View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7321_high_30 (Length: 286)
Name: NF7321_high_30
Description: NF7321
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7321_high_30 |
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Alignment Details
Target: chr3 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 274
Target Start/End: Complemental strand, 7271087 - 7270814
Alignment:
| Q |
1 |
cttttacttccccttttttcttctatcgctattcttagaagaagaaccttgatttaatttcttcaaaatcggtggtgggtttcttttctagcttgtttta |
100 |
Q |
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| T |
7271087 |
cttttacttccccttttttcttctatcgctattcttagaagaagaaccttgatttaatttcttcaaaatcggtggtgggtttcttttctagcttgtttta |
7270988 |
T |
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| Q |
101 |
aatagattgcagctaagttgtttatcagactcaaatgggttagaagggacagttatggtgttgttgctgagaagaaaattgtttaatnnnnnnncgaaaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |
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| T |
7270987 |
aatagattgcagctaagttgtttatcagactcaaatgggttagaagggacaattatggtgttgttgctgagaagaaaattgtttaataaaaaaacgaaaa |
7270888 |
T |
|
| Q |
201 |
cgagtggatgatgatgatgaagattttggggattttaatctctttatgttggtttgttttggctttgatttgat |
274 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
7270887 |
cgagtggatgatgatgatgaagattttggggattttaatctctttatgttggtttgttttggatttgatttgat |
7270814 |
T |
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