View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7321_low_37 (Length: 282)
Name: NF7321_low_37
Description: NF7321
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7321_low_37 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 1 - 282
Target Start/End: Complemental strand, 1060104 - 1059823
Alignment:
| Q |
1 |
agaaaactcaaatgccatatcttggtcattcatagggaaattagctataaattctaatttattttgtaatccnnnnnnnnntctgagatttcaaactata |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
1060104 |
agaaaactcaaatgccatatcttggtcattcatagggaaattagctataaattctaatttattttgtaatccaaaaaaaaatctgagatttcaaactata |
1060005 |
T |
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| Q |
101 |
tgaccaccgtattttgtaaattttaaataaaatgtttctgctttctttttcttcccctcttctcgtccacatcaagaattctatcgcaatgtacaataaa |
200 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |
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| T |
1060004 |
tgaccaccctattttgtaaattttaaataaaatgtttctgctttctttttcttcccctcttctcatccacagcaagaattctatcgcaatgtacaataaa |
1059905 |
T |
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| Q |
201 |
tacatgaaataaatgagatttatagttttatacccttagaagttacgaactgcggacctccctccaatggtaattaaggtga |
282 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1059904 |
tacatgaaataaatgagatttatagttttatacccttagaagttacgaactgcggacctccctccaatggtaattaaggtga |
1059823 |
T |
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