| || ||||||||||| | |||||||| |||||||| |||||||| ||||| || | ||| |||||||||||||| ||||||| |
|
|
| T |
14340504 |
gacttgatttcatcgaaagctttttggtgctcaggttcccatttgaaaatatcatctttcttcaatcgaagcaatggtgagaaagcttgtgtcttgccac |
14340603 |
T |
|
| Q |
108 |
ttagatttgatat-----------gaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattgccttggt |
196 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| | || || || |||||||| ||||||||||| | |||||||||||||| ||||| |
|
|
| T |
14340604 |
ttagatttgatataaatctttggagaaagttgatttttcctaatagagactgtaattctttctttgtagaaggagccttggtctcaattattgctttggt |
14340703 |
T |
|
| Q |
197 |
tttgttctggttgatttcgattccctttttatgcaacacgaaac |
240 |
Q |
| |
|
||||||||||||||| |||||||| ||||| |||| ||||||| |
|
|
| T |
14340704 |
tttgttctggttgatctcgattccttttttgtgcacaacgaaac |
14340747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 4 - 231
Target Start/End: Original strand, 18169476 - 18169714
Alignment:
| Q |
4 |
atatgacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgttttg |
103 |
Q |
| |
|
|||| |||||||||||||||| || ||||||||||| || |||||||| |||| ||| |||||||||| ||| |||||||| |||||| ||||||| ||| |
|
|
| T |
18169476 |
atataacttgatttcatcgaaagctttttggtgctctgtttcccatttgaaaacatcatctttctttagtcgaagtagtggtgagaaaacttgtgtcttg |
18169575 |
T |
|
| Q |
104 |
ccacttagatttgatat-----------gaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattgcct |
192 |
Q |
| |
|
|||||||| |||||||| |||||||||| ||||||| | || |||||||||||||| ||||||||||||| ||||| |||||||| | |
|
|
| T |
18169576 |
ccacttaggtttgatatgaaccttcggagaaagttgatctttcctagtagagactgcaactctttctttgtagaaggagctttggtctcgattattgctt |
18169675 |
T |
|
| Q |
193 |
tggttttgttctggttgatttcgattccctttttatgca |
231 |
Q |
| |
|
| ||||||||||||||||| ||||||||||||| ||||| |
|
|
| T |
18169676 |
ttgttttgttctggttgatctcgattcccttttaatgca |
18169714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 18458083 - 18458024
Alignment:
| Q |
58 |
atcttctttctttaatcggagtagtggcgagaaagcttgtgttttgccacttagatttga |
117 |
Q |
| |
|
||||||||||||| ||| ||||||||||||||||||| ||||||| |||||||||||| |
|
|
| T |
18458083 |
atcttctttctttggtcgaagtagtggcgagaaagcttcagttttgctacttagatttga |
18458024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0064 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0064
Description:
Target: scaffold0064; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 4 - 231
Target Start/End: Original strand, 35500 - 35738
Alignment:
| Q |
4 |
atatgacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgttttg |
103 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||| | |||||||| |||| ||| ||||||||||| ||||||||||| |||||||||||||| ||| |
|
|
| T |
35500 |
atatgacttgatttcatcgaaagctttttggtgctctggttcccatttgaaaacatcatctttctttaaacggagtagtggtgagaaagcttgtgtcttg |
35599 |
T |
|
| Q |
104 |
ccacttagatttgatat-----------gaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattgcct |
192 |
Q |
| |
|
|||||||| || ||||| ||||||||||||| |||| | || ||||||||||||||||| |||||||||| ||||| |||||||||| |
|
|
| T |
35600 |
ccacttaggttcgatataaacctccggagaaagttgattttccctagtagagactgcaactctttcttcgtggaaggagctttggtctcgattattgcct |
35699 |
T |
|
| Q |
193 |
tggttttgttctggttgatttcgattccctttttatgca |
231 |
Q |
| |
|
|||||||||| ||||| | |||||||| |||||||||| |
|
|
| T |
35700 |
tggttttgttttggttattctcgattccttttttatgca |
35738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023 (Bit Score: 88; Significance: 2e-42; HSPs: 4)
Name: scaffold0023
Description:
Target: scaffold0023; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 121 - 240
Target Start/End: Complemental strand, 66426 - 66307
Alignment:
| Q |
121 |
gaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattgccttggttttgttctggttgatttcgattcc |
220 |
Q |
| |
|
|||||||||||||||||| ||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
66426 |
gaaagttgatttttcctagtaatgactgcaattctttcttcgtagaaggagctttggtctcaattattgccttggttttgttctggttgatttcgattcc |
66327 |
T |
|
| Q |
221 |
ctttttatgcaacacgaaac |
240 |
Q |
| |
|
||||||||||| ||||||| |
|
|
| T |
66326 |
ctttttatgcactacgaaac |
66307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 121 - 240
Target Start/End: Complemental strand, 75604 - 75485
Alignment:
| Q |
121 |
gaaagttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattgccttggttttgttctggttgatttcgattcc |
220 |
Q |
| |
|
|||||||||||||||||| ||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
75604 |
gaaagttgatttttcctagtaatgactgcaattctttcttcgtagaaggagctttggtctcaattattgccttggttttgttctggttgatttcgattcc |
75505 |
T |
|
| Q |
221 |
ctttttatgcaacacgaaac |
240 |
Q |
| |
|
||||||||||| ||||||| |
|
|
| T |
75504 |
ctttttatgcactacgaaac |
75485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 66513 - 66422
Alignment:
| Q |
1 |
cagatatgacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaag |
92 |
Q |
| |
|
||||||||||||||||||||| || || |||||||| | | |||||||| |||| ||| |||||||||| |||||||| ||| ||||||| |
|
|
| T |
66513 |
cagatatgacttgatttcatcaaaagctttttggtgttttggttcccatttgaaaacatcatctttctttagtcggagtattggtgagaaag |
66422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 75691 - 75600
Alignment:
| Q |
1 |
cagatatgacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaag |
92 |
Q |
| |
|
||||||||||||||||||||| || || |||||||| | | |||||||| |||| ||| |||||||||| |||||||| ||| ||||||| |
|
|
| T |
75691 |
cagatatgacttgatttcatcaaaagctttttggtgttttggttcccatttgaaaacatcatctttctttagtcggagtattggtgagaaag |
75600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0013
Description:
Target: scaffold0013; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 240
Target Start/End: Complemental strand, 151198 - 150951
Alignment:
| Q |
4 |
atatgacttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgttttg |
103 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||| | | ||| |||| |||| |||||| ||||| || || |||| |||||||| ||||| ||| ||| |
|
|
| T |
151198 |
atatgatttgattttgtcgaaggccttttggtgttttggttccaatttgaaaacatcttccttcttcaagcgaagtaatggcgagacagcttatgtcttg |
151099 |
T |
|
| Q |
104 |
ccacttagatttgatatgaa-----------agttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattgcct |
192 |
Q |
| |
|
||||||| ||| |||||||| |||| |||||| ||| || || |||||||||||||| |||||||| || ||||||||||||||||||| |
|
|
| T |
151098 |
ccacttaaattcgatatgaatcttctaagaaagtttattttttctagtaaagactgcaactctttctttgtagaaggggcctgagtctcaattattgcct |
150999 |
T |
|
| Q |
193 |
tggttttgttctggttgatttcgattccctttttatgcaacacgaaac |
240 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| | |||||||| |
|
|
| T |
150998 |
tggttttgttctggttgatttcaattccctttttatggaccacgaaac |
150951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0100 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0100
Description:
Target: scaffold0100; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 226
Target Start/End: Complemental strand, 1323 - 1097
Alignment:
| Q |
11 |
ttgatttcatcgaaggccttttggtgctccgtctcccatttaaaaatatcttctttctttaatcggagtagtggcgagaaagcttgtgttttgccactta |
110 |
Q |
| |
|
|||||||| ||||| ||| |||||||||| | |||||||| || |||||||||||||| | || |||| |||||||||| | ||||| |||||||||| |
|
|
| T |
1323 |
ttgatttcttcgaaagccctttggtgctctggttcccatttgaacatatcttctttcttcagacgaagtaatggcgagaaaacctgtgtcttgccactta |
1224 |
T |
|
| Q |
111 |
gatttgatatgaa-----------agttgatttttcctaacaatgattgcaactctttcttcgtagaaggagcttgagtctcaattattgccttggtttt |
199 |
Q |
| |
|
|||| |||||||| ||||||||||||| || || || |||| |||||||| |||||||| ||||||||||| |||||| |||||||||| |
|
|
| T |
1223 |
gattcgatatgaatcttttgagaaagttgatttttcccaataaagactgcagatctttctttgtagaaggggcttgagtctctattattaccttggtttt |
1124 |
T |
|
| Q |
200 |
gttctggttgatttcgattcccttttt |
226 |
Q |
| |
|
||| |||| ||||| ||||||||||| |
|
|
| T |
1123 |
gttttggtaaatttcaattcccttttt |
1097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0757 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0757
Description:
Target: scaffold0757; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 3147 - 3088
Alignment:
| Q |
58 |
atcttctttctttaatcggagtagtggcgagaaagcttgtgttttgccacttagatttga |
117 |
Q |
| |
|
|||| ||||||| ||||| || |||||||||||||||| |||||||||| ||||||||| |
|
|
| T |
3147 |
atctgctttcttcaatcgaagcagtggcgagaaagcttcagttttgccacatagatttga |
3088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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