View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7324_low_6 (Length: 247)
Name: NF7324_low_6
Description: NF7324
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7324_low_6 |
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Alignment Details
Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 19 - 243
Target Start/End: Complemental strand, 43868542 - 43868318
Alignment:
| Q |
19 |
aatattccaatgaaaaacatcatcacttgtcatgtcaaaaactgattccaaatcatcaagttcttcatccttaacctttaacatttcatttttggatgca |
118 |
Q |
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| T |
43868542 |
aatattccaatgaaaaacatcatcacttgtcatgtcaaaaactgattccaaatcatcaagttcttcatccttaacctttaacatttcacttttggatgca |
43868443 |
T |
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| Q |
119 |
tccatttcattctcttgtttataatcaaacacttgtcctgatgaattctcttgaatctcactactcccaacaccaagtaaactttcaacattagctgcaa |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43868442 |
tccatttcattctcttgtttataatcaaacacttgtcctgatgaattctcttgaatctcactactcccaacaccaagtaaactttcaacattagctgcaa |
43868343 |
T |
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| Q |
219 |
attcagcaagatcaacaccaaactc |
243 |
Q |
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| T |
43868342 |
attcagcaagatcaacatcaaactc |
43868318 |
T |
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