View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7320_low_35 (Length: 255)
Name: NF7320_low_35
Description: NF7320
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7320_low_35 |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 213; Significance: 1e-117; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 19 - 235
Target Start/End: Original strand, 11854264 - 11854480
Alignment:
| Q |
19 |
tggagatggaggtggtccttcagaatgtgacaagcagtatcattccgatgacactcccgttgttgcactctcaaccggatggttcagccacaagagcagg |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
11854264 |
tggagatggaggtggtccttcagaatgtgacaagcagtatcattccgatgacactcccgttgttgcactctcaaccggatggttcaaccacaagagcagg |
11854363 |
T |
 |
| Q |
119 |
tgcctcaacaacattaccataagtgcgaatggaaaaagtgtggtggccatggttgttgatgagtgtgactccagaaagggatgtgatgaacaacatgatt |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11854364 |
tgcctcaacaacattaccataagtgcgaatggaaaaagtgtggtggccatggttgttgatgagtgtgactccagaaagggatgtgatgaacaacatgatt |
11854463 |
T |
 |
| Q |
219 |
accaacctccttgtcca |
235 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
11854464 |
accaacctccttgtcca |
11854480 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 19 - 235
Target Start/End: Original strand, 11851550 - 11851766
Alignment:
| Q |
19 |
tggagatggaggtggtccttcagaatgtgacaagcagtatcattccgatgacactcccgttgttgcactctcaaccggatggttcagccacaagagcagg |
118 |
Q |
| |
|
|||||||||||| || ||||||| ||||| || || |||||||| ||||||||||| ||||||||||| || ||||||||||||| | |||||||||| |
|
|
| T |
11851550 |
tggagatggaggcggaccttcagcgtgtgataatcaatatcattctgatgacactccagttgttgcactttccaccggatggttcaacgacaagagcaga |
11851649 |
T |
 |
| Q |
119 |
tgcctcaacaacattaccataagtgcgaatggaaaaagtgtggtggccatggttgttgatgagtgtgactccagaaagggatgtgatgaacaacatgatt |
218 |
Q |
| |
|
|| |||||||| |||||||||||||| ||||||| |||||||||||||| || ||||||||||||||||| | | ||||||||||||| ||||||||| |
|
|
| T |
11851650 |
tgtctcaacaagattaccataagtgccaatggaagaagtgtggtggccactgtggttgatgagtgtgactctacgatgggatgtgatgaagaacatgatt |
11851749 |
T |
 |
| Q |
219 |
accaacctccttgtcca |
235 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
11851750 |
accaacctccttgtcca |
11851766 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 19 - 232
Target Start/End: Complemental strand, 11850144 - 11849931
Alignment:
| Q |
19 |
tggagatggaggtggtccttcagaatgtgacaagcagtatcattccgatgacactcccgttgttgcactctcaaccggatggttcagccacaagagcagg |
118 |
Q |
| |
|
||||||||||||||||||||||| ||||| || || |||||||| |||||||| || ||||||||||| || || |||||||||| | ||||||| || |
|
|
| T |
11850144 |
tggagatggaggtggtccttcagcgtgtgataatcaatatcattctgatgacaccccagttgttgcactttctactggatggttcaacaacaagagtaga |
11850045 |
T |
 |
| Q |
119 |
tgcctcaacaacattaccataagtgcgaatggaaaaagtgtggtggccatggttgttgatgagtgtgactccagaaagggatgtgatgaacaacatgatt |
218 |
Q |
| |
|
|| |||||||| |||| || |||||||| |||| |||||||||||||| ||||||||||||||||| || ||| ||||| ||| || ||||||||| |
|
|
| T |
11850044 |
tgtctcaacaaaattaagattagtgcgaacggaagaagtgtggtggccaaagttgttgatgagtgtgattcgagagcaggatgcgataaagaacatgatt |
11849945 |
T |
 |
| Q |
219 |
accaacctccttgt |
232 |
Q |
| |
|
| |||||||||||| |
|
|
| T |
11849944 |
atcaacctccttgt |
11849931 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 14)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 19 - 235
Target Start/End: Complemental strand, 29069160 - 29068944
Alignment:
| Q |
19 |
tggagatggaggtggtccttcagaatgtgacaagcagtatcattccgatgacactcccgttgttgcactctcaaccggatggttcagccacaagagcagg |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
29069160 |
tggagatggaggtggtccttcagaatgtgacaagcagtatcattccgatgacactcccgttgttgcactctcaaccggatggttcaaccgcaagagcagg |
29069061 |
T |
 |
| Q |
119 |
tgcctcaacaacattaccataagtgcgaatggaaaaagtgtggtggccatggttgttgatgagtgtgactccagaaagggatgtgatgaacaacatgatt |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29069060 |
tgcctcaacaacattaccataagtgcgaatggaaaaagtgtggtggccatggttgttgatgagtgtgactccagaaagggatgtgatgaacaacatgatt |
29068961 |
T |
 |
| Q |
219 |
accaacctccttgtcca |
235 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
29068960 |
accaacctccttgtcca |
29068944 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 23 - 235
Target Start/End: Original strand, 28956756 - 28956968
Alignment:
| Q |
23 |
gatggaggtggtccttcagaatgtgacaagcagtatcattccgatgacactcccgttgttgcactctcaaccggatggttcagccacaagagcaggtgcc |
122 |
Q |
| |
|
||||||||||| |||||||||||||| || || || ||||| ||||||||||| ||||||||||| || ||||||||||||| |||| |||||||||| | |
|
|
| T |
28956756 |
gatggaggtggcccttcagaatgtgataatcaataccattctgatgacactccagttgttgcactttccaccggatggttcaaccacgagagcaggtgtc |
28956855 |
T |
 |
| Q |
123 |
tcaacaacattaccataagtgcgaatggaaaaagtgtggtggccatggttgttgatgagtgtgactccagaaagggatgtgatgaacaacatgattacca |
222 |
Q |
| |
|
|||| |||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |
|
|
| T |
28956856 |
tcaaaaacattacaattagtgcgaatgggaaaagtgtggtggccatggttgttgatgagtgtgactccacaaagggatgtgatgaagaacatgattacca |
28956955 |
T |
 |
| Q |
223 |
acctccttgtcca |
235 |
Q |
| |
|
||||||||||||| |
|
|
| T |
28956956 |
acctccttgtcca |
28956968 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 19 - 235
Target Start/End: Complemental strand, 29111106 - 29110890
Alignment:
| Q |
19 |
tggagatggaggtggtccttcagaatgtgacaagcagtatcattccgatgacactcccgttgttgcactctcaaccggatggttcagccacaagagcagg |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| || ||||||||||||| ||| || |||||| |
|
|
| T |
29111106 |
tggagatggaggtggtccttcagaatgtgacaagcagtatcattctgatgacactcctgttgttgcactttccaccggatggttcaaccataaaagcagg |
29111007 |
T |
 |
| Q |
119 |
tgcctcaacaacattaccataagtgcgaatggaaaaagtgtggtggccatggttgttgatgagtgtgactccagaaagggatgtgatgaacaacatgatt |
218 |
Q |
| |
|
|| || ||||||||||| || ||||| ||||||| || ||| ||||||||||||||||| ||||| || || |||||||||||||||||||| ||||| | |
|
|
| T |
29111006 |
tgtctaaacaacattacaatcagtgctaatggaagaaatgtcgtggccatggttgttgacgagtgcgattctagaaagggatgtgatgaacagcatgact |
29110907 |
T |
 |
| Q |
219 |
accaacctccttgtcca |
235 |
Q |
| |
|
||||||| || |||||| |
|
|
| T |
29110906 |
accaaccaccgtgtcca |
29110890 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 19 - 232
Target Start/End: Complemental strand, 29078355 - 29078142
Alignment:
| Q |
19 |
tggagatggaggtggtccttcagaatgtgacaagcagtatcattccgatgacactcccgttgttgcactctcaaccggatggttcagccacaagagcagg |
118 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||| || ||||||||||||| ||| || |||||| |
|
|
| T |
29078355 |
tggagatggaggcggtccttcagaatgtgacaagcaatatcattcagatgacactcctgttgttgcactttccaccggatggttcaaccataaaagcagg |
29078256 |
T |
 |
| Q |
119 |
tgcctcaacaacattaccataagtgcgaatggaaaaagtgtggtggccatggttgttgatgagtgtgactccagaaagggatgtgatgaacaacatgatt |
218 |
Q |
| |
|
|| || ||||||||||| || ||||| ||||||| || ||| |||||||||||||| || ||||| || || |||||||||||||||||||| ||||| | |
|
|
| T |
29078255 |
tgtctaaacaacattacaatcagtgctaatggaagaaatgtcgtggccatggttgtcgacgagtgcgattctagaaagggatgtgatgaacagcatgact |
29078156 |
T |
 |
| Q |
219 |
accaacctccttgt |
232 |
Q |
| |
|
||||||| |||||| |
|
|
| T |
29078155 |
accaaccaccttgt |
29078142 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 19 - 235
Target Start/End: Complemental strand, 3617701 - 3617485
Alignment:
| Q |
19 |
tggagatggaggtggtccttcagaatgtgacaagcagtatcattccgatgacactcccgttgttgcactctcaaccggatggttcagccacaagagcagg |
118 |
Q |
| |
|
||||||||||||||| ||||||| |||||| || ||||||||||| ||||| || || || |||||||| || || |||||||||| | |||||||||| |
|
|
| T |
3617701 |
tggagatggaggtggcccttcagcatgtgataatcagtatcattctgatgatacaccagtcgttgcactttccacaggatggttcaacgacaagagcaga |
3617602 |
T |
 |
| Q |
119 |
tgcctcaacaacattaccataagtgcgaatggaaaaagtgtggtggccatggttgttgatgagtgtgactccagaaagggatgtgatgaacaacatgatt |
218 |
Q |
| |
|
|| || ||||| |||||||||||||| |||||||||||||| ||||||| ||| ||||||||||||||||| | || ||||||||||||| ||||||||| |
|
|
| T |
3617601 |
tgtctgaacaagattaccataagtgccaatggaaaaagtgtagtggccacggtggttgatgagtgtgactctacaatgggatgtgatgaagaacatgatt |
3617502 |
T |
 |
| Q |
219 |
accaacctccttgtcca |
235 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
3617501 |
accaacctccttgtcca |
3617485 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 29058394 - 29058182
Alignment:
| Q |
19 |
tggagatggaggtggtccttcagaatgtgacaagcagtatcattccgatgacactcccgttgttgcactctcaaccggatggttcagccacaagagcagg |
118 |
Q |
| |
|
||||||||||||||| ||||||| |||||| || ||||||||||| ||||||||||| || |||||||| || || |||||||||| | | |||||||| |
|
|
| T |
29058394 |
tggagatggaggtggcccttcagcatgtgataatcagtatcattctgatgacactccagtcgttgcactttccacaggatggttcaacgataagagcaga |
29058295 |
T |
 |
| Q |
119 |
tgcctcaacaacattaccataagtgcgaatggaaaaagtgtggtggccatggttgttgatgagtgtgactccagaaagggatgtgatgaacaacatgatt |
218 |
Q |
| |
|
|| |||||||| |||||||||||||| |||||||||||||| ||||||| ||| ||||||||||||||||| | || ||||||||||||| ||||||||| |
|
|
| T |
29058294 |
tgtctcaacaaaattaccataagtgccaatggaaaaagtgtagtggccacggtggttgatgagtgtgactcaacaatgggatgtgatgaagaacatgatt |
29058195 |
T |
 |
| Q |
219 |
accaacctccttg |
231 |
Q |
| |
|
| ||||||||||| |
|
|
| T |
29058194 |
atcaacctccttg |
29058182 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 19 - 235
Target Start/End: Complemental strand, 29071622 - 29071406
Alignment:
| Q |
19 |
tggagatggaggtggtccttcagaatgtgacaagcagtatcattccgatgacactcccgttgttgcactctcaaccggatggttcagccacaagagcagg |
118 |
Q |
| |
|
|||||||||||| || ||||||| ||||| || || |||||||| ||||||||||| ||||||||||| || ||||||||||||| | |||||||||| |
|
|
| T |
29071622 |
tggagatggaggcggaccttcagcgtgtgataatcaatatcattctgatgacactccagttgttgcactttccaccggatggttcaacgacaagagcaga |
29071523 |
T |
 |
| Q |
119 |
tgcctcaacaacattaccataagtgcgaatggaaaaagtgtggtggccatggttgttgatgagtgtgactccagaaagggatgtgatgaacaacatgatt |
218 |
Q |
| |
|
|| |||||||| |||||||||||||| ||||||| |||||| ||||||| || ||||||||||||||||| | | ||||||||||||| ||||||||| |
|
|
| T |
29071522 |
tgtctcaacaagattaccataagtgccaatggaagaagtgtagtggccactgtggttgatgagtgtgactctacgatgggatgtgatgaagaacatgatt |
29071423 |
T |
 |
| Q |
219 |
accaacctccttgtcca |
235 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
29071422 |
accaacctccttgtcca |
29071406 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 19 - 232
Target Start/End: Original strand, 3618950 - 3619163
Alignment:
| Q |
19 |
tggagatggaggtggtccttcagaatgtgacaagcagtatcattccgatgacactcccgttgttgcactctcaaccggatggttcagccacaagagcagg |
118 |
Q |
| |
|
|||||||||||| || ||||| | |||||| || || || ||||| ||||||||||| ||||||||||| || || |||||||||| | |||| || || |
|
|
| T |
3618950 |
tggagatggaggcggcccttcggcatgtgataaccaataccattctgatgacactcctgttgttgcactttccactggatggttcaacaacaaaagtaga |
3619049 |
T |
 |
| Q |
119 |
tgcctcaacaacattaccataagtgcgaatggaaaaagtgtggtggccatggttgttgatgagtgtgactccagaaagggatgtgatgaacaacatgatt |
218 |
Q |
| |
|
|| || ||||| |||||||| || |||||||||| ||||||||| |||| ||||||||||||||| ||||| | | |||||||||| || ||||||||| |
|
|
| T |
3619050 |
tgtctgaacaaaattaccatcagcgcgaatggaagaagtgtggttgccacggttgttgatgagtgcgactctacgatgggatgtgataaagaacatgatt |
3619149 |
T |
 |
| Q |
219 |
accaacctccttgt |
232 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
3619150 |
accaacctccttgt |
3619163 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 19 - 232
Target Start/End: Original strand, 29073024 - 29073237
Alignment:
| Q |
19 |
tggagatggaggtggtccttcagaatgtgacaagcagtatcattccgatgacactcccgttgttgcactctcaaccggatggttcagccacaagagcagg |
118 |
Q |
| |
|
||||||||||||||||||||||| ||||| || || |||||||| ||||||||||| ||||||||||| || | |||||||||| | ||||||| || |
|
|
| T |
29073024 |
tggagatggaggtggtccttcagcgtgtgataatcaatatcattctgatgacactccagttgttgcactttctagtggatggttcaacaacaagagtaga |
29073123 |
T |
 |
| Q |
119 |
tgcctcaacaacattaccataagtgcgaatggaaaaagtgtggtggccatggttgttgatgagtgtgactccagaaagggatgtgatgaacaacatgatt |
218 |
Q |
| |
|
|| |||||||| |||| || |||||||| |||| |||||||||||||| ||||||||||||||||| || ||| ||||| ||| || ||||||||| |
|
|
| T |
29073124 |
tgtctcaacaaaattaagattagtgcgaacggaagaagtgtggtggccaaagttgttgatgagtgtgattcgagagcaggatgcgataaagaacatgatt |
29073223 |
T |
 |
| Q |
219 |
accaacctccttgt |
232 |
Q |
| |
|
| |||||||||||| |
|
|
| T |
29073224 |
atcaacctccttgt |
29073237 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 19 - 232
Target Start/End: Original strand, 29116132 - 29116345
Alignment:
| Q |
19 |
tggagatggaggtggtccttcagaatgtgacaagcagtatcattccgatgacactcccgttgttgcactctcaaccggatggttcagccacaagagcagg |
118 |
Q |
| |
|
||||||||||||||||||||||| ||||| || || ||||||||||| ||||| || ||||||||||| || || |||||||||| | ||||||| || |
|
|
| T |
29116132 |
tggagatggaggtggtccttcagcgtgtgataatcaatatcattccgacgacaccccggttgttgcactttctactggatggttcaacaacaagagtaga |
29116231 |
T |
 |
| Q |
119 |
tgcctcaacaacattaccataagtgcgaatggaaaaagtgtggtggccatggttgttgatgagtgtgactccagaaagggatgtgatgaacaacatgatt |
218 |
Q |
| |
|
|| |||||||| |||| || |||||||| |||| |||||||||||||| ||||||||||||||||| || ||| ||||| ||| || ||||||||| |
|
|
| T |
29116232 |
tgtctcaacaaaattaagattagtgcgaacggaagaagtgtggtggccaaagttgttgatgagtgtgattcgagagcaggatgcgataaagaacatgatt |
29116331 |
T |
 |
| Q |
219 |
accaacctccttgt |
232 |
Q |
| |
|
| |||||||||||| |
|
|
| T |
29116332 |
atcaacctccttgt |
29116345 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 232
Target Start/End: Original strand, 29101987 - 29102200
Alignment:
| Q |
19 |
tggagatggaggtggtccttcagaatgtgacaagcagtatcattccgatgacactcccgttgttgcactctcaaccggatggttcagccacaagagcagg |
118 |
Q |
| |
|
||||||||||||||| ||||||| ||||| || || ||||||||||||||||| || ||||||||||| || || |||||||||| | ||||||| || |
|
|
| T |
29101987 |
tggagatggaggtggaccttcagcgtgtgataatcaatatcattccgatgacaccccggttgttgcactttctactggatggttcaacaacaagagtaga |
29102086 |
T |
 |
| Q |
119 |
tgcctcaacaacattaccataagtgcgaatggaaaaagtgtggtggccatggttgttgatgagtgtgactccagaaagggatgtgatgaacaacatgatt |
218 |
Q |
| |
|
|| |||||||| |||| || |||||||| |||| ||| |||||||||| ||||||||||||||||| || ||| ||||| ||| || ||||||||| |
|
|
| T |
29102087 |
tgtctcaacaaaattaagattagtgcgaacggaagaagcgtggtggccaaagttgttgatgagtgtgattcgagagcaggatgcgataaagaacatgatt |
29102186 |
T |
 |
| Q |
219 |
accaacctccttgt |
232 |
Q |
| |
|
| |||||||||||| |
|
|
| T |
29102187 |
atcaacctccttgt |
29102200 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 233
Target Start/End: Original strand, 29098267 - 29098477
Alignment:
| Q |
23 |
gatggaggtggtccttcagaatgtgacaagcagtatcattccgatgacactcccgttgttgcactctcaaccggatggttcagccacaagagcaggtgcc |
122 |
Q |
| |
|
||||| ||||||||||| | ||||| || || |||||||| || || ||| | ||||||||||| || | | |||||||| ||||||| || || | |
|
|
| T |
29098267 |
gatggtggtggtccttcgtattgtgataatcaatatcattctgacgatacttcagttgttgcactttccatctgatggttcgataacaagagtagatgtc |
29098366 |
T |
 |
| Q |
123 |
tcaacaacattaccataagtgcgaatggaaaaagtgtggtggccatggttgttgatgagtgtgactccagaaagggatgtgatgaacaacatgattacca |
222 |
Q |
| |
|
| |||||||||| | | ||| ||||||| |||||||||||||||||| || |||||| ||||||| | || | |||||||| || | ||||||||||| |
|
|
| T |
29098367 |
ttcacaacattacagtgaatgcaaatggaagaagtgtggtggccatggtagtcgatgagcgtgactctacaatgagatgtgataaagatcatgattacca |
29098466 |
T |
 |
| Q |
223 |
acctccttgtc |
233 |
Q |
| |
|
||||||||||| |
|
|
| T |
29098467 |
acctccttgtc |
29098477 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 131
Target Start/End: Original strand, 28982100 - 28982165
Alignment:
| Q |
66 |
atgacactcccgttgttgcactctcaaccggatggttcagccacaagagcaggtgcctcaacaaca |
131 |
Q |
| |
|
|||||||||| || |||||||| |||||||||||||||| |||| | || ||||||||||| |||| |
|
|
| T |
28982100 |
atgacactccagtagttgcactttcaaccggatggttcaaccacgacagtaggtgcctcaaaaaca |
28982165 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 104
Target Start/End: Original strand, 29061163 - 29061213
Alignment:
| Q |
54 |
agtatcattccgatgacactcccgttgttgcactctcaaccggatggttca |
104 |
Q |
| |
|
||||| ||||| |||||||||| || ||| ||||||||||||||||||||| |
|
|
| T |
29061163 |
agtattattccaatgacactccggtggtttcactctcaaccggatggttca |
29061213 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 130 - 232
Target Start/End: Complemental strand, 24241203 - 24241101
Alignment:
| Q |
130 |
cattaccataagtgcgaatggaaaaagtgtggtggccatggttgttgatgagtgtgactccagaaagggatgtgatgaacaacatgattaccaacctcct |
229 |
Q |
| |
|
||||||||| || || ||||| | |||||||||||||||| |||||||||||||||||| || || ||||||||||||| | ||||||||||| |||||| |
|
|
| T |
24241203 |
cattaccatcagcgccaatggtagaagtgtggtggccatgtttgttgatgagtgtgacttcacaatgggatgtgatgaagagcatgattaccagcctcct |
24241104 |
T |
 |
| Q |
230 |
tgt |
232 |
Q |
| |
|
||| |
|
|
| T |
24241103 |
tgt |
24241101 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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