View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7323_low_23 (Length: 265)

Name: NF7323_low_23
Description: NF7323
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7323_low_23
NF7323_low_23
[»] chr1 (39 HSPs)
chr1 (120-245)||(15435074-15435199)
chr1 (133-239)||(34878486-34878592)
chr1 (140-238)||(35484600-35484698)
chr1 (133-225)||(31983965-31984057)
chr1 (133-226)||(10776675-10776768)
chr1 (120-238)||(7337865-7337983)
chr1 (133-211)||(7836981-7837059)
chr1 (140-226)||(14872423-14872509)
chr1 (120-226)||(45415343-45415449)
chr1 (120-223)||(29738838-29738941)
chr1 (133-223)||(18939109-18939199)
chr1 (145-215)||(41176977-41177047)
chr1 (142-231)||(3228049-3228138)
chr1 (133-243)||(1742048-1742158)
chr1 (141-230)||(44915425-44915515)
chr1 (133-225)||(5983621-5983713)
chr1 (133-229)||(21686654-21686750)
chr1 (150-226)||(26535184-26535260)
chr1 (140-236)||(51916874-51916970)
chr1 (140-226)||(49626694-49626780)
chr1 (140-231)||(32679321-32679412)
chr1 (133-202)||(15836001-15836070)
chr1 (153-226)||(27456324-27456397)
chr1 (140-189)||(32394820-32394869)
chr1 (133-226)||(45789349-45789442)
chr1 (133-217)||(11462663-11462747)
chr1 (142-226)||(35462262-35462346)
chr1 (144-231)||(12634946-12635033)
chr1 (136-186)||(8212128-8212178)
chr1 (140-226)||(44543057-44543143)
chr1 (146-223)||(4413091-4413168)
chr1 (142-226)||(940149-940233)
chr1 (143-226)||(21947843-21947925)
chr1 (133-231)||(6218042-6218140)
chr1 (19-49)||(15434974-15435004)
chr1 (140-188)||(31692685-31692733)
chr1 (133-229)||(34413306-34413402)
chr1 (199-231)||(47132694-47132726)
chr1 (133-189)||(50377149-50377204)
[»] chr3 (47 HSPs)
chr3 (133-231)||(45568659-45568757)
chr3 (120-231)||(10232846-10232957)
chr3 (133-231)||(40487101-40487199)
chr3 (120-231)||(47895927-47896038)
chr3 (142-231)||(9998242-9998331)
chr3 (133-238)||(40556480-40556585)
chr3 (143-231)||(21431401-21431489)
chr3 (120-223)||(12050850-12050953)
chr3 (140-231)||(48650957-48651048)
chr3 (133-226)||(38545616-38545709)
chr3 (142-231)||(47042276-47042365)
chr3 (120-236)||(32701269-32701385)
chr3 (143-231)||(35865158-35865246)
chr3 (144-231)||(10108014-10108101)
chr3 (120-238)||(6954898-6955016)
chr3 (142-231)||(10229250-10229339)
chr3 (170-238)||(43488849-43488917)
chr3 (140-234)||(7449124-7449217)
chr3 (140-234)||(7457266-7457359)
chr3 (120-226)||(33579649-33579755)
chr3 (140-238)||(36461653-36461751)
chr3 (120-221)||(9797732-9797830)
chr3 (120-226)||(21534012-21534116)
chr3 (133-231)||(31272021-31272120)
chr3 (140-241)||(50194505-50194606)
chr3 (143-231)||(52923340-52923428)
chr3 (148-231)||(43016631-43016714)
chr3 (140-226)||(629128-629214)
chr3 (142-226)||(953631-953715)
chr3 (191-238)||(20988028-20988075)
chr3 (140-219)||(26276015-26276094)
chr3 (143-189)||(20465192-20465238)
chr3 (140-202)||(54148793-54148855)
chr3 (172-225)||(9688488-9688541)
chr3 (140-238)||(29921820-29921920)
chr3 (140-238)||(29970973-29971073)
chr3 (154-214)||(37040575-37040635)
chr3 (196-231)||(1803246-1803281)
chr3 (133-220)||(7546397-7546484)
chr3 (133-231)||(21290034-21290132)
chr3 (196-226)||(53808140-53808170)
chr3 (140-189)||(4821625-4821674)
chr3 (197-238)||(36910934-36910975)
chr3 (140-236)||(23800131-23800230)
chr3 (133-161)||(29239184-29239212)
chr3 (170-226)||(29249024-29249080)
chr3 (143-226)||(46220459-46220543)
[»] chr8 (34 HSPs)
chr8 (120-231)||(31013771-31013882)
chr8 (132-231)||(10377475-10377574)
chr8 (136-226)||(27110680-27110770)
chr8 (133-226)||(25191279-25191372)
chr8 (143-226)||(17693836-17693919)
chr8 (142-235)||(8412571-8412664)
chr8 (140-233)||(45446031-45446124)
chr8 (120-218)||(37971086-37971181)
chr8 (140-226)||(8980980-8981066)
chr8 (140-223)||(23230430-23230512)
chr8 (123-225)||(15344090-15344192)
chr8 (123-225)||(15433155-15433257)
chr8 (123-225)||(15524459-15524561)
chr8 (143-219)||(3673236-3673312)
chr8 (120-219)||(7677480-7677579)
chr8 (120-226)||(20559944-20560050)
chr8 (120-226)||(20571506-20571612)
chr8 (136-226)||(28897494-28897584)
chr8 (143-224)||(7883463-7883544)
chr8 (133-226)||(20553458-20553551)
chr8 (142-219)||(33214853-33214930)
chr8 (140-231)||(14545123-14545215)
chr8 (140-232)||(29617677-29617769)
chr8 (142-226)||(40211528-40211612)
chr8 (140-226)||(1236913-1236999)
chr8 (133-235)||(8867603-8867705)
chr8 (143-227)||(24099484-24099567)
chr8 (143-219)||(29937905-29937981)
chr8 (142-189)||(8443743-8443789)
chr8 (133-184)||(8826033-8826084)
chr8 (142-221)||(41684221-41684300)
chr8 (150-220)||(27498565-27498635)
chr8 (171-225)||(36948688-36948742)
chr8 (177-229)||(41060482-41060534)
[»] chr6 (21 HSPs)
chr6 (120-238)||(12170265-12170383)
chr6 (120-231)||(33053370-33053481)
chr6 (133-231)||(3913789-3913886)
chr6 (143-238)||(68225-68320)
chr6 (142-230)||(24227936-24228024)
chr6 (135-226)||(605986-606077)
chr6 (136-231)||(29255660-29255755)
chr6 (120-226)||(29320064-29320173)
chr6 (140-231)||(32328805-32328896)
chr6 (120-238)||(23128388-23128506)
chr6 (142-226)||(9723602-9723687)
chr6 (120-218)||(30894427-30894524)
chr6 (169-238)||(9721761-9721830)
chr6 (136-189)||(32191950-32192003)
chr6 (133-229)||(32059688-32059784)
chr6 (142-225)||(7515426-7515509)
chr6 (169-219)||(9719643-9719693)
chr6 (133-225)||(4010715-4010807)
chr6 (120-220)||(34018348-34018448)
chr6 (133-231)||(1523185-1523283)
chr6 (142-226)||(27097834-27097918)
[»] chr5 (26 HSPs)
chr5 (140-238)||(7035996-7036094)
chr5 (120-238)||(13006997-13007115)
chr5 (120-238)||(38597566-38597684)
chr5 (140-226)||(6012360-6012446)
chr5 (140-221)||(38007143-38007224)
chr5 (140-231)||(25979933-25980024)
chr5 (133-220)||(26878294-26878380)
chr5 (120-226)||(31391959-31392065)
chr5 (142-231)||(26825204-26825293)
chr5 (133-224)||(34945204-34945295)
chr5 (142-231)||(15571261-15571350)
chr5 (133-226)||(7929979-7930068)
chr5 (120-215)||(9113927-9114022)
chr5 (152-231)||(11977171-11977250)
chr5 (140-224)||(6216676-6216761)
chr5 (150-238)||(24230018-24230107)
chr5 (143-217)||(11074124-11074199)
chr5 (133-231)||(14211009-14211106)
chr5 (133-231)||(39567071-39567169)
chr5 (171-238)||(13421711-13421779)
chr5 (133-217)||(35850574-35850657)
chr5 (175-231)||(41630286-41630342)
chr5 (196-238)||(8985215-8985257)
chr5 (152-217)||(4770927-4770992)
chr5 (19-48)||(9113824-9113853)
chr5 (134-231)||(28541122-28541219)
[»] chr4 (38 HSPs)
chr4 (120-226)||(2520578-2520684)
chr4 (133-227)||(26091128-26091222)
chr4 (133-238)||(26633885-26633990)
chr4 (143-239)||(22610972-22611068)
chr4 (120-231)||(4142956-4143067)
chr4 (133-226)||(10496143-10496236)
chr4 (143-231)||(19853736-19853824)
chr4 (140-225)||(22558687-22558772)
chr4 (143-231)||(13633910-13633998)
chr4 (147-235)||(56156782-56156870)
chr4 (140-231)||(53810824-53810915)
chr4 (133-219)||(9178165-9178251)
chr4 (140-226)||(54021662-54021748)
chr4 (140-236)||(22300636-22300732)
chr4 (142-245)||(5119120-5119223)
chr4 (133-231)||(48257664-48257762)
chr4 (142-219)||(9165267-9165344)
chr4 (142-226)||(33920853-33920937)
chr4 (143-238)||(21686465-21686560)
chr4 (133-231)||(35348102-35348200)
chr4 (140-236)||(21662276-21662371)
chr4 (140-236)||(21671040-21671135)
chr4 (170-238)||(51024713-51024781)
chr4 (133-216)||(43510010-43510093)
chr4 (120-237)||(45418319-45418433)
chr4 (140-231)||(51888438-51888529)
chr4 (142-227)||(36204604-36204689)
chr4 (140-235)||(29961151-29961246)
chr4 (143-225)||(53443928-53444010)
chr4 (142-231)||(24099295-24099384)
chr4 (133-225)||(22039013-22039105)
chr4 (135-231)||(27651744-27651840)
chr4 (120-231)||(32766309-32766421)
chr4 (152-238)||(1621719-1621805)
chr4 (196-226)||(9643178-9643208)
chr4 (140-226)||(47320623-47320709)
chr4 (142-231)||(9713697-9713786)
chr4 (133-238)||(18935576-18935681)
[»] chr2 (34 HSPs)
chr2 (120-238)||(4778532-4778650)
chr2 (120-231)||(7646258-7646369)
chr2 (120-238)||(12677498-12677616)
chr2 (120-221)||(7678080-7678181)
chr2 (133-238)||(27097620-27097725)
chr2 (142-226)||(1421462-1421546)
chr2 (120-231)||(7448034-7448145)
chr2 (120-231)||(31788242-31788353)
chr2 (133-238)||(35220110-35220212)
chr2 (133-231)||(4098889-4098987)
chr2 (133-231)||(36943339-36943437)
chr2 (133-238)||(43397334-43397439)
chr2 (120-220)||(18763265-18763365)
chr2 (134-223)||(5428084-5428173)
chr2 (143-227)||(9169482-9169566)
chr2 (120-231)||(11985432-11985543)
chr2 (144-226)||(31128974-31129056)
chr2 (133-213)||(37876813-37876893)
chr2 (141-231)||(29279794-29279883)
chr2 (171-230)||(42698928-42698987)
chr2 (139-225)||(41694407-41694493)
chr2 (133-218)||(24461238-24461323)
chr2 (143-226)||(8809073-8809156)
chr2 (152-226)||(36691657-36691732)
chr2 (140-226)||(4904358-4904444)
chr2 (196-238)||(23933869-23933911)
chr2 (140-226)||(32448843-32448929)
chr2 (143-189)||(36175666-36175712)
chr2 (120-202)||(38444982-38445063)
chr2 (142-226)||(28871987-28872069)
chr2 (143-226)||(37416493-37416576)
chr2 (133-226)||(18107951-18108044)
chr2 (142-231)||(25509291-25509379)
chr2 (171-219)||(4042230-4042278)
[»] scaffold0127 (1 HSPs)
scaffold0127 (120-238)||(15261-15379)
[»] chr7 (27 HSPs)
chr7 (120-226)||(19404956-19405062)
chr7 (133-226)||(42978391-42978484)
chr7 (133-231)||(9450352-9450450)
chr7 (140-225)||(12141530-12141615)
chr7 (120-231)||(8013667-8013778)
chr7 (120-218)||(37837660-37837758)
chr7 (120-233)||(30757021-30757134)
chr7 (140-225)||(48061206-48061291)
chr7 (120-226)||(34899809-34899912)
chr7 (120-220)||(48317014-48317114)
chr7 (140-231)||(4529857-4529948)
chr7 (120-231)||(19296656-19296767)
chr7 (120-231)||(39171794-39171905)
chr7 (143-238)||(47590085-47590180)
chr7 (120-238)||(13797133-13797251)
chr7 (142-238)||(39329017-39329113)
chr7 (140-235)||(25287403-25287498)
chr7 (133-227)||(5078608-5078702)
chr7 (140-231)||(40992960-40993050)
chr7 (143-226)||(3224642-3224725)
chr7 (171-226)||(45350445-45350500)
chr7 (142-212)||(9915941-9916011)
chr7 (142-212)||(9923853-9923923)
chr7 (197-238)||(24350695-24350737)
chr7 (20-49)||(19404857-19404886)
chr7 (144-209)||(24770055-24770120)
chr7 (133-189)||(22087137-22087193)
[»] scaffold0884 (1 HSPs)
scaffold0884 (120-225)||(2174-2279)
[»] scaffold0026 (1 HSPs)
scaffold0026 (133-238)||(72079-72184)
[»] scaffold0445 (1 HSPs)
scaffold0445 (133-231)||(1120-1218)
[»] scaffold0219 (1 HSPs)
scaffold0219 (133-221)||(15053-15141)
[»] scaffold0017 (1 HSPs)
scaffold0017 (140-231)||(32970-33061)
[»] scaffold0088 (1 HSPs)
scaffold0088 (120-238)||(50555-50673)
[»] scaffold0262 (1 HSPs)
scaffold0262 (142-222)||(2041-2121)
[»] scaffold0064 (1 HSPs)
scaffold0064 (143-231)||(19261-19348)
[»] scaffold0009 (1 HSPs)
scaffold0009 (140-226)||(58301-58387)
[»] scaffold0603 (1 HSPs)
scaffold0603 (133-225)||(7500-7591)
[»] scaffold0554 (1 HSPs)
scaffold0554 (144-214)||(10672-10742)
[»] scaffold0087 (1 HSPs)
scaffold0087 (140-238)||(25551-25649)
[»] scaffold0492 (1 HSPs)
scaffold0492 (133-202)||(12721-12790)


Alignment Details
Target: chr1 (Bit Score: 86; Significance: 3e-41; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 120 - 245
Target Start/End: Original strand, 15435074 - 15435199
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  ||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  15435074 tgtagagggttgattctagatcaaaaaatgacctaaaaccgcccctccttgatgaatgaagaagaaagaaggttttgagagaagttggagtttctctcaa 15435173  T
Q  220 taaaaaattaggaccggctcaagatt 245  Q
    ||||||| |||  |||||||||||||    
T  15435174 taaaaaactagagccggctcaagatt 15435199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 133 - 239
Target Start/End: Original strand, 34878486 - 34878592
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagga 232  Q
    |||||| |||||||||||||||||||||| |||||| |||||| ||| ||||||||| ||||  ||||||||||||||||||||||||| |||| ||||     
T  34878486 ttctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaagagaaagaaagtttaaagagaagttggagtttctctcactagaaaactaggg 34878585  T
Q  233 ccggctc 239  Q
    |||||||    
T  34878586 ccggctc 34878592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 35484600 - 35484698
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggct 238  Q
    ||||||||||||||| |||||| |||||| |||||| ||||||||||||| |||| |||||||||||||||||||||||||| |||| |||| ||||||    
T  35484600 tcaaaaaatgacctacaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctcactagaaaactagggccggct 35484698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 133 - 225
Target Start/End: Complemental strand, 31984057 - 31983965
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 225  Q
    |||||| ||||||||||||||||||||||  ||||||||||||  ||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  31984057 ttctaggtcaaaaaatgacctaaaaccacctctccttgatgaacaaagaagaaagaaagtttagagagaagttggagtttctctcactaaaaa 31983965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 226
Target Start/End: Original strand, 10776675 - 10776768
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    |||||| ||||||||||| |||||||||| | |||| |||||||||||||||||||| |||| ||||||| |||||||||||||| ||||||||    
T  10776675 ttctaggtcaaaaaatgatctaaaaccacccttcctcgatgaatgaaggagaaagaaagtttagagagaaattggagtttctctccctaaaaaa 10776768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 120 - 238
Target Start/End: Original strand, 7337865 - 7337983
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  ||||||||||||||||||| || |||||  |||||| |||||| ||||||||||||| |||| ||||||||||| ||||||| ||||    
T  7337865 tgtagaggggtgattctagatcaaaaaatgacatagaaccatccctcctcgatgaacgaaggagaaagaaagtttagagagaagttgaagtttctttcac 7337964  T
Q  220 taaaaaattaggaccggct 238  Q
    || |||| |||| ||||||    
T  7337965 tagaaaactagggccggct 7337983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 133 - 211
Target Start/End: Original strand, 7836981 - 7837059
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtt 211  Q
    ||||||||||||||||||||||||||||| | |||| |||||| ||| |||||||||||||| ||||||||||||||||    
T  7836981 ttctagatcaaaaaatgacctaaaaccacccttcctcgatgaacgaaagagaaagaaggtttagagagaagttggagtt 7837059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 14872509 - 14872423
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    ||||||||||||| |||||||||||| || ||||||||||| |||||||| |||  || ||||||||||||||||||||||||||||    
T  14872509 tcaaaaaatgaccgaaaaccacaccttctcgatgaatgaagaagaaagaaagttcagaaagaagttggagtttctctcactaaaaaa 14872423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 120 - 226
Target Start/End: Complemental strand, 45415449 - 45415343
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  ||||||||||||||||||||||||||||| |||||| ||| || |||| |||||||| ||||  |||||||||| ||||||||||||    
T  45415449 tgtagaggggtgattctagatcaaaaaatgacctaaaaccacccctcctcgataaacgaagaagaaagaaagtttaaagagaagttgaagtttctctcac 45415350  T
Q  220 taaaaaa 226  Q
    || ||||    
T  45415349 tagaaaa 45415343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 120 - 223
Target Start/End: Original strand, 29738838 - 29738941
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| | ||||| |||||||||||||| |||||| |||||| ||||||||||||| |||| |||||| ||||||||||||||| |    
T  29738838 tgtagaggggtgattctaggtaaaaaattgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagatgttggagtttctctctc 29738937  T
Q  220 taaa 223  Q
    ||||    
T  29738938 taaa 29738941  T

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Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 223
Target Start/End: Complemental strand, 18939199 - 18939109
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaa 223  Q
    |||||||||||||||||||||||||||||  ||||| ||| ||||||||||||||||   || |||||||| || ||||||||||||||||    
T  18939199 ttctagatcaaaaaatgacctaaaaccacctctcctcgattaatgaaggagaaagaaaacttagagagaaggtgaagtttctctcactaaa 18939109  T

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Target: chr1; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 215
Target Start/End: Complemental strand, 41177047 - 41176977
Alignment:
Q  145 aaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctc 215  Q
    ||||||||||||||||| |||||| |||||| ||||||||||||| |||| ||||||||||||||||||||    
T  41177047 aaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctc 41176977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 231
Target Start/End: Complemental strand, 3228138 - 3228049
Alignment:
Q  142 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||  ||| | ||||||||||||||| ||| |||| |||| ||||    
T  3228138 aaaaaatgacctaaaaccacccctccttgatgaatgaaggagaaataaaatttagggagaagttggagtttttctaactagaaaactagg 3228049  T

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Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 243
Target Start/End: Complemental strand, 1742158 - 1742048
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagga 232  Q
    |||||| ||||||||||||||||||||||   ||||||||||| ||| ||||||| | |||| || ||||||| ||||||||||||||| |||| || |     
T  1742158 ttctaggtcaaaaaatgacctaaaaccaccattccttgatgaacgaaagagaaaggaagtttagaaagaagtttgagtttctctcactagaaaactaagg 1742059  T
Q  233 ccggctcaaga 243  Q
    |||||| ||||    
T  1742058 ccggctgaaga 1742048  T

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Target: chr1; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 141 - 230
Target Start/End: Complemental strand, 44915515 - 44915425
Alignment:
Q  141 caaaaaatgacctaaaacca-cacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattag 230  Q
    |||||||||||||||||||| | |||||| |||||||||| ||||||||| |||| ||||||||||| | ||| |||||||| ||||||||    
T  44915515 caaaaaatgacctaaaaccaacccctcctcgatgaatgaatgagaaagaaagtttagagagaagttgaaatttttctcactagaaaattag 44915425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 133 - 225
Target Start/End: Complemental strand, 5983713 - 5983621
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 225  Q
    |||||| ||||||||||| |||||||||  |||||| |||||| |||||||||| || |||| ||||||||||  |||||||||| |||||||    
T  5983713 ttctaggtcaaaaaatgatctaaaaccatccctcctcgatgaacgaaggagaaataaagtttagagagaagttaaagtttctctctctaaaaa 5983621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 133 - 229
Target Start/End: Complemental strand, 21686750 - 21686654
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaatta 229  Q
    ||||||||||||||||||||||||| ||   ||||| |||||| ||| |||||||||  ||| || | |||||| ||||||||||||||||||||||    
T  21686750 ttctagatcaaaaaatgacctaaaatcatctctcctcgatgaacgaaagagaaagaaaatttagaaaaaagttgcagtttctctcactaaaaaatta 21686654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 26535260 - 26535184
Alignment:
Q  150 acctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    |||||||||||| | ||||||||||| |||||||| |||| |||| |||||||||| ||||||||||||||| ||||    
T  26535260 acctaaaaccactcatccttgatgaacgaaggagagagaaagtttagagagaagttagagtttctctcactagaaaa 26535184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 236
Target Start/End: Original strand, 51916874 - 51916970
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccgg 236  Q
    |||||||||  ||||||||||| ||||||  ||||| ||||||||||||| |||| |||| || ||| ||||||||||||||||||| |||| ||||    
T  51916874 tcaaaaaatagcctaaaaccacccctcctctatgaacgaaggagaaagaaagtttagagaaaaattgaagtttctctcactaaaaaactagggccgg 51916970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 49626780 - 49626694
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    ||||| |||||||||||||||| |||||| ||||| |||| ||||| |||   || |||||||||||||||||||||||| ||||||    
T  49626780 tcaaagaatgacctaaaaccacccctcctcgatgagtgaaagagaaggaacacttagagagaagttggagtttctctcacaaaaaaa 49626694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 231
Target Start/End: Original strand, 32679321 - 32679412
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    |||||||||||| ||||||||| |||||| || || |||| |||||||||   || |||| |||||||| ||||||||||||||||| ||||    
T  32679321 tcaaaaaatgacataaaaccacccctcctcgacgagtgaaagagaaagaaaacttagagaaaagttggaatttctctcactaaaaaactagg 32679412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 15836070 - 15836001
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaa 202  Q
    |||||| ||||||||||||||||||||||  ||||||||||||| || ||||||||| |||  |||||||    
T  15836070 ttctaggtcaaaaaatgacctaaaaccacctctccttgatgaatcaaagagaaagaaagttaagagagaa 15836001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 226
Target Start/End: Complemental strand, 27456397 - 27456324
Alignment:
Q  153 taaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    ||||||||  |||||| || ||||||||||||||||| |||| || |||||||| ||||| |||||||||||||    
T  27456397 taaaaccatccctcctcgacgaatgaaggagaaagaaagtttagaaagaagttgaagtttttctcactaaaaaa 27456324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 189
Target Start/End: Complemental strand, 32394869 - 32394820
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaa 189  Q
    |||||||||||||||||||||| |||||| |||||| |||||||||||||    
T  32394869 tcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaa 32394820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 226
Target Start/End: Complemental strand, 45789442 - 45789349
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    |||||| |||||||||||||||||||||    |||| ||||||||||| ||||| ||  ||| |||||||  | ||||||||||||||||||||    
T  45789442 ttctaggtcaaaaaatgacctaaaaccatcaatcctcgatgaatgaagtagaaataaaatttagagagaacgtagagtttctctcactaaaaaa 45789349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 217
Target Start/End: Original strand, 11462663 - 11462747
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctc 217  Q
    |||||| ||||||||| |||||||| ||| |||| |  ||||| ||||||||||||| |||| ||||||| ||| ||||||||||    
T  11462663 ttctaggtcaaaaaataacctaaaatcacccctcgtcaatgaacgaaggagaaagaaagtttagagagaaattgaagtttctctc 11462747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 226
Target Start/End: Original strand, 35462262 - 35462346
Alignment:
Q  142 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    |||||||||||||||||||| | | ||  || || ||||||||||||| |||| |||| ||||| ||||||||| ||||||||||    
T  35462262 aaaaaatgacctaaaaccacccattctcaataaacgaaggagaaagaaagtttagagataagttagagtttctcccactaaaaaa 35462346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 231
Target Start/End: Complemental strand, 12635033 - 12634946
Alignment:
Q  144 aaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    |||||||||||||||||||| |||| || || |||| |||||| ||    | |||||||||| |||||||||||||||||||| ||||    
T  12635033 aaaatgacctaaaaccacacatcctcgacgagtgaaagagaaaaaaaacatagagagaagtttgagtttctctcactaaaaaactagg 12634946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 8212128 - 8212178
Alignment:
Q  136 tagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaa 186  Q
    ||||||||||||| | |||||| ||| ||||||||||||||||||||||||    
T  8212128 tagatcaaaaaataatctaaaagcacccctccttgatgaatgaaggagaaa 8212178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 44543143 - 44543057
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    ||||| ||| |||||||| ||| | |||| ||||| |||| ||||| |||   || |||||||||||||||||||||||||||||||    
T  44543143 tcaaagaataacctaaaagcacccttcctcgatgagtgaaagagaaggaaaacttagagagaagttggagtttctctcactaaaaaa 44543057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 223
Target Start/End: Complemental strand, 4413168 - 4413091
Alignment:
Q  146 aatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaa 223  Q
    ||||||||||||| || |||||| ||| || |||| |||||||| |||| |||| ||||| ||||||||||| |||||    
T  4413168 aatgacctaaaactactcctcctcgataaacgaagaagaaagaaagtttagagaaaagttagagtttctctctctaaa 4413091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 226
Target Start/End: Complemental strand, 940233 - 940149
Alignment:
Q  142 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    |||||||||| ||||||||| | |||| ||||||  || |||||||||  ||| ||||||| || |||||| |||||||||||||    
T  940233 aaaaaatgacttaaaaccactcatcctcgatgaagaaaagagaaagaaaatttagagagaatttagagtttttctcactaaaaaa 940149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 226
Target Start/End: Original strand, 21947843 - 21947925
Alignment:
Q  143 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    |||||| |||||||||||| | |||| |||||| |||| |||||||| |||| |||| || ||| |||||||||||||| ||||    
T  21947843 aaaaataacctaaaaccacccatcctcgatgaacgaag-agaaagaaagtttagagaaaaattgaagtttctctcactagaaaa 21947925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 231
Target Start/End: Original strand, 6218042 - 6218140
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    |||||| ||||||||||| |||||| ||   ||||||||||| | || || |||||   ||  ||||||||||||| |||| |||||||||||||||||    
T  6218042 ttctaggtcaaaaaatgaactaaaatcatctctccttgatgagttaatgaaaaagataattaagagagaagttggaatttccctcactaaaaaattagg 6218140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 49
Target Start/End: Original strand, 15434974 - 15435004
Alignment:
Q  19 cagaacgccgcacttagacgacgaaatcact 49  Q
    |||||||||||||||||||||||||||||||    
T  15434974 cagaacgccgcacttagacgacgaaatcact 15435004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 188
Target Start/End: Original strand, 31692685 - 31692733
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaaga 188  Q
    |||||||||||||||||| ||||| |||| ||||| |||| ||||||||    
T  31692685 tcaaaaaatgacctaaaatcacacatcctcgatgagtgaaagagaaaga 31692733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 229
Target Start/End: Original strand, 34413306 - 34413402
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaatta 229  Q
    |||||||| ||||| |||||||||| ||| ||| || ||| | |||| |||||| ||   || ||||||||   |||||||||||||||||||||||    
T  34413306 ttctagataaaaaattgacctaaaatcacccctactcgataagtgaaagagaaaaaaaacttagagagaaggcagagtttctctcactaaaaaatta 34413402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 231
Target Start/End: Complemental strand, 47132726 - 47132694
Alignment:
Q  199 agaagttggagtttctctcactaaaaaattagg 231  Q
    |||||||||||||||||||||||||||| ||||    
T  47132726 agaagttggagtttctctcactaaaaaactagg 47132694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 50377204 - 50377149
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaa 189  Q
    |||||| |||||||||||||||||||||  |||| | |||||| |||||||||||||    
T  50377204 ttctaggtcaaaaaatgacctaaaacca-tcctcttcgatgaacgaaggagaaagaa 50377149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 3e-32; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 133 - 231
Target Start/End: Original strand, 45568659 - 45568757
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||| |||| |||||||||||||||||||||||||| |||| ||||    
T  45568659 ttctagatcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctcactagaaaactagg 45568757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 120 - 231
Target Start/End: Complemental strand, 10232957 - 10232846
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||| |||| |||||||||||||||||||| |||    
T  10232957 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctccttgatgaacgaaggagaaagaaagtttagagagaagttggagtttctcccac 10232858  T
Q  220 taaaaaattagg 231  Q
    || |||| ||||    
T  10232857 tagaaaactagg 10232846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 133 - 231
Target Start/End: Complemental strand, 40487199 - 40487101
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    |||||| |||||||||||||||||| ||| |||||| |||||| ||||||||||||| |||| |||||||||||||||||||||||||| |||||||||    
T  40487199 ttctaggtcaaaaaatgacctaaaatcacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctcactagaaaattagg 40487101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 120 - 231
Target Start/End: Complemental strand, 47896038 - 47895927
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| ||||||||||| ||| |||||| |||||| |||||| ||||||||||||| |||| ||||||||||||||||||||||||    
T  47896038 tgtagaggggtgattctaggtcaaaaaatgatctataaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctcac 47895939  T
Q  220 taaaaaattagg 231  Q
    || |||| ||||    
T  47895938 tagaaaactagg 47895927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 142 - 231
Target Start/End: Complemental strand, 9998331 - 9998242
Alignment:
Q  142 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||||| |||| |||||||||||||||||||| ||||| |||| ||||    
T  9998331 aaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctcccactagaaaactagg 9998242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 238
Target Start/End: Complemental strand, 40556585 - 40556480
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagga 232  Q
    |||||| |||||||||||||||||||||| |||||| |||||| ||| ||||||||| |||| || ||||||||||||||||| ||||| |||| ||||     
T  40556585 ttctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaatgagaaagaaagtttagaaagaagttggagtttctcccactagaaaactaggg 40556486  T
Q  233 ccggct 238  Q
    ||||||    
T  40556485 ccggct 40556480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 143 - 231
Target Start/End: Complemental strand, 21431489 - 21431401
Alignment:
Q  143 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    ||||||||||||||||||| |||||| |||||| ||||||||||||| |||| |||||||||||||||||||| ||||| |||| ||||    
T  21431489 aaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctcccactagaaaactagg 21431401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 120 - 223
Target Start/End: Original strand, 12050850 - 12050953
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  ||||| |||||||||| || ||||||||||| ||||||||||| |||||||||||||  ||| |||||||||||||||||||||| |    
T  12050850 tgtagaggggtgattctaaatcaaaaaataacttaaaaccacacatccttgatgaacgaaggagaaagaaaatttagagagaagttggagtttctctctc 12050949  T
Q  220 taaa 223  Q
    ||||    
T  12050950 taaa 12050953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 140 - 231
Target Start/End: Original strand, 48650957 - 48651048
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    |||||||||||||||||||||| |||||| |||||| || |||||||||| |||| ||||||||||||||||||| |||||| |||| ||||    
T  48650957 tcaaaaaatgacctaaaaccacccctcctcgatgaacgatggagaaagaaagtttagagagaagttggagtttctttcactagaaaactagg 48651048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 133 - 226
Target Start/End: Complemental strand, 38545709 - 38545616
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    |||||| ||||||||||||||||||||||  |||||  ||||| ||||||||||||| |||| ||||||||||| |||||||||||||| ||||    
T  38545709 ttctaggtcaaaaaatgacctaaaaccaccactcctcaatgaacgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaaa 38545616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 142 - 231
Target Start/End: Original strand, 47042276 - 47042365
Alignment:
Q  142 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    |||||||||||||||||||| |||||| |||||| |||||| ||| || |||| ||||||||||||||||||| |||||| |||||||||    
T  47042276 aaaaaatgacctaaaaccacccctcctcgatgaacgaaggataaataaagtttagagagaagttggagtttctttcactagaaaattagg 47042365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 236
Target Start/End: Complemental strand, 32701385 - 32701269
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| |||||||||||||||||||||| || ||| |||||| ||||||||||||| ||||  ||||||||||||||||||  |||    
T  32701385 tgtagagggatgattctaggtcaaaaaatgacctaaaaccaccccacctcgatgaacgaaggagaaagaaagtttaaagagaagttggagtttcttccac 32701286  T
Q  220 taaaaaattaggaccgg 236  Q
    || |||| |||| ||||    
T  32701285 tagaaaactagggccgg 32701269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 143 - 231
Target Start/End: Original strand, 35865158 - 35865246
Alignment:
Q  143 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    ||||||||||||||||||| |||||| || ||| ||||||||||||| |||| ||||||||||| |||||||||||||| |||| ||||    
T  35865158 aaaaatgacctaaaaccacccctcctcgaggaacgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaaactagg 35865246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 144 - 231
Target Start/End: Complemental strand, 10108101 - 10108014
Alignment:
Q  144 aaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    |||||||||||||||||| |||||| ||||||  |||||||||||| |||| |||||||||||||||||||| ||||| |||| ||||    
T  10108101 aaaatgacctaaaaccacccctcctcgatgaacaaaggagaaagaaagtttagagagaagttggagtttctcccactagaaaactagg 10108014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 120 - 238
Target Start/End: Original strand, 6954898 - 6955016
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| |||||||||||||||||| ||| ||||||   |||| ||||||||||||| |||| |||||||||||||||||||  |||    
T  6954898 tgtagaggggtgattctaggtcaaaaaatgacctaaaatcacccctcctcagtgaacgaaggagaaagaaagtttagagagaagttggagtttcttccac 6954997  T
Q  220 taaaaaattaggaccggct 238  Q
    || |||| |||| ||||||    
T  6954998 tagaaaactagggccggct 6955016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 231
Target Start/End: Complemental strand, 10229339 - 10229250
Alignment:
Q  142 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    |||||| ||||||||||||| |||||| |||||| ||||||||||||| |||| ||||||| |||||||||||| ||||| |||| ||||    
T  10229339 aaaaaaagacctaaaaccacccctcctcgatgaaagaaggagaaagaaagtttagagagaaattggagtttctcccactagaaaactagg 10229250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 43488849 - 43488917
Alignment:
Q  170 gatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggct 238  Q
    |||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||    
T  43488849 gatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactaaaaaactagggccggct 43488917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 234
Target Start/End: Original strand, 7449124 - 7449217
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggacc 234  Q
    |||||||||||||||||||||  ||||||| ||||| ||| |||||| || |||| ||||||||||||||||||||||| || |||| |||||||    
T  7449124 tcaaaaaatgacctaaaaccagccctccttaatgaacgaaagagaaaaaaagttt-gagagaagttggagtttctctcattagaaaactaggacc 7449217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 234
Target Start/End: Original strand, 7457266 - 7457359
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggacc 234  Q
    |||||||||||||||||||||  ||||||| ||||| ||| |||||| || |||| ||||||||||||||||||||||| || |||| |||||||    
T  7457266 tcaaaaaatgacctaaaaccagccctccttaatgaacgaaagagaaaaaaagttt-gagagaagttggagtttctctcattagaaaactaggacc 7457359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 120 - 226
Target Start/End: Complemental strand, 33579755 - 33579649
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| |||||||||||| ||||||||| | || | |||||| |||||| |||||| |||| ||||||||||| ||||||||||||    
T  33579755 tgtagaggggtgattctaggtcaaaaaatgacttaaaaccacccttcttcgatgaacgaaggataaagaaagtttagagagaagttgaagtttctctcac 33579656  T
Q  220 taaaaaa 226  Q
    || ||||    
T  33579655 tagaaaa 33579649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 36461653 - 36461751
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggct 238  Q
    |||||||||||||||||||||| | |||| |||||| ||||||||||||| |||| |||||||  || |||||||| ||||| |||| |||| ||||||    
T  36461653 tcaaaaaatgacctaaaaccactcatcctcgatgaacgaaggagaaagaaagtttagagagaatatgaagtttctcacactagaaaactagggccggct 36461751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 221
Target Start/End: Original strand, 9797732 - 9797830
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| ||||||||||||||||||||||  |||    ||||| |||||||||| || |||| ||||||||||||||||||||||||    
T  9797732 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacctctca---atgaacgaaggagaaataaagtttagagagaagttggagtttctctcac 9797828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 226
Target Start/End: Original strand, 21534012 - 21534116
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| |||||||  ||||||||||||| | |||| ||| || ||||||||||||| |||| ||||||| || |||||||||||||    
T  21534012 tgtagaggggtgattctaggtcaaaaa--gacctaaaaccacccatcctcgattaacgaaggagaaagaaagtttagagagaaattagagtttctctcac 21534109  T
Q  220 taaaaaa 226  Q
    |||||||    
T  21534110 taaaaaa 21534116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 133 - 231
Target Start/End: Original strand, 31272021 - 31272120
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacc-tccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    |||||| | ||||||| |||||||| |||||| |||| |||||| |||||| ||||||   || |||||||||||||||||||||||||| |||||||||    
T  31272021 ttctaggttaaaaaataacctaaaatcacaccctcctcgatgaacgaaggaaaaagaaaacttagagagaagttggagtttctctcactagaaaattagg 31272120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 241
Target Start/End: Original strand, 50194505 - 50194606
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggctc 239  Q
    ||||||||||| |||||||||| ||| || || || |||| ||||| |||   || ||||||||||||||||||||||||||||||| ||||  ||||||    
T  50194505 tcaaaaaatgatctaaaaccactccttctcgacgagtgaaagagaacgaaaacttagagagaagttggagtttctctcactaaaaaactagggtcggctc 50194604  T
Q  240 aa 241  Q
    ||    
T  50194605 aa 50194606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 231
Target Start/End: Original strand, 52923340 - 52923428
Alignment:
Q  143 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    ||||||||| |||||| ||  |||||  ||||| ||||||||||||| |||| |||||||||||||||||||  |||||||||| ||||    
T  52923340 aaaaatgacttaaaactacctctcctcaatgaacgaaggagaaagaaagtttagagagaagttggagtttcttccactaaaaaaatagg 52923428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 43016714 - 43016631
Alignment:
Q  148 tgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    |||||||||||||| | |||| |||||| ||| |||||||||  ||| |||||||||| ||||||||||||||| |||| ||||    
T  43016714 tgacctaaaaccacccttcctcgatgaacgaaagagaaagaaaatttagagagaagttagagtttctctcactagaaaactagg 43016631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 629128 - 629214
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    ||||| |||||||||||||||| |||||| ||||| |||| | ||| |||   || |||||||||| ||||||||||||||||||||    
T  629128 tcaaagaatgacctaaaaccacccctcctcgatgagtgaaagggaaggaaaacttagagagaagttagagtttctctcactaaaaaa 629214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 226
Target Start/End: Original strand, 953631 - 953715
Alignment:
Q  142 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    |||||| |||||||||||||  |||||  |||||||||||||||||||   || |||||||  ||||||||||||||||| ||||    
T  953631 aaaaaaagacctaaaaccacttctcctcaatgaatgaaggagaaagaaaacttagagagaatgtggagtttctctcactataaaa 953715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 238
Target Start/End: Original strand, 20988028 - 20988075
Alignment:
Q  191 gttttgagagaagttggagtttctctcactaaaaaattaggaccggct 238  Q
    |||| ||||||||||||||||||||||||||||||| |||| ||||||    
T  20988028 gtttagagagaagttggagtttctctcactaaaaaactagggccggct 20988075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 26276015 - 26276094
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| ||||||||||||  |||||  |||||| |||||||||||| ||||  |||||| || |||||||||||||    
T  26276015 tcaaaaaattacctaaaaccacctctcctcaatgaataaaggagaaagaaagtttacagagaaattagagtttctctcac 26276094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 189
Target Start/End: Original strand, 20465192 - 20465238
Alignment:
Q  143 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaa 189  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  20465192 aaaaatgacataaaaccacccctacttgatgaatgaaggagaaagaa 20465238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 54148855 - 54148793
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaa 202  Q
    |||||||||||||||||||||| |||||| |||  | ||||||||||||| |||| |||||||    
T  54148855 tcaaaaaatgacctaaaaccacccctcctcgattgacgaaggagaaagaaagtttagagagaa 54148793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 9688488 - 9688541
Alignment:
Q  172 tgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 225  Q
    ||||||||| ||||||||  ||| ||||||||||| ||||||||||||||||||    
T  9688488 tgaatgaagaagaaagaaaatttagagagaagttgaagtttctctcactaaaaa 9688541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 238
Target Start/End: Complemental strand, 29921920 - 29921820
Alignment:
Q  140 tcaaaaaatgacct-aaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcact-aaaaaattaggaccggc 237  Q
    |||||||||||||| |||||||| |||||| || ||||||| |||||||||   || |||||||| | |||| ||||| ||| |||||| ||||||||||    
T  29921920 tcaaaaaatgacctaaaaaccacccctcctcgacgaatgaaagagaaagaaaacttagagagaaggtagagtatctcttactaaaaaaactaggaccggc 29921821  T
Q  238 t 238  Q
    |    
T  29921820 t 29921820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 238
Target Start/End: Complemental strand, 29971073 - 29970973
Alignment:
Q  140 tcaaaaaatgacct-aaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcact-aaaaaattaggaccggc 237  Q
    |||||||||||||| |||||||| |||||| || ||||||| |||||||||   || |||||||| | |||| ||||| ||| |||||| ||||||||||    
T  29971073 tcaaaaaatgacctaaaaaccacccctcctcgacgaatgaaagagaaagaaaacttagagagaaggtagagtatctcttactaaaaaaactaggaccggc 29970974  T
Q  238 t 238  Q
    |    
T  29970973 t 29970973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 214
Target Start/End: Complemental strand, 37040635 - 37040575
Alignment:
Q  154 aaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttct 214  Q
    |||||||| ||||||||||||| ||| ||||||||| |||| || ||||||| ||||||||    
T  37040635 aaaaccacccctccttgatgaacgaaagagaaagaaagtttagaaagaagtttgagtttct 37040575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 231
Target Start/End: Original strand, 1803246 - 1803281
Alignment:
Q  196 gagagaagttggagtttctctcactaaaaaattagg 231  Q
    ||||||||||||||||||| ||||||||||||||||    
T  1803246 gagagaagttggagtttctttcactaaaaaattagg 1803281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 133 - 220
Target Start/End: Complemental strand, 7546484 - 7546397
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcact 220  Q
    |||||||||||||| |||||||||| ||| |||||| ||||| |||  |||||||||   || |||||||| | || |||||||||||    
T  7546484 ttctagatcaaaaattgacctaaaatcacccctcctcgatgagtgagagagaaagaaaacttagagagaagattgaatttctctcact 7546397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 231
Target Start/End: Original strand, 21290034 - 21290132
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    |||||| ||||||| |||||||||| |||  |||||  |||| |||| ||| |||||   || ||||||||   |||||||||||||||||||||||||    
T  21290034 ttctaggtcaaaaattgacctaaaatcacctctcctccatgagtgaaagaggaagaaaacttagagagaagacagagtttctctcactaaaaaattagg 21290132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 226
Target Start/End: Original strand, 53808140 - 53808170
Alignment:
Q  196 gagagaagttggagtttctctcactaaaaaa 226  Q
    |||||||||||||||||||||||||||||||    
T  53808140 gagagaagttggagtttctctcactaaaaaa 53808170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 189
Target Start/End: Complemental strand, 4821674 - 4821625
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaa 189  Q
    |||||||||||||||||||||| ||| || || ||||||| |||||||||    
T  4821674 tcaaaaaatgacctaaaaccaccccttctcgacgaatgaaagagaaagaa 4821625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 238
Target Start/End: Original strand, 36910934 - 36910975
Alignment:
Q  197 agagaagttggagtttctctcactaaaaaattaggaccggct 238  Q
    ||||||||||||||||||||||||| |||| |||| ||||||    
T  36910934 agagaagttggagtttctctcactagaaaactagggccggct 36910975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 236
Target Start/End: Original strand, 23800131 - 23800230
Alignment:
Q  140 tcaaaaaatgacctaaaacca--cacctccttgatgaatgaaggagaaagaaggttttgagag-aagttggagtttctctcactaaaaaattaggaccgg 236  Q
    ||||||||| |||||||||||  | |||| | ||||||||||||||||| ||  ||| ||||| || ||| |||||||||||||| |||| |||| ||||    
T  23800131 tcaaaaaataacctaaaaccacccccctcttcgatgaatgaaggagaaaaaaaatttagagagaaatttgaagtttctctcactagaaaactagggccgg 23800230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 161
Target Start/End: Complemental strand, 29239212 - 29239184
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccac 161  Q
    |||||||||||||||||||||||||||||    
T  29239212 ttctagatcaaaaaatgacctaaaaccac 29239184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 226
Target Start/End: Complemental strand, 29249080 - 29249024
Alignment:
Q  170 gatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    ||||| ||||||||||||||   ||  ||||||||| ||||||||||||||||||||    
T  29249080 gatgagtgaaggagaaagaaaaattaaagagaagttagagtttctctcactaaaaaa 29249024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 226
Target Start/End: Complemental strand, 46220543 - 46220459
Alignment:
Q  143 aaaaatgacctaaaaccacacc-tccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    ||||||||||||||||||| || ||||  || ||| || ||||||||| |||| ||||||||||  ||||||| |||||| ||||    
T  46220543 aaaaatgacctaaaaccaccccttcctcaataaataaaagagaaagaaagtttagagagaagttatagtttctatcactagaaaa 46220459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 2e-30; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 120 - 231
Target Start/End: Original strand, 31013771 - 31013882
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| |||||||||||||||||||||| |||||| |||||| ||||||||||||| |||| ||||||||||||||||||||||||    
T  31013771 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctcac 31013870  T
Q  220 taaaaaattagg 231  Q
    || |||| ||||    
T  31013871 tagaaaactagg 31013882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 132 - 231
Target Start/End: Complemental strand, 10377574 - 10377475
Alignment:
Q  132 gttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    ||||||| |||||||||||||||||||||| |||||| |||||| ||||||||||||| |||| |||||||||||||||||||| ||||| |||| ||||    
T  10377574 gttctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctcccactagaaaactagg 10377475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 136 - 226
Target Start/End: Original strand, 27110680 - 27110770
Alignment:
Q  136 tagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    |||||||||||||||||||||||||| | || | |||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||    
T  27110680 tagatcaaaaaatgacctaaaaccacccatcttcgatgaatgaaggagaaagaaagtttagagagaagttggagtttctctcactagaaaa 27110770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 226
Target Start/End: Original strand, 25191279 - 25191372
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    |||||| |||||||||||||||||| |||  ||||| ||||||  |||||||||||| |||| |||||||||||||||||||||||||||||||    
T  25191279 ttctaggtcaaaaaatgacctaaaatcacctctcctcgatgaacaaaggagaaagaaagtttagagagaagttggagtttctctcactaaaaaa 25191372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 143 - 226
Target Start/End: Original strand, 17693836 - 17693919
Alignment:
Q  143 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    |||||||||||||||| || ||||||  ||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  17693836 aaaaatgacctaaaacaacccctcctcaatgaacgaaggagaaagaaagtttagagagaagttggagtttctctcactaaaaaa 17693919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 142 - 235
Target Start/End: Original strand, 8412571 - 8412664
Alignment:
Q  142 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccg 235  Q
    |||||||||||||||||||| ||| || |||||| ||| ||||||||| |||| |||||||||| ||||||||||||||| |||| ||||||||    
T  8412571 aaaaaatgacctaaaaccacccctactcgatgaacgaatgagaaagaaagtttagagagaagttagagtttctctcactagaaaactaggaccg 8412664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 140 - 233
Target Start/End: Original strand, 45446031 - 45446124
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggac 233  Q
    |||||||||||| |||||| || | |||| |||||| ||||||||||||| |||| |||||||||||||||||||||||||| |||| ||||||    
T  45446031 tcaaaaaatgacataaaactacccttcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctcactagaaaactaggac 45446124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 218
Target Start/End: Complemental strand, 37971181 - 37971086
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctca 218  Q
    ||||||||| |  |||||| |||||||||||||||||||||| ||||   ||||||||||| ||||||||  ||| |||||||||||||||||||||||    
T  37971181 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccactcctc---gatgaatgaagaagaaagaaaatttagagagaagttggagtttctctca 37971086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 8981066 - 8980980
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    |||||||||||||||||||||| |||||| || || |||| ||||| |||   || |||||||||||||||||||||||||||||||    
T  8981066 tcaaaaaatgacctaaaaccacccctcctcgacgagtgaatgagaacgaaaacttagagagaagttggagtttctctcactaaaaaa 8980980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 23230512 - 23230430
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaa 223  Q
    ||||||| ||||||||||| || | |||| |||||| ||||||||||||| |||| |||||||||||||||||||||| |||||    
T  23230512 tcaaaaattgacctaaaac-acccatcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctctctaaa 23230430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 225
Target Start/End: Complemental strand, 15344192 - 15344090
Alignment:
Q  123 agagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaa 222  Q
    |||||| || || ||| ||||| |||||||||||||||| |||||| ||||| |||| |||||  ||   || |||||||||||||||||||||||||||    
T  15344192 agaggggtaattttaggtcaaagaatgacctaaaaccacccctcctcgatgagtgaaagagaagaaaaacttagagagaagttggagtttctctcactaa 15344093  T
Q  223 aaa 225  Q
    |||    
T  15344092 aaa 15344090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 225
Target Start/End: Complemental strand, 15433257 - 15433155
Alignment:
Q  123 agagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaa 222  Q
    |||||| || || ||| ||||| |||||||||||||||| |||||| ||||| |||| |||||  ||   || |||||||||||||||||||||||||||    
T  15433257 agaggggtaattttaggtcaaagaatgacctaaaaccacccctcctcgatgagtgaaagagaagaaaaacttagagagaagttggagtttctctcactaa 15433158  T
Q  223 aaa 225  Q
    |||    
T  15433157 aaa 15433155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 225
Target Start/End: Complemental strand, 15524561 - 15524459
Alignment:
Q  123 agagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaa 222  Q
    |||||| || || ||| ||||| |||||||||||||||| |||||| ||||| |||| |||||  ||   || |||||||||||||||||||||||||||    
T  15524561 agaggggtaattttaggtcaaagaatgacctaaaaccacccctcctcgatgagtgaaagagaagaaaaacttagagagaagttggagtttctctcactaa 15524462  T
Q  223 aaa 225  Q
    |||    
T  15524461 aaa 15524459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 3673312 - 3673236
Alignment:
Q  143 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||||||||||||  |||| | ||||||| |||||||||||| |||| ||||||||||| ||||||| ||||    
T  3673312 aaaaatgacctaaaaccaaccctcttcgatgaataaaggagaaagaaagtttagagagaagttgaagtttctttcac 3673236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 219
Target Start/End: Original strand, 7677480 - 7677579
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| |||||||||||||||||||||| ||||||  ||||| |||| ||||||||  ||| ||||||| || |||||| ||||||    
T  7677480 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcaatgaacgaagaagaaagaaaatttagagagaaattagagtttatctcac 7677579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 226
Target Start/End: Original strand, 20559944 - 20560050
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| || |||||||| |||||||||| |||| | |||||| |||| ||||| || |||| |||||||||||| ||||||||| |    
T  20559944 tgtagaggggtgattctaggtccaaaaatgatctaaaaccacccctcatcgatgaacgaagaagaaaaaaagtttagagagaagttggtgtttctctccc 20560043  T
Q  220 taaaaaa 226  Q
    || ||||    
T  20560044 tagaaaa 20560050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 226
Target Start/End: Original strand, 20571506 - 20571612
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| || |||||||| |||||||||| |||| | |||||| |||| ||||| || |||| |||||||||||| ||||||||| |    
T  20571506 tgtagaggggtgattctaggtccaaaaatgatctaaaaccacccctcatcgatgaacgaagaagaaaaaaagtttagagagaagttggtgtttctctccc 20571605  T
Q  220 taaaaaa 226  Q
    || ||||    
T  20571606 tagaaaa 20571612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 226
Target Start/End: Complemental strand, 28897584 - 28897494
Alignment:
Q  136 tagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    |||||||||||||||| ||||||||| |||||| || |||||||| |||| ||  ||||  | |||||||| ||||||||||| |||||||    
T  28897584 tagatcaaaaaatgacttaaaaccacccctcctcgacgaatgaagaagaacgagagtttaaaaagaagttgaagtttctctcattaaaaaa 28897494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 224
Target Start/End: Original strand, 7883463 - 7883544
Alignment:
Q  143 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaa 224  Q
    ||||||||||||||||||| | || | |||||| ||| |||||||||  ||| || |||||||| |||||||||||||||||    
T  7883463 aaaaatgacctaaaaccactcatcatcgatgaacgaatgagaaagaaaatttagaaagaagttgaagtttctctcactaaaa 7883544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 226
Target Start/End: Original strand, 20553458 - 20553551
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    |||||| || |||||||| |||||||||| |||||| |||||| |||| ||||| || ||||  ||||||||||| ||||||||| ||| ||||    
T  20553458 ttctaggtccaaaaatgatctaaaaccacccctcctcgatgaacgaagaagaaaaaaagtttaaagagaagttggtgtttctctccctagaaaa 20553551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 219
Target Start/End: Original strand, 33214853 - 33214930
Alignment:
Q  142 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    |||||| ||||||||||||| | |||| |||||| ||||||||||||| |||| ||||||| ||| ||||| ||||||    
T  33214853 aaaaaaagacctaaaaccacccatcctcgatgaacgaaggagaaagaaagtttagagagaaattgaagtttgtctcac 33214930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 231
Target Start/End: Original strand, 14545123 - 14545215
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac-taaaaaattagg 231  Q
    |||||||||||||||||||||| | ||||| | ||||||||||||||     ||| ||||||||||||||||||||  || ||||||||||||    
T  14545123 tcaaaaaatgacctaaaaccactcatccttaacgaatgaaggagaaattttttttagagagaagttggagtttctcgaacttaaaaaattagg 14545215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 232
Target Start/End: Original strand, 29617677 - 29617769
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagga 232  Q
    ||||||||||||||||||| ||| ||| | ||| | |||| |||||| ||  ||| ||||||||||| | ||||||||||||||||| |||||    
T  29617677 tcaaaaaatgacctaaaacaacatctcttcgataagtgaaagagaaacaaaatttagagagaagttgaaatttctctcactaaaaaactagga 29617769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 226
Target Start/End: Original strand, 40211528 - 40211612
Alignment:
Q  142 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    ||||||| ||||||| |||| |||||| ||| || |||||||||||||  |||  |||||| |||||||||||||||||| ||||    
T  40211528 aaaaaattacctaaagccacccctcctcgattaacgaaggagaaagaaattttaaagagaaattggagtttctctcactagaaaa 40211612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 1236913 - 1236999
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    ||||| |||||||||||||||| ||||||  ||||  ||| ||||| |||   || ||||||||||| |||||||||||||||||||    
T  1236913 tcaaagaatgacctaaaaccacccctcctcaatgagcgaaagagaaggaaaacttagagagaagttgaagtttctctcactaaaaaa 1236999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 235
Target Start/End: Complemental strand, 8867705 - 8867603
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagga 232  Q
    ||||||||||||||||||| ||||| ||| | | || |||| ||||| |||||||||   || |||||||  || ||||||||| ||||||||| |||||    
T  8867705 ttctagatcaaaaaatgacttaaaatcactcatactcgatggatgaaagagaaagaaaacttagagagaatgtgtagtttctctaactaaaaaactagga 8867606  T
Q  233 ccg 235  Q
    |||    
T  8867605 ccg 8867603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 227
Target Start/End: Original strand, 24099484 - 24099567
Alignment:
Q  143 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaat 227  Q
    |||||||||||||| |||| ||| || ||||| |||| |||||||||    | ||||||||||| ||||||||||||||||||||    
T  24099484 aaaaatgacctaaagccac-cctactcgatgattgaaagagaaagaaaacctagagagaagttgaagtttctctcactaaaaaat 24099567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 29937981 - 29937905
Alignment:
Q  143 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    |||||||| |||||||||| | ||||  ||||| |||| |||||||| ||||  |||||| ||||||||||||||||    
T  29937981 aaaaatgatctaaaaccacccatcctcaatgaacgaagtagaaagaaagtttaaagagaaattggagtttctctcac 29937905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 189
Target Start/End: Original strand, 8443743 - 8443789
Alignment:
Q  142 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaa 189  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||||||    
T  8443743 aaaaaatgacctaaaaccacccct-cttgatgaatgaaagagaaagaa 8443789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 8826084 - 8826033
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggaga 184  Q
    ||||||||||||||||||||||||||||| | |||| ||||| |||| ||||    
T  8826084 ttctagatcaaaaaatgacctaaaaccacccatcctcgatgagtgaaagaga 8826033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 41684300 - 41684221
Alignment:
Q  142 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcacta 221  Q
    ||||| ||||||||||||||    |||| ||||||||||||||||||| |  |  || ||||||||||||||||||||||    
T  41684300 aaaaactgacctaaaaccacttaccctttatgaatgaaggagaaagaaagcctaaagggaagttggagtttctctcacta 41684221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 220
Target Start/End: Original strand, 27498565 - 27498635
Alignment:
Q  150 acctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcact 220  Q
    |||||||||| | |||| | |||||||||||||||||||| | ||  ||| |||||| |||||||||||||    
T  27498565 acctaaaaccgcccctcatcgatgaatgaaggagaaagaaagcttaaagataagttgaagtttctctcact 27498635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 36948688 - 36948742
Alignment:
Q  171 atgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 225  Q
    |||||| |||||||||||| ||||  |||||||||| ||||| ||||||||||||    
T  36948688 atgaataaaggagaaagaaagtttaaagagaagttgaagtttgtctcactaaaaa 36948742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 41060482 - 41060534
Alignment:
Q  177 gaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaatta 229  Q
    |||||||||||||  ||| |||||| | || ||||||||||||||||||||||    
T  41060482 gaaggagaaagaaattttagagagatgatgaagtttctctcactaaaaaatta 41060534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 8e-30; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 120 - 238
Target Start/End: Complemental strand, 12170383 - 12170265
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| |||||||||||||||||||||| |||||| |||||| ||||||||||||| || | ||||||||||||||||||||||||    
T  12170383 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtctagagagaagttggagtttctctcac 12170284  T
Q  220 taaaaaattaggaccggct 238  Q
    || |||| |||| ||||||    
T  12170283 tagaaaactagggccggct 12170265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 120 - 231
Target Start/End: Original strand, 33053370 - 33053481
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| |||||||||||||||||||||| |||||| |||||| ||||||||||||| |||| |||||||||||||||||||| |||    
T  33053370 tgtagagggatgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctcccac 33053469  T
Q  220 taaaaaattagg 231  Q
    || |||| ||||    
T  33053470 tagaaaactagg 33053481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 133 - 231
Target Start/End: Original strand, 3913789 - 3913886
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    |||||| |||||||||||||||||||||| |||||| ||||||  |||||||||||| |||| |||||||||||||||||||||||||| |||| ||||    
T  3913789 ttctaggtcaaaaaatgacctaaaaccac-cctcctcgatgaacaaaggagaaagaaagtttagagagaagttggagtttctctcactagaaaactagg 3913886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 68225 - 68320
Alignment:
Q  143 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggct 238  Q
    |||||| |||||||||||  |||||| |||||| ||||||||||||| |||| ||||||||||||||||||||  ||||||||| |||| ||||||    
T  68225 aaaaattacctaaaaccatccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctcctactaaaaaactagggccggct 68320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 142 - 230
Target Start/End: Original strand, 24227936 - 24228024
Alignment:
Q  142 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattag 230  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| || | || |||| ||||||||||||| | || |||||||||||    
T  24227936 aaaaaatgacctaaaaccactcctccttgatgaatgaagaagaaataaagcttggagaaaagttggagtttcgcccattaaaaaattag 24228024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 606077 - 605986
Alignment:
Q  135 ctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    |||| |||||||||||| ||||| ||| |||||| |||||| ||||||||||||| |||| |||| ||||||||||||||| ||||| ||||    
T  606077 ctaggtcaaaaaatgacataaaatcacccctcctcgatgaacgaaggagaaagaaagtttagagaaaagttggagtttctcccactagaaaa 605986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 29255660 - 29255755
Alignment:
Q  136 tagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    ||||||||| |||||| |||||||||| ||| | |||||| ||||||||||||  |||| ||||||||||||| |||||||||||| ||| |||||    
T  29255660 tagatcaaagaatgacataaaaccacatctcttcgatgaacgaaggagaaagagagtttggagagaagttggaatttctctcactagaaagttagg 29255755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 226
Target Start/End: Original strand, 29320064 - 29320173
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagtt---ggagtttctct 216  Q
    ||||||||| |  ||||||||||||| ||||||||||||||| | |||| |||||| ||||||||||||| ||||  |||||||||   |||||||||||    
T  29320064 tgtagaggggtgattctagatcaaaatatgacctaaaaccacccatcctcgatgaacgaaggagaaagaaagtttaaagagaagttggaggagtttctct 29320163  T
Q  217 cactaaaaaa 226  Q
    || |||||||    
T  29320164 cattaaaaaa 29320173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 231
Target Start/End: Original strand, 32328805 - 32328896
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    ||||||| |||| ||||||||| |||||| |||||| ||||||||||||| || | |||||||||| ||||||||||||||| |||| ||||    
T  32328805 tcaaaaactgacttaaaaccacccctcctcgatgaacgaaggagaaagaaagtatagagagaagttagagtttctctcactagaaaactagg 32328896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 120 - 238
Target Start/End: Complemental strand, 23128506 - 23128388
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| ||||||||||||||||||| |  ||||||  ||||| ||||||||||||| |||| |||||||||| ||||||||| |||    
T  23128506 tgtagaggggtgattctaggtcaaaaaatgacctaaaactatccctcctcaatgaacgaaggagaaagaaagtttagagagaagttagagtttctcccac 23128407  T
Q  220 taaaaaattaggaccggct 238  Q
    || || | ||| |||||||    
T  23128406 tagaatactagaaccggct 23128388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 142 - 226
Target Start/End: Original strand, 9723602 - 9723687
Alignment:
Q  142 aaaaaatgacctaaaaccacacctcct-tgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    |||||| ||||||||||||| |||||| ||||||| ||| ||||||||| |||| ||||||||||||||||||| |||||| ||||    
T  9723602 aaaaaaagacctaaaaccacccctcctctgatgaacgaacgagaaagaaagtttagagagaagttggagtttctttcactagaaaa 9723687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 218
Target Start/End: Complemental strand, 30894524 - 30894427
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctca 218  Q
    ||||||||| |  |||||| ||||||||||| |||||||||| |||||| ||| || |||||||||| || |||| ||||||||||| |||||||||||    
T  30894524 tgtagaggggtgattctaggtcaaaaaatgatctaaaaccacccctcctcgattaacgaaggagaaa-aaagtttagagagaagttgaagtttctctca 30894427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 9721761 - 9721830
Alignment:
Q  169 tgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggct 238  Q
    ||||||| ||| ||||||||| |||| |||||||||||||||||||||||||| ||||||| | ||||||    
T  9721761 tgatgaacgaacgagaaagaaagtttagagagaagttggagtttctctcactagaaaattatggccggct 9721830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 32191950 - 32192003
Alignment:
Q  136 tagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaa 189  Q
    |||||||||||| ||||||||||||| ||||||||||||||||| |||||||||    
T  32191950 tagatcaaaaaaggacctaaaaccacccctccttgatgaatgaaagagaaagaa 32192003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 229
Target Start/End: Complemental strand, 32059784 - 32059688
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaatta 229  Q
    |||||| ||||| |||||| |||||||||   |||| |||||||||| ||||||||| ||||  |||||| ||||| |||||||||||| |||||||    
T  32059784 ttctaggtcaaacaatgacttaaaaccacctatcctcgatgaatgaaagagaaagaatgtttaaagagaacttggaatttctctcactagaaaatta 32059688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 225
Target Start/End: Original strand, 7515426 - 7515509
Alignment:
Q  142 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 225  Q
    ||||||| | |||||||||| |||||| |||||| ||| ||||||| | |||| |||||||||||||| ||||||| |||||||    
T  7515426 aaaaaataatctaaaaccacccctcctcgatgaacgaaagagaaagcaagtttagagagaagttggagcttctctctctaaaaa 7515509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 9719643 - 9719693
Alignment:
Q  169 tgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||| ||| ||||||||| |||| ||||||||||||||||||||||||    
T  9719643 tgatgaacgaacgagaaagaaagtttagagagaagttggagtttctctcac 9719693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 225
Target Start/End: Original strand, 4010715 - 4010807
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 225  Q
    |||||| ||||||||||| |||||  ||| ||||||  || ||| ||||||||||||   || |||||||| || ||||||||||||||||||    
T  4010715 ttctaggtcaaaaaatgatctaaagtcactcctcctcaataaataaaggagaaagaaaacttagagagaagatgaagtttctctcactaaaaa 4010807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 34018448 - 34018348
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| ||||||||||||||||||||   | |||| |||||| ||||||||||||| |||| || | || ||| || |||||||||    
T  34018448 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccttccatcctcgatgaacgaaggagaaagaaagtttagacaaaaattgaagcttctctcac 34018349  T
Q  220 t 220  Q
    |    
T  34018348 t 34018348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 231
Target Start/End: Complemental strand, 1523283 - 1523185
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    |||||| ||||||| |||||||||| ||| ||||||| |||  |||| |||||| ||   || |||||||  | ||||||||||||||| |||||||||    
T  1523283 ttctaggtcaaaaattgacctaaaatcacccctccttcatgtgtgaaagagaaataaaacttagagagaatgtagagtttctctcactataaaattagg 1523185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 226
Target Start/End: Original strand, 27097834 - 27097918
Alignment:
Q  142 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    |||||| ||||||||||||| | ||||  |||| |||| |||||||||   || |||||||  || |||||||||||||||||||    
T  27097834 aaaaaaagacctaaaaccactcttcctgaatgagtgaaagagaaagaaaacttagagagaatgtgaagtttctctcactaaaaaa 27097918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 8e-30; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 140 - 238
Target Start/End: Complemental strand, 7036094 - 7035996
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggct 238  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||| |||| |||||||||| ||||||||||||||| |||| |||| ||||||    
T  7036094 tcaaaaaatgacctaaaaccaccccaccttgatgaatgaaggagaaagaaagtttagagagaagtttgagtttctctcactagaaaactagggccggct 7035996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 120 - 238
Target Start/End: Complemental strand, 13007115 - 13006997
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| ||||||||||||||||||||||  ||||| |||||| ||||||||||||| |||| |||||||||||||||||||| |||    
T  13007115 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacctctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctcccac 13007016  T
Q  220 taaaaaattaggaccggct 238  Q
    ||||||| |||| ||||||    
T  13007015 taaaaaactagggccggct 13006997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 120 - 238
Target Start/End: Complemental strand, 38597684 - 38597566
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| ||||||||| |||||||||||| |||||| |||||| ||||||||||||| |||| ||||||||||||||||||||||||    
T  38597684 tgtagaggggtgattctaggtcaaaaaataacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctcac 38597585  T
Q  220 taaaaaattaggaccggct 238  Q
    || |||| |||| ||||||    
T  38597584 tagaaaactagggccggct 38597566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 6012360 - 6012446
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    |||||||||||||||||||||| ||||||  ||||| ||||||||||||| |||| |||||||||||||||||||| ||||||||||    
T  6012360 tcaaaaaatgacctaaaaccacccctcctcaatgaacgaaggagaaagaaagtttagagagaagttggagtttctcccactaaaaaa 6012446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 38007224 - 38007143
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcacta 221  Q
    |||||||||||||||||||||| |||||| |||||| ||||||||||||| |||| |||||||| | |||||||||||||||    
T  38007224 tcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagattgagtttctctcacta 38007143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 140 - 231
Target Start/End: Complemental strand, 25980024 - 25979933
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    |||||||||||||| ||||||| | |||| |||||| ||||||||||||| |||| |||||||||||||||||| ||||||| |||| ||||    
T  25980024 tcaaaaaatgacctgaaaccacccatcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttcgctcactagaaaactagg 25979933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 26878294 - 26878380
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcact 220  Q
    |||||||||||||| |||| |||||||||  ||||| |||||||||||||||||||| |||| ||||||||||| |||||||||||||    
T  26878294 ttctagatcaaaaa-tgacataaaaccacctctcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcact 26878380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 120 - 226
Target Start/End: Original strand, 31391959 - 31392065
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| |||||||||||||||||||||| |||||| |||||| || |||||||||| |||| |||||||||| || ||| ||||||    
T  31391959 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgatggagaaagaaagtttagagagaagttagaatttttctcac 31392058  T
Q  220 taaaaaa 226  Q
    || ||||    
T  31392059 tagaaaa 31392065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 231
Target Start/End: Complemental strand, 26825293 - 26825204
Alignment:
Q  142 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    |||||| ||||||||||||| |||||| |||||| ||||||||||||| |||| ||||||| |||||||||||| ||||| |||| ||||    
T  26825293 aaaaaaagacctaaaaccacccctcctcgatgaaagaaggagaaagaaagtttagagagaaattggagtttctcccactagaaaactagg 26825204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 224
Target Start/End: Complemental strand, 34945295 - 34945204
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaa 224  Q
    |||||| |||||||||||||||||||||  | || | |||||| ||||||||||||| |||| ||||||| |||||||||||| ||||||||    
T  34945295 ttctaggtcaaaaaatgacctaaaaccatccttcttcgatgaacgaaggagaaagaaagtttagagagaatttggagtttctcccactaaaa 34945204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 142 - 231
Target Start/End: Complemental strand, 15571350 - 15571261
Alignment:
Q  142 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    |||||||||| ||||||||   ||||| |||||||||||||||||||| | || |||||||||| ||||||||||||||| |||| ||||    
T  15571350 aaaaaatgacataaaaccatttctcctcgatgaatgaaggagaaagaaagcttggagagaagttagagtttctctcactagaaaactagg 15571261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 133 - 226
Target Start/End: Complemental strand, 7930068 - 7929979
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    |||||| ||||||| |||||||||| ||| |||||||||||||    |||||||||| |||| ||||||| |||||||||||||||||| ||||    
T  7930068 ttctaggtcaaaaattgacctaaaatcacccctccttgatgaa----ggagaaagaaagtttagagagaatttggagtttctctcactagaaaa 7929979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 9113927 - 9114022
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctc 215  Q
    ||||||||| |  |||||| | |||||||||||||||| ||| |||||| |||||| ||| ||||||||| |||| |||||||||| |||||||||    
T  9113927 tgtagaggggtgattctaggttaaaaaatgacctaaaatcacccctcctcgatgaacgaaagagaaagaaagtttagagagaagttagagtttctc 9114022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 231
Target Start/End: Original strand, 11977171 - 11977250
Alignment:
Q  152 ctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    |||||||||| ||| || |||||| ||||||||||||| |||| |||||||||| ||||||||||||||| |||| ||||    
T  11977171 ctaaaaccaccccttctcgatgaacgaaggagaaagaaagtttagagagaagttagagtttctctcactagaaaactagg 11977250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 224
Target Start/End: Complemental strand, 6216761 - 6216676
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaag-ttggagtttctctcactaaaa 224  Q
    ||||| |||||||||||||||| | |||| |||||| ||| |||||| || |||| |||||||| || ||||||||||||||||||    
T  6216761 tcaaagaatgacctaaaaccacccatcctcgatgaacgaatgagaaataaagtttagagagaagttttgagtttctctcactaaaa 6216676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 238
Target Start/End: Original strand, 24230018 - 24230107
Alignment:
Q  150 acctaaaaccacacctccttgatgaatgaaggagaaagaaggtttt-gagagaagttggagtttctctcactaaaaaattaggaccggct 238  Q
    |||||||||| |  ||||| |||||| |||| | |||||| ||||| |||||||||||||||||||||||||| |||| |||| ||||||    
T  24230018 acctaaaacctccactcctcgatgaacgaagaacaaagaaagttttagagagaagttggagtttctctcactagaaaactagggccggct 24230107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 11074124 - 11074199
Alignment:
Q  143 aaaaatgacctaaaaccacac-ctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctc 217  Q
    |||||| |||||||||||| | ||||| |||||| || |||||||||| |||| |||| |||||||||||||||||    
T  11074124 aaaaataacctaaaaccaccctctcctcgatgaacgagggagaaagaaagtttagagaaaagttggagtttctctc 11074199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 231
Target Start/End: Complemental strand, 14211106 - 14211009
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    |||||| ||||||| |||||||||| ||| |||||| ||||| |||| ||| |||||   || ||||||||   |||||||||||||||||||||||||    
T  14211106 ttctaggtcaaaaattgacctaaaatcac-cctcctcgatgagtgaaagaggaagaaaacttagagagaagacagagtttctctcactaaaaaattagg 14211009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 231
Target Start/End: Complemental strand, 39567169 - 39567071
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    |||||| ||||||| |||||||||| ||| |||||| ||||| |||| ||| |||||   ||  |||||||  || |||||||||||||||||||||||    
T  39567169 ttctaggtcaaaaattgacctaaaatcacccctcctcgatgagtgaaagaggaagaaaacttaaagagaagacggtgtttctctcactaaaaaattagg 39567071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 13421779 - 13421711
Alignment:
Q  171 atgaatgaaggagaaagaaggttttgagagaagttggagtttctctcacta-aaaaattaggaccggct 238  Q
    |||||||||| |||||||| ||||  |||||||||| |||||||||||||| ||||| ||||| |||||    
T  13421779 atgaatgaagaagaaagaaagtttaaagagaagttgaagtttctctcactagaaaaactaggatcggct 13421711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 217
Target Start/End: Complemental strand, 35850657 - 35850574
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctc 217  Q
    |||||| |||||||| ||||||||||||| |||||| ||| || ||| |||||| || |||| ||||||| ||||| ||||||||    
T  35850657 ttctaggtcaaaaaa-gacctaaaaccacccctcctcgataaacgaatgagaaataaagtttagagagaaattggactttctctc 35850574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 41630342 - 41630286
Alignment:
Q  175 atgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    ||||| ||||||||| | || ||||||||||| ||||||||||||| ||||||||||    
T  41630342 atgaatgagaaagaaagcttagagagaagttgaagtttctctcactgaaaaattagg 41630286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 238
Target Start/End: Original strand, 8985215 - 8985257
Alignment:
Q  196 gagagaagttggagtttctctcactaaaaaattaggaccggct 238  Q
    ||||||||||||||||||||||||||||||  |||| ||||||    
T  8985215 gagagaagttggagtttctctcactaaaaagctagggccggct 8985257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 4770992 - 4770927
Alignment:
Q  152 ctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctc 217  Q
    |||||| ||| |||||| ||| || |||| |||||||| |||| |||||||||| |||||||||||    
T  4770992 ctaaaatcacccctcctcgattaacgaagaagaaagaaagtttagagagaagttagagtttctctc 4770927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 48
Target Start/End: Original strand, 9113824 - 9113853
Alignment:
Q  19 cagaacgccgcacttagacgacgaaatcac 48  Q
    ||||||||||||||||||||||||||||||    
T  9113824 cagaacgccgcacttagacgacgaaatcac 9113853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 231
Target Start/End: Original strand, 28541122 - 28541219
Alignment:
Q  134 tctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    ||||| ||||||| |||||||||| ||| || ||| ||||| |||| ||| |||||   || ||||||||   |||||||||||||||||||| ||||    
T  28541122 tctaggtcaaaaattgacctaaaatcaccccacctcgatgagtgaaagaggaagaaaacttagagagaagaaagagtttctctcactaaaaaaatagg 28541219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 8e-30; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 120 - 226
Target Start/End: Complemental strand, 2520684 - 2520578
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| |||||||||||||||||||||| |||||| |||||| ||||||||||||| |||| ||||||||||||||||||||||||    
T  2520684 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctcac 2520585  T
Q  220 taaaaaa 226  Q
    || ||||    
T  2520584 tagaaaa 2520578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 133 - 227
Target Start/End: Original strand, 26091128 - 26091222
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaat 227  Q
    |||||| ||||||||| |||||||| ||| | |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26091128 ttctaggtcaaaaaataacctaaaatcactcatcctcgatgaatgaaggagaaagaaggtttagagagaagttggagtttctctcactaaaaaat 26091222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 133 - 238
Target Start/End: Original strand, 26633885 - 26633990
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagga 232  Q
    |||||| |||||||||||||||| ||||| ||||||  ||||| |||| |||||||| |||| ||||||||||||||||||||||||||||||| |||||    
T  26633885 ttctaggtcaaaaaatgacctaagaccacccctcctcaatgaacgaagaagaaagaaagtttagagagaagttggagtttctctcactaaaaaactagga 26633984  T
Q  233 ccggct 238  Q
    ||||||    
T  26633985 ccggct 26633990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 22611068 - 22610972
Alignment:
Q  143 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggctc 239  Q
    ||||||||||||||||||| |||||| || ||| ||||||||||||| |||| |||||||||||||||||||| |||||||||| |||| |||||||    
T  22611068 aaaaatgacctaaaaccacccctcctcgacgaacgaaggagaaagaaagtttagagagaagttggagtttctcccactaaaaaactagggccggctc 22610972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 120 - 231
Target Start/End: Original strand, 4142956 - 4143067
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| |||||||||||||||||||||| |||||| ||||||  |||||||||||| ||||  ||||||||||||||||||| |||    
T  4142956 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacaaaggagaaagaaagtttatagagaagttggagtttctcccac 4143055  T
Q  220 taaaaaattagg 231  Q
    ||||||| ||||    
T  4143056 taaaaaactagg 4143067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 226
Target Start/End: Complemental strand, 10496236 - 10496143
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    |||||| ||||||| ||||||||||||||||||||| |||||| ||||||| ||||| |||| || ||||||||||||||||||||||| ||||    
T  10496236 ttctaggtcaaaaattgacctaaaaccacacctcctcgatgaacgaaggagtaagaaagtttagaaagaagttggagtttctctcactagaaaa 10496143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 143 - 231
Target Start/End: Original strand, 19853736 - 19853824
Alignment:
Q  143 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    ||||||||||||||||||| |||||| |||||||||||| ||||||| |||| |||||||||||||||||||| ||||| |||| ||||    
T  19853736 aaaaatgacctaaaaccacccctcctcgatgaatgaaggggaaagaaagtttagagagaagttggagtttctcccactagaaaactagg 19853824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 140 - 225
Target Start/End: Original strand, 22558687 - 22558772
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 225  Q
    |||||||||||||||||||||| ||||||  ||||| ||||||||||||| |||| ||||||| |||||||||||||| |||||||    
T  22558687 tcaaaaaatgacctaaaaccacccctcctcaatgaacgaaggagaaagaaagtttagagagaaattggagtttctctctctaaaaa 22558772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 143 - 231
Target Start/End: Complemental strand, 13633998 - 13633910
Alignment:
Q  143 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    |||||||||||||||||||  ||||| |||||  ||||||||||||| |||| |||||||||||||||||||||||||| |||| ||||    
T  13633998 aaaaatgacctaaaaccaccactcctcgatgagcgaaggagaaagaaagtttagagagaagttggagtttctctcactagaaaactagg 13633910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 235
Target Start/End: Original strand, 56156782 - 56156870
Alignment:
Q  147 atgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccg 235  Q
    ||||||||||||||| | ||||||||||| |||  |||||||| |||| ||||||||||||||||||||||| ||||||| ||||||||    
T  56156782 atgacctaaaaccacccatccttgatgaacgaataagaaagaaagtttagagagaagttggagtttctctcaataaaaaactaggaccg 56156870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 140 - 231
Target Start/End: Complemental strand, 53810915 - 53810824
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    |||||||||||||||||||||| |||||| |||||| ||||||| ||||| |||| |||||||| ||||||||||| ||||| |||| ||||    
T  53810915 tcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggaggaagaaagtttagagagaagctggagtttctcccactagaaaactagg 53810824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 219
Target Start/End: Complemental strand, 9178251 - 9178165
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    |||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||  ||| |||||||  || ||||||||||||    
T  9178251 ttctaggtcaaaaaatgacctaagaccacccctccttgatgaatgaaggagaaagaaattttagagagaaactgaagtttctctcac 9178165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 54021748 - 54021662
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    |||||||||||||||||||||| |  ||| ||||||||||| |||||||| |||| ||||||| ||| |||||||||||||||||||    
T  54021748 tcaaaaaatgacctaaaaccactctccctcgatgaatgaagaagaaagaaagtttagagagaaattgaagtttctctcactaaaaaa 54021662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 140 - 236
Target Start/End: Complemental strand, 22300732 - 22300636
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccgg 236  Q
    |||||||||||||||||||||| |||||| || || |||| |||||| ||  ||| |||||||||||||||||||||| |||||||| |||| ||||    
T  22300732 tcaaaaaatgacctaaaaccactcctcctcgacgagtgaaagagaaataaaatttagagagaagttggagtttctctctctaaaaaactagggccgg 22300636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 245
Target Start/End: Complemental strand, 5119223 - 5119120
Alignment:
Q  142 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggctcaa 241  Q
    |||||||||| ||||||||| |||||||||||||||||||||||| || |||| || |||||||| | ||| |||||||| |||| |||| ||| | |||    
T  5119223 aaaaaatgacataaaaccacccctccttgatgaatgaaggagaaataaagtttagaaagaagttgaaatttatctcactagaaaactagggccgacacaa 5119124  T
Q  242 gatt 245  Q
    ||||    
T  5119123 gatt 5119120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 231
Target Start/End: Original strand, 48257664 - 48257762
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    |||||| |||||||||||| ||||||||| |||||| |||| | ||| ||||||||| ||||  |||||||||||||||| |||||||| |||| ||||    
T  48257664 ttctaggtcaaaaaatgacataaaaccacccctcctcgatgtacgaatgagaaagaaagtttaaagagaagttggagtttttctcactagaaaactagg 48257762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 142 - 219
Target Start/End: Original strand, 9165267 - 9165344
Alignment:
Q  142 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    |||| |||||||||||||||  ||||| ||||||||| ||| |||||| |||| ||||||||||||||||||||||||    
T  9165267 aaaatatgacctaaaaccacctctcctcgatgaatgatggaaaaagaaagtttagagagaagttggagtttctctcac 9165344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 226
Target Start/End: Complemental strand, 33920937 - 33920853
Alignment:
Q  142 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    |||||||||||||||||||| | | || ||||||||||| |||||||| |||| | || |||||| |||||||||||||||||||    
T  33920937 aaaaaatgacctaaaaccacccattctcgatgaatgaagaagaaagaaagtttagggaaaagttgaagtttctctcactaaaaaa 33920853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 21686465 - 21686560
Alignment:
Q  143 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggct 238  Q
    ||||| ||||| ||||||| |||||| ||||||  |||||||||||| |||| ||||||||||  |||||||||||||| |||| ||||| |||||    
T  21686465 aaaaaagacctcaaaccacccctcctcgatgaacaaaggagaaagaaagtttagagagaagttaaagtttctctcactagaaaactaggatcggct 21686560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 231
Target Start/End: Complemental strand, 35348200 - 35348102
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    |||||| |||||||||||||||||| ||| |||||  |||||  |||||||||| || ||||  |||||||||||||||||| |||||| |||| ||||    
T  35348200 ttctaggtcaaaaaatgacctaaaatcacccctccacgatgagcgaaggagaaaaaaagtttaaagagaagttggagtttctttcactagaaaactagg 35348102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 236
Target Start/End: Complemental strand, 21662371 - 21662276
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccgg 236  Q
    |||||||||||||||||||||| |||||| | ||||||||| ||||||||  ||| |||| || |||||  |||| |||||||||||||| ||||||    
T  21662371 tcaaaaaatgacctaaaaccacccctcctcg-tgaatgaagaagaaagaaattttagagaaaaattggatattctatcactaaaaaattatgaccgg 21662276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 236
Target Start/End: Complemental strand, 21671135 - 21671040
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccgg 236  Q
    |||||||||||||||||||||| |||||| | ||||||||| ||||||||  ||| |||| || |||||  |||| |||||||||||||| ||||||    
T  21671135 tcaaaaaatgacctaaaaccacccctcctcg-tgaatgaagaagaaagaaattttagagaaaaattggatattctatcactaaaaaattatgaccgg 21671040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 51024713 - 51024781
Alignment:
Q  170 gatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggct 238  Q
    |||||| ||||||||||||| || | |||||||||||||||||||||||||  ||||||||| ||||||    
T  51024713 gatgaacgaaggagaaagaaagtatagagagaagttggagtttctctcactggaaaattagggccggct 51024781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 216
Target Start/End: Complemental strand, 43510093 - 43510010
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctct 216  Q
    |||||| |||||||||||||||||||||| | || | |||||| ||||||||| ||| ||||  |||||||||| |||||||||    
T  43510093 ttctaggtcaaaaaatgacctaaaaccacccttcttcgatgaacgaaggagaatgaaagtttaaagagaagttgaagtttctct 43510010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 237
Target Start/End: Complemental strand, 45418433 - 45418319
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| |||||||||||||||||||||   ||||| |||||||| |||||||| ||  ||| ||||||||||| ||||| |||| |    
T  45418433 tgtagagggatgattctaggtcaaaaaatgacctaaaacca---ctcctcgatgaatggaggagaaaaaatttttagagagaagttgaagtttttctcgc 45418337  T
Q  220 taaaaaattaggaccggc 237  Q
    || |||| |||| |||||    
T  45418336 tagaaaactagggccggc 45418319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 231
Target Start/End: Original strand, 51888438 - 51888529
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    |||||||||||||||||||||| |||||| ||||| |||| |||||||||    | |||| |||||| ||||||||||| ||||||| ||||    
T  51888438 tcaaaaaatgacctaaaaccacccctcctcgatgagtgaaagagaaagaaaacgtagagaaaagttgaagtttctctcaataaaaaactagg 51888529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 227
Target Start/End: Original strand, 36204604 - 36204689
Alignment:
Q  142 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaat 227  Q
    |||||||||||||||||||  | |||||||||| |||| |||||||||    | |||||||| ||||||| |||||||||||||||    
T  36204604 aaaaaatgacctaaaaccatccatccttgatgattgaaagagaaagaaaacctagagagaaggtggagttcctctcactaaaaaat 36204689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 235
Target Start/End: Original strand, 29961151 - 29961246
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccg 235  Q
    ||||||||| |||||||| ||  |||| | ||||||  ||||| |||||| |||| ||||||||||||||||||||||| || ||| |||| ||||    
T  29961151 tcaaaaaataacctaaaatcatccctcttcgatgaacaaaggaaaaagaaagtttagagagaagttggagtttctctcattagaaagttagaaccg 29961246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 225
Target Start/End: Complemental strand, 53444010 - 53443928
Alignment:
Q  143 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 225  Q
    ||||||||||||||||||   |||||  ||||| ||| |||||| || |||| ||||||||||| ||||| ||||||||||||    
T  53444010 aaaaatgacctaaaaccaacgctcctcaatgaacgaaagagaaaaaaagtttagagagaagttgaagtttatctcactaaaaa 53443928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 231
Target Start/End: Original strand, 24099295 - 24099384
Alignment:
Q  142 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    ||||||||||||||||||||  ||||| |||||| | || |||||||| |||| ||||||| ||  ||||||| |||||| |||| ||||    
T  24099295 aaaaaatgacctaaaaccacctctcctcgatgaacgtagaagaaagaaagtttagagagaatttaaagtttctttcactagaaaactagg 24099384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 225
Target Start/End: Original strand, 22039013 - 22039105
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 225  Q
    ||||||||| |||| |||||||||||||| ||| || ||||| |||| |||||||||   ||||| | |||||  |||||||||||| |||||    
T  22039013 ttctagatccaaaattgacctaaaaccacccctgctcgatgagtgaaagagaaagaaaactttgaaaaaagttaaagtttctctcacaaaaaa 22039105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 231
Target Start/End: Complemental strand, 27651840 - 27651744
Alignment:
Q  135 ctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    |||| ||||||| |||||||| | ||| |||||| ||||| |||| ||| |||||  ||| ||||||||   || ||||||||||||||||||||||    
T  27651840 ctaggtcaaaaattgacctaacatcacccctcctcgatgagtgaaagaggaagaaaatttagagagaagacagaatttctctcactaaaaaattagg 27651744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 231
Target Start/End: Complemental strand, 32766421 - 32766309
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggtttt-gagagaagttggagtttctctca 218  Q
    ||||||||| |  |||||| |||||||||||||||||||||| ||  ||  ||||| |||||||||| ||  |||| || ||||||||||||||||  ||    
T  32766421 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccaccccctctcaatgaacgaaggagaaaaaattttttagaaagaagttggagtttcttcca 32766322  T
Q  219 ctaaaaaattagg 231  Q
    ||| |||| ||||    
T  32766321 ctagaaaactagg 32766309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 1621719 - 1621805
Alignment:
Q  152 ctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggct 238  Q
    |||||| ||| |||||| ||||| |||| ||| |||||   || ||||||||   ||||||||||||||||||||||||| ||||||    
T  1621719 ctaaaatcacgcctcctcgatgagtgaaagaggaagaaaacttagagagaagacagagtttctctcactaaaaaattagggccggct 1621805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 226
Target Start/End: Complemental strand, 9643208 - 9643178
Alignment:
Q  196 gagagaagttggagtttctctcactaaaaaa 226  Q
    |||||||||||||||||||||||||||||||    
T  9643208 gagagaagttggagtttctctcactaaaaaa 9643178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 47320623 - 47320709
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    ||||| |||||||||||||||| ||| || |||||  ||| ||||| |||   ||  |||||||||| |||||||||||||||||||    
T  47320623 tcaaagaatgacctaaaaccaccccttctcgatgagcgaaagagaaggaaaacttaaagagaagttgaagtttctctcactaaaaaa 47320709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 231
Target Start/End: Complemental strand, 9713786 - 9713697
Alignment:
Q  142 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    |||||| ||| ||||| ||| |||||| ||||| |||| ||||||||    || |||||||| | |||||||||||||||||||| ||||    
T  9713786 aaaaaaagacataaaatcacccctcctcgatgagtgaaagagaaagagaacttagagagaaggtagagtttctctcactaaaaaactagg 9713697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 238
Target Start/End: Complemental strand, 18935681 - 18935576
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagga 232  Q
    |||||| ||||||| |||||| ||| ||| |||||| |||||  ||| ||| |||||   || ||||||||   ||||||||||||||||||| |||||     
T  18935681 ttctaggtcaaaaattgaccttaaatcacccctcctcgatgagcgaaagaggaagaaaacttagagagaagacagagtttctctcactaaaaacttaggg 18935582  T
Q  233 ccggct 238  Q
    ||||||    
T  18935581 ccggct 18935576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 8e-30; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 120 - 238
Target Start/End: Complemental strand, 4778650 - 4778532
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| |||||||||||||||||||||| |||||| |||||| ||||||||||||| |||| || ||||||||||||||||| |||    
T  4778650 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagaaagaagttggagtttctcccac 4778551  T
Q  220 taaaaaattaggaccggct 238  Q
    ||||||| |||| ||||||    
T  4778550 taaaaaactagggccggct 4778532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 120 - 231
Target Start/End: Complemental strand, 7646369 - 7646258
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| |||||||||||||||||||||| |||||| |||||| ||||||||||||| |||| |||||||||||||||||||| |||    
T  7646369 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctcccac 7646270  T
Q  220 taaaaaattagg 231  Q
    || |||| ||||    
T  7646269 tagaaaactagg 7646258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 120 - 238
Target Start/End: Original strand, 12677498 - 12677616
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| |||||||||||||| |||| || |||||| ||||||  |||||||||||| |||| ||||||||||||||||||||||||    
T  12677498 tgtagaggggtgattctaggtcaaaaaatgaccttaaactacccctcctcgatgaacaaaggagaaagaaagtttagagagaagttggagtttctctcac 12677597  T
Q  220 taaaaaattaggaccggct 238  Q
    || |||| |||| ||||||    
T  12677598 tagaaaactagggccggct 12677616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 120 - 221
Target Start/End: Original strand, 7678080 - 7678181
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| |||||||||||||||||||||| |||| | ||| || ||||||||||||| |||| ||||||||||||||||||||||||    
T  7678080 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcatcgatcaacgaaggagaaagaaagtttagagagaagttggagtttctctcac 7678179  T
Q  220 ta 221  Q
    ||    
T  7678180 ta 7678181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 238
Target Start/End: Original strand, 27097620 - 27097725
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagga 232  Q
    |||||| |||||||||||||||||| ||| |||||| |||||| ||||||||||||| |||| |||||||||||||||||||  ||||| |||| ||||     
T  27097620 ttctaggtcaaaaaatgacctaaaatcacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttcttccactagaaaactaggg 27097719  T
Q  233 ccggct 238  Q
    ||||||    
T  27097720 ccggct 27097725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 142 - 226
Target Start/End: Complemental strand, 1421546 - 1421462
Alignment:
Q  142 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||||| |||| | |||||||||||||||||||||||| ||||    
T  1421546 aaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagcgagaagttggagtttctctcactagaaaa 1421462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 120 - 231
Target Start/End: Complemental strand, 7448145 - 7448034
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  ||||||  ||||||||||||||||||||| |||||| |||||| |||||| |||||| |||| |||||||||||||||||||| |||    
T  7448145 tgtagaggggtgattctaggacaaaaaatgacctaaaaccacccctcctcgatgaacgaaggaaaaagaaagtttagagagaagttggagtttctcccac 7448046  T
Q  220 taaaaaattagg 231  Q
    || |||| ||||    
T  7448045 tagaaaactagg 7448034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 120 - 231
Target Start/End: Complemental strand, 31788353 - 31788242
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| ||||||||| |||||||||| |  ||||| |||||| |||| |||||||| |||| ||||||||||||||||||||||||    
T  31788353 tgtagaggggtgattctaggtcaaaaaattacctaaaaccgcctctcctcgatgaacgaagaagaaagaaagtttagagagaagttggagtttctctcac 31788254  T
Q  220 taaaaaattagg 231  Q
    || |||||||||    
T  31788253 tagaaaattagg 31788242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 133 - 238
Target Start/End: Complemental strand, 35220212 - 35220110
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagga 232  Q
    |||||| ||||||||| |||||||||||| ||||   |||||||||||||||||||| |||| |||||| ||||||||||||||||||| |||| ||||     
T  35220212 ttctaggtcaaaaaataacctaaaaccacccctc---gatgaatgaaggagaaagaaagtttagagagaggttggagtttctctcactagaaaactaggg 35220116  T
Q  233 ccggct 238  Q
    ||||||    
T  35220115 ccggct 35220110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 133 - 231
Target Start/End: Complemental strand, 4098987 - 4098889
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    |||||| ||||||||||||||||| |||| | |||| |||||| ||| ||||||||| |||| |||||||||||||||||||| |||||||||| ||||    
T  4098987 ttctaggtcaaaaaatgacctaaagccacccttcctcgatgaaggaaagagaaagaaagtttagagagaagttggagtttctcccactaaaaaactagg 4098889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 133 - 231
Target Start/End: Original strand, 36943339 - 36943437
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    |||||| |||||||||||||||||||||| |||||| ||| || ||||||||||||| |||| |||| || |||||||||||||||||| |||| ||||    
T  36943339 ttctaggtcaaaaaatgacctaaaaccacccctcctcgatcaacgaaggagaaagaaagtttagagataaattggagtttctctcactagaaaactagg 36943437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 133 - 238
Target Start/End: Original strand, 43397334 - 43397439
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagga 232  Q
    |||||| |||||||||||||||||||||| ||| || |||||| |||| | |||||| ||||  ||||||||||||||||||||||||| |||| ||||     
T  43397334 ttctaggtcaaaaaatgacctaaaaccaccccttctcgatgaacgaagaaaaaagaaagtttaaagagaagttggagtttctctcactagaaaactaggg 43397433  T
Q  233 ccggct 238  Q
    ||||||    
T  43397434 ccggct 43397439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 18763365 - 18763265
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| |||||||||||| |||||||||  ||||| |||| ||||||| ||||||| |||| ||||||||||||||||||||||||    
T  18763365 tgtagaggggtgattctaggtcaaaaaatgacataaaaccacctctcctcgatggatgaaggtgaaagaaagtttagagagaagttggagtttctctcac 18763266  T
Q  220 t 220  Q
    |    
T  18763265 t 18763265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 223
Target Start/End: Original strand, 5428084 - 5428173
Alignment:
Q  134 tctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaa 223  Q
    ||||| ||||||| | |||||||||||| |||||| |||||| |||||||||||||  ||| |||||||||||||||||||||| |||||    
T  5428084 tctaggtcaaaaattaacctaaaaccacccctcctcgatgaacgaaggagaaagaaaatttagagagaagttggagtttctctctctaaa 5428173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 227
Target Start/End: Original strand, 9169482 - 9169566
Alignment:
Q  143 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaat 227  Q
    ||||||||||||||||||| |||||| ||| || ||| ||||||||| |||| |||||||||||||||||||| ||||| |||||    
T  9169482 aaaaatgacctaaaaccacccctcctcgataaacgaatgagaaagaaagtttagagagaagttggagtttctcccactagaaaat 9169566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 231
Target Start/End: Original strand, 11985432 - 11985543
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| | |||||||||| |||||||||  ||||| || ||||||| ||||||||| |||| |||||||||||||||||||||||     
T  11985432 tgtagaggggtgattctaggttaaaaaatgacttaaaaccaccactcctcgaagaatgaaagagaaagaaagtttagagagaagttggagtttctctcat 11985531  T
Q  220 taaaaaattagg 231  Q
    || |||| ||||    
T  11985532 tagaaaactagg 11985543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 226
Target Start/End: Original strand, 31128974 - 31129056
Alignment:
Q  144 aaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    |||||||||||||| ||| |||||| ||| || ||||||||||||| |||| ||||||||||| ||||| |||||||||||||    
T  31128974 aaaatgacctaaaatcacccctcctcgatcaacgaaggagaaagaaagtttagagagaagttgaagtttttctcactaaaaaa 31129056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 133 - 213
Target Start/End: Original strand, 37876813 - 37876893
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttc 213  Q
    |||||| ||||||| |||||||||||||| |||||| |||||| |||| |||||||| |||| ||||||||||||| ||||    
T  37876813 ttctaggtcaaaaattgacctaaaaccacccctcctcgatgaacgaagaagaaagaaagtttagagagaagttggaatttc 37876893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 231
Target Start/End: Original strand, 29279794 - 29279883
Alignment:
Q  141 caaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    ||||||||||||||||| | | | |||| ||||||||||| |||||||| | || |||||||||||||||||||||||| | |||||||||    
T  29279794 caaaaaatgacctaaaatcgctcatcctcgatgaatgaag-agaaagaaaggttagagagaagttggagtttctctcacaagaaaattagg 29279883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 230
Target Start/End: Original strand, 42698928 - 42698987
Alignment:
Q  171 atgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattag 230  Q
    |||||| |||||||||||| |||| || |||||||| |||||||||||||||||||||||    
T  42698928 atgaataaaggagaaagaaagtttagaaagaagttgaagtttctctcactaaaaaattag 42698987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 225
Target Start/End: Complemental strand, 41694493 - 41694407
Alignment:
Q  139 atcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 225  Q
    |||||||||||||||||||| ||| || || ||||| ||||||||| |||| | || |||||||| || ||||||||| ||||||||    
T  41694493 atcaaaaaatgacctaaaactacatcttctcgatgagtgaaggagagagaaagcttagagagaaggtgaagtttctcttactaaaaa 41694407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 24461323 - 24461238
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctca 218  Q
    |||||| |||||||||||||||||||||| ||||||| |||| |||| |||||  ||   || |||||||||||||||||| ||||    
T  24461323 ttctaggtcaaaaaatgacctaaaaccacccctccttaatgagtgaaagagaataaaaacttagagagaagttggagtttcactca 24461238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 226
Target Start/End: Complemental strand, 8809156 - 8809073
Alignment:
Q  143 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    |||||||| ||||||||||   |||| || | ||||||||||||||| |||| |||||||||| |||||||||  |||||||||    
T  8809156 aaaaatgatctaaaaccacctgtcctcgacgtatgaaggagaaagaaagtttagagagaagttagagtttctcctactaaaaaa 8809073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 226
Target Start/End: Complemental strand, 36691732 - 36691657
Alignment:
Q  152 ctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagag-aagttggagtttctctcactaaaaaa 226  Q
    |||||||||| ||||||  || || |||||||||||||||||| || || ||||||||||||||||||||| ||||    
T  36691732 ctaaaaccacccctcctcaattaaggaaggagaaagaaggtttagaaagaaagttggagtttctctcactagaaaa 36691657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 4904358 - 4904444
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    |||||||||||| |||||||||  ||| |  || || ||| ||||||||| |||| ||||||||||| ||||||||| |||||||||    
T  4904358 tcaaaaaatgacataaaaccaccactcttcaataaacgaatgagaaagaaagtttagagagaagttgaagtttctcttactaaaaaa 4904444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 238
Target Start/End: Original strand, 23933869 - 23933911
Alignment:
Q  196 gagagaagttggagtttctctcactaaaaaattaggaccggct 238  Q
    |||||||| ||||||| ||||||||||||||||||||||||||    
T  23933869 gagagaaggtggagttactctcactaaaaaattaggaccggct 23933911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 32448843 - 32448929
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    ||||| |||||||||||||||| |||||| ||||| |||| || ||  ||  |||  ||||||||| ||||||||||||||||||||    
T  32448843 tcaaataatgacctaaaaccacccctcctcgatgagtgaaagaaaagaaaaatttaaagagaagttagagtttctctcactaaaaaa 32448929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 189
Target Start/End: Original strand, 36175666 - 36175712
Alignment:
Q  143 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaa 189  Q
    |||||||||||||||||||  || |||||||||||||||||||||||    
T  36175666 aaaaatgacctaaaaccacctcttcttgatgaatgaaggagaaagaa 36175712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 202
Target Start/End: Complemental strand, 38445063 - 38444982
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaa 202  Q
    ||||||||| |  |||||||||||||| ||||||||||||||  ||| | |||||| ||||||||||||| |||| |||||||    
T  38445063 tgtagaggggtgattctagatcaaaaa-tgacctaaaaccacctctcatcgatgaacgaaggagaaagaaagtttagagagaa 38444982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 226
Target Start/End: Original strand, 28871987 - 28872069
Alignment:
Q  142 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    |||||| ||||||||||||| | |||| |||||||||| |||||| ||   || |||||||  ||||||||||||||||||||||    
T  28871987 aaaaaaagacctaaaaccactcatcctcgatgaatgaatgagaaaaaa--attagagagaatgtggagtttctctcactaaaaaa 28872069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 226
Target Start/End: Complemental strand, 37416576 - 37416493
Alignment:
Q  143 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    ||||||||||||||| ||| |||| | || ||||||| || ||| ||  ||| ||||||||||| ||||||||||| |||||||    
T  37416576 aaaaatgacctaaaatcacccctcatcgacgaatgaaagataaaaaaaatttagagagaagttgaagtttctctcattaaaaaa 37416493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 226
Target Start/End: Original strand, 18107951 - 18108044
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    |||||| ||||||||||||||||||||||   ||||  ||||||||| |||||||||   || |||||||  |||| ||||||| ||| |||||    
T  18107951 ttctaggtcaaaaaatgacctaaaaccaccattcctcaatgaatgaaagagaaagaaaacttagagagaaagtggactttctcttacttaaaaa 18108044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 231
Target Start/End: Original strand, 25509291 - 25509379
Alignment:
Q  142 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    |||||| |||||||||||||   |||| |||||| |||| |||||||| | || |||| ||||| |||||| |||||||| |||||||||    
T  25509291 aaaaaaagacctaaaaccaccattcctcgatgaacgaagaagaaagaaag-ttagagaaaagtttgagtttttctcactagaaaattagg 25509379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 4042230 - 4042278
Alignment:
Q  171 atgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||| ||| |||||| || |||| ||||||||||||||||||||||||    
T  4042230 atgaaggaatgagaaaaaaagtttagagagaagttggagtttctctcac 4042278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 120 - 238
Target Start/End: Complemental strand, 15379 - 15261
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| |||||||||||||||||||||| |||||| || ||| ||||||||||||| |||| ||||||||||| ||||||||||||    
T  15379 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgaagaacgaaggagaaagaaagtttagagagaagttgaagtttctctcac 15280  T
Q  220 taaaaaattaggaccggct 238  Q
    || |||| |||| ||||||    
T  15279 tagaaaactagggccggct 15261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 120 - 226
Target Start/End: Original strand, 19404956 - 19405062
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| |||||||||||||||||||||| ||| ||  |||||| ||||||||||||| ||| ||||||||||||||||||||||||    
T  19404956 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccaccccttctcaatgaattaaggagaaagaagatttagagagaagttggagtttctctcac 19405055  T
Q  220 taaaaaa 226  Q
    |||||||    
T  19405056 taaaaaa 19405062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 133 - 226
Target Start/End: Complemental strand, 42978484 - 42978391
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    |||||| |||||||||||||||||||||| |||||| |||||| ||||||||||||| |||| |||||||||| ||||||||||||||| ||||    
T  42978484 ttctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttagagtttctctcactagaaaa 42978391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 133 - 231
Target Start/End: Original strand, 9450352 - 9450450
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    |||||| |||||||||||||||||||||  |||||| |||||| ||||||||||||| ||||  | ||||||||||||||||||||||| |||||||||    
T  9450352 ttctaggtcaaaaaatgacctaaaaccatccctcctcgatgaacgaaggagaaagaaagtttaaaaagaagttggagtttctctcactagaaaattagg 9450450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 140 - 225
Target Start/End: Original strand, 12141530 - 12141615
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 225  Q
    |||||||||||||||||||||| |||| | |||||| ||||||||||||| |||| |||||||||||||||||||||| |||||||    
T  12141530 tcaaaaaatgacctaaaaccacccctcttcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctctctaaaaa 12141615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 120 - 231
Target Start/End: Original strand, 8013667 - 8013778
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| ||||||||||| |||||||||| |||||| ||||||  ||| |||||||| |||| ||||||||||| ||||||||||||    
T  8013667 tgtagaggggtgattctaggtcaaaaaatgatctaaaaccacccctcctcgatgaacaaagaagaaagaaagtttagagagaagttgaagtttctctcac 8013766  T
Q  220 taaaaaattagg 231  Q
    ||||||| ||||    
T  8013767 taaaaaactagg 8013778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 120 - 218
Target Start/End: Original strand, 37837660 - 37837758
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctca 218  Q
    ||||||||| |  |||||| |||||||||||||||||||||| ||||||  ||||| |||||||||| || |||| |||||||||||||||||||||||    
T  37837660 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcaatgaacgaaggagaaataaagtttagagagaagttggagtttctctca 37837758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 233
Target Start/End: Original strand, 30757021 - 30757134
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| ||||||||| |||||||||||| |||||| |||||| ||| |||||||||  ||| ||||||||||| |||||||| |||    
T  30757021 tgtagaggggtgattctaggtcaaaaaattacctaaaaccacccctcctcgatgaacgaaagagaaagaaaatttagagagaagttgaagtttctcccac 30757120  T
Q  220 taaaaaattaggac 233  Q
    ||||||| ||||||    
T  30757121 taaaaaactaggac 30757134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 140 - 225
Target Start/End: Complemental strand, 48061291 - 48061206
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 225  Q
    ||||||||||||||||||||||  ||||| |||||| |||||| |||||| |||| |||||||||||||||||||||| |||||||    
T  48061291 tcaaaaaatgacctaaaaccacctctcctcgatgaacgaaggataaagaaagtttagagagaagttggagtttctctctctaaaaa 48061206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 226
Target Start/End: Original strand, 34899809 - 34899912
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| |||||||||||||||||||||| | ||   | |||| ||||||||||||| |||| |||||||||||||||||||| |||    
T  34899809 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccactcatc---ggtgaacgaaggagaaagaaagtttagagagaagttggagtttctcccac 34899905  T
Q  220 taaaaaa 226  Q
    |||||||    
T  34899906 taaaaaa 34899912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 48317014 - 48317114
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| || ||||||||||||||||||| ||||||||||||| ||||||||||| |  ||| |||||||||| |||||||| ||||    
T  48317014 tgtagaggggtgattctaggtccaaaaatgacctaaaaccacccctccttgatgaacgaaggagaaagcaaatttagagagaagttagagtttctttcac 48317113  T
Q  220 t 220  Q
    |    
T  48317114 t 48317114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 231
Target Start/End: Complemental strand, 4529948 - 4529857
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    |||||||||||||||||| |||  ||| |||||||||||||||||||||||  || |||||||| || |||||||||||||| |||| ||||    
T  4529948 tcaaaaaatgacctaaaatcacctctctttgatgaatgaaggagaaagaagacttagagagaaggtgaagtttctctcactagaaaactagg 4529857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 231
Target Start/End: Complemental strand, 19296767 - 19296656
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| |||||||||||||||||||||| |||||| |||||| |||||| ||| ||   || ||| |||||||||||||||| |||    
T  19296767 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggacaaaaaaaaattagagggaagttggagtttctcccac 19296668  T
Q  220 taaaaaattagg 231  Q
    ||||||| ||||    
T  19296667 taaaaaactagg 19296656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 231
Target Start/End: Original strand, 39171794 - 39171905
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| ||||||||||||||| |||||| |||||| |||||| |||| |||||||| |||| |||| | |||||||||| ||||||    
T  39171794 tgtagaggggtgattctaggtcaaaaaatgacctacaaccacccctcctcgatgaacgaagaagaaagaaagtttagagatacgttggagtttatctcac 39171893  T
Q  220 taaaaaattagg 231  Q
    || |||| ||||    
T  39171894 tagaaaactagg 39171905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 47590180 - 47590085
Alignment:
Q  143 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggct 238  Q
    ||||||||||||||| ||| ||||||  ||||| ||| |||||||||  ||| ||||||||||||| ||||||||||||||||| | |||||||||    
T  47590180 aaaaatgacctaaaatcacccctcctctatgaacgaatgagaaagaaaatttagagagaagttggaatttctctcactaaaaaacttggaccggct 47590085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 120 - 238
Target Start/End: Original strand, 13797133 - 13797251
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| | |||||||||||||||||||  | |||| |||||| ||| |||||||||  |||  |||||||||| ||||||||||||    
T  13797133 tgtagaggggtgattctaggttaaaaaatgacctaaaaccatccatcctcgatgaacgaacgagaaagaaaatttaaagagaagttgaagtttctctcac 13797232  T
Q  220 taaaaaattaggaccggct 238  Q
    || |||| |||||||||||    
T  13797233 tagaaaactaggaccggct 13797251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 238
Target Start/End: Original strand, 39329017 - 39329113
Alignment:
Q  142 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggct 238  Q
    |||||| |||||||| |||| |||||| ||||||  |||||||||||| |||| || | ||||| ||||||||||||||| ||||||||| ||||||    
T  39329017 aaaaaaagacctaaacccactcctcctcgatgaacaaaggagaaagaaagtttagaaaaaagtttgagtttctctcactagaaaattagggccggct 39329113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 235
Target Start/End: Original strand, 25287403 - 25287498
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccg 235  Q
    ||||| ||| || |||||||||  ||| | || |||||||||||||||||  |||  |||||||||  ||||||||||||||||||||||||||||    
T  25287403 tcaaataataacttaaaaccacctctcttcgacgaatgaaggagaaagaaaatttatagagaagttatagtttctctcactaaaaaattaggaccg 25287498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 227
Target Start/End: Original strand, 5078608 - 5078702
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaat 227  Q
    |||||| |||||||||||||||||| ||| | ||||| |||| |||| || |||||    || ||||||||||| ||||||||||||||||||||    
T  5078608 ttctaggtcaaaaaatgacctaaaatcacccttccttaatgagtgaaagataaagagaacttagagagaagttgaagtttctctcactaaaaaat 5078702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 231
Target Start/End: Complemental strand, 40993050 - 40992960
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    ||||||||||||||||||| || | |||| |||||| |||| ||||  || |||| |||||||||||||||||||| ||||| |||| ||||    
T  40993050 tcaaaaaatgacctaaaactac-catcctcgatgaacgaagaagaactaaagtttagagagaagttggagtttctcccactagaaaactagg 40992960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 226
Target Start/End: Original strand, 3224642 - 3224725
Alignment:
Q  143 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    ||||||||||||||||||| | || | || || |||| |||||||||  ||| || | |||||||| |||||||||||||||||    
T  3224642 aaaaatgacctaaaaccacccatcttcgaagagtgaaagagaaagaaaatttagaaaaaagttggaatttctctcactaaaaaa 3224725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 226
Target Start/End: Original strand, 45350445 - 45350500
Alignment:
Q  171 atgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    ||||| |||||||||| || |||| ||||||||||| |||||||||||||| ||||    
T  45350445 atgaacgaaggagaaaaaaagtttagagagaagttgaagtttctctcactagaaaa 45350500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 9916011 - 9915941
Alignment:
Q  142 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagttt 212  Q
    |||||| |||||||||  |  |||||| ||| || ||||||||||||| |||| |||||||||||||||||    
T  9916011 aaaaaaagacctaaaattaaccctcctcgataaacgaaggagaaagaaagtttggagagaagttggagttt 9915941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 9923923 - 9923853
Alignment:
Q  142 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagttt 212  Q
    |||||| |||||||||  |  |||||| ||| || ||||||||||||| |||| |||||||||||||||||    
T  9923923 aaaaaaagacctaaaattaaccctcctcgataaacgaaggagaaagaaagtttggagagaagttggagttt 9923853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 238
Target Start/End: Complemental strand, 24350737 - 24350695
Alignment:
Q  197 agagaagttggagtttctctcactaa-aaaattaggaccggct 238  Q
    |||||||||||||||||||||||||| ||||||||| ||||||    
T  24350737 agagaagttggagtttctctcactaaaaaaattagggccggct 24350695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 49
Target Start/End: Original strand, 19404857 - 19404886
Alignment:
Q  20 agaacgccgcacttagacgacgaaatcact 49  Q
    ||||||||||||||||||||||||||||||    
T  19404857 agaacgccgcacttagacgacgaaatcact 19404886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 24770120 - 24770055
Alignment:
Q  144 aaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggag 209  Q
    |||||||||||||| ||| ||  || |||||| ||| ||||||||| |||| ||||||||||||||    
T  24770120 aaaatgacctaaaatcaccccgtctcgatgaacgaatgagaaagaaagtttagagagaagttggag 24770055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 22087193 - 22087137
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaa 189  Q
    |||||| ||||||||||||| |||||||  |||| | ||| ||||||||||||||||    
T  22087193 ttctaggtcaaaaaatgaccaaaaaccatccctcttcgataaatgaaggagaaagaa 22087137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 120 - 225
Target Start/End: Original strand, 2174 - 2279
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  ||||||||||||||||||| ||||||||| |||||| |||||| |||||||||| || |||| |||||||||||||||||||||| |    
T  2174 tgtagaggggtgattctagatcaaaaaatgacttaaaaccactcctcctcgatgaacgaaggagaaaaaaagtttagagagaagttggagtttctctctc 2273  T
Q  220 taaaaa 225  Q
    ||||||    
T  2274 taaaaa 2279  T

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Target: scaffold0026 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 133 - 238
Target Start/End: Original strand, 72079 - 72184
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagga 232  Q
    |||||| |||||||||||||||||||||| |||||| |||||| ||||||||||||| |||| ||||||||||| |||||||| ||||| |||| ||||     
T  72079 ttctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttgaagtttctcccactagaaaactaggg 72178  T
Q  233 ccggct 238  Q
    ||||||    
T  72179 ccggct 72184  T

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Target: scaffold0445 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 133 - 231
Target Start/End: Complemental strand, 1218 - 1120
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    |||||| ||||||||||||||||||||||  ||||| |||||| |||||||||||||  ||| ||||||||||| |||||| |||||||||||| ||||    
T  1218 ttctaggtcaaaaaatgacctaaaaccacctctcctcgatgaacgaaggagaaagaaaatttagagagaagttgaagtttcactcactaaaaaactagg 1120  T

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Target: scaffold0219 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 133 - 221
Target Start/End: Original strand, 15053 - 15141
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcacta 221  Q
    |||||| ||||||||| ||||||  |||||| |||| |||||||||||||||||||| |||| ||||||| ||||||||||||||||||    
T  15053 ttctaggtcaaaaaataacctaaccccacacatcctcgatgaatgaaggagaaagaaagtttagagagaaattggagtttctctcacta 15141  T

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Target: scaffold0017 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 140 - 231
Target Start/End: Original strand, 32970 - 33061
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    |||||||||||||||||||||| |||||| ||| || |||| |||||||| |||| |||||||||| ||||||||||||||| |||| ||||    
T  32970 tcaaaaaatgacctaaaaccactcctcctcgataaacgaagaagaaagaaagtttagagagaagttagagtttctctcactagaaaactagg 33061  T

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Target: scaffold0088 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 120 - 238
Target Start/End: Complemental strand, 50673 - 50555
Alignment:
Q  120 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 219  Q
    ||||||||| |  |||||| ||||||| |||||||||| ||| ||||||  ||||| ||||||||||||| |||| || ||||||||||||||||| |||    
T  50673 tgtagagggatgattctaggtcaaaaagtgacctaaaatcacccctcctcaatgaacgaaggagaaagaaagtttagaaagaagttggagtttctcccac 50574  T
Q  220 taaaaaattaggaccggct 238  Q
    || |||| |||| ||||||    
T  50573 tagaaaactagggccggct 50555  T

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Target: scaffold0262 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 142 - 222
Target Start/End: Original strand, 2041 - 2121
Alignment:
Q  142 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaa 222  Q
    |||||| ||||||||| |||| |||||  |||||||||| |||||||| ||||||| ||||||||||||||||||||||||    
T  2041 aaaaaaagacctaaaaacacatctcctcaatgaatgaagaagaaagaaagttttgaaagaagttggagtttctctcactaa 2121  T

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Target: scaffold0064 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 231
Target Start/End: Original strand, 19261 - 19348
Alignment:
Q  143 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 231  Q
    ||||| ||| ||||||||| |||||| ||||| |||| |||||||||  ||  ||||||||||||||||||||||||||||||||||||    
T  19261 aaaaacgacataaaaccacccctcctcgatgagtgaaagagaaagaaaatta-gagagaagttggagtttctctcactaaaaaattagg 19348  T

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Target: scaffold0009 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 58301 - 58387
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 226  Q
    |||||||||||||||||||||| |||||| || || |||| || || |||   || |||||||||||||||||||||||||||||||    
T  58301 tcaaaaaatgacctaaaaccacccctcctcgacgagtgaaagaaaacgaaaacttagagagaagttggagtttctctcactaaaaaa 58387  T

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Target: scaffold0603 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 225
Target Start/End: Complemental strand, 7591 - 7500
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 225  Q
    |||||| |||||||||||||||||||||  |||||| ||||||| ||||||||||||   || ||||||||  |||||||| |||||||||||    
T  7591 ttctaggtcaaaaaatgacctaaaaccatccctcctcgatgaataaaggagaaagaaaacttagagagaag-cggagtttccctcactaaaaa 7500  T

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Target: scaffold0554 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 10742 - 10672
Alignment:
Q  144 aaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttct 214  Q
    ||||||||||||||||||  ||||| |||||||||||||| ||| | |||| |||||||||| ||||||||    
T  10742 aaaatgacctaaaaccacctctcctcgatgaatgaaggaggaagcaagtttagagagaagttagagtttct 10672  T

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Target: scaffold0087 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 25551 - 25649
Alignment:
Q  140 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggct 238  Q
    |||||||||||| ||||||||| |||||| |||||| ||||||||||     ||| |||| |||||| |||||||||||||| |||| |||| ||||||    
T  25551 tcaaaaaatgacataaaaccacccctcctcgatgaacgaaggagaaaatttttttagagaaaagttgaagtttctctcactagaaaactagggccggct 25649  T

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Target: scaffold0492 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 12790 - 12721
Alignment:
Q  133 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaa 202  Q
    |||||| ||||||||||||||||||||||  ||||||||||||| || ||||||||| |||  |||||||    
T  12790 ttctaggtcaaaaaatgacctaaaaccacctctccttgatgaatcaaagagaaagaaagttaagagagaa 12721  T

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