View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7323_high_7 (Length: 350)
Name: NF7323_high_7
Description: NF7323
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7323_high_7 |
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Alignment Details
Target: chr4 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 7 - 333
Target Start/End: Original strand, 43578444 - 43578770
Alignment:
| Q |
7 |
agacattaattactatagtcatctcacttatatatcattctataaccactttttatttaatatgaggctttaacttgattgattattatgagaagtttaa |
106 |
Q |
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| T |
43578444 |
agacattaattactatagccatctcaattatatatcattctataaccactttttatttaatgtgaggctttaacttgattgattattatgagaagtttaa |
43578543 |
T |
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| Q |
107 |
aaattgaaaacgttctacttggataaatcacatgtgacaagtgttcgctactgtttctaataattttatgctatacagctgttgctaaatttgaattgtt |
206 |
Q |
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| T |
43578544 |
aaattgaaaacgttctacttggataattcacatgtgacaagagttctctactgtttctagtaattttatgctatacagctgttgctaaatttgaattgtt |
43578643 |
T |
|
| Q |
207 |
gattatgattgaaccaaggtgtctggaaattgttggttcagctaaagaatgcgacacatggattctaattctctgaaaacaggaatcagaatcttgttga |
306 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43578644 |
gattatgattgaaccaaggtgtctggaaattgttggttcagctaaagaatgcgacacatggattctaattctctgaaaacaggaatcagaatcttgttga |
43578743 |
T |
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| Q |
307 |
gttaaaacttatctgcctagctatcat |
333 |
Q |
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||||||||||||||||||||||||||| |
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| T |
43578744 |
gttaaaacttatctgcctagctatcat |
43578770 |
T |
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