View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7323_low_8 (Length: 429)
Name: NF7323_low_8
Description: NF7323
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7323_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 398; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 398; E-Value: 0
Query Start/End: Original strand, 8 - 413
Target Start/End: Original strand, 36606107 - 36606512
Alignment:
| Q |
8 |
ttggtgttgttgaaaatgacgatggtggcggtgatggtgatgagaagtttacgagtgatggagatgttgtagttgatacactgcaagttaatcctttggt |
107 |
Q |
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| T |
36606107 |
ttggtgttgttgaaaatggcgatggtggcggtgatggtgatgagaagtttacgagtgatggagatgttgtagttgatacactgcaagttaatcctttggt |
36606206 |
T |
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| Q |
108 |
ggatggaggtgtcgctgttgtggggggtgaagaggaagttaaggtgtctgaaattgaagaggtagtggcgcctgcacctgttgtgaaccttgataatact |
207 |
Q |
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| T |
36606207 |
ggatggaggtgttgctgttgtggggggtgaagaggaagttaaggtgtctgaaattgaagaggtagtggcgcctgcacctgttgtgaaccttgataatact |
36606306 |
T |
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| Q |
208 |
tttgaacctattgagaaggttggtggggaaggtgtttttgatgtggttggtggtagttttgaatcgtttgagaagggcggtgaaggtgtcgtggatgatg |
307 |
Q |
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| T |
36606307 |
tttgaacctattgagaaggttggtggggaaggtgtttttgatgtggttggtggtagttttgaatcgtttgagaagggcggtgaaggtgtcgtggatgatg |
36606406 |
T |
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| Q |
308 |
aagttgttggtggggatgctgagcctgctggtgttgatgatggtggtgtacgtgagcagacgagtgacattgctcctactgataaggttggcgatgttgt |
407 |
Q |
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| T |
36606407 |
aagttgttggtggggatgctgagcctgctggtgttgatgatggtggtgtacgtgagcagacgagtgacattgctcctactgataaggttggcgatgttgt |
36606506 |
T |
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| Q |
408 |
tgatga |
413 |
Q |
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|||||| |
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| T |
36606507 |
tgatga |
36606512 |
T |
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