View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7321_low_24 (Length: 395)

Name: NF7321_low_24
Description: NF7321
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7321_low_24
NF7321_low_24
[»] chr3 (45 HSPs)
chr3 (42-238)||(9818508-9818704)
chr3 (42-236)||(53645267-53645451)
chr3 (71-238)||(49293764-49293931)
chr3 (71-229)||(40064248-40064406)
chr3 (92-232)||(37832539-37832679)
chr3 (73-235)||(29690596-29690757)
chr3 (81-171)||(47467394-47467484)
chr3 (102-200)||(8598658-8598756)
chr3 (92-239)||(27261367-27261500)
chr3 (81-235)||(19386874-19387027)
chr3 (102-200)||(49296115-49296213)
chr3 (92-235)||(30238489-30238633)
chr3 (102-200)||(53835961-53836059)
chr3 (102-200)||(16155163-16155261)
chr3 (113-235)||(7665555-7665677)
chr3 (102-199)||(22489488-22489585)
chr3 (108-200)||(21386494-21386586)
chr3 (102-199)||(4962735-4962832)
chr3 (102-199)||(20833344-20833441)
chr3 (81-200)||(52810804-52810924)
chr3 (113-200)||(25049870-25049957)
chr3 (102-172)||(33693283-33693353)
chr3 (113-195)||(52617639-52617721)
chr3 (114-199)||(17946675-17946760)
chr3 (102-199)||(50902965-50903062)
chr3 (102-199)||(51737343-51737440)
chr3 (102-198)||(7437575-7437671)
chr3 (134-226)||(27994807-27994899)
chr3 (112-199)||(49458358-49458445)
chr3 (133-235)||(2118472-2118573)
chr3 (161-235)||(9031981-9032055)
chr3 (102-200)||(23753045-23753143)
chr3 (102-200)||(37455293-37455391)
chr3 (113-171)||(39038565-39038623)
chr3 (102-200)||(48379596-48379694)
chr3 (102-200)||(50761756-50761854)
chr3 (102-199)||(26107776-26107873)
chr3 (102-198)||(18750091-18750187)
chr3 (42-78)||(27261495-27261531)
chr3 (102-200)||(31645917-31646015)
chr3 (102-172)||(36673808-36673878)
chr3 (116-199)||(43172927-43173010)
chr3 (102-172)||(40897605-40897675)
chr3 (114-200)||(54629297-54629383)
chr3 (102-171)||(34483754-34483823)
[»] chr5 (26 HSPs)
chr5 (42-235)||(34909556-34909749)
chr5 (42-238)||(25868760-25868938)
chr5 (49-238)||(33892802-33892982)
chr5 (94-238)||(2675070-2675214)
chr5 (92-232)||(21238753-21238893)
chr5 (71-235)||(19222987-19223138)
chr5 (102-200)||(7125169-7125267)
chr5 (92-229)||(16497730-16497867)
chr5 (81-235)||(16800693-16800846)
chr5 (149-236)||(24258534-24258621)
chr5 (92-230)||(31913467-31913605)
chr5 (102-195)||(5651191-5651284)
chr5 (102-199)||(28623171-28623268)
chr5 (113-200)||(4240133-4240220)
chr5 (102-200)||(1460802-1460900)
chr5 (92-198)||(29716785-29716891)
chr5 (102-200)||(37798124-37798222)
chr5 (102-197)||(5949562-5949657)
chr5 (113-199)||(16548860-16548946)
chr5 (113-199)||(29758706-29758791)
chr5 (102-200)||(37014302-37014400)
chr5 (90-219)||(3032287-3032415)
chr5 (102-199)||(39852819-39852916)
chr5 (108-200)||(4549920-4550012)
chr5 (102-198)||(15286536-15286634)
chr5 (113-199)||(13926380-13926466)
[»] chr2 (39 HSPs)
chr2 (42-233)||(13898442-13898633)
chr2 (42-233)||(14039059-14039250)
chr2 (49-238)||(19948499-19948688)
chr2 (42-238)||(33262814-33263010)
chr2 (71-238)||(38413427-38413594)
chr2 (43-199)||(3991773-3991929)
chr2 (71-238)||(41978798-41978965)
chr2 (71-233)||(12877652-12877805)
chr2 (92-235)||(11153344-11153487)
chr2 (70-235)||(43318733-43318886)
chr2 (92-171)||(45161127-45161206)
chr2 (102-200)||(18899932-18900030)
chr2 (102-199)||(35404323-35404420)
chr2 (70-194)||(37810855-37810979)
chr2 (92-195)||(24025852-24025955)
chr2 (110-195)||(15224234-15224319)
chr2 (71-228)||(30850239-30850395)
chr2 (102-200)||(40829635-40829733)
chr2 (102-195)||(2308718-2308811)
chr2 (102-199)||(18177720-18177817)
chr2 (102-200)||(379378-379476)
chr2 (102-200)||(10657878-10657976)
chr2 (113-199)||(15926378-15926464)
chr2 (102-200)||(28739950-28740048)
chr2 (103-172)||(18727652-18727721)
chr2 (102-198)||(3575291-3575387)
chr2 (116-200)||(3858440-3858524)
chr2 (92-172)||(26789261-26789341)
chr2 (114-200)||(25288611-25288697)
chr2 (71-157)||(28545788-28545874)
chr2 (102-199)||(6224233-6224330)
chr2 (102-199)||(7027352-7027449)
chr2 (102-199)||(28845034-28845131)
chr2 (102-171)||(38295722-38295791)
chr2 (102-171)||(43825317-43825386)
chr2 (81-200)||(33136064-33136184)
chr2 (114-171)||(43078967-43079024)
chr2 (102-171)||(43304976-43305044)
chr2 (42-70)||(45161096-45161124)
[»] chr4 (58 HSPs)
chr4 (42-239)||(56423921-56424118)
chr4 (73-233)||(51967243-51967403)
chr4 (92-238)||(6487314-6487460)
chr4 (239-379)||(32391104-32391244)
chr4 (42-235)||(8563313-8563497)
chr4 (92-236)||(9972736-9972880)
chr4 (42-207)||(23170677-23170842)
chr4 (98-239)||(40162749-40162890)
chr4 (82-238)||(26448592-26448748)
chr4 (71-207)||(54561211-54561347)
chr4 (49-239)||(25013406-25013587)
chr4 (99-238)||(21486476-21486615)
chr4 (80-237)||(29966378-29966523)
chr4 (142-239)||(3860230-3860327)
chr4 (142-239)||(3868987-3869084)
chr4 (71-194)||(41470310-41470424)
chr4 (140-238)||(40487703-40487800)
chr4 (102-200)||(29469162-29469260)
chr4 (72-235)||(21306281-21306444)
chr4 (102-200)||(8084208-8084306)
chr4 (75-227)||(14334366-14334518)
chr4 (102-198)||(42937417-42937513)
chr4 (75-233)||(871776-871933)
chr4 (102-200)||(49501188-49501286)
chr4 (102-200)||(49507253-49507351)
chr4 (114-195)||(23671392-23671473)
chr4 (92-200)||(24966515-24966623)
chr4 (75-166)||(22479852-22479943)
chr4 (102-200)||(50517192-50517290)
chr4 (85-235)||(25842986-25843132)
chr4 (108-200)||(49834495-49834587)
chr4 (103-198)||(26491130-26491225)
chr4 (45-88)||(40487632-40487675)
chr4 (102-197)||(41725564-41725659)
chr4 (101-228)||(26955301-26955434)
chr4 (122-200)||(33138799-33138877)
chr4 (102-200)||(46286708-46286806)
chr4 (102-200)||(28484343-28484442)
chr4 (102-199)||(29510072-29510169)
chr4 (108-200)||(32322514-32322606)
chr4 (102-200)||(29855964-29856062)
chr4 (102-199)||(5441851-5441948)
chr4 (42-78)||(6487283-6487319)
chr4 (103-199)||(27768513-27768609)
chr4 (42-82)||(40162886-40162926)
chr4 (102-200)||(23987645-23987742)
chr4 (102-172)||(37828085-37828155)
chr4 (90-156)||(40317591-40317657)
chr4 (90-156)||(40327665-40327731)
chr4 (102-172)||(48261554-48261624)
chr4 (113-235)||(55165489-55165611)
chr4 (151-235)||(2326716-2326801)
chr4 (102-199)||(5800413-5800510)
chr4 (113-200)||(30967009-30967096)
chr4 (102-199)||(51321305-51321402)
chr4 (102-199)||(54341591-54341688)
chr4 (116-200)||(32889895-32889979)
chr4 (102-154)||(37916283-37916335)
[»] chr7 (49 HSPs)
chr7 (42-239)||(14732228-14732435)
chr7 (42-238)||(19594172-19594367)
chr7 (42-230)||(34656574-34656762)
chr7 (92-238)||(35313518-35313664)
chr7 (92-238)||(21024027-21024173)
chr7 (92-238)||(38910442-38910588)
chr7 (91-223)||(1254460-1254592)
chr7 (83-187)||(6268513-6268617)
chr7 (123-226)||(37392648-37392751)
chr7 (102-200)||(14741425-14741523)
chr7 (102-200)||(4639877-4639975)
chr7 (113-200)||(12740816-12740903)
chr7 (102-200)||(48136889-48136987)
chr7 (113-198)||(11735204-11735289)
chr7 (83-198)||(31174710-31174825)
chr7 (102-199)||(44256416-44256513)
chr7 (108-200)||(37972544-37972636)
chr7 (102-200)||(8675777-8675876)
chr7 (102-200)||(16709434-16709530)
chr7 (102-200)||(17683670-17683766)
chr7 (102-172)||(7993631-7993701)
chr7 (113-235)||(27148809-27148931)
chr7 (102-200)||(29585960-29586058)
chr7 (102-172)||(29893446-29893516)
chr7 (102-200)||(40460375-40460473)
chr7 (102-200)||(42610616-42610714)
chr7 (102-199)||(510093-510190)
chr7 (102-199)||(28342758-28342855)
chr7 (102-199)||(37328354-37328451)
chr7 (102-199)||(39784554-39784651)
chr7 (92-200)||(28034499-28034607)
chr7 (92-200)||(44121584-44121692)
chr7 (113-200)||(18838856-18838943)
chr7 (113-200)||(26201804-26201891)
chr7 (122-200)||(32884217-32884295)
chr7 (113-199)||(33497107-33497193)
chr7 (102-171)||(23017020-23017089)
chr7 (102-199)||(29614456-29614553)
chr7 (122-233)||(36415080-36415188)
chr7 (42-78)||(35313659-35313695)
chr7 (42-78)||(38910583-38910619)
chr7 (102-198)||(41827776-41827872)
chr7 (102-197)||(33891895-33891990)
chr7 (133-200)||(43172153-43172220)
chr7 (114-172)||(30823112-30823170)
chr7 (102-199)||(23101738-23101835)
chr7 (122-199)||(37915919-37915996)
chr7 (202-238)||(6213015-6213051)
chr7 (72-148)||(32701318-32701394)
[»] chr6 (24 HSPs)
chr6 (49-239)||(31996199-31996388)
chr6 (42-238)||(7835316-7835503)
chr6 (53-238)||(21199515-21199700)
chr6 (80-235)||(8779562-8779717)
chr6 (102-200)||(1463674-1463772)
chr6 (102-200)||(6788099-6788197)
chr6 (108-200)||(10113789-10113881)
chr6 (81-235)||(21010859-21011013)
chr6 (92-233)||(12028941-12029082)
chr6 (113-198)||(13461374-13461459)
chr6 (108-198)||(31975661-31975751)
chr6 (102-195)||(3000244-3000337)
chr6 (114-197)||(7497548-7497631)
chr6 (116-199)||(16438706-16438789)
chr6 (108-199)||(31535069-31535160)
chr6 (102-199)||(31067880-31067977)
chr6 (102-198)||(2606896-2606992)
chr6 (102-172)||(31896112-31896182)
chr6 (102-170)||(4200107-4200175)
chr6 (180-228)||(15381593-15381641)
chr6 (124-200)||(28900863-28900939)
chr6 (102-197)||(14262092-14262187)
chr6 (102-197)||(34758735-34758830)
chr6 (102-149)||(24194463-24194511)
[»] chr1 (48 HSPs)
chr1 (92-239)||(7798481-7798628)
chr1 (45-192)||(33886806-33886953)
chr1 (45-192)||(33957297-33957444)
chr1 (43-230)||(34019109-34019296)
chr1 (49-235)||(34751522-34751708)
chr1 (80-237)||(1108335-1108492)
chr1 (122-238)||(18954447-18954563)
chr1 (102-200)||(4005087-4005185)
chr1 (102-197)||(1243309-1243404)
chr1 (102-200)||(9192044-9192142)
chr1 (102-200)||(41353441-41353539)
chr1 (102-200)||(51106912-51107010)
chr1 (102-200)||(8147337-8147435)
chr1 (102-200)||(26757635-26757733)
chr1 (102-199)||(11579103-11579200)
chr1 (102-200)||(5494751-5494849)
chr1 (102-195)||(5209371-5209464)
chr1 (102-199)||(45273015-45273112)
chr1 (102-199)||(47371578-47371675)
chr1 (102-200)||(3583559-3583657)
chr1 (102-198)||(32760102-32760198)
chr1 (176-227)||(29027978-29028029)
chr1 (114-200)||(46328433-46328519)
chr1 (108-198)||(48966500-48966590)
chr1 (102-198)||(48177095-48177192)
chr1 (103-171)||(15927348-15927416)
chr1 (114-234)||(21248490-21248610)
chr1 (102-170)||(42304503-42304571)
chr1 (113-200)||(49971609-49971697)
chr1 (71-154)||(42638006-42638088)
chr1 (113-200)||(49231454-49231541)
chr1 (108-199)||(49236975-49237066)
chr1 (102-200)||(15834687-15834785)
chr1 (113-195)||(27257872-27257954)
chr1 (102-199)||(6313024-6313121)
chr1 (102-199)||(25612540-25612637)
chr1 (102-199)||(29396087-29396184)
chr1 (102-195)||(35177213-35177306)
chr1 (102-200)||(18798899-18798997)
chr1 (107-200)||(3593266-3593359)
chr1 (103-200)||(25253513-25253610)
chr1 (102-198)||(28403949-28404045)
chr1 (102-200)||(38535799-38535897)
chr1 (102-200)||(38558017-38558115)
chr1 (102-172)||(49453063-49453133)
chr1 (102-199)||(8140886-8140983)
chr1 (122-199)||(9322181-9322258)
chr1 (42-70)||(7798631-7798659)
[»] scaffold0246 (3 HSPs)
scaffold0246 (43-239)||(1327-1514)
scaffold0246 (140-238)||(25642-25739)
scaffold0246 (45-88)||(25571-25614)
[»] chr8 (30 HSPs)
chr8 (42-245)||(28317025-28317218)
chr8 (42-238)||(41252125-41252311)
chr8 (49-235)||(33177799-33177984)
chr8 (71-235)||(1527877-1528041)
chr8 (102-200)||(19484214-19484312)
chr8 (102-199)||(8029844-8029941)
chr8 (112-195)||(6388139-6388222)
chr8 (102-200)||(10294994-10295092)
chr8 (102-200)||(9288149-9288247)
chr8 (102-200)||(31625756-31625854)
chr8 (119-189)||(12522528-12522598)
chr8 (71-200)||(24067105-24067234)
chr8 (102-172)||(26856581-26856651)
chr8 (113-166)||(17234747-17234800)
chr8 (92-232)||(4871103-4871243)
chr8 (114-193)||(27878650-27878729)
chr8 (114-193)||(28018831-28018910)
chr8 (125-200)||(32497989-32498064)
chr8 (73-154)||(12522407-12522489)
chr8 (102-172)||(14781787-14781857)
chr8 (102-200)||(18305631-18305729)
chr8 (102-200)||(19717529-19717627)
chr8 (113-199)||(37131301-37131387)
chr8 (102-200)||(43166331-43166429)
chr8 (102-172)||(44725446-44725516)
chr8 (103-200)||(42305260-42305357)
chr8 (122-197)||(41393958-41394033)
chr8 (113-195)||(16364159-16364241)
chr8 (102-172)||(26620349-26620419)
chr8 (102-199)||(43308163-43308260)
[»] scaffold0421 (1 HSPs)
scaffold0421 (42-171)||(1727-1846)
[»] scaffold0433 (1 HSPs)
scaffold0433 (142-239)||(350-447)
[»] scaffold1128 (1 HSPs)
scaffold1128 (102-200)||(908-1006)
[»] scaffold0110 (1 HSPs)
scaffold0110 (108-200)||(39297-39389)
[»] scaffold0013 (1 HSPs)
scaffold0013 (102-199)||(89280-89377)
[»] scaffold1504 (1 HSPs)
scaffold1504 (93-200)||(1314-1421)
[»] scaffold0383 (1 HSPs)
scaffold0383 (92-171)||(16675-16754)
[»] scaffold0152 (2 HSPs)
scaffold0152 (92-171)||(20911-20990)
scaffold0152 (92-171)||(28811-28890)
[»] scaffold0543 (1 HSPs)
scaffold0543 (102-200)||(10972-11070)
[»] scaffold0042 (1 HSPs)
scaffold0042 (114-200)||(57732-57818)
[»] scaffold0573 (1 HSPs)
scaffold0573 (124-200)||(8855-8931)
[»] scaffold0347 (1 HSPs)
scaffold0347 (108-172)||(15137-15201)


Alignment Details
Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 42 - 238
Target Start/End: Original strand, 9818508 - 9818704
Alignment:
Q  42 ttcaaaggtaaactcggacgagtttactccgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcac 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9818508 ttcaaaggtaaactcggacgagtttactccgagtttacacgagtttaccgagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcac 9818607  T
Q  142 caaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaacagtg 238  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9818608 caaaaatcgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaacagtg 9818704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 42 - 236
Target Start/End: Original strand, 53645267 - 53645451
Alignment:
Q  42 ttcaaaggtaaactcggacgagtttactccgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcac 141  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||          |||||||||||||||||||||||||    
T  53645267 ttcaaaggtaaactcggacgagtttactccgagtttacacaagtttaccgagtttaacacgtgtt----------aactcgtcaaactttccgatttcac 53645356  T
Q  142 caaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaacag 236  Q
    ||||||| ||||||||||| ||||| | ||||| ||||||||||||||||| ||||| | |||||||||| ||||||||||||||| | ||||||    
T  53645357 caaaaactgagtttacctctgagtttatacgtttttgccacctaaaaacgttaactcagacgagtttacgagttaacactcgatttttagaacag 53645451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 71 - 238
Target Start/End: Complemental strand, 49293931 - 49293764
Alignment:
Q  71 cgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaaca 170  Q
    |||||||||||||||||||| | ||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||  | | | || | |    
T  49293931 cgagtttacacgagtttaccgaatttaacacgtgttaattcggtcaaactcgtcaaactttccgatttcaccaaaaatcgagtttattttcaaatttata 49293832  T
Q  171 cgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaacagtg 238  Q
    |||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||| || |||||||    
T  49293831 cgtttttgccacctaaaaacgtaaactcggacgagtttacgagttaacactcgatttatgaaacagtg 49293764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 71 - 229
Target Start/End: Complemental strand, 40064406 - 40064248
Alignment:
Q  71 cgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaaca 170  Q
    |||||||||||||||||||| ||||||||||||||| ||| ||||||| |||||||||||| ||||||||||||||||  | ||||||||| |||| |||    
T  40064406 cgagtttacacgagtttaccgagtttaacacgtgttaacttggtcaaattcgtcaaacttttcgatttcaccaaaaactaaatttacctccaagtttaca 40064307  T
Q  171 cgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgt 229  Q
    |||| ||||||||||||||||||||||||| ||| ||||||  ||||||||||||||||    
T  40064306 cgtttttgccacctaaaaacgtaaactcggacgaatttacgaattaacactcgatttgt 40064248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 92 - 232
Target Start/End: Complemental strand, 37832679 - 37832539
Alignment:
Q  92 agtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacg 191  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||  |||||| |||||| || ||||||| ||||||||||||||||    
T  37832679 agtttaacacgtgttaactcggtcaaactcgtcaaactttctgatttcaccaaaaactaagtttatctccgaatttacacgtttttgccacctaaaaacg 37832580  T
Q  192 taaactcgggcgagtttacgtgttaacactcgatttgtgga 232  Q
    ||||||||| |||||||||| |||||||||| |||| ||||    
T  37832579 taaactcggacgagtttacgagttaacactcaatttatgga 37832539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 73 - 235
Target Start/End: Complemental strand, 29690757 - 29690596
Alignment:
Q  73 agtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacg 172  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||| ||||||| |||||||| | |||| |||||| |||| ||     
T  29690757 agtttacacgagtttaccaagtttaacacgtgttaactcggtcaaactcgtcatacattctgatttca-caaaaaccaaatttatctccgaattaataca 29690659  T
Q  173 ttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaaca 235  Q
    || ||| ||||||||||||||||  |   ||| |||||| ||||||||||||||| |||||||    
T  29690658 tttttgacacctaaaaacgtaaatacaaacgaatttacgagttaacactcgatttatggaaca 29690596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 81 - 171
Target Start/End: Original strand, 47467394 - 47467484
Alignment:
Q  81 cgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacac 171  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||    
T  47467394 cgagtttaccaagtttaacacgtgttaactcggtcaaactcgtcaaaattttcgatttcaccaaaaaccgagtttaccttcgagttaacac 47467484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 8598756 - 8598658
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| ||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||| ||  |||||||| ||||||||||||    
T  8598756 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcgg 8598658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 92 - 239
Target Start/End: Complemental strand, 27261500 - 27261367
Alignment:
Q  92 agtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacg 191  Q
    ||||||||||||||| |||| |||||| |||||||||||||||||||||||||||| |||||||            ||||||| ||||||| |||||||     
T  27261500 agtttaacacgtgttaactcagtcaaattcgtcaaactttccgatttcaccaaaaatcgagttt------------acacgtttttgccacttaaaaac- 27261414  T
Q  192 taaactcgggcgagtttacgtgttaacactcgatttgtggaacagtgg 239  Q
     |||||||||| |||||||| |||||||||||||||||||||||||||    
T  27261413 -aaactcgggcaagtttacgagttaacactcgatttgtggaacagtgg 27261367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 81 - 235
Target Start/End: Original strand, 19386874 - 19387027
Alignment:
Q  81 cgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgcc 180  Q
    ||||||||| |||||||||||||||| |||||||||||||| ||| || |||| |||| | ||| ||  |||||||| ||||||||||||| || ||| |    
T  19386874 cgagtttacgaagtttaacacgtgttaactcggtcaaactc-tcagacattccaattttatcaataattgagtttacatccgagttaacacatttttgac 19386972  T
Q  181 acctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaaca 235  Q
    ||||||| |||||||||||   ||| ||| | |||||||||||||||||||||||    
T  19386973 acctaaatacgtaaactcgtatgagattatgagttaacactcgatttgtggaaca 19387027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 49296213 - 49296115
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| |||||||||||||||||||||||| |||||| |||| ||| |||||||||||||||||||||||||| ||  |||||||| ||||||||||||    
T  49296213 gtgttaactcggtcaaactcgtcaaacttttcgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcgg 49296115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 92 - 235
Target Start/End: Original strand, 30238489 - 30238633
Alignment:
Q  92 agtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgc-cacctaaaaac 190  Q
    ||||||||| ||||| | |||||||||||| |||||| || || |||  | ||||||| | |||||||||||||||||||||| || | |||||||||||    
T  30238489 agtttaacatgtgttaattcggtcaaactcatcaaacatttcgtttttcctaaaaaccaaatttacctccgagttaacacgttttttcgcacctaaaaac 30238588  T
Q  191 gtaaactcgggcgagtttacgtgttaacactcgatttgtggaaca 235  Q
    |||||||||   ||| ||||| |||||||||||||||||||||||    
T  30238589 gtaaactcgatagagattacgcgttaacactcgatttgtggaaca 30238633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 53836059 - 53835961
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| ||||||||||||||||||||||||||||||| |||| ||| | ||||||||||| |||||||||||| ||  |||||||| ||||||||||||    
T  53836059 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcaagtttacctccaagttaacacgtttttagcacctaaacacgtaaactcgg 53835961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 16155261 - 16155163
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| ||||||||||||||||||||| |||| |||| | ||||||||||||||||||| ||||||||||| | |||  ||||||||||||||| ||||    
T  16155261 gtgttaactcggtcaaactcgtcaaaccttccaattttatcaaaaaccgagtttacctcagagttaacacgattttggtacctaaaaacgtaaattcgg 16155163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 113 - 235
Target Start/End: Complemental strand, 7665677 - 7665555
Alignment:
Q  113 gtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgt 212  Q
    |||||||||||||||  ||||||||| |||||||| |||||||||||||||||||||||| | |||  | ||||||||||||||| ||   | |   ||     
T  7665677 gtcaaactcgtcaaatattccgattttaccaaaaatcgagtttacctccgagttaacacgattttggtagctaaaaacgtaaactaggtaaattcggcga 7665578  T
Q  213 gttaacactcgatttgtggaaca 235  Q
    |||||||||||||||||||||||    
T  7665577 gttaacactcgatttgtggaaca 7665555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 22489488 - 22489585
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||| |||||||||||||||| |||| ||||||||| |||| ||| ||||||||| || || |||||||||| ||| |||||||| |||||||||||    
T  22489488 gtgttaactcggtcaaactcgttaaaccttccgattttaccagaaatcgagtttacatctgatttaacacgtttttggcacctaaacacgtaaactcg 22489585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 108 - 200
Target Start/End: Original strand, 21386494 - 21386586
Alignment:
Q  108 actcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    |||||||||||||||||||||||| |||||| |||| ||| ||||||||||||  |||||||||| | |||  ||||||||| ||||||||||    
T  21386494 actcggtcaaactcgtcaaacttttcgattttaccagaaatcgagtttacctctaagttaacacgattttgatacctaaaaatgtaaactcgg 21386586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 4962735 - 4962832
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||| ||||||||||||||||||||| || |||||| ||   ||| ||||||||||||| |||||||||| | |||  |||||||||||||||||||    
T  4962735 gtgttaactcggtcaaactcgtcaaacctttcgattttacttgaaatcgagtttacctccaagttaacacgattttgatacctaaaaacgtaaactcg 4962832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 20833441 - 20833344
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||| |||| ||||||||||| |||| ||||||||| |||| |||| ||||||||||| ||||||||||| | ||   |||||||||||||||||||    
T  20833441 gtgttaactcagtcaaactcgttaaaccttccgattttaccagaaactgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcg 20833344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 81 - 200
Target Start/End: Complemental strand, 52810924 - 52810804
Alignment:
Q  81 cgagtttac-caagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgc 179  Q
    ||||||||| |||||||| |  ||||| |||| ||||||||||| |||| ||||||||| |||| || ||||||||||||| ||||||||||  | ||      
T  52810924 cgagtttacacaagtttaccgagtgttaactcagtcaaactcgttaaaccttccgattttaccagaacccgagtttacctcagagttaacacaatttttg 52810825  T
Q  180 cacctaaaaacgtaaactcgg 200  Q
     ||||||||||||||||||||    
T  52810824 tacctaaaaacgtaaactcgg 52810804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 113 - 200
Target Start/End: Complemental strand, 25049957 - 25049870
Alignment:
Q  113 gtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||||||| |||||| ||||||||| || | ||| |||||||||||||||||| ||||| | |||  ||||||||||||||||||||    
T  25049957 gtcaaactcatcaaacattccgattttactagaaatcgagtttacctccgagttgacacgattttggtacctaaaaacgtaaactcgg 25049870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 33693353 - 33693283
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacg 172  Q
    ||||| ||||||||||||||||||||| ||| ||||| |||| ||| ||||||||||||| ||||||||||    
T  33693353 gtgttaactcggtcaaactcgtcaaaccttctgattttaccagaaatcgagtttacctccaagttaacacg 33693283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 113 - 195
Target Start/End: Original strand, 52617639 - 52617721
Alignment:
Q  113 gtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaa 195  Q
    ||||||||||| |||| ||||||||| |||| |||||||||||||||| ||||||||||| | ||   |||||||||||||||    
T  52617639 gtcaaactcgttaaaccttccgattttaccagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaa 52617721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 199
Target Start/End: Complemental strand, 17946760 - 17946675
Alignment:
Q  114 tcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    |||||||||| |||| ||||||||| |||| |||||||||||||||| ||||||||| | | ||   |||||||||||||||||||    
T  17946760 tcaaactcgttaaaccttccgattttaccagaaaccgagtttacctcagagttaacatgatttttgtacctaaaaacgtaaactcg 17946675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 50902965 - 50903062
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||| |||| ||||||||||| |||| |||| |||| |||| |||||||||||||||| ||||||||||| | ||   || ||||||||||||||||    
T  50902965 gtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgagtttacctcagagttaacacgatttttgtacataaaaacgtaaactcg 50903062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 51737343 - 51737440
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||| |||| ||||||||||| |||| ||||||||| || | |||||||||||||||| ||||||||||| | ||   ||||||||| |||||||||    
T  51737343 gtgttaactcagtcaaactcgttaaaccttccgattttactagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaatgtaaactcg 51737440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 102 - 198
Target Start/End: Original strand, 7437575 - 7437671
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactc 198  Q
    ||||| ||||||||||||||  || || ||||||||| ||||||||||||||||| ||||| ||||||||| | |||  ||||||| | ||||||||    
T  7437575 gtgttaactcggtcaaactcaccataccttccgattttaccaaaaaccgagtttatctccgtgttaacacgattttggtacctaaacaagtaaactc 7437671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 134 - 226
Target Start/End: Original strand, 27994807 - 27994899
Alignment:
Q  134 gatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatt 226  Q
    ||||| |||||||| ||||||| | |||||||| ||| | | |||   |||||| |||||||||||||||||||||||| |||||||||||||    
T  27994807 gattttaccaaaaaacgagttttcgtccgagtttacatgattttggttcctaaacacgtaaactcgggcgagtttacgttttaacactcgatt 27994899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 199
Target Start/End: Complemental strand, 49458445 - 49458358
Alignment:
Q  112 ggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||||||||||||||| ||||||||| |||| ||| ||||||||| || ||||||||||  | |||  ||||||| |||||||||||    
T  49458445 ggtcaaactcgtcaaaccttccgattttaccagaaatcgagtttacttcagagttaacacaattttgatacctaaacacgtaaactcg 49458358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 133 - 235
Target Start/End: Original strand, 2118472 - 2118573
Alignment:
Q  133 cgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtgga 232  Q
    ||||||||| ||||| ||||||||||| |||||||||||||| ||  ||||| |||| ||| |||||| |||||||||  |||||||||  |||||| ||    
T  2118472 cgatttcacaaaaaatcgagtttaccttcgagttaacacgttttttgcacct-aaaatgtacactcggacgagtttactagttaacacttaatttgtaga 2118570  T
Q  233 aca 235  Q
    |||    
T  2118571 aca 2118573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 9031981 - 9032055
Alignment:
Q  161 cgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaaca 235  Q
    |||||||||||||| | |||||||||||| |||||||||| ||| |||||| ||||||| | ||||||| |||||    
T  9031981 cgagttaacacgttttggccacctaaaaatgtaaactcggacgaatttacgagttaacatttgatttgttgaaca 9032055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 23753045 - 23753143
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| |||| |||||||| || |||| |||| |||| |||||||||||| |||||||| ||||||||||| | ||   ||||||||| ||||||||||    
T  23753045 gtgttaactcagtcaaactggttaaaccttccaattttaccaaaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgg 23753143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 37455391 - 37455293
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| |||| ||||||||||| |||| |||| |||| |||| ||||||| |||||||| ||||||||||| | ||   |||||||||||||| |||||    
T  37455391 gtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaagctcgg 37455293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 39038623 - 39038565
Alignment:
Q  113 gtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacac 171  Q
    ||||||||||| |||| ||||||||| |||| |||||||||||||||| ||||||||||    
T  39038623 gtcaaactcgttaaaccttccgattttaccagaaaccgagtttacctcagagttaacac 39038565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 48379694 - 48379596
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| |||| ||||||||||| || | ||||||||| |||| ||| |||||||||||| || |||||||| | ||   ||||||||||||||||||||    
T  48379694 gtgttaactcagtcaaactcgttaagccttccgattttaccagaaatcgagtttacctcagaattaacacgatttttgtacctaaaaacgtaaactcgg 48379596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 50761756 - 50761854
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| |||| ||||||||||| |||| |||| ||||||||| ||| | | |||||||| ||||||||||| | ||   ||||||||||||||||||||    
T  50761756 gtgttaactcagtcaaactcgttaaaccttccaatttcaccagaaatctattttacctcagagttaacacgatttttgtacctaaaaacgtaaactcgg 50761854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 26107873 - 26107776
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||| |||| ||||||||||| |||| ||||||||  |||| ||| |||||||||||| ||||||||| | | ||   |||||||||||||||||||    
T  26107873 gtgttaactcagtcaaactcgttaaaccttccgattgtaccagaaatcgagtttacctcagagttaacatgatttttgtacctaaaaacgtaaactcg 26107776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 102 - 198
Target Start/End: Complemental strand, 18750187 - 18750091
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactc 198  Q
    ||||| |||| ||||||||||| || | |||| |||| |||| |||||||||||||||| ||||||||| | | ||   ||||||||||||||||||    
T  18750187 gtgttaactcagtcaaactcgttaagccttccaattttaccagaaaccgagtttacctcagagttaacatgatttttgtacctaaaaacgtaaactc 18750091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 78
Target Start/End: Complemental strand, 27261531 - 27261495
Alignment:
Q  42 ttcaaaggtaaactcggacgagtttactccgagttta 78  Q
    |||||||||||||||||||||||||||||||||||||    
T  27261531 ttcaaaggtaaactcggacgagtttactccgagttta 27261495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 31645917 - 31646015
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| |||| ||||||||| | |||| |||| |||| |||| ||||||| |||||||| ||||||||||| | ||   |||||||||||||| |||||    
T  31645917 gtgttaactcagtcaaactctttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaagctcgg 31646015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 172
Target Start/End: Original strand, 36673808 - 36673878
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacg 172  Q
    ||||| |||| ||||||||||| |||| |||| |||| |||| ||||||| |||||||| |||||||||||    
T  36673808 gtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacg 36673878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 199
Target Start/End: Complemental strand, 43173010 - 43172927
Alignment:
Q  116 aaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    |||||| |||||| || |||||| |||| ||| ||||||||||||||||| |||||| | |||  ||||||| || ||||||||    
T  43173010 aaactcttcaaacctttcgattttaccagaaatcgagtttacctccgagtcaacacgattttggtacctaaacacataaactcg 43172927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 40897675 - 40897605
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacg 172  Q
    ||||| |||| ||||||||||| |||| |||| |||| | || ||||||| |||||||| |||||||||||    
T  40897675 gtgttaactcagtcaaactcgttaaaccttccaattttatcagaaaccgattttacctcagagttaacacg 40897605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 200
Target Start/End: Complemental strand, 54629383 - 54629297
Alignment:
Q  114 tcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    |||||||||| |||| || || ||| | || ||| |||||||||||| ||||||||||| | ||   ||||||||||||||||||||    
T  54629383 tcaaactcgttaaacctttcgcttttatcagaaatcgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcgg 54629297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 171
Target Start/End: Original strand, 34483754 - 34483823
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacac 171  Q
    ||||| |||| ||||||||||| |||| |||  |||| |||| ||||||| |||||||| ||||||||||    
T  34483754 gtgttaactcagtcaaactcgttaaaccttcaaattttaccagaaaccgattttacctcagagttaacac 34483823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 162; Significance: 2e-86; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 42 - 235
Target Start/End: Complemental strand, 34909749 - 34909556
Alignment:
Q  42 ttcaaaggtaaactcggacgagtttactccgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcac 141  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  34909749 ttcaaaggtaaactcggacgagtttactccgagtttacacaagtttaccgagtttaacacgcgttcactcggtcaaactcctcaaactttccgatttcac 34909650  T
Q  142 caaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaaca 235  Q
    |||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  34909649 caaagaccgagtttacctccgaattaacacgtttttgccacctaaaaacgtaaactcgagcgagtttacgtgttaacactcgatttgtggaaca 34909556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 42 - 238
Target Start/End: Complemental strand, 25868938 - 25868760
Alignment:
Q  42 ttcaaaggtaaactcggacgagtttactccgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcac 141  Q
    |||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||         ||||||||||||    
T  25868938 ttcaaaggtaaactcggacgagtttactccgagtttacacgagttta---------acacgtgttcactcggtcaaact---------ttccgatttcac 25868857  T
Q  142 caaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaacagtg 238  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  25868856 caaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacataaactcgggcgagtttacgtgttaacactcgatttgtggaacagtg 25868760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 49 - 238
Target Start/End: Original strand, 33892802 - 33892982
Alignment:
Q  49 gtaaactcggacgagtttactccgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaac 148  Q
    ||||||||||||||||||||||||||||||||||||||         ||||||||||| ||||||||||||||||||||||||||||||||| ||||||     
T  33892802 gtaaactcggacgagtttactccgagtttacacgagtt---------taacacgtgttaactcggtcaaactcgtcaaactttccgatttcatcaaaaat 33892892  T
Q  149 cgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaacagtg 238  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |||  ||| ||||||||||||||||||||||||| |||||||    
T  33892893 cgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaattcgaacgaatttacgtgttaacactcgatttgtgcaacagtg 33892982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 94 - 238
Target Start/End: Original strand, 2675070 - 2675214
Alignment:
Q  94 tttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgta 193  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  2675070 tttaacacgtgttaactcggtcaaactcgtcaaacttttcgatttcaccaaaaatcgagtttacctccgagttaacacgtttttgccacctaaaaacgta 2675169  T
Q  194 aactcgggcgagtttacgtgttaacactcgatttgtggaacagtg 238  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||    
T  2675170 aactcgggcgagtttacgtattaacactcgatttgtgaaacagtg 2675214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 92 - 232
Target Start/End: Original strand, 21238753 - 21238893
Alignment:
Q  92 agtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacg 191  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  21238753 agtttaacatgtgttaactcggtcaaactcgtcaaactttccgattttaccaaaaaccgagtttacctccgagttaacacgtttttgccatctaaaaacg 21238852  T
Q  192 taaactcgggcgagtttacgtgttaacactcgatttgtgga 232  Q
    |||| |||| ||| |||||||||||||||||||||||||||    
T  21238853 taaaatcggacgaatttacgtgttaacactcgatttgtgga 21238893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 71 - 235
Target Start/End: Complemental strand, 19223138 - 19222987
Alignment:
Q  71 cgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaaca 170  Q
    ||||||||||||||||| || ||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||             ||    
T  19223138 cgagtttacacgagttttccgagtttaacacgtgttaactcggttacactcgtcaaactttccgatttcaccaaaaaccgagttt-------------ca 19223052  T
Q  171 cgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaaca 235  Q
    |||| |||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||    
T  19223051 cgtttttgccacctaaaaatgtaaactcgggcgagtttacgagttaacactcaatttgtggaaca 19222987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 7125169 - 7125267
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| ||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||| ||  |||||||| ||||||||||||    
T  7125169 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcgg 7125267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 92 - 229
Target Start/End: Original strand, 16497730 - 16497867
Alignment:
Q  92 agtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacg 191  Q
    |||||||||| |||| | ||||||||||||||||||| ||||||||||| |||||| |||||||| ||  || ||||||| || ||| ||||||||||||    
T  16497730 agtttaacacatgttaagtcggtcaaactcgtcaaacattccgatttcagcaaaaatcgagtttatctttgaattaacacatttttggcacctaaaaacg 16497829  T
Q  192 taaactcgggcgagtttacgtgttaacactcgatttgt 229  Q
    |||||||    ||||||||| |||||||||||||||||    
T  16497830 taaactcaaatgagtttacgagttaacactcgatttgt 16497867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 81 - 235
Target Start/End: Complemental strand, 16800846 - 16800693
Alignment:
Q  81 cgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgcc 180  Q
    |||||||||| ||||||||| ||||| | ||||||||||||||||||| |||  |||||||| ||||||||||| |||| | |||||| || || ||  |    
T  16800846 cgagtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcacc-aaaaccgagttcaccttcaagttaaaacatttttaac 16800748  T
Q  181 acctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaaca 235  Q
    ||||||||| |||||||||    |||||||| |||||||||| ||||||||||||    
T  16800747 acctaaaaatgtaaactcgaaaaagtttacgagttaacactccatttgtggaaca 16800693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 149 - 236
Target Start/End: Original strand, 24258534 - 24258621
Alignment:
Q  149 cgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaacag 236  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||| || ||||| |||| | ||||||||||||||| ||||||||    
T  24258534 cgagtttacctccgagtttacacgtttttgccacctaaaaacgtaaattcaggcgaatttaggagttaacactcgatttatggaacag 24258621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 92 - 230
Target Start/End: Complemental strand, 31913605 - 31913467
Alignment:
Q  92 agtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacg 191  Q
    |||||||||| |||| ||||| ||||| ||| | ||| || ||||||||||||||| ||||||||||||| ||||||||| || ||| || ||||||||     
T  31913605 agtttaacacatgttaactcgatcaaattcgacgaacatttcgatttcaccaaaaatcgagtttacctccaagttaacacatttttgacatctaaaaaca 31913506  T
Q  192 taaactcgggcgagtttacgtgttaacactcgatttgtg 230  Q
    |||| |||  ||| |||||| |||||||| |||||||||    
T  31913505 taaattcgaacgaatttacgagttaacacacgatttgtg 31913467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 102 - 195
Target Start/End: Original strand, 5651191 - 5651284
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaa 195  Q
    ||||| |||||||||||||||||||||||| | ||||||||| ||| |||||||||||||||||||||||| | |||  ||||||| |||||||    
T  5651191 gtgttaactcggtcaaactcgtcaaacttttcaatttcaccagaaatcgagtttacctccgagttaacacgattttggtacctaaacacgtaaa 5651284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 28623171 - 28623268
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||| |||||||||||||||||||||||| | |||| |||| ||| |||||||| ||||||||||||||||| ||  |||||||| |||||||||||    
T  28623171 gtgttaactcggtcaaactcgtcaaactttgcaattttaccagaaatcgagtttatctccgagttaacacgtttttagcacctaaacacgtaaactcg 28623268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 200
Target Start/End: Original strand, 4240133 - 4240220
Alignment:
Q  113 gtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||||||||| |||| ||||||||| |||| |||| ||||||||||| ||||||||||| | ||  |||||||||||||||||||||    
T  4240133 gtcaaactcgttaaaccttccgattttaccagaaacggagtttacctcagagttaacacgatttttgcacctaaaaacgtaaactcgg 4240220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 1460802 - 1460900
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| |||| ||||||||||| || | ||||||||| |||| |||||||||||||||| ||||||||||  | ||   ||||||||||||||||||||    
T  1460802 gtgttaactcagtcaaactcgttaagccttccgattttaccagaaaccgagtttacctctgagttaacacaatttttgtacctaaaaacgtaaactcgg 1460900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 198
Target Start/End: Original strand, 29716785 - 29716891
Alignment:
Q  92 agtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacg 191  Q
    |||||| || |||||||| || || |||||||||||| ||| ||||| |||| ||| | ||||||||| |||||||||||| | |||  |||||||||||    
T  29716785 agtttaccaagtgttcacccgatccaactcgtcaaaccttctgattttaccagaaatcaagtttaccttcgagttaacacgattttgatacctaaaaacg 29716884  T
Q  192 taaactc 198  Q
    |||||||    
T  29716885 taaactc 29716891  T

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Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 37798124 - 37798222
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| |||||||||||||||||||||||| |||||| |||| |||  ||||||||||  ||||||||||||| ||  ||  |||| ||||||||||||    
T  37798124 gtgttaactcggtcaaactcgtcaaacttttcgattttaccagaaattgagtttacctttgagttaacacgtttttaacagataaacacgtaaactcgg 37798222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 197
Target Start/End: Complemental strand, 5949657 - 5949562
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaact 197  Q
    ||||| |||| ||||||||||| |||| |||| |||| |||| ||||||| |||||||| ||||||||||| | ||   |||||||||||||||||    
T  5949657 gtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaact 5949562  T

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Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 113 - 199
Target Start/End: Original strand, 16548860 - 16548946
Alignment:
Q  113 gtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    |||||| ||||||||| || |||||| |||| |||  ||||||||||||||||| ||||| | |||  |||||||||||||||||||    
T  16548860 gtcaaattcgtcaaacatttcgattttaccagaaattgagtttacctccgagttgacacgattttggtacctaaaaacgtaaactcg 16548946  T

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Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 113 - 199
Target Start/End: Complemental strand, 29758791 - 29758706
Alignment:
Q  113 gtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    |||||||||||||||| ||||||||| |||| ||| | | | |||||||||||||||||| | |||  |||||||||||||||||||    
T  29758791 gtcaaactcgtcaaacattccgattt-accagaaatcaaatctacctccgagttaacacgattttgatacctaaaaacgtaaactcg 29758706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 37014400 - 37014302
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| |||||||||||||||| |||| || | |||| |||| ||||||| |||||||| ||||||||||| | ||   ||||||||| ||||||||||    
T  37014400 gtgttaactcggtcaaactcgttaaacctttcaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgg 37014302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 219
Target Start/End: Complemental strand, 3032415 - 3032287
Alignment:
Q  90 caagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaa 189  Q
    |||||||| || ||||| ||||| ||||||||| ||||| ||  ||||||| |||||| ||| |||||||||||| ||| ||| | ||| |||||| | |    
T  3032415 caagtttaccatgtgttaactcgctcaaactcg-caaacattatgatttcaacaaaaaacgattttacctccgagctaatacgattttgacacctacaga 3032317  T
Q  190 cgtaaactcgggcgagtttacgtgttaaca 219  Q
    ||||||||||  |||||||||  |||||||    
T  3032316 cgtaaactcgttcgagtttactagttaaca 3032287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 39852916 - 39852819
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||| |||| ||||||||||| |||| |||| |||| |||||||| ||| |||||||| ||||||||||| | ||   ||||||||| |||||||||    
T  39852916 gtgttaactccgtcaaactcgttaaaccttccaattttaccaaaaatcgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcg 39852819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 108 - 200
Target Start/End: Original strand, 4549920 - 4550012
Alignment:
Q  108 actcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    |||| ||||||||||| |||| |||| |||| |||| ||||||| |||||||| ||||||||||| | ||   ||||||| ||||||||||||    
T  4549920 actcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaacacgtaaactcgg 4550012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 198
Target Start/End: Original strand, 15286536 - 15286634
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaacc--gagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactc 198  Q
    ||||| |||| ||||||||||   ||||||||||||| ||||||||    ||||||| ||||||||| ||||| | ||| |||||||||||||||||||    
T  15286536 gtgttaactcagtcaaactcggtcaactttccgattttaccaaaaaaaaagagtttatctccgagtttacacgattttgacacctaaaaacgtaaactc 15286634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 199
Target Start/End: Complemental strand, 13926466 - 13926380
Alignment:
Q  113 gtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||||||| | |||| |||| |||| |||| ||||||| |||||||| ||||||||||| | ||   |||||||||||||||||||    
T  13926466 gtcaaactccttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaactcg 13926380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 160; Significance: 4e-85; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 42 - 233
Target Start/End: Complemental strand, 13898633 - 13898442
Alignment:
Q  42 ttcaaaggtaaactcggacgagtttactccgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcac 141  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13898633 ttcaaaggtaaactcggacgagtttactctgagtttacacgagtttaccgagtttaacacgtgttaactcggtcaaactcgtcaaactttccgatttcac 13898534  T
Q  142 caaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaa 233  Q
    |||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  13898533 caaaaatcgagtttacctccgagttaacacgtttttgccgcctaaaaacgtaaactcagacgagtttacgtgttaacactcgatttgtggaa 13898442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 42 - 233
Target Start/End: Complemental strand, 14039250 - 14039059
Alignment:
Q  42 ttcaaaggtaaactcggacgagtttactccgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcac 141  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  14039250 ttcaaaggtaaactcggacgagtttactctgagtttacacgagtttaccgagtttaacacgtgttaactcggtcaaactcgtcaaactttccgatttcac 14039151  T
Q  142 caaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaa 233  Q
    |||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  14039150 caaaaatcgagtttacctccgagttaacacgtttttgccgcctaaaaacgtaaactcagacgagtttacgtgttaacactcgatttgtggaa 14039059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 49 - 238
Target Start/End: Complemental strand, 19948688 - 19948499
Alignment:
Q  49 gtaaactcggacgagtttactccgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaac 148  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19948688 gtaaactcggacgagtttacttcgagtttacacgagtttaccgagtttaacacgtgttaactcggtcaaactcgtcaaactttccgatttcaccaaaaac 19948589  T
Q  149 cgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaacagtg 238  Q
     ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||    
T  19948588 tgagtttacctccgagttaacacgtttttgccacctaaaaatgtaaactcgggcgagtttacatgttaacactcgatttgtgaaacagtg 19948499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 42 - 238
Target Start/End: Complemental strand, 33263010 - 33262814
Alignment:
Q  42 ttcaaaggtaaactcggacgagtttactccgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcac 141  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||| |||| |||||||||||||||||||||||||||||    
T  33263010 ttcaaaggtaaactcggacgagtttactccgagtttacacgcgtttaccgagtttaccacgtgttaactcagtcaaactcgtcaaactttccgatttcac 33262911  T
Q  142 caaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaacagtg 238  Q
    |||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||  |||||||||| ||||| |||  |||| ||||||||||    
T  33262910 caaaaaccgagtttaccttcgagtttacacgtttttgccacctaaaaacgtaaactcgaacgagtttacgagttaatacttaatttatggaacagtg 33262814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 71 - 238
Target Start/End: Original strand, 38413427 - 38413594
Alignment:
Q  71 cgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaaca 170  Q
    |||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  38413427 cgagtttacacgagtttatcgagtttaacacgtgttaactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagtttaca 38413526  T
Q  171 cgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaacagtg 238  Q
    |||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||    
T  38413527 cgtttttgccacctaaaaacgtaaactcggacgagtttacgagttaacactcgatttatggaacagtg 38413594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 43 - 199
Target Start/End: Complemental strand, 3991929 - 3991773
Alignment:
Q  43 tcaaaggtaaactcggacgagtttactccgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcacc 142  Q
    ||||||||||| ||| ||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  3991929 tcaaaggtaaattcgaacgagtttactccgagtttacacaagtttaccgagtttaacacgtgttaactcggtcaaactcgtcaaacttttcgatttcacc 3991830  T
Q  143 aaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3991829 aaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactcg 3991773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 71 - 238
Target Start/End: Complemental strand, 41978965 - 41978798
Alignment:
Q  71 cgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaaca 170  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  41978965 cgagtttacacgagtttactgagtttaacacgtgttaactcggtcaaactcgtcaaactttccgatttcatcaaaaaccgagtttacctccgaattaaca 41978866  T
Q  171 cgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaacagtg 238  Q
     ||| ||||||||||||||||||||  |||| ||||||||| |||||||||| |||||||||| ||||    
T  41978865 tgtttttgccacctaaaaacgtaaagccgggtgagtttacgagttaacactcaatttgtggaagagtg 41978798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 12877805 - 12877652
Alignment:
Q  71 cgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaaca 170  Q
    |||||||||||||||||||| |||||||||| |||| |||||||||||||         ||||||||||| |||||||||||||||||||||||||||||    
T  12877805 cgagtttacacgagtttaccgagtttaacacatgttaactcggtcaaact---------ttccgatttcatcaaaaaccgagtttacctccgagttaaca 12877715  T
Q  171 cgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaa 233  Q
    |||| ||||||||||||||||||||||||| ||| |||||| ||||||||||||||| |||||    
T  12877714 cgtttttgccacctaaaaacgtaaactcggacgaatttacgagttaacactcgatttatggaa 12877652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 92 - 235
Target Start/End: Original strand, 11153344 - 11153487
Alignment:
Q  92 agtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacg 191  Q
    ||||||||||||||| ||||||||||||||| ||||| |  |||||| |||| |||||||||||||||||||||||||||| | |   ||||||||||||    
T  11153344 agtttaacacgtgttaactcggtcaaactcgccaaacatctcgattttaccagaaaccgagtttacctccgagttaacacgatttcagcacctaaaaacg 11153443  T
Q  192 taaactcgggcgagtttacgtgttaacactcgatttgtggaaca 235  Q
    |||| |||  |||||||||| |||||||||| ||||||||||||    
T  11153444 taaattcgtccgagtttacgagttaacactcaatttgtggaaca 11153487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 70 - 235
Target Start/End: Original strand, 43318733 - 43318886
Alignment:
Q  70 ccgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaac 169  Q
    ||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||       ||     ||||||||    
T  43318733 ccgagtttacacgagtttaccgagtttaacacatgttaactcggtcaaactcgtcaaactttccgattttaccaaaaa-------ta-----gagttaac 43318820  T
Q  170 acgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaaca 235  Q
    ||||| ||  ||| ||||||||||||||||  |||||| ||| |||||||||||||||||||||||    
T  43318821 acgtttttagcacataaaaacgtaaactcgaacgagttaacgagttaacactcgatttgtggaaca 43318886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 45161127 - 45161206
Alignment:
Q  92 agtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacac 171  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  45161127 agtttaacacgtgttaactcggtcgaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagtttacac 45161206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 18899932 - 18900030
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| ||||||||||||||||||||||||||||||| || | ||| |||||||||||||||||||||||||| ||  |||||||| ||||||||||||    
T  18899932 gtgttaactcggtcaaactcgtcaaactttccgattttactagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcgg 18900030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 35404323 - 35404420
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||  |||||||||| | | |  |||||||||||||||||||    
T  35404323 gtgttaactcggtcaaactcgtcaaactttccaattttaccaaaaaccgagtttacctctaagttaacacgatttcggtacctaaaaacgtaaactcg 35404420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 37810855 - 37810979
Alignment:
Q  70 ccgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaac 169  Q
    ||||||||||| |||||||   |||||||||||||||   |||||||||||| |||||| ||  |||||||||||||| | ||||||||||||| |||||    
T  37810855 ccgagtttacatgagtttattgagtttaacacgtgttagatcggtcaaactcatcaaacattatgatttcaccaaaaatcaagtttacctccgatttaac 37810954  T
Q  170 acgttcttgccacctaaaaacgtaa 194  Q
    ||||| ||| || ||||||||||||    
T  37810955 acgtttttggcatctaaaaacgtaa 37810979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 92 - 195
Target Start/End: Complemental strand, 24025955 - 24025852
Alignment:
Q  92 agtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacg 191  Q
    ||||||||||||||| |||| ||| || ||||||||| ||| ||||| ||||||||||||||||| |||| |||||||||||| ||| |||||||||||     
T  24025955 agtttaacacgtgttaactcagtccaattcgtcaaacattctgattttaccaaaaaccgagtttatctccaagttaacacgtttttgacacctaaaaact 24025856  T
Q  192 taaa 195  Q
    ||||    
T  24025855 taaa 24025852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 110 - 195
Target Start/End: Complemental strand, 15224319 - 15224234
Alignment:
Q  110 tcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaa 195  Q
    |||||||||||||||||||||| ||||||||||| ||| |||||||||||| ||||||||||| | |||  ||||||| |||||||    
T  15224319 tcggtcaaactcgtcaaacttttcgatttcaccagaaatcgagtttacctctgagttaacacgattttggtacctaaacacgtaaa 15224234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 228
Target Start/End: Complemental strand, 30850395 - 30850239
Alignment:
Q  71 cgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaaca 170  Q
    ||||||||| | | |||||| | |||||  |||||| ||||||||||||  ||||| ||||  ||||| |||||||| ||| |||||||||||||| | |    
T  30850395 cgagtttactcaattttaccgattttaagccgtgttaactcggtcaaaccggtcaa-ctttatgattttaccaaaaaacgaatttacctccgagtttata 30850297  T
Q  171 cgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttg 228  Q
    || | ||| ||||||||||||||||| | ||||||||||||| | || ||||||||||    
T  30850296 cgattttggcacctaaaaacgtaaacgcaggcgagtttacgtttcaatactcgatttg 30850239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 40829733 - 40829635
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| ||||||||||| ||||||||| || | |||| |||| |||||||||||||||||||||||||||| | |||  ||||||||| ||| ||||||    
T  40829733 gtgttaactcggtcaaattcgtcaaacctttctattttaccagaaaccgagtttacctccgagttaacacgattttgatacctaaaaatgtagactcgg 40829635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 195
Target Start/End: Original strand, 2308718 - 2308811
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaa 195  Q
    ||||| ||| ||||||||| ||||||||||  ||||| |||| ||||||| |||||||||||||||||||| | |||  || ||||||||||||    
T  2308718 gtgttaacttggtcaaacttgtcaaactttttgattttaccacaaaccgaatttacctccgagttaacacgattttggtacataaaaacgtaaa 2308811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 18177817 - 18177720
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||| |||| ||||||||||| ||||||||| |||| |||| ||||||| |||||||| ||||||||||| | ||   ||||||||| |||||||||    
T  18177817 gtgttaactctgtcaaactcgttaaactttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcg 18177720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 379476 - 379378
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| |||| ||||||||||| || | ||||||||| | |||||||||| |||||||| ||||||||||| | ||   ||||||||||||||| ||||    
T  379476 gtgttaactcagtcaaactcgttaagccttccgattttatcaaaaaccgaatttacctcagagttaacacgatttttgtacctaaaaacgtaaattcgg 379378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 10657976 - 10657878
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| |||| || |||||||| |||| |||| |||| |||||||| ||| |||||||| ||||||||||| | ||   ||||||||||||||||||||    
T  10657976 gtgttaactcagttaaactcgttaaaccttccaattttaccaaaaatcgattttacctcagagttaacacgatttttgtacctaaaaacgtaaactcgg 10657878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 113 - 199
Target Start/End: Complemental strand, 15926464 - 15926378
Alignment:
Q  113 gtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    |||||||||||||||| || |||||| |||| ||| |||||| ||||||||||| ||||| | |||  ||| |||||||||||||||    
T  15926464 gtcaaactcgtcaaacattgcgattttaccagaaatcgagttaacctccgagttgacacgattttggtaccaaaaaacgtaaactcg 15926378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 28739950 - 28740048
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| |||| ||||||||||| |||| |||| |||| |||| ||||||| |||||||| ||||||||||| | ||   |||||||||| |||||||||    
T  28739950 gtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacataaactcgg 28740048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 172
Target Start/End: Original strand, 18727652 - 18727721
Alignment:
Q  103 tgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacg 172  Q
    |||| ||||||| ||||||||||||||||  ||||| |||| ||  ||||||||||||||||||||||||    
T  18727652 tgttaactcggtgaaactcgtcaaactttttgattttaccagaattcgagtttacctccgagttaacacg 18727721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 102 - 198
Target Start/End: Complemental strand, 3575387 - 3575291
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactc 198  Q
    ||||| |||| ||||||||||| |||| |||| |||| |||| ||||||| |||||||| ||||||||| | | ||   ||||||||||||||||||    
T  3575387 gtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacatgatttttgtacctaaaaacgtaaactc 3575291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 200
Target Start/End: Original strand, 3858440 - 3858524
Alignment:
Q  116 aaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||||||||||| ||||||||| |||||||| ||||||||||| | |||| ||||  | ||| ||| |||||||||||| ||||    
T  3858440 aaactcgtcaaacattccgattttaccaaaaatcgagtttaccttcaagttgacacaattttgacacttaaaaacgtaaattcgg 3858524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 92 - 172
Target Start/End: Complemental strand, 26789341 - 26789261
Alignment:
Q  92 agtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacg 172  Q
    |||||| || ||||| |||| ||||||||||| |||| |||| |||| |||| ||||||| |||||||| |||||||||||    
T  26789341 agtttatcaagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacg 26789261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 200
Target Start/End: Complemental strand, 25288697 - 25288611
Alignment:
Q  114 tcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    |||||| ||| |||| ||||||||| || | |||||||||||||||| ||||||||||| | ||   ||||||||| ||||||||||    
T  25288697 tcaaacccgttaaaccttccgattttactagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgg 25288611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 157
Target Start/End: Complemental strand, 28545874 - 28545788
Alignment:
Q  71 cgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttac 157  Q
    ||||||||||| | |||||  ||||||||||||||| | || || ||| |||||||||||| | ||||||||| |||| ||||||||    
T  28545874 cgagtttacacaaatttacagagtttaacacgtgttaaatcagttaaattcgtcaaacttttctatttcaccacaaactgagtttac 28545788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 6224233 - 6224330
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||| |||| ||||||||||| |||| ||||||||| || | |||||||||| ||||  ||||||||||| | |    |||||||||||||||||||    
T  6224233 gtgttaactcagtcaaactcgttaaaccttccgattttactagaaaccgagttcacctaagagttaacacgatttgtgtacctaaaaacgtaaactcg 6224330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 7027449 - 7027352
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||| |||| ||||||||||| |||| || | |||| |||| ||||||| |||||||| ||||||||||| | ||   ||||||||| |||||||||    
T  7027449 gtgttaactcagtcaaactcgttaaacctttcaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcg 7027352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 28845131 - 28845034
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||| |||| ||||||||||| |||| |||| |||| | || ||||||| |||||||| ||||||||||| | ||   |||||||||| ||||||||    
T  28845131 gtgttaactcagtcaaactcgttaaaccttccaattttatcagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacataaactcg 28845034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 171
Target Start/End: Original strand, 38295722 - 38295791
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacac 171  Q
    ||||| ||||||||||||||||||||| ||| ||||| |||| ||||| | ||| ||||||| |||||||    
T  38295722 gtgttaactcggtcaaactcgtcaaaccttctgattttaccagaaaccaaattttcctccgaattaacac 38295791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 171
Target Start/End: Complemental strand, 43825386 - 43825317
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacac 171  Q
    ||||| |||| ||||||||||| |||| |||| |||| |||| ||||||| |||||||| ||||||||||    
T  43825386 gtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacac 43825317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 200
Target Start/End: Complemental strand, 33136184 - 33136064
Alignment:
Q  81 cgagtttac-caagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgc 179  Q
    ||||||||| |||||||| |  ||||| |||  |||||| |||| |||| ||||||||  |||| ||| |||||||||||| ||||||||||| | ||      
T  33136184 cgagtttacacaagtttaccgagtgttaacttagtcaaattcgttaaaccttccgattataccagaaatcgagtttacctcagagttaacacgatttttg 33136085  T
Q  180 cacctaaaaacgtaaactcgg 200  Q
     |||||||||| |||||||||    
T  33136084 tacctaaaaacataaactcgg 33136064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 171
Target Start/End: Complemental strand, 43079024 - 43078967
Alignment:
Q  114 tcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacac 171  Q
    |||||||||| |||| ||| ||||| | || |||||||||||||||| ||||||||||    
T  43079024 tcaaactcgttaaaccttcggattttaacagaaaccgagtttacctcagagttaacac 43078967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 171
Target Start/End: Original strand, 43304976 - 43305044
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacac 171  Q
    ||||| |||| |||||| |||||||||||||| ||||||| |  || ||||||||||| |||||||||||    
T  43304976 gtgttaactcagtcaaagtcgtcaaactttcctatttcactagtaatcgagtttacct-cgagttaacac 43305044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 70
Target Start/End: Original strand, 45161096 - 45161124
Alignment:
Q  42 ttcaaaggtaaactcggacgagtttactc 70  Q
    |||||||||||||||||||||||||||||    
T  45161096 ttcaaaggtaaactcggacgagtttactc 45161124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 158; Significance: 6e-84; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 42 - 239
Target Start/End: Original strand, 56423921 - 56424118
Alignment:
Q  42 ttcaaaggtaaactcggacgagtttactccgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcac 141  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||| ||| |||||||||| |||||||||||||||||||    
T  56423921 ttcaaaggtaaactcggacgagtttactccgagtttacatgagtttaccgagtttaacacatgttaacttggtcaaactcatcaaactttccgatttcac 56424020  T
Q  142 caaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaacagtgg 239  Q
     |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  56424021 taaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacattcgctttgtggaacagtgg 56424118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 73 - 233
Target Start/End: Complemental strand, 51967403 - 51967243
Alignment:
Q  73 agtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacg 172  Q
    |||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  51967403 agtttacacgagtttaccgaatttaacacgtgttaactcggtcaaactcgtcaaacttttcgatttcaccaaaaaccgagtttacctccgagttaacacg 51967304  T
Q  173 ttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaa 233  Q
    || ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  51967303 tttttgccacctaaaaacgtaaactcgaacgagtttacgtgttaacactcgatttgtggaa 51967243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 92 - 238
Target Start/End: Original strand, 6487314 - 6487460
Alignment:
Q  92 agtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacg 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  6487314 agtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaatcgagtttacctccgagttaacacgtttttgccacctaaaaacg 6487413  T
Q  192 taaactcgggcgagtttacgtgttaacactcgatttgtggaacagtg 238  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||    
T  6487414 taaactcgggcaagtttacgtgttaacactcgatttgtggatcagtg 6487460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 239 - 379
Target Start/End: Original strand, 32391104 - 32391244
Alignment:
Q  239 ggtccaaggatttgaccaactaattcaatgagttcaatctcactattcacttgcggaggcaccacttgaagctagagcaaaactaaaattgacaccgaag 338  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  32391104 ggtccaaggatttgaccaactaattcaatgagttcaatctcactattcacttgcggaggcgccacttgaagctagagcaaaactaaaattgacaccgaag 32391203  T
Q  339 aataattgaacctaagaccttaagaaaagcacactttaatg 379  Q
    || |||||||||||||| ||||||| |||||||||||||||    
T  32391204 aaaaattgaacctaagatcttaagagaagcacactttaatg 32391244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 42 - 235
Target Start/End: Original strand, 8563313 - 8563497
Alignment:
Q  42 ttcaaaggtaaactcggacgagtttactccgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcac 141  Q
    |||||| ||||||||||||||||||||||||||||||||||||||         ||||||||||| |||||||||||||||||||||||||||||||||     
T  8563313 ttcaaaagtaaactcggacgagtttactccgagtttacacgagtt---------taacacgtgttaactcggtcaaactcgtcaaactttccgatttcat 8563403  T
Q  142 caaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaaca 235  Q
    ||||||||||||||| ||||||||||||||||| ||| || ||||||||||||||||| ||||||||||  |||||||||||||||||||||||    
T  8563404 caaaaaccgagtttatctccgagttaacacgtttttgtcatctaaaaacgtaaactcgtgcgagtttacaagttaacactcgatttgtggaaca 8563497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 92 - 236
Target Start/End: Complemental strand, 9972880 - 9972736
Alignment:
Q  92 agtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacg 191  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||     
T  9972880 agtttaacacgtgttaactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagtttacacgtttttgccacctaaaaaca 9972781  T
Q  192 taaactcgggcgagtttacgtgttaacactcgatttgtggaacag 236  Q
    |||||||| |||| |||||| ||||| ||||||||||||||||||    
T  9972780 taaactcgagcgaatttacgagttaatactcgatttgtggaacag 9972736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 42 - 207
Target Start/End: Original strand, 23170677 - 23170842
Alignment:
Q  42 ttcaaaggtaaactcggacgagtttactccgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcac 141  Q
    |||||||||||| | |||||||||||||| ||||||||||||||||| | |||||||||| |||| |||||||||||||||||||||||| |||||||||    
T  23170677 ttcaaaggtaaatttggacgagtttactctgagtttacacgagtttatcgagtttaacacatgttaactcggtcaaactcgtcaaacttttcgatttcac 23170776  T
Q  142 caaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtt 207  Q
    ||||||||||  |||||||||| ||||||| || |||||||||||||||||||||| |||||||||    
T  23170777 caaaaaccgaaattacctccgaattaacacatttttgccacctaaaaacgtaaacttgggcgagtt 23170842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 98 - 239
Target Start/End: Complemental strand, 40162890 - 40162749
Alignment:
Q  98 acacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaact 197  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| || ||||||| ||||||||||||||||||||||    
T  40162890 acacgtgttaactcggtcaaactcgtcaaactttccgatttcaccgaaaaccgagtttatctccgaatttacacgtttttgccacctaaaaacgtaaact 40162791  T
Q  198 cgggcgagtttacgtgttaacactcgatttgtggaacagtgg 239  Q
    ||| |||||||||| |||||||||||||||||||||||||||    
T  40162790 cggacgagtttacgagttaacactcgatttgtggaacagtgg 40162749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 82 - 238
Target Start/End: Complemental strand, 26448748 - 26448592
Alignment:
Q  82 gagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgcca 181  Q
    ||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||| ||| ||||||    
T  26448748 gagtttaccgagtttaacgcgtgttaactcggtcaaactcgtcaaactttccgatttcaccaaaaattaagtttacctccgagtttacatgtttttgcca 26448649  T
Q  182 cctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaacagtg 238  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  26448648 cctaaaaatgtaaactcgagcgagtttacgagttaacactcgatttgtggaacagtg 26448592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 71 - 207
Target Start/End: Complemental strand, 54561347 - 54561211
Alignment:
Q  71 cgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaaca 170  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||    
T  54561347 cgagtttacacgagtttaccgagtttaacacgtgttaactcggtcaaacacgtcaaactttccgatttcaccaaaaaccgagtttacctccgagtttaca 54561248  T
Q  171 cgttcttgccacctaaaaacgtaaactcgggcgagtt 207  Q
     ||| |||||||||||||| |||||||||||||||||    
T  54561247 tgtttttgccacctaaaaatgtaaactcgggcgagtt 54561211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 49 - 239
Target Start/End: Complemental strand, 25013587 - 25013406
Alignment:
Q  49 gtaaactcggacgagtttactccgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaac 148  Q
    ||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||| |     | | |    ||||||||||||||||||  |||||     
T  25013587 gtaaactcaaacgagtttactccgagtttacacgagtttaccgagtttaacacgtgttaa-----taata----tcaaactttccgatttcattaaaaat 25013497  T
Q  149 cgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaacagtgg 239  Q
     ||||||| ||||||||||||| ||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  25013496 tgagtttagctccgagttaacatgtttttgccacctaaaaacgtaaactcgaacgagtttacgtgttaacactcgatttgtggaacagtgg 25013406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 99 - 238
Target Start/End: Complemental strand, 21486615 - 21486476
Alignment:
Q  99 cacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactc 198  Q
    ||||||||  || ||||||||||||||||||||| |||||| ||||||||||||||||||| |||||| ||||| | |||||||||||||||||||||||    
T  21486615 cacgtgttacctaggtcaaactcgtcaaactttctgatttctccaaaaaccgagtttaccttcgagtttacacggttttgccacctaaaaacgtaaactc 21486516  T
Q  199 gggcgagtttacgtgttaacactcgatttgtggaacagtg 238  Q
    |  |||||||||| ||||||||||||||||||||||||||    
T  21486515 gaacgagtttacgagttaacactcgatttgtggaacagtg 21486476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 80 - 237
Target Start/End: Original strand, 29966378 - 29966523
Alignment:
Q  80 acgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgc 179  Q
    ||||||||||| |||||||||| |||| ||||||||||||||||| |||||| |||||||||||||||||||||||||            ||||| ||||    
T  29966378 acgagtttaccgagtttaacacatgttaactcggtcaaactcgtcgaacttttcgatttcaccaaaaaccgagtttac------------acgtttttgc 29966465  T
Q  180 cacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaacagt 237  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  29966466 cacctaaaaacgtaaactcgggcgagtttacgagttaacactcgatttgtggaacagt 29966523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 142 - 239
Target Start/End: Original strand, 3860230 - 3860327
Alignment:
Q  142 caaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaacagtgg 239  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||    
T  3860230 caaaaaccgagtttacctccgagttaacacgtttttgccacataaaaacgtaaactcgaacgagtttacgtgttaacactcgatttgtgaaacagtgg 3860327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 142 - 239
Target Start/End: Original strand, 3868987 - 3869084
Alignment:
Q  142 caaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaacagtgg 239  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||    
T  3868987 caaaaaccgagtttacctccgagttaacacgtttttgccacataaaaacgtaaactcgaacgagtttacgtgttaacactcgatttgtgaaacagtgg 3869084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 71 - 194
Target Start/End: Original strand, 41470310 - 41470424
Alignment:
Q  71 cgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaaca 170  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||         |||||||| ||||||||||||||||||||||||||||||||||||    
T  41470310 cgagtttacacgagtttaccgagtttaacacgtgttaactcggtca---------aactttccaatttcaccaaaaaccgagtttacctccgagttaaca 41470400  T
Q  171 cgttcttgccacctaaaaacgtaa 194  Q
    |||| |||||||||||||||||||    
T  41470401 cgtttttgccacctaaaaacgtaa 41470424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 40487703 - 40487800
Alignment:
Q  140 accaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaacagtg 238  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  | ||||||||| ||||||||||||||||||||||||||    
T  40487703 accaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactc-agagagtttacgagttaacactcgatttgtggaacagtg 40487800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 29469260 - 29469162
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| ||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||| ||  |||||||| ||||||||||||    
T  29469260 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcgg 29469162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 72 - 235
Target Start/End: Original strand, 21306281 - 21306444
Alignment:
Q  72 gagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacac 171  Q
    |||||||||||| |||||| ||||||||||||||| |||||  |||| ||||||||||||| |||||||| ||||  ||  ||||| || ||||||||||    
T  21306281 gagtttacacgactttaccgagtttaacacgtgttaactcgaccaaattcgtcaaactttctgatttcactaaaactcggatttacttctgagttaacac 21306380  T
Q  172 gttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaaca 235  Q
    ||| ||| |||||| ||| |||||||  | ||| |||||| |||||||||  ||||||||||||    
T  21306381 gtttttggcacctacaaatgtaaactacgacgaatttacgagttaacactttatttgtggaaca 21306444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 8084306 - 8084208
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| ||||||||||||||||||||||||||||||| || | ||| |||||||||||||||||||||||||| ||  |||||||| ||||||||||||    
T  8084306 gtgttaactcggtcaaactcgtcaaactttccgattttactagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcgg 8084208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 75 - 227
Target Start/End: Complemental strand, 14334518 - 14334366
Alignment:
Q  75 tttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgtt 174  Q
    ||||| ||| |||||||| ||||   |||||| ||||||||||||| |   ||||||||||||| |||||||| | ||||||| |||||||| || || |    
T  14334518 tttacccgattttaccaattttatgccgtgttaactcggtcaaactaggtcaactttccgattttaccaaaaaacaagtttacgtccgagtttacgcgat 14334419  T
Q  175 cttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgattt 227  Q
     |||  |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  14334418 tttggtacctaaaaacgtaaactcgggcaagtttacgttttaacactcgattt 14334366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 102 - 198
Target Start/End: Original strand, 42937417 - 42937513
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactc 198  Q
    ||||| |||||||||||||||||||||||| |||||| |||| ||| |||||||||||||||||||| ||| | ||  |||||||| ||||||||||    
T  42937417 gtgttaactcggtcaaactcgtcaaacttttcgattttaccagaaatcgagtttacctccgagttaaaacgcttttagcacctaaatacgtaaactc 42937513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 75 - 233
Target Start/End: Complemental strand, 871933 - 871776
Alignment:
Q  75 tttacacgagtttaccaagtttaacacgtgttcactcg-gtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgt 173  Q
    ||||| |||||||||||| ||| || || ||| ||||| |||||||||||||||| ||||||||| |||| ||| |||||||||||||||||| |||||     
T  871933 tttactcgagtttaccaaatttgac-cgagttaactcgagtcaaactcgtcaaacattccgattttaccagaaatcgagtttacctccgagttgacacga 871835  T
Q  174 tcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaa 233  Q
    | |||  ||||||||||||||||||||   | |  ||| ||||||||||||||| |||||    
T  871834 t-ttggtacctaaaaacgtaaactcggtaaactcgacgagttaacactcgatttatggaa 871776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 49501188 - 49501286
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| |||| ||||||||||| |||| ||||||||| |||| |||||||||||||||| ||||||||||| | ||   ||||||||||||||||||||    
T  49501188 gtgttaactccgtcaaactcgttaaaccttccgattttaccagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcgg 49501286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 49507253 - 49507351
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| |||| ||||||||||| |||| ||||||||| |||| |||||||||||||||| ||||||||||| | ||   ||||||||||||||||||||    
T  49507253 gtgttaactccgtcaaactcgttaaaccttccgattttaccagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcgg 49507351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 114 - 195
Target Start/End: Original strand, 23671392 - 23671473
Alignment:
Q  114 tcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaa 195  Q
    |||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||| | |||  ||||||| |||||||    
T  23671392 tcaaactcgtcaaacttttcgatttcaccagaaatcgagtttacctccgagttaacacgattttggtacctaaacacgtaaa 23671473  T

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Target: chr4; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 92 - 200
Target Start/End: Original strand, 24966515 - 24966623
Alignment:
Q  92 agtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacg 191  Q
    |||||| || ||||| ||| ||||||||||| ||||| |||| |||| |||||||||||| ||||| |||||||||||||| | |||  ||||||| |||    
T  24966515 agtttaccaagtgttaacttggtcaaactcggcaaaccttcccattttaccaaaaaccgaatttacttccgagttaacacgattttggtacctaaacacg 24966614  T
Q  192 taaactcgg 200  Q
    |||||||||    
T  24966615 taaactcgg 24966623  T

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Target: chr4; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 166
Target Start/End: Complemental strand, 22479943 - 22479852
Alignment:
Q  75 tttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagtt 166  Q
    ||||| ||||||||||||||||| ||| |||| ||||| ||||||| ||||||| ||||||||||| |||||| ||| ||||| ||||||||    
T  22479943 tttacccgagtttaccaagtttaccacatgttaactcgctcaaacttgtcaaacattccgatttcaacaaaaaacgattttacatccgagtt 22479852  T

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Target: chr4; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 50517290 - 50517192
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| ||||||||||||||||||||| |||| |||| |||| ||| ||||||||||||  |||||||||| | |||  ||||||| ||||||||||||    
T  50517290 gtgttaactcggtcaaactcgtcaaaccttccaattttaccagaaatcgagtttacctcaaagttaacacgattttggtacctaaacacgtaaactcgg 50517192  T

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Target: chr4; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 85 - 235
Target Start/End: Original strand, 25842986 - 25843132
Alignment:
Q  85 tttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacct 184  Q
    ||||||||||||||||  |||| |||||||||| ||| |||||||||| |||||||||| ||||||| |||||     |||||||| ||| ||||||| |    
T  25842986 tttaccaagtttaacatatgttaactcggtcaatctcttcaaactttctgatttcaccataaaccgaatttaca----agttaacatgtttttgccacgt 25843081  T
Q  185 aaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaaca 235  Q
    ||||   |||| |||| |||||||||   |||| |||||||||||| ||||    
T  25843082 aaaagtataaattcggacgagtttacaaattaatactcgatttgtgaaaca 25843132  T

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Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 108 - 200
Target Start/End: Original strand, 49834495 - 49834587
Alignment:
Q  108 actcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    |||| ||||||||||| |||| ||||||||| |||| |||||||||||||||| ||||||||||| | ||   | ||||||||||||||||||    
T  49834495 actcagtcaaactcgttaaaccttccgattttaccagaaaccgagtttacctcagagttaacacgatttttgtagctaaaaacgtaaactcgg 49834587  T

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Target: chr4; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 103 - 198
Target Start/End: Original strand, 26491130 - 26491225
Alignment:
Q  103 tgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactc 198  Q
    |||| ||||||||||||||||||||| ||| ||||| |||| ||||||||||||||||  | |||||||| | |||  ||||||| ||||||||||    
T  26491130 tgttaactcggtcaaactcgtcaaaccttctgattttaccagaaaccgagtttacctcaaatttaacacgattttggtacctaaacacgtaaactc 26491225  T

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Target: chr4; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 40487632 - 40487675
Alignment:
Q  45 aaaggtaaactcggacgagtttactccgagtttacacgagttta 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  40487632 aaaggtaaactcggacgagtttactccgagtttacacgagttta 40487675  T

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Target: chr4; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 102 - 197
Target Start/End: Complemental strand, 41725659 - 41725564
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaact 197  Q
    ||||| |||| ||||||||||| |||| ||||||||| |||| ||| |||||||||||| ||||||||||| | ||   |||||||||||||||||    
T  41725659 gtgttaactcagtcaaactcgttaaaccttccgattttaccagaaatcgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaact 41725564  T

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Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 101 - 228
Target Start/End: Complemental strand, 26955434 - 26955301
Alignment:
Q  101 cgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaac------cgagtttacctccgagttaacacgttcttgccacctaaaaacgtaa 194  Q
    |||||| ||||||||||||||| |||||||| |||||| ||||||||       ||| |||||||  || || ||||| | |||  ||||||||||||||    
T  26955434 cgtgttaactcggtcaaactcgacaaacttttcgattttaccaaaaaaaaaaaacgaatttacctttgaatttacacgattttgaaacctaaaaacgtaa 26955335  T
Q  195 actcgggcgagtttacgtgttaacactcgatttg 228  Q
    | |||||| ||||||||| |||||||||||||||    
T  26955334 attcgggcaagtttacgttttaacactcgatttg 26955301  T

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Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 200
Target Start/End: Complemental strand, 33138877 - 33138799
Alignment:
Q  122 gtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||||| ||||||||| |||| ||| |||||||||||||||||||||||| | |||  ||||||| ||||||||||||    
T  33138877 gtcaaaccttccgattttaccagaaatcgagtttacctccgagttaacacgattttggtacctaaacacgtaaactcgg 33138799  T

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Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 46286806 - 46286708
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| ||||||||||||||||||||| |||||| || || | ||| |||||||||||  | ||||||||| | |||  ||||||||||||||||||||    
T  46286806 gtgttaactcggtcaaactcgtcaaaccttccgagtttactagaaatcgagtttaccttagtgttaacacgattttggtacctaaaaacgtaaactcgg 46286708  T

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Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 28484442 - 28484343
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacg--ttcttgccacctaaaaacgtaaactcg 199  Q
    ||||| |||| ||||||||||| |||| |||| |||| |||| |||||||||||||||| |||||||||||  || |||  |||||||||||||||||||    
T  28484442 gtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgagtttacctcagagttaacacgactttttg-tacctaaaaacgtaaactcg 28484344  T

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Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 29510072 - 29510169
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||| ||||||||||||||||||||| ||| ||||| |||| |||  |||||||| || ||||||||||| | |||  ||||||| |||||||||||    
T  29510072 gtgttaactcggtcaaactcgtcaaaccttctgattttaccagaaattgagtttacatcagagttaacacgattttgatacctaaacacgtaaactcg 29510169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 108 - 200
Target Start/End: Complemental strand, 32322606 - 32322514
Alignment:
Q  108 actcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    |||| ||||||||||| || | ||||||||| |||| |||||||||||||||| || |||||||| | ||   ||||||||||||||||||||    
T  32322606 actcagtcaaactcgttaagccttccgattttaccagaaaccgagtttacctcagaattaacacgatttttgtacctaaaaacgtaaactcgg 32322514  T

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Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 29856062 - 29855964
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| |||| ||||||||||| |||| |||| |||| |||| ||| |||||||||||| ||||||||||| | ||   || |||||||||||||||||    
T  29856062 gtgttaactcagtcaaactcgttaaaccttccaattttaccagaaatcgagtttacctcagagttaacacgatttttgtacataaaaacgtaaactcgg 29855964  T

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Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 5441948 - 5441851
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||| |||| ||||||||||| |||| |||| |||| |||| ||||||| |||||||| ||||||||||| | ||   ||||||||| |||||||||    
T  5441948 gtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcg 5441851  T

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Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 6487283 - 6487319
Alignment:
Q  42 ttcaaaggtaaactcggacgagtttactccgagttta 78  Q
    |||||||||||||||||||||||||||||||||||||    
T  6487283 ttcaaaggtaaactcggacgagtttactccgagttta 6487319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 103 - 199
Target Start/End: Complemental strand, 27768609 - 27768513
Alignment:
Q  103 tgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    |||| |||| ||||||||||| |||| |||| |||| |||| ||||||| |||||||| ||||||||||| | ||   ||||||||| |||||||||    
T  27768609 tgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcg 27768513  T

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Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 40162926 - 40162886
Alignment:
Q  42 ttcaaaggtaaactcggacgagtttactccgagtttacacg 82  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  40162926 ttcaaaggtaaactcggactagtttactccgagtttacacg 40162886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 23987742 - 23987645
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| |||| ||||||||||| |||| |||| |||| |||| ||||| | |||||||| ||||||||||| | ||   ||||||||||||||||||||    
T  23987742 gtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccaa-tttacctcagagttaacacgatttttgtacctaaaaacgtaaactcgg 23987645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 172
Target Start/End: Original strand, 37828085 - 37828155
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacg 172  Q
    ||||| |||| ||||||||||| |||| |||| |||| |||| ||||||| |||||||| |||||||||||    
T  37828085 gtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacg 37828155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 40317591 - 40317657
Alignment:
Q  90 caagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagttta 156  Q
    ||||||||||| ||||| ||| | ||||||| ||||||| ||| ||||||| |||||||||||||||    
T  40317591 caagtttaacatgtgttaactagatcaaactagtcaaacgttctgatttcatcaaaaaccgagttta 40317657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 40327665 - 40327731
Alignment:
Q  90 caagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagttta 156  Q
    ||||||||||| ||||| ||| | ||||||| ||||||| ||| ||||||| |||||||||||||||    
T  40327665 caagtttaacatgtgttaactagatcaaactagtcaaacgttctgatttcatcaaaaaccgagttta 40327731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 48261624 - 48261554
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacg 172  Q
    ||||| |||| ||||||||||| |||| |||| |||| |||| ||||||| |||||||| |||||||||||    
T  48261624 gtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacg 48261554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 235
Target Start/End: Complemental strand, 55165611 - 55165489
Alignment:
Q  113 gtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgt 212  Q
    |||||||||||||||| ||| ||||| |||| ||| | ||||||||||| |||||| ||| | |||  || ||||||||||||||| |   | |  |||     
T  55165611 gtcaaactcgtcaaacattctgattttaccataaatcaagtttacctccaagttaatacgattttggtacgtaaaaacgtaaactcagtaaactcgacga 55165512  T
Q  213 gttaacactcgatttgtggaaca 235  Q
    |||| ||||||||||||||||||    
T  55165511 gttagcactcgatttgtggaaca 55165489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 151 - 235
Target Start/End: Original strand, 2326716 - 2326801
Alignment:
Q  151 agtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactc-gatttgtggaaca 235  Q
    ||||||| ||| |||| ||||| | |||  ||||||||||||||| || ||||||||||||| ||||||||| |||||||| ||||    
T  2326716 agtttacatccaagtttacacgattttggtacctaaaaacgtaaattcaggcgagtttacgttttaacactcggatttgtgaaaca 2326801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 5800510 - 5800413
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||| |||| ||||||||||| |||| ||| ||| | |||| ||||||| |||||||| ||||||||||| | ||   ||||||||| |||||||||    
T  5800510 gtgttaactcagtcaaactcgttaaaccttctgatgttaccagaaaccgaatttacctcagagttaacacgatttttgtacctaaaaatgtaaactcg 5800413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 113 - 200
Target Start/End: Original strand, 30967009 - 30967096
Alignment:
Q  113 gtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||||||||| |||| |||| |||| |||| ||||| | |||| ||| ||||||||||| | ||   ||||||||||||||||||||    
T  30967009 gtcaaactcgttaaaccttccaattttaccagaaaccaattttatctcagagttaacacgatttttgtacctaaaaacgtaaactcgg 30967096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 51321402 - 51321305
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||| |||| |||||||| || |||| |||| |||| |||| ||||||| ||||| || ||||||||||| | ||   ||||||||| |||||||||    
T  51321402 gtgttaactcagtcaaactggttaaaccttccaattttaccagaaaccgattttacgtcagagttaacacgatttttgtacctaaaaatgtaaactcg 51321305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 54341688 - 54341591
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||| |||| ||||||||||| |||| || | |||| |||| ||||||| |||||||| ||||| ||||| | ||   ||||||||| |||||||||    
T  54341688 gtgttaactcagtcaaactcgttaaacctttcaattttaccagaaaccgattttacctcagagtttacacgatttttgtacctaaaaatgtaaactcg 54341591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 200
Target Start/End: Complemental strand, 32889979 - 32889895
Alignment:
Q  116 aaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||||||||||| ||| ||||| |||| |||  |||||||| ||  |||||||||| | |||  ||||||| ||||||||||||    
T  32889979 aaactcgtcaaaccttctgattttaccagaaattgagtttacatcaaagttaacacgattttggtacctaaacacgtaaactcgg 32889895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 37916335 - 37916283
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtt 154  Q
    ||||| |||| ||||||||||| |||| ||||||||| |||| ||||||||||    
T  37916335 gtgttaactcagtcaaactcgttaaaccttccgattttaccagaaaccgagtt 37916283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 153; Significance: 5e-81; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 42 - 239
Target Start/End: Original strand, 14732228 - 14732435
Alignment:
Q  42 ttcaaaggtaaactcggacgagtttactccgag----------tttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaacttt 131  Q
    |||||||||||||||||||||||||||||||||          |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  14732228 ttcaaaggtaaactcggacgagtttactccgagtttacacgagtttacacgagtttaccgagtttaacacgtgttcactcggtcaaactcgtcaaacttt 14732327  T
Q  132 ccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtgg 231  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  14732328 ccgatttcaccaaaaaccaagtttacctccgagttaacacgtttttgccacctaaaaacgtaaacttgagcgagtttacgtgttaacactcgatttgtgg 14732427  T
Q  232 aacagtgg 239  Q
    ||||||||    
T  14732428 aacagtgg 14732435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 42 - 238
Target Start/End: Complemental strand, 19594367 - 19594172
Alignment:
Q  42 ttcaaaggtaaactcggacgagtttactccgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcac 141  Q
    |||||| |||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  19594367 ttcaaaagtaaactcggacaagtttactccgagtttacacaagtttaccgagtttaacacgtgttaactcggtcaaactcgtcaaactttccgatttcac 19594268  T
Q  142 caaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaacagtg 238  Q
    ||||||||||||||| |||| |||| ||||||| |||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  19594267 caaaaaccgagtttatctcctagtttacacgtt-ttgccatctaaaaacgtaaactcgggcgagtttacgagttaaaactcgatttgtggaacagtg 19594172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 42 - 230
Target Start/End: Complemental strand, 34656762 - 34656574
Alignment:
Q  42 ttcaaaggtaaactcggacgagtttactccgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcac 141  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  34656762 ttcaaaggtaaacttggacgagtttactccaagtttacacgagtttaccgagtttaacacgtgttaactcggtcaaactcgtcaaacttttcgatttcac 34656663  T
Q  142 caaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtg 230  Q
    |||||||||| ||||| ||||| || ||||||| || |||||||||||||||||||||| |||||  ||| ||||||||||||||||||    
T  34656662 caaaaaccgaatttacttccgaatttacacgtttttaccacctaaaaacgtaaactcggacgagtacacgagttaacactcgatttgtg 34656574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 92 - 238
Target Start/End: Complemental strand, 35313664 - 35313518
Alignment:
Q  92 agtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacg 191  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| | |||||| |||||||||    
T  35313664 agtttaacacgtgttaactcggtcaaactcatcaaactttccgatttcaccaaaaaccgaatttacctccgagttaacacggttttgccatctaaaaacg 35313565  T
Q  192 taaactcgggcgagtttacgtgttaacactcgatttgtggaacagtg 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  35313564 taaactcgggcgagtttacgtgttaacactcgatttgtggaacagtg 35313518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 92 - 238
Target Start/End: Complemental strand, 21024173 - 21024027
Alignment:
Q  92 agtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacg 191  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||| ||    
T  21024173 agtttaacacgtgttaactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttaccttcgagttaacacgtttttgtcacctaaaatcg 21024074  T
Q  192 taaactcgggcgagtttacgtgttaacactcgatttgtggaacagtg 238  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||    
T  21024073 taaactcgggcgaatttacgtgttaacactcgatttgtgaaacagtg 21024027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 92 - 238
Target Start/End: Complemental strand, 38910588 - 38910442
Alignment:
Q  92 agtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacg 191  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||| |||||||||    
T  38910588 agtttaacacgtgttaactcggtcaatctcgtcaaactttccgatttcaccaaaaaccgagcttaccttcgagtttacacgttcttgccatctaaaaacg 38910489  T
Q  192 taaactcgggcgagtttacgtgttaacactcgatttgtggaacagtg 238  Q
    |||| ||||| ||  ||||| ||||||||| ||||||||||||||||    
T  38910488 taaattcgggtgaacttacgagttaacacttgatttgtggaacagtg 38910442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 91 - 223
Target Start/End: Original strand, 1254460 - 1254592
Alignment:
Q  91 aagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaac 190  Q
    |||||||||||||||| |||||||||||||| ||||||  ||||||||||||||||| ||||||||||| ||| |||| |  || ||| ||||||||| |    
T  1254460 aagtttaacacgtgttaactcggtcaaactcatcaaacagtccgatttcaccaaaaatcgagtttaccttcgatttaaaaaatttttgacacctaaaatc 1254559  T
Q  191 gtaaactcgggcgagtttacgtgttaacactcg 223  Q
    |||||||| |||||||||||| |||||| ||||    
T  1254560 gtaaactcaggcgagtttacgagttaactctcg 1254592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 83 - 187
Target Start/End: Complemental strand, 6268617 - 6268513
Alignment:
Q  83 agtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccac 182  Q
    |||| ||||| ||||||||||||| ||||||||||||||||||||| |||  ||||||||||||||| ||||||| |||||||||||||||| ||| |||    
T  6268617 agttgaccaaatttaacacgtgttaactcggtcaaactcgtcaaacattctaatttcaccaaaaacctagtttacatccgagttaacacgtttttgacac 6268518  T
Q  183 ctaaa 187  Q
    |||||    
T  6268517 ctaaa 6268513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 37392648 - 37392751
Alignment:
Q  123 tcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactc 222  Q
    |||||||||| |||||||||||||| | |||||| ||||||||| ||| ||| ||||||||||||||||||||||||| ||| |||||| ||||||||||    
T  37392648 tcaaactttctgatttcaccaaaaatcaagtttatctccgagtttacatgtttttgccacctaaaaacgtaaactcggacgaatttacgagttaacactc 37392747  T
Q  223 gatt 226  Q
    ||||    
T  37392748 gatt 37392751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 14741523 - 14741425
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| ||||||||||||||||||||||||||||||| || | ||| |||||||||||||||||||||||||| ||  |||||||| ||||||||||||    
T  14741523 gtgttaactcggtcaaactcgtcaaactttccgattttactagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcgg 14741425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 4639877 - 4639975
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| |||||||||||||||||||| |||||||||| |||| |||  ||||||||||||||||||||||||| ||  |||||||| ||||||||||||    
T  4639877 gtgttaactcggtcaaactcgtcaaaatttccgattttaccagaaatagagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcgg 4639975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 200
Target Start/End: Complemental strand, 12740903 - 12740816
Alignment:
Q  113 gtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    |||||||||||||||| |||| |||| |||| | |||||||||||||| ||||||||||| | |||  ||||||||||||||||||||    
T  12740903 gtcaaactcgtcaaaccttccaattttaccagacaccgagtttacctcagagttaacacgattttggtacctaaaaacgtaaactcgg 12740816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 48136889 - 48136987
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| |||| |||||||||||||||| |||  |||| |||| |||| ||||||||||| ||||||||||| | |||  ||||||||||||||||||||    
T  48136889 gtgttaactcagtcaaactcgtcaaaccttctaattttaccagaaactgagtttacctcagagttaacacgattttggtacctaaaaacgtaaactcgg 48136987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 113 - 198
Target Start/End: Original strand, 11735204 - 11735289
Alignment:
Q  113 gtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactc 198  Q
    |||||||||| ||||| ||||||||| |||| ||| |||||||||||||||||||||||| | |||  |||||||| |||||||||    
T  11735204 gtcaaactcggcaaacattccgattttaccagaaatcgagtttacctccgagttaacacgattttgggacctaaaatcgtaaactc 11735289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 83 - 198
Target Start/End: Complemental strand, 31174825 - 31174710
Alignment:
Q  83 agtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccac 182  Q
    |||||| |||||||| |||||||| ||||  ||||||||||||||| ||| ||||| | |||||| | | ||||||||||| |||||| | | ||| |||    
T  31174825 agtttatcaagtttaccacgtgttaactcactcaaactcgtcaaacattctgatttgaacaaaaaactattttacctccgatttaacatgattttgacac 31174726  T
Q  183 ctaaaaacgtaaactc 198  Q
    ||||||| ||||||||    
T  31174725 ctaaaaatgtaaactc 31174710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 44256416 - 44256513
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||| |||| ||||||||||| |||| ||||||||| |||| ||| |||||||||||| ||||||||||| | ||   | |||||||||||||||||    
T  44256416 gtgttaactcagtcaaactcgttaaaccttccgattttaccagaaatcgagtttacctcagagttaacacgatttttgtatctaaaaacgtaaactcg 44256513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 108 - 200
Target Start/End: Original strand, 37972544 - 37972636
Alignment:
Q  108 actcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    |||| |||||| |||| |||| ||||||||| |||| |||| ||||||| ||| ||||||||||| | |||  ||||||||||||||||||||    
T  37972544 actcagtcaaattcgttaaaccttccgattttaccagaaactgagtttatctcagagttaacacgattttggtacctaaaaacgtaaactcgg 37972636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 8675876 - 8675777
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttc-accaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| |||| |||||||||||||||| || ||||||  |||| |||||||||||||||  ||||||||||| | |||  |||||||||||| |||||||    
T  8675876 gtgttaactcagtcaaactcgtcaaacctttcgatttttaccagaaaccgagtttaccttagagttaacacgattttggtacctaaaaacgttaactcgg 8675777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 16709530 - 16709434
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| ||||||||||||| ||||||| |||||| || ||||||  | ||||||||||| |||||| |||| | |||  ||||||||||||||||||||    
T  16709530 gtgttaactcggtcaaacttgtcaaaccttccgagtttaccaaa--ctgagtttacctcagagttaccacgattttggtacctaaaaacgtaaactcgg 16709434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 17683766 - 17683670
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| ||||||||||||| ||||||| |||||| || ||||||  | ||||||||||| |||||| |||| | |||  ||||||||||||||||||||    
T  17683766 gtgttaactcggtcaaacttgtcaaaccttccgagtttaccaaa--ctgagtttacctcagagttaccacgattttggtacctaaaaacgtaaactcgg 17683670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 7993701 - 7993631
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacg 172  Q
    ||||| |||| ||||||||||| |||| ||||||||| |||| ||||||||||||||||  ||||||||||    
T  7993701 gtgttaactcagtcaaactcgttaaaccttccgattttaccagaaaccgagtttacctcatagttaacacg 7993631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 113 - 235
Target Start/End: Complemental strand, 27148931 - 27148809
Alignment:
Q  113 gtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgt 212  Q
    |||||||||||||||| ||| ||||| | |  |||  ||| |||||||||| |||||||| | |||  |||||||||||||||||||    | ||| ||     
T  27148931 gtcaaactcgtcaaacattctgattttagctgaaattgaggttacctccgatttaacacgattttgatacctaaaaacgtaaactcgataaactttgcga 27148832  T
Q  213 gttaacactcgatttgtggaaca 235  Q
    |||||||||||||||||||||||    
T  27148831 gttaacactcgatttgtggaaca 27148809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 29586058 - 29585960
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| |||| ||||||||| | |||| ||||||||| |||  ||||||| |||||||| ||||||||||| | ||   ||||||||||||||||||||    
T  29586058 gtgttaactcagtcaaactcattaaaccttccgattttacccgaaaccgactttacctcagagttaacacgatttttgtacctaaaaacgtaaactcgg 29585960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 29893516 - 29893446
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacg 172  Q
    ||||| |||| ||||||||||| |||| || ||||||||||| |||| ||||||||||| |||||||||||    
T  29893516 gtgttaactcagtcaaactcgttaaacctttcgatttcaccagaaactgagtttacctcagagttaacacg 29893446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 40460375 - 40460473
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| |||| ||||||||||| |||| |||| |||| |||| ||||||| |||||||| ||||||||||| | ||   |||||||| |||||||||||    
T  40460375 gtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaagcgtaaactcgg 40460473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 42610714 - 42610616
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| ||||||||||||||||||||| ||| ||||| |||| ||||| ||||||||||  | |||||||| | |||  ||||||| ||||||| ||||    
T  42610714 gtgttaactcggtcaaactcgtcaaaccttctgattttaccagaaaccaagtttacctcaaatttaacacgattttggtacctaaacacgtaaattcgg 42610616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 510190 - 510093
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||| |||| ||||||||||| |||| |||| |||| |||| ||||||| |||||||| ||||||||||| | ||   ||||||||| |||||||||    
T  510190 gtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcg 510093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 28342855 - 28342758
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||| |||| ||||||||||| |||| |||| |||| |||| ||||||| |||||||| ||||||||||| | ||   ||||||||| |||||||||    
T  28342855 gtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcg 28342758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 37328451 - 37328354
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||| |||| ||||||| ||| |||| ||||||||| |||| ||| |||||||||||  ||||||||||| | ||   |||||||||||||||||||    
T  37328451 gtgttaactcagtcaaacacgttaaaccttccgattttaccagaaatcgagtttaccttagagttaacacgatttttgtacctaaaaacgtaaactcg 37328354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 39784651 - 39784554
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||| |||| ||||||||||| |||| |||| |||| |||| ||||||| |||||||| ||||||||||| | ||   ||||||||| |||||||||    
T  39784651 gtgttaactctgtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcg 39784554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 92 - 200
Target Start/End: Original strand, 28034499 - 28034607
Alignment:
Q  92 agtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacg 191  Q
    |||||| || ||||| |||| ||||||||||| |||| |||| |||| |||| ||||||| ||||| || ||||||||||| | ||   || ||||||||    
T  28034499 agtttaccaagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacatcagagttaacacgatttttgtacataaaaacg 28034598  T
Q  192 taaactcgg 200  Q
    |||||||||    
T  28034599 taaactcgg 28034607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 92 - 200
Target Start/End: Original strand, 44121584 - 44121692
Alignment:
Q  92 agtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacg 191  Q
    |||||| || ||||| |||| ||||||||||| || | ||||||||| |||| ||||||| ||||||||  |||||||||| | ||   |||||||||||    
T  44121584 agtttaccaagtgttaactcagtcaaactcgttaagccttccgattttaccagaaaccgaatttacctcatagttaacacgatttttgtacctaaaaacg 44121683  T
Q  192 taaactcgg 200  Q
    |||| ||||    
T  44121684 taaattcgg 44121692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 200
Target Start/End: Complemental strand, 18838943 - 18838856
Alignment:
Q  113 gtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||||||||| |||| |||| |||| |||| ||||||| |||||||| ||||||||||| | ||   ||||||||| ||||||||||    
T  18838943 gtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgg 18838856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 200
Target Start/End: Original strand, 26201804 - 26201891
Alignment:
Q  113 gtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    |||||||||||||||| ||||||||| | ||| ||  ||||||||||||||||| ||||| | |||  ||||||||| ||||| ||||    
T  26201804 gtcaaactcgtcaaacattccgattttagcaataattgagtttacctccgagtttacacgattttggtacctaaaaatgtaaattcgg 26201891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 200
Target Start/End: Complemental strand, 32884295 - 32884217
Alignment:
Q  122 gtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||||| ||||||||| |||| |||| ||||||||||| |||||||| || | ||   ||||||||||||||||||||    
T  32884295 gtcaaaccttccgattttaccagaaacagagtttacctcagagttaactcgatttttgtacctaaaaacgtaaactcgg 32884217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 199
Target Start/End: Original strand, 33497107 - 33497193
Alignment:
Q  113 gtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    |||||||||||||||| |||| |||| | || ||| |||||||||||||||||| ||||| | |||  || |||||| |||||||||    
T  33497107 gtcaaactcgtcaaacattccaattttatcagaaatcgagtttacctccgagttgacacgattttgatacttaaaaatgtaaactcg 33497193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 171
Target Start/End: Complemental strand, 23017089 - 23017020
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacac 171  Q
    ||||| ||||||||||||||||||||  |||| |||| || | ||| ||||||||||||| |||||||||    
T  23017089 gtgttaactcggtcaaactcgtcaaatcttccaattttacgagaaatcgagtttacctccaagttaacac 23017020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 29614456 - 29614553
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||| |||| ||||||||||| |||| || | |||| |||| ||||||| |||||||| ||||||||||| | ||   ||||||||| |||||||||    
T  29614456 gtgttaactcagtcaaactcgttaaacctttcaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcg 29614553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 122 - 233
Target Start/End: Original strand, 36415080 - 36415188
Alignment:
Q  122 gtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacact 221  Q
    |||||| ||||||||||||| ||||| |||||||| |||||||||||||  || ||| ||| ||||| | |||||||   ||||||| ||   |||||||    
T  36415080 gtcaaattttccgatttcactaaaaatcgagtttatctccgagttaacaattttttggcacttaaaagcataaactcaaacgagtttgcg---taacact 36415176  T
Q  222 cgatttgtggaa 233  Q
    |||||| |||||    
T  36415177 cgatttatggaa 36415188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 78
Target Start/End: Complemental strand, 35313695 - 35313659
Alignment:
Q  42 ttcaaaggtaaactcggacgagtttactccgagttta 78  Q
    ||||||||||||||| |||||||||||||||||||||    
T  35313695 ttcaaaggtaaactcagacgagtttactccgagttta 35313659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 78
Target Start/End: Complemental strand, 38910619 - 38910583
Alignment:
Q  42 ttcaaaggtaaactcggacgagtttactccgagttta 78  Q
    |||||||||||||||| ||||||||||||||||||||    
T  38910619 ttcaaaggtaaactcgaacgagtttactccgagttta 38910583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 198
Target Start/End: Complemental strand, 41827872 - 41827776
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactc 198  Q
    ||||| |||| |||||||| || |||  ||| ||||| |||| |||| ||||||||||| ||||||||||| | ||   ||||||||||||||||||    
T  41827872 gtgttaactcagtcaaacttgttaaatcttctgattttaccagaaactgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactc 41827776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 102 - 197
Target Start/End: Original strand, 33891895 - 33891990
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaact 197  Q
    ||||| |||| |||||| |||| |||| |||| |||| |||| ||||||| |||||||  ||||||||||| | ||   |||||||||||||||||    
T  33891895 gtgttaactcagtcaaattcgttaaaccttccaattttaccagaaaccgattttaccttagagttaacacgatttttgtacctaaaaacgtaaact 33891990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 43172220 - 43172153
Alignment:
Q  133 cgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    |||||| |||| ||| |||||||||||||||||||||| | | |||  ||||||||| ||||||||||    
T  43172220 cgattttaccagaaatcgagtttacctccgagttaacatgattttgatacctaaaaatgtaaactcgg 43172153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 30823170 - 30823112
Alignment:
Q  114 tcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacg 172  Q
    ||||||||||  ||| ||||||||| || | |||||||||||||||| |||||||||||    
T  30823170 tcaaactcgttgaaccttccgattttactagaaaccgagtttacctcagagttaacacg 30823112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 23101835 - 23101738
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||| |||| ||||||||||| |||| |||| |||| |||| |||| || |||||||  ||||||||||| | ||   ||||||||| |||||||||    
T  23101835 gtgttaactcagtcaaactcgttaaaccttccaattttaccagaaactgattttaccttagagttaacacgatttttgtacctaaaaatgtaaactcg 23101738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 199
Target Start/End: Original strand, 37915919 - 37915996
Alignment:
Q  122 gtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    |||||||| | |||||| |||| ||| |||||||||||| ||||||| ||| | ||  |||||||| |||||||||||    
T  37915919 gtcaaactgttcgattttaccataaatcgagtttacctctgagttaaaacgcttttagcacctaaacacgtaaactcg 37915996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 6213051 - 6213015
Alignment:
Q  202 cgagtttacgtgttaacactcgatttgtggaacagtg 238  Q
    |||||||||| |||||||||| |||||||||||||||    
T  6213051 cgagtttacgagttaacactcaatttgtggaacagtg 6213015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 148
Target Start/End: Original strand, 32701318 - 32701394
Alignment:
Q  72 gagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaac 148  Q
    |||||||||| | |||||| | ||||| | ||||| ||| ||||||| | ||||||| || ||||||||||||||||    
T  32701318 gagtttacacaattttaccgaatttaataagtgttaacttggtcaaattagtcaaacatttcgatttcaccaaaaac 32701394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 151; Significance: 9e-80; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 49 - 239
Target Start/End: Original strand, 31996199 - 31996388
Alignment:
Q  49 gtaaactcggacgagtttactccgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaac 148  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  31996199 gtaaactcggacgagtttactc-gagtttacacgagtttaccgagtttaacacgtgttaactcggtcaaactcgtcaaactttccgatttcaccaaaaat 31996297  T
Q  149 cgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaacagtgg 239  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||  |||||||    
T  31996298 cgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactcgagcgagtttgcgtgttaacactcgatttgtgatacagtgg 31996388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 42 - 238
Target Start/End: Original strand, 7835316 - 7835503
Alignment:
Q  42 ttcaaaggtaaactcggacgagtttactccgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcac 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||         ||||||||||||||||    
T  7835316 ttcaaaggtaaactcggacgagtttactccgagtttacacgagtttaccgagtttaacacgtgttaactcggtca---------aactttccgatttcac 7835406  T
Q  142 caaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaacagtg 238  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  7835407 caaaaaccgagtttacctccgacttaacacgtttttgccacctaaaaacgtaaactcggacgagtttacgtgttaacactcgatttgtggaacagtg 7835503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 53 - 238
Target Start/End: Complemental strand, 21199700 - 21199515
Alignment:
Q  53 actcggacgagtttactccgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgag 152  Q
    ||||||| |||||||||| ||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  21199700 actcggatgagtttactctgagtttacacgagtttaccgagtttaacacatgttaactcggtcaaactcgtcaaactttccgatttcaccaaaaatcgag 21199601  T
Q  153 tttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaacagtg 238  Q
    |||||||  ||||||||||| | ||||||||||||||||||||||  ||| |||||||| ||||||||||||||||||||||||||    
T  21199600 tttaccttggagttaacacggttttgccacctaaaaacgtaaactttggcaagtttacgagttaacactcgatttgtggaacagtg 21199515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 80 - 235
Target Start/End: Original strand, 8779562 - 8779717
Alignment:
Q  80 acgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgc 179  Q
    ||||||||||| ||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  8779562 acgagtttaccgagtttaacacgagttaacttggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgtttttgc 8779661  T
Q  180 cacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaaca 235  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||    
T  8779662 cacctaaaaacgtaaactcggacgagtttacgagttaacactcgatttgtgaaaca 8779717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 1463674 - 1463772
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| ||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||| ||  |||||||| ||||||||||||    
T  1463674 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcgg 1463772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 6788197 - 6788099
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| ||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||| ||  |||||||| ||||||||||||    
T  6788197 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcgg 6788099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 108 - 200
Target Start/End: Original strand, 10113789 - 10113881
Alignment:
Q  108 actcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||   ||||||| ||||||||||||    
T  10113789 actcggtcaaactcgtcaaactttccgattttaccaaaaaacgagtttacctccgagttaacacgtttttaggacctaaacacgtaaactcgg 10113881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 81 - 235
Target Start/End: Original strand, 21010859 - 21011013
Alignment:
Q  81 cgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgcc 180  Q
    |||||||| | ||||| |||||| || ||||||| ||||||||||||| ||  ||||||||||||||||||||| |||| ||| |||||||||  ||  |    
T  21010859 cgagtttaacgagttttacacgtattaactcggttaaactcgtcaaacattttgatttcaccaaaaaccgagttgaccttcgaattaacacgtatttaac 21010958  T
Q  181 acctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaaca 235  Q
    ||||||||| | ||||||   |||||||||  ||||||| ||||||| |||||||    
T  21010959 acctaaaaatgcaaactcaaacgagtttactagttaacattcgatttatggaaca 21011013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 92 - 233
Target Start/End: Complemental strand, 12029082 - 12028941
Alignment:
Q  92 agtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacg 191  Q
    ||||||| ||||||| |||  |||||||||||||||| || ||||||||  ||||| ||||||||||||  |||||||||||| ||| | |||||||||     
T  12029082 agtttaatacgtgttaactatgtcaaactcgtcaaacatttcgatttcaataaaaatcgagtttacctcaaagttaacacgtttttgacccctaaaaaca 12028983  T
Q  192 taaactcgggcgagtttacgtgttaacactcgatttgtggaa 233  Q
    |||| ||   | |||||| | |||||||||||||||||||||    
T  12028982 taaagtcaaacaagtttatgagttaacactcgatttgtggaa 12028941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 113 - 198
Target Start/End: Complemental strand, 13461459 - 13461374
Alignment:
Q  113 gtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactc 198  Q
    |||||||||||||||| ||| ||||| ||||||||||||||||||||||||||| ||||| | |||  || |||||||||||||||    
T  13461459 gtcaaactcgtcaaacattctgattttaccaaaaaccgagtttacctccgagttgacacgattttgatacataaaaacgtaaactc 13461374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 198
Target Start/End: Original strand, 31975661 - 31975751
Alignment:
Q  108 actcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactc 198  Q
    ||||||||||||||||||||| ||||||||| || | ||| |||||||||||| ||||||||||| | |||  ||||||| || |||||||    
T  31975661 actcggtcaaactcgtcaaaccttccgattttacaagaaatcgagtttacctcagagttaacacgattttggtacctaaacacataaactc 31975751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 195
Target Start/End: Complemental strand, 3000337 - 3000244
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaa 195  Q
    ||||| ||||| ||||||||||||||||| ||||||| |||| ||| ||| |||||| ||||||||||||| | |||  ||||||| |||||||    
T  3000337 gtgttaactcgatcaaactcgtcaaacttcccgattttaccataaatcgaatttacccccgagttaacacgattttggtacctaaacacgtaaa 3000244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 197
Target Start/End: Complemental strand, 7497631 - 7497548
Alignment:
Q  114 tcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaact 197  Q
    |||||||||| |||| |||| |||| |||| |||||||||||||||| ||||||||||| | ||   |||||||||||||||||    
T  7497631 tcaaactcgttaaaccttccaattttaccagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaact 7497548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 199
Target Start/End: Complemental strand, 16438789 - 16438706
Alignment:
Q  116 aaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||||||||||| ||||||||| |||| ||  ||||||||||||| |||||||||| | ||   |||||||||||||||||||    
T  16438789 aaactcgtcaaaccttccgattttaccagaagtcgagtttacctccaagttaacacgatttttgtacctaaaaacgtaaactcg 16438706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 31535069 - 31535160
Alignment:
Q  108 actcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||||||||||||||||||| || |||||| |||| ||| ||||||| |||| ||||||||||  | |||  ||||||||| |||||||||    
T  31535069 actcggtcaaactcgtcaaacctttcgattttaccagaaatcgagtttgcctcagagttaacacaattttgatacctaaaaatgtaaactcg 31535160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 31067977 - 31067880
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||| |||| ||||||||||| |||| |||| |||| |||| ||||||| |||||||| ||||||||||| | ||   ||||||||| |||||||||    
T  31067977 gtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcg 31067880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 102 - 198
Target Start/End: Complemental strand, 2606992 - 2606896
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactc 198  Q
    ||||| |||||||||||||| |||||| ||| ||||| |||| ||| |||||||||||| ||||||| ||| | |||   |||||| ||||||||||    
T  2606992 gtgttaactcggtcaaactcatcaaaccttctgattttaccagaaatcgagtttacctcagagttaaaacgattttggtgcctaaacacgtaaactc 2606896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 31896182 - 31896112
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacg 172  Q
    ||||| |||| ||||||||||| |||| |||| |||| |||| ||||||| |||||||| |||||||||||    
T  31896182 gtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacg 31896112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 4200107 - 4200175
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaaca 170  Q
    ||||| |||| ||||||||||| |||| |||| |||| |||| ||||||| |||||||| |||||||||    
T  4200107 gtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaaca 4200175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 15381593 - 15381641
Alignment:
Q  180 cacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttg 228  Q
    |||||||||||||||||| |  ||||||||||| |||||||||||||||    
T  15381593 cacctaaaaacgtaaacttgatcgagtttacgttttaacactcgatttg 15381641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 200
Target Start/End: Original strand, 28900863 - 28900939
Alignment:
Q  124 caaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| ||||||||| |||| ||| |||||||||||| ||||||||||| | |||  ||||||| | ||||||||||    
T  28900863 caaaccttccgattttaccagaaatcgagtttacctcagagttaacacgattttggtacctaaacatgtaaactcgg 28900939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 102 - 197
Target Start/End: Original strand, 14262092 - 14262187
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaact 197  Q
    ||||| |||| ||||||||||| |||| |||| |||| |||| ||| ||| |||||||| ||||||||||| | ||   ||||||||| |||||||    
T  14262092 gtgttaactcagtcaaactcgttaaaccttccaattttaccagaaatcgattttacctcagagttaacacgatttttgtacctaaaaaagtaaact 14262187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 102 - 197
Target Start/End: Original strand, 34758735 - 34758830
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaact 197  Q
    ||||| |||| |||||||| || |||| |||| |||| | || ||||||| |||||||| ||||||||||| | ||   |||||||||||||||||    
T  34758735 gtgttaactcagtcaaacttgttaaaccttccaattttatcagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaact 34758830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 149
Target Start/End: Complemental strand, 24194511 - 24194463
Alignment:
Q  102 gtgttcactcggtcaa-actcgtcaaactttccgatttcaccaaaaacc 149  Q
    ||||| |||||||||| |||||||||||||||| |||| ||||||||||    
T  24194511 gtgttaactcggtcaatactcgtcaaactttccaattttaccaaaaacc 24194463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 140; Significance: 3e-73; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 92 - 239
Target Start/End: Complemental strand, 7798628 - 7798481
Alignment:
Q  92 agtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacg 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7798628 agtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacg 7798529  T
Q  192 taaactcgggcgagtttacgtgttaacactcgatttgtggaacagtgg 239  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  7798528 taaactcgggcgagtttacgtgttaatactcgatttgtggaacagtgg 7798481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 45 - 192
Target Start/End: Original strand, 33886806 - 33886953
Alignment:
Q  45 aaaggtaaactcggacgagtttactccgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaa 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33886806 aaaggtaaactcggacgagtttactccgagtttacacgagtttaccgagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaa 33886905  T
Q  145 aaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgt 192  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  33886906 aaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgt 33886953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 45 - 192
Target Start/End: Complemental strand, 33957444 - 33957297
Alignment:
Q  45 aaaggtaaactcggacgagtttactccgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaa 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33957444 aaaggtaaactcggacgagtttactccgagtttacacgagtttaccgagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaa 33957345  T
Q  145 aaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgt 192  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  33957344 aaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgt 33957297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 43 - 230
Target Start/End: Complemental strand, 34019296 - 34019109
Alignment:
Q  43 tcaaaggtaaactcggacgagtttactccgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcacc 142  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  34019296 tcaaaggtaaactcggacgagtttactccgagtttacacgagtttaccgaatttaacacgtgttaactcggtcaacctcgtcaaactttccgatttcacc 34019197  T
Q  143 aaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtg 230  Q
    ||||| ||| ||||||||||||||||||| || ||||||||| ||||||||||||||| |||||||||| |||||||||| |||||||    
T  34019196 aaaaatcgaatttacctccgagttaacacatttttgccaccttaaaacgtaaactcggacgagtttacgagttaacactcaatttgtg 34019109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 49 - 235
Target Start/End: Original strand, 34751522 - 34751708
Alignment:
Q  49 gtaaactcggacgagtttactccgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaac 148  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||    
T  34751522 gtaaactcggacgagtttactccgagtttacacgagtttaccgagtttaacacgtgttaactcggtcaaacttggcaaactttccgatttcaccaaaaac 34751621  T
Q  149 cgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaaca 235  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||||||||| ||| |||||| |||||| ||| ||||||||||||    
T  34751622 cgagtttacctccgagttaacacgtttttgccatttaaaaacgtaaactcggtcgaatttacgagttaaccctcaatttgtggaaca 34751708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 1108492 - 1108335
Alignment:
Q  80 acgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgc 179  Q
    ||||||||| | ||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |    
T  1108492 acgagtttatcgagtttaacacgcgttaactcagtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagtttacacgtttttac 1108393  T
Q  180 cacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaacagt 237  Q
    ||||||||||||||||||| | ||| |||||| |||||||||||||||||||||||||    
T  1108392 cacctaaaaacgtaaactcagacgaatttacgagttaacactcgatttgtggaacagt 1108335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 122 - 238
Target Start/End: Complemental strand, 18954563 - 18954447
Alignment:
Q  122 gtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacact 221  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||    
T  18954563 gtcaaactttccgatttcaccaaaaaccgagtttacgtccgagttaacacgtttttgccacctaaaaacgtaaactcgggcgaatttacgagttaacact 18954464  T
Q  222 cgatttgtggaacagtg 238  Q
    |||||||||||||||||    
T  18954463 cgatttgtggaacagtg 18954447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 4005185 - 4005087
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| ||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||| ||  |||||||| ||||||||||||    
T  4005185 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcgg 4005087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 102 - 197
Target Start/End: Original strand, 1243309 - 1243404
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaact 197  Q
    ||||| ||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||| ||  |||||||| |||||||||    
T  1243309 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaact 1243404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 9192142 - 9192044
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| ||||||||||||||||||||||||| ||||| |||| ||| |||||||||||||||||||||||||| ||  |||||||| ||||||||||||    
T  9192142 gtgttaactcggtcaaactcgtcaaactttctgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcgg 9192044  T

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Target: chr1; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 41353539 - 41353441
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| ||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||| ||  |||||||| || |||||||||    
T  41353539 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacataaactcgg 41353441  T

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Target: chr1; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 51107010 - 51106912
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| ||||||||||||||||||||||||||||||| |||| ||| ||||||| |||||||||||||||||| ||  |||||||| ||||||||||||    
T  51107010 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagttttcctccgagttaacacgtttttagcacctaaacacgtaaactcgg 51106912  T

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Target: chr1; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 8147435 - 8147337
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| |||||||||||||||||||||||| | |||| |||| ||| |||||||||||||||||||||||||| ||  |||||||| ||||||||||||    
T  8147435 gtgttaactcggtcaaactcgtcaaactttgcaattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcgg 8147337  T

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Target: chr1; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 26757733 - 26757635
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| ||||||||||||||||||||||||||||||| |||| ||| |||||||||||| |||||||| |||| ||  |||||||| ||||||||||||    
T  26757733 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctctgagttaactcgtttttagcacctaaacacgtaaactcgg 26757635  T

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Target: chr1; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 11579103 - 11579200
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||| ||||||||||||||||||||||||||||||| |||| ||| | | |||||||||||||||||||||| ||  |||||||| |||||||||||    
T  11579103 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcaaatttacctccgagttaacacgtttttagcacctaaacacgtaaactcg 11579200  T

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Target: chr1; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 5494751 - 5494849
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| |||| ||||||||| |||||| ||| ||||| |||| |||||||||||||||| ||||||||||| | |||  ||||||||||||||||||||    
T  5494751 gtgttaactcagtcaaactcatcaaaccttctgattttaccagaaaccgagtttacctcagagttaacacgattttggtacctaaaaacgtaaactcgg 5494849  T

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Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 102 - 195
Target Start/End: Original strand, 5209371 - 5209464
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaa 195  Q
    ||||| ||||| ||||||||||||||||||| |||||||||| ||| |||||| ||||||||||||||||| | |||  ||||||| |||||||    
T  5209371 gtgttaactcgatcaaactcgtcaaactttctgatttcaccagaaatcgagttgacctccgagttaacacgattttggtacctaaacacgtaaa 5209464  T

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Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 45273112 - 45273015
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||| |||| |||||||||||||||| ||||||||| |||| |||||||||||||||| ||||||||||  | ||   |||||||||||||||||||    
T  45273112 gtgttaactcagtcaaactcgtcaaaccttccgattttaccagaaaccgagtttacctcagagttaacacaatttttgtacctaaaaacgtaaactcg 45273015  T

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Target: chr1; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 47371578 - 47371675
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||| ||||||||||||||| ||||| ||||||||| |||| ||| |||||||||||||||||||||||| | |||  ||||||  |||||||||||    
T  47371578 gtgttaactcggtcaaactcggcaaaccttccgattttaccagaaatcgagtttacctccgagttaacacgattttggtacctaagtacgtaaactcg 47371675  T

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Target: chr1; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 3583559 - 3583657
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| ||||||| ||||||||||||||||||||||| || | ||||||||||||| ||  |||||||||| | | |  ||||||||||||||||||||    
T  3583559 gtgttaactcggttaaactcgtcaaactttccgattttactagaaaccgagtttacttctaagttaacacgatttcggtacctaaaaacgtaaactcgg 3583657  T

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Target: chr1; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 102 - 198
Target Start/End: Original strand, 32760102 - 32760198
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactc 198  Q
    ||||| |||||||||||||||| || | | ||||||| || | |||||||||||||||| ||||||||||| | |||  ||||||||||||||||||    
T  32760102 gtgttaactcggtcaaactcgttaagcctcccgattttactagaaaccgagtttacctcagagttaacacgattttggtacctaaaaacgtaaactc 32760198  T

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Target: chr1; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 176 - 227
Target Start/End: Complemental strand, 29028029 - 29027978
Alignment:
Q  176 ttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgattt 227  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  29028029 ttgccacctaaaaacgtaaactcggacgagtttacgagttaacactcgattt 29027978  T

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Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 200
Target Start/End: Complemental strand, 46328519 - 46328433
Alignment:
Q  114 tcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    |||||||||| |||| ||||||||| | || |||||||||||||||| ||||||||||| | ||   ||||||||||||||||||||    
T  46328519 tcaaactcgttaaaccttccgattttaacagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcgg 46328433  T

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Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 198
Target Start/End: Original strand, 48966500 - 48966590
Alignment:
Q  108 actcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactc 198  Q
    ||||||||||||||||||||| |||| |||||| || ||| | |||||||||| ||||||||||| | |||  ||||||| ||||||||||    
T  48966500 actcggtcaaactcgtcaaaccttccaatttcatcagaaatcaagtttacctcagagttaacacgattttggtacctaaacacgtaaactc 48966590  T

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Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 198
Target Start/End: Original strand, 48177095 - 48177192
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcacca-aaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactc 198  Q
    ||||| |||| ||||||||||| |||| |||| |||| |||| |||||||| |||||||| ||||||||||| | || | ||||||||||||||||||    
T  48177095 gtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaaccgattttacctcagagttaacacgatttttctacctaaaaacgtaaactc 48177192  T

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Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 103 - 171
Target Start/End: Complemental strand, 15927416 - 15927348
Alignment:
Q  103 tgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacac 171  Q
    |||| |||| |||||||||||||||||||||||||| | || ||||||| |||||||| ||||||||||    
T  15927416 tgttaactcagtcaaactcgtcaaactttccgattttatcagaaaccgaatttacctcagagttaacac 15927348  T

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Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 114 - 234
Target Start/End: Original strand, 21248490 - 21248610
Alignment:
Q  114 tcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtg 213  Q
    ||||||||||||||| |||| |||||| |||||| | | ||||| ||| |||||||||| | ||| |||||||||||||||||| |   |||| ||||      
T  21248490 tcaaactcgtcaaacattccaatttcaacaaaaaaccattttacttccaagttaacacgattttgacacctaaaaacgtaaactagtctgagtctacgat 21248589  T
Q  214 ttaacactcgatttgtggaac 234  Q
    ||||||||||| || ||||||    
T  21248590 ttaacactcgacttatggaac 21248610  T

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Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 42304503 - 42304571
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaaca 170  Q
    ||||| |||||||||||||||| |||| |||| |||| |||| ||||||||||||||||||| ||||||    
T  42304503 gtgttaactcggtcaaactcgttaaaccttccaattttaccagaaaccgagtttacctccgaattaaca 42304571  T

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Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 113 - 200
Target Start/End: Original strand, 49971609 - 49971697
Alignment:
Q  113 gtcaaactcgtcaa-actttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    |||||||||||||| || || |||||| |||| ||| |||||||||||||||||| ||||| | |||  ||||||||||||||||||||    
T  49971609 gtcaaactcgtcaacacatttcgattttaccagaaaacgagtttacctccgagttgacacgattttggtacctaaaaacgtaaactcgg 49971697  T

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Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 154
Target Start/End: Original strand, 42638006 - 42638088
Alignment:
Q  71 cgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtt 154  Q
    ||||||||| |||||||||||| || ||||| |||| | |||||||||||| |||||| ||| ||||||| |||||||||||||    
T  42638006 cgagtttacccgagtttaccaaattaaacacatgttaagtcggtcaaactcatcaaacattctgatttca-caaaaaccgagtt 42638088  T

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Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 200
Target Start/End: Complemental strand, 49231541 - 49231454
Alignment:
Q  113 gtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||||||||| |||| ||||||||  |||| |||||||||||||||| ||||||||||| | ||   |||||||||| |||||||||    
T  49231541 gtcaaactcgttaaaccttccgattataccagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacataaactcgg 49231454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 49236975 - 49237066
Alignment:
Q  108 actcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||||||||||||||||||| || |||||| |||| |||||||| ||| |||||| |||||||| | |||  ||||||| || ||||||||    
T  49236975 actcggtcaaactcgtcaaacctttcgattttaccagaaaccgagcttaactccgaattaacacggttttggtacctaaacacataaactcg 49237066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 15834687 - 15834785
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| |||| ||||||||||| |||| |||| |||| |||||||| ||| |||||||| ||||||||||| | ||   ||||||||| ||||||||||    
T  15834687 gtgttaactcagtcaaactcgttaaaccttccaattttaccaaaaatcgaatttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgg 15834785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 113 - 195
Target Start/End: Original strand, 27257872 - 27257954
Alignment:
Q  113 gtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaa 195  Q
    |||||||||||||||| ||||||||| ||| |||| | |||||||||| ||||| ||||| | |||  |||||||||||||||    
T  27257872 gtcaaactcgtcaaacattccgattttaccgaaaatcaagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 27257954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 6313121 - 6313024
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||| |||| ||||||||||| |||| |||| |||| |||| ||||||| |||||||| ||||||||||| | ||   ||||||||| |||||||||    
T  6313121 gtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcg 6313024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 25612637 - 25612540
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||| |||| ||||||||||| |||| |||| |||| |||| ||||||| |||||||| ||||||||||| | ||   ||||||||| |||||||||    
T  25612637 gtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcg 25612540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 29396087 - 29396184
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||| |||| ||||||||||| |||| |||| |||| |||| ||||||| |||||||| ||||||||||| | ||   ||||||||| |||||||||    
T  29396087 gtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcg 29396184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 195
Target Start/End: Original strand, 35177213 - 35177306
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaa 195  Q
    ||||| ||||||||||||||||||| | ||||||||| | || ||| |||||||||||| || |||||||| | |||  |||||||||| ||||    
T  35177213 gtgttaactcggtcaaactcgtcaatccttccgattttatcagaaatcgagtttacctctgaattaacacgattttggtacctaaaaacataaa 35177306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 18798997 - 18798899
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| |||| ||||| ||||| |||| |||| |||| |||| ||||||| |||||||| ||||||||||| | ||   ||||||||| ||||||||||    
T  18798997 gtgttaactcagtcaatctcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgg 18798899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 107 - 200
Target Start/End: Complemental strand, 3593359 - 3593266
Alignment:
Q  107 cactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    |||||||| ||||| ||||||| ||||||||| |  | ||| ||| |||||||||||||||||||| | |||  |||||||||  |||||||||    
T  3593359 cactcggttaaacttgtcaaaccttccgattttattagaaatcgaatttacctccgagttaacacgattttgatacctaaaaatataaactcgg 3593266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 25253610 - 25253513
Alignment:
Q  103 tgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    |||| |||| |||||||||||||||  |||||| || |||| ||||||| |||||||| |  |||||||| | |||  |||||||||| |||||||||    
T  25253610 tgttaactcagtcaaactcgtcaaatcttccgagtttaccagaaaccgaatttacctcagtattaacacgattttggtacctaaaaacataaactcgg 25253513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 198
Target Start/End: Original strand, 28403949 - 28404045
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactc 198  Q
    ||||| ||||||||||| ||||||||| || |||||| |  | ||||||| ||||||| | |||||||||| | |||  ||||||||| ||||||||    
T  28403949 gtgttaactcggtcaaattcgtcaaacatttcgattttattagaaaccgaatttaccttcaagttaacacgattttggtacctaaaaatgtaaactc 28404045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 38535799 - 38535897
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| |||| ||||||||||| ||   ||||||||| |||| ||||| |||||||||| ||||||||||  | ||   | ||||||||||||||||||    
T  38535799 gtgttaactcagtcaaactcgttaagtcttccgattttaccagaaacccagtttacctcagagttaacacaatttttgtaactaaaaacgtaaactcgg 38535897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 38558017 - 38558115
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| |||| ||||||||||| ||   ||||||||| |||| ||||| |||||||||| ||||||||||  | ||   | ||||||||||||||||||    
T  38558017 gtgttaactcagtcaaactcgttaagtcttccgattttaccagaaacccagtttacctcagagttaacacaatttttgtaactaaaaacgtaaactcgg 38558115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 172
Target Start/End: Original strand, 49453063 - 49453133
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacg 172  Q
    ||||| ||||||||||||| ||||||| ||  |||||  ||| ||| |||||||||||| |||||||||||    
T  49453063 gtgttaactcggtcaaacttgtcaaaccttatgatttttccagaaatcgagtttacctcagagttaacacg 49453133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 8140886 - 8140983
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||| |||| ||||||||| | |||| |||  |||| |||| ||| ||| |||||||| ||||||||||| | ||   |||||||||||||||||||    
T  8140886 gtgttaactcagtcaaactcattaaaccttctaattttaccagaaatcgattttacctcagagttaacacgatttttgtacctaaaaacgtaaactcg 8140983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 199
Target Start/End: Original strand, 9322181 - 9322258
Alignment:
Q  122 gtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||||| |||| |||| |||| ||||||| |||||||| ||||||||||| | ||   ||||||||| |||||||||    
T  9322181 gtcaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcg 9322258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 70
Target Start/End: Complemental strand, 7798659 - 7798631
Alignment:
Q  42 ttcaaaggtaaactcggacgagtttactc 70  Q
    |||||||||||||||||||||||||||||    
T  7798659 ttcaaaggtaaactcggacgagtttactc 7798631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 129; Significance: 1e-66; HSPs: 3)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 1514 - 1327
Alignment:
Q  43 tcaaaggtaaactcggacgagtttactccgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcacc 142  Q
    ||||||||||||||||||||||||||||||||||||||||||||||         ||||||||| ||||||| ||||||||||||||||||||||||||     
T  1514 tcaaaggtaaactcggacgagtttactccgagtttacacgagttta---------acacgtgttaactcggttaaactcgtcaaactttccgatttcact 1424  T
Q  143 aaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaacagtgg 239  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||    
T  1423 aaaaaccgagtttacctccaagttaacatgtttttgccacctaaaaacgtaaactcggtcgagtttacgagttaacactcgatttgtgaaacagtgg 1327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 25642 - 25739
Alignment:
Q  140 accaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaacagtg 238  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  | ||||||||| ||||||||||||||||||||||||||    
T  25642 accaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactc-agagagtttacgagttaacactcgatttgtggaacagtg 25739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 25571 - 25614
Alignment:
Q  45 aaaggtaaactcggacgagtttactccgagtttacacgagttta 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  25571 aaaggtaaactcggacgagtttactccgagtttacacgagttta 25614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 109; Significance: 1e-54; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 42 - 245
Target Start/End: Original strand, 28317025 - 28317218
Alignment:
Q  42 ttcaaaggtaaactcggacgagtttactccgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcac 141  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||          ||||||| |||||||||||||||||||||||| |||||||||    
T  28317025 ttcaaaggtaaactcggacgagtttactccgagtttacaggggtttac----------acgtgttaactcggtcaaactcgtcaaacttttcgatttcac 28317114  T
Q  142 caaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaacagtgggt 241  Q
    |||||| ||||||||||||||||||  ||| || |||||||||||||||||||| |||| ||||||||||  |||||||||||||||| ||||||||| |    
T  28317115 caaaaatcgagtttacctccgagttttcacctttttgccacctaaaaacgtaaattcggacgagtttacgaattaacactcgatttgtagaacagtggtt 28317214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 42 - 238
Target Start/End: Complemental strand, 41252311 - 41252125
Alignment:
Q  42 ttcaaaggtaaactcggacgagtttactccgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcac 141  Q
    ||||||||||||||||||||| |||||||          ||| |||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||     
T  41252311 ttcaaaggtaaactcggacgaatttactc----------cgactttatcaagtttaacacgtgttgactcggttaaactcgtcaaactttccgatttcat 41252222  T
Q  142 caaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaacagtg 238  Q
    |||||| ||||||||| |||||||||||||||| |||||||||||||| |||||||||  ||| |||||  | |||||||||||||||||| |||||    
T  41252221 caaaaatcgagtttacttccgagttaacacgtttttgccacctaaaaaagtaaactcgaacgaatttacaagctaacactcgatttgtggagcagtg 41252125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 49 - 235
Target Start/End: Original strand, 33177799 - 33177984
Alignment:
Q  49 gtaaactcggacgagtttactccgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaac 148  Q
    ||||||| || ||||||||| ||||||||||| ||||||||| ||||||||||||||| |||| |||||||||||||||| || | |||||||||||||     
T  33177799 gtaaacttggtcgagtttac-ccgagtttacatgagtttaccgagtttaacacgtgttaactcagtcaaactcgtcaaacatttcaatttcaccaaaaat 33177897  T
Q  149 cgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaaca 235  Q
    ||||||||||| | | ||||||| || |||  |||||||||| |||| ||| ||||||||||| |||||||||| ||||||||||||    
T  33177898 cgagtttaccttcaaattaacacatttttggtacctaaaaacataaaatcgtgcgagtttacgagttaacactcaatttgtggaaca 33177984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 71 - 235
Target Start/End: Original strand, 1527877 - 1528041
Alignment:
Q  71 cgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaaca 170  Q
    ||||||||| |||||||| || | |||||| ||||| |||  | |||||| ||| ||| |||||||||||||||||| ||||||||||||||||||||||    
T  1527877 cgagtttacccgagtttatcatgattaacatgtgttaacttagccaaacttgtccaacattccgatttcaccaaaaatcgagtttacctccgagttaaca 1527976  T
Q  171 cgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaaca 235  Q
    |||| ||||||| |||||||||||| | || | | ||||||  ||||||||||||||||||||||    
T  1527977 cgtttttgccacttaaaaacgtaaaattggacaaatttacgatttaacactcgatttgtggaaca 1528041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 19484312 - 19484214
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| ||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||| ||  |||||||| || |||||||||    
T  19484312 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacataaactcgg 19484214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 8029844 - 8029941
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||| ||||||||||||||||||||| ||||||||| |||| ||| |||||||| ||| ||||||||||| | |||  ||||||| |||||||||||    
T  8029844 gtgttaactcggtcaaactcgtcaaaccttccgattttaccagaaatcgagtttatctcagagttaacacgattttggtacctaaacacgtaaactcg 8029941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 195
Target Start/End: Original strand, 6388139 - 6388222
Alignment:
Q  112 ggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaa 195  Q
    ||||||||| ||||||||||||||||| |||| |||| ||||||||||||||||||||||| | |||  |||||||||| ||||    
T  6388139 ggtcaaacttgtcaaactttccgattttaccataaacagagtttacctccgagttaacacgattttggtacctaaaaacataaa 6388222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 10294994 - 10295092
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacg-ttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| |||| ||||||||||| |||| ||||||||| |||| |||||||||||||||| ||||||||||| || |||  ||||||||||||||||||||    
T  10294994 gtgttaactcagtcaaactcgttaaaccttccgattttaccagaaaccgagtttacctcagagttaacacgattgttg-tacctaaaaacgtaaactcgg 10295092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 9288149 - 9288247
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| |||| ||||||||||| |||| |||| |||| |||| ||||||| |||||||| ||||||||||| | ||   ||||||||||||||||||||    
T  9288149 gtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaactcgg 9288247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 31625854 - 31625756
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| |||| ||||||||||| |||| ||||||||| |||| |||||||||||||||| ||||||||||  | ||   ||||||||| ||||||||||    
T  31625854 gtgttaactcagtcaaactcgttaaaccttccgattttaccagaaaccgagtttacctcagagttaacacaatttttgtacctaaaaatgtaaactcgg 31625756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 119 - 189
Target Start/End: Original strand, 12522528 - 12522598
Alignment:
Q  119 ctcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaa 189  Q
    |||||||||| ||||||||| |||| |||||||||||||||| ||||||||||| | |||  |||||||||    
T  12522528 ctcgtcaaaccttccgattttaccagaaaccgagtttacctctgagttaacacgattttggtacctaaaaa 12522598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 200
Target Start/End: Complemental strand, 24067234 - 24067105
Alignment:
Q  71 cgagtttacacgagtttaccaagtttaacacgtgttcactcg-gtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaac 169  Q
    ||||||||| |||||||||| | ||| || || ||| ||||| ||| |||||||||||| | ||||||| |||| |||  ||||| ||||||||||| ||    
T  24067234 cgagtttacccgagtttaccgattttgac-cgagttaactcgagtcgaactcgtcaaacatgccgattttaccagaaattgagttcacctccgagttgac 24067136  T
Q  170 acgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||| | |||  ||||||||||||||||||||    
T  24067135 acgattttggtacctaaaaacgtaaactcgg 24067105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 26856651 - 26856581
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacg 172  Q
    ||||| |||| ||||||||||| |||| ||| ||||| |||| |||||||||||||||| |||||||||||    
T  26856651 gtgttaactcagtcaaactcgttaaaccttctgattttaccagaaaccgagtttacctcagagttaacacg 26856581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 17234800 - 17234747
Alignment:
Q  113 gtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagtt 166  Q
    |||||||||||||||| ||||||||| |||| ||| ||||||||||||||||||    
T  17234800 gtcaaactcgtcaaacattccgattttaccagaaatcgagtttacctccgagtt 17234747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 92 - 232
Target Start/End: Original strand, 4871103 - 4871243
Alignment:
Q  92 agtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacg 191  Q
    |||||||||| |||| ||||||| ||||||||||||| | |  |||| |  ||||| |||||||||||| || |||||||||  ||  ||||| |||||     
T  4871103 agtttaacacatgttaactcggttaaactcgtcaaacatactaattttataaaaaatcgagtttacctctgaattaacacgtatttagcacctgaaaaca 4871202  T
Q  192 taaactcgggcgagtttacgtgttaacactcgatttgtgga 232  Q
    |||| |||| ||||  |||  ||||||||| ||||||||||    
T  4871203 taaattcggacgagcctacaagttaacacttgatttgtgga 4871243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 27878650 - 27878729
Alignment:
Q  114 tcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgta 193  Q
    ||||||||||||||| | ||||||| |||| ||||||| ||||| |||||||||||||| | |||  ||||||| |||||    
T  27878650 tcaaactcgtcaaacctaccgattttaccagaaaccgaatttacatccgagttaacacgattttggtacctaaacacgta 27878729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 28018831 - 28018910
Alignment:
Q  114 tcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgta 193  Q
    ||||||||||||||| | ||||||| |||| ||||||| ||||| |||||||||||||| | |||  ||||||| |||||    
T  28018831 tcaaactcgtcaaacctaccgattttaccagaaaccgaatttacatccgagttaacacgattttggtacctaaacacgta 28018910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 125 - 200
Target Start/End: Complemental strand, 32498064 - 32497989
Alignment:
Q  125 aaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    |||| ||||||||| || | |||||||||||||||| ||||||||||| | ||   ||||||||||||||||||||    
T  32498064 aaaccttccgattttactagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcgg 32497989  T

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Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 154
Target Start/End: Original strand, 12522407 - 12522489
Alignment:
Q  73 agtttacacgagtttac-caagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtt 154  Q
    |||||||||||| |||| | |||||| || ||||| ||||||||||||||||||||| || | |||| |||| ||||||||||    
T  12522407 agtttacacgagcttacacgagtttaccaagtgttaactcggtcaaactcgtcaaacctttcaattttaccagaaaccgagtt 12522489  T

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Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 172
Target Start/End: Original strand, 14781787 - 14781857
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacg 172  Q
    ||||| |||| ||||||||||| |||| |||| |||| |||| ||||||| |||||||| |||||||||||    
T  14781787 gtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacg 14781857  T

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Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 18305631 - 18305729
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| |||| ||||||||| | |||| |||| |||| |||| ||||||| |||||||| ||||||||||| | ||   |||||||||||||| |||||    
T  18305631 gtgttaactcagtcaaactctttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaagctcgg 18305729  T

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Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 19717529 - 19717627
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| |||| ||||| ||||| |||| |||| |||| |||| ||||||| |||||||| ||||||||||| | ||   ||||||||| ||||||||||    
T  19717529 gtgttaactcagtcaatctcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgg 19717627  T

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Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 199
Target Start/End: Original strand, 37131301 - 37131387
Alignment:
Q  113 gtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||||||| |||||| ||| ||||| |||| ||  |||||||||||||||||| ||||| | |||  ||||||||| |||||||||    
T  37131301 gtcaaactcttcaaacattctgattttaccagaagtcgagtttacctccgagttgacacgattttggtacctaaaaatgtaaactcg 37131387  T

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Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 43166331 - 43166429
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| |||| |||||||||||||||| || | |||| |||| ||||  | |||||||| ||||||||||| | ||   ||||||||||||||||||||    
T  43166331 gtgttaactcagtcaaactcgtcaaacctttcaattttaccagaaacttattttacctcagagttaacacgatttttgtacctaaaaacgtaaactcgg 43166429  T

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Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 172
Target Start/End: Original strand, 44725446 - 44725516
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacg 172  Q
    ||||| |||| ||||||||||| |||| |||| |||| |||| ||||||| |||||||| |||||||||||    
T  44725446 gtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacg 44725516  T

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Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 42305260 - 42305357
Alignment:
Q  103 tgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    |||| |||| ||||| ||||| |||| |||| |||| |||| ||||||| |||||||| ||||||||||| | ||   ||||||||| ||||||||||    
T  42305260 tgttaactcagtcaatctcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttatacctaaaaaggtaaactcgg 42305357  T

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Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 122 - 197
Target Start/End: Complemental strand, 41394033 - 41393958
Alignment:
Q  122 gtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaact 197  Q
    ||||||| || |||||| | || |||| |||||||||||||| |||||||| | |||  |||||||||||||||||    
T  41394033 gtcaaacctttcgattttatcagaaactgagtttacctccgaattaacacgattttgatacctaaaaacgtaaact 41393958  T

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Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 195
Target Start/End: Complemental strand, 16364241 - 16364159
Alignment:
Q  113 gtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaa 195  Q
    ||||||||||| |||| ||||||||| || | ||||||| |||||||  ||||||||||| | ||   |||||||||||||||    
T  16364241 gtcaaactcgttaaaccttccgattttactagaaaccgaatttaccttagagttaacacgatttttgtacctaaaaacgtaaa 16364159  T

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Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 172
Target Start/End: Original strand, 26620349 - 26620419
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacg 172  Q
    ||||| ||||| |||||||||||||||||| |||||| | || |||| || |||||| || ||||||||||    
T  26620349 gtgttaactcgatcaaactcgtcaaacttttcgattttatcagaaactgaatttaccaccaagttaacacg 26620419  T

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Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 43308163 - 43308260
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||| |||| |||||||| || |||| |||| |||| |||| ||||||| ||||  || ||||||||||| | |||  ||||||||||| |||||||    
T  43308163 gtgttaactcagtcaaacttgttaaaccttccaattttaccagaaaccgattttatatcagagttaacacgattttggtacctaaaaacgcaaactcg 43308260  T

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Target: scaffold0421 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0421
Description:

Target: scaffold0421; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 42 - 171
Target Start/End: Complemental strand, 1846 - 1727
Alignment:
Q  42 ttcaaaggtaaactcggacgagtttactccgagtttacacgagtttaccaagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcac 141  Q
    |||||||||||||||||||||||||||||||||||||           ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1846 ttcaaaggtaaactcggacgagtttactccgagtttaa----------caagtttaacacgtgttaactcggtcaaactcgtcaaactttccgatttcac 1757  T
Q  142 caaaaaccgagtttacctccgagttaacac 171  Q
    |||||| |||||||||||||||||||||||    
T  1756 caaaaatcgagtttacctccgagttaacac 1727  T

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Target: scaffold0433 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 447 - 350
Alignment:
Q  142 caaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgggcgagtttacgtgttaacactcgatttgtggaacagtgg 239  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||    
T  447 caaaaaccgagtttacctccgagttaacacgtttttgccacataaaaacgtaaactcgaacgagtttacgtgttaacactcgatttgtgaaacagtgg 350  T

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Target: scaffold1128 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 908 - 1006
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| |||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||| | |||  ||||||| ||||||||||||    
T  908 gtgttaactcggtcaaactcatcaaactttccgattttaccagaaaccgagtttacctccgagttaacacgattttggtacctaaacacgtaaactcgg 1006  T

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Target: scaffold0110 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 108 - 200
Target Start/End: Original strand, 39297 - 39389
Alignment:
Q  108 actcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    |||| |||||||||||||||| || |||||| |||| |||||||||| ||||| | ||||||||| | |||  ||||||||||||||||||||    
T  39297 actcagtcaaactcgtcaaacctttcgattttaccagaaaccgagttgacctcagggttaacacgattttggtacctaaaaacgtaaactcgg 39389  T

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Target: scaffold0013 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 89377 - 89280
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcg 199  Q
    ||||| ||||| ||||||||||||||| |||| |||| |||| ||| ||||||||||| | |||||||||| | |||  |||||||||| ||||||||    
T  89377 gtgttaactcgatcaaactcgtcaaaccttccaattttaccagaaatcgagtttaccttcaagttaacacgatattggtacctaaaaacttaaactcg 89280  T

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Target: scaffold1504 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 200
Target Start/End: Complemental strand, 1421 - 1314
Alignment:
Q  93 gtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgt 192  Q
    |||||||  ||||| |||| ||||||||||| |||| |||| |||| || | ||||||| |||||||| ||||||||||| | ||   ||||||||||||    
T  1421 gtttaacgagtgttaactcagtcaaactcgttaaaccttccaattttacaagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgt 1322  T
Q  193 aaactcgg 200  Q
    ||||||||    
T  1321 aaactcgg 1314  T

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Target: scaffold0383 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 16675 - 16754
Alignment:
Q  92 agtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacac 171  Q
    |||||| || ||||| |||| ||||||||||| |||| || |||||| |||| |||||||||||||||| ||||||||||    
T  16675 agtttaccaagtgttaactcagtcaaactcgttaaacctttcgattttaccagaaaccgagtttacctcagagttaacac 16754  T

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Target: scaffold0152 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 20911 - 20990
Alignment:
Q  92 agtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacac 171  Q
    |||||| || ||||| |||| ||||||||||| |||| || |||||| |||| |||||||||||||||| ||||||||||    
T  20911 agtttaccaagtgttaactcagtcaaactcgttaaacctttcgattttaccagaaaccgagtttacctcagagttaacac 20990  T

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Target: scaffold0152; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 28890 - 28811
Alignment:
Q  92 agtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacac 171  Q
    |||||| || ||||| |||| ||||||||||| |||| || |||||| |||| |||||||||||||||| ||||||||||    
T  28890 agtttaccaagtgttaactcagtcaaactcgttaaacctttcgattttaccagaaaccgagtttacctcagagttaacac 28811  T

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Target: scaffold0543 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 11070 - 10972
Alignment:
Q  102 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| |||| ||||||||||| |||| |||| |||| |||||||| ||| |||||||| ||||||||||| | ||   ||||||||| ||||||||||    
T  11070 gtgttaactcagtcaaactcgttaaaccttccaattttaccaaaaatcgaatttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgg 10972  T

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Target: scaffold0042 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 200
Target Start/End: Original strand, 57732 - 57818
Alignment:
Q  114 tcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    |||||||| | |||| ||| ||||| || | |||||||||||||||| ||||||||||| | ||   ||||||||||||||||||||    
T  57732 tcaaactcattaaaccttctgattttactagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcgg 57818  T

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Target: scaffold0573 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 200
Target Start/End: Complemental strand, 8931 - 8855
Alignment:
Q  124 caaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgttcttgccacctaaaaacgtaaactcgg 200  Q
    ||||| ||||||||| |||| ||| |||||||||||| ||||||||||| | |||  ||||||| | ||||||||||    
T  8931 caaaccttccgattttaccagaaatcgagtttacctcagagttaacacgattttggtacctaaacatgtaaactcgg 8855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 172
Target Start/End: Complemental strand, 15201 - 15137
Alignment:
Q  108 actcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacg 172  Q
    |||| ||||||||||| |||| |||| |||| |||| ||||||| |||||||| |||||||||||    
T  15201 actcagtcaaactcgttaaaccttccaattttaccataaaccgattttacctcagagttaacacg 15137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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