View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7320_high_33 (Length: 244)
Name: NF7320_high_33
Description: NF7320
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7320_high_33 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 10 - 244
Target Start/End: Complemental strand, 46838175 - 46837941
Alignment:
| Q |
10 |
atgaactaggctgacaggactaaagtattttattcttctgagtataaatactaaaatgttgtttaatgaatatactgtcacacacaaagagtgatttata |
109 |
Q |
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| T |
46838175 |
atgaattaggctgacaggactaaagtattttattcttctgagtataaatactaaaatgttgtttaatgaatatactgtcacacacaaagactgatttata |
46838076 |
T |
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| Q |
110 |
cgtacaacagggcgctgtgacaccatcccttgagcttgaagttagctcaaaatatcttctgcttcaagagatgcgtacttgaggatggcagcaagaatcc |
209 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
46838075 |
cgtacaacagggcgctgtgacaccatcccttgagcttgaagttagctcaaaatatcttctgcttcaagagatgagtacttgaggatggcagcaagaatcc |
46837976 |
T |
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| Q |
210 |
tttctttgtctctggttgggaatgcttccaacagt |
244 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
46837975 |
tttctttgtctctggttgggaatgcttccaacagt |
46837941 |
T |
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