View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7323_high_12 (Length: 294)
Name: NF7323_high_12
Description: NF7323
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7323_high_12 |
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Alignment Details
Target: chr1 (Bit Score: 268; Significance: 1e-150; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 268; E-Value: 1e-150
Query Start/End: Original strand, 15 - 286
Target Start/End: Complemental strand, 31590138 - 31589867
Alignment:
| Q |
15 |
acatcacaactgccttctgactctattctctcagtgacgagcagtagattttctgattggcaggaaacaaagtggtacgcaacaggccatcagagtggtg |
114 |
Q |
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| T |
31590138 |
acatcacaactgccttctgactctattctctcagtgacgagcagtagattttctgattggcaggaaacaaagtggtacgcaacaggccatcagagtggtg |
31590039 |
T |
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| Q |
115 |
ctgtcaaagtgtggcaaatggttcactgctctgacccagatagctctctcagcaaatcaggtgcaggtgggttcagagtgttaaaccttggtgcaaaaga |
214 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
31590038 |
ctgtcaaagtgtggcaaatggttcactgctctgacccagatagctctctcagcaaatcaggtgcaagtgggttcagagtgttaaaccttggtgcaaaaga |
31589939 |
T |
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| Q |
215 |
gccagaatacagattgatcctacgcaaggtactcaagttccataagcatccggttactgctcttcatctcac |
286 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31589938 |
gccagaatacagattgatcctacgcaaggtactcaagttccataagcatccggttactgctcttcatctcac |
31589867 |
T |
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