View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7320_high_30 (Length: 250)
Name: NF7320_high_30
Description: NF7320
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7320_high_30 |
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Alignment Details
Target: chr5 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 14787178 - 14787394
Alignment:
| Q |
19 |
ataacaacaaaactaacatggcaacatatattaaatagttgaaatctatgtcactcttaaaccatgaagtagtacaatggcaccaaagaaatact-aaac |
117 |
Q |
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| T |
14787178 |
ataacaacaaaactaacatggcaacatatattaaatagttgaaatctatgtcactcttaaaccatgaagtagtacaatggcaccaaagaaatacttaaac |
14787277 |
T |
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| Q |
118 |
atttgtcagattttcacatggttaataaaaactaagttcataatttcatatcataagtacctataaccattaaaataatatcctagaaacatcttcctca |
217 |
Q |
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| T |
14787278 |
atttgtcagattttcacatggttaataaaaactaagttcataatttcatatcataagtacctataaccattaaaataatatcctagaaacatcttcctca |
14787377 |
T |
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| Q |
218 |
atatatgacctcccaca |
234 |
Q |
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||||||||||||||||| |
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| T |
14787378 |
atatatgacctcccaca |
14787394 |
T |
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